217 results on '"multivariate modelling"'
Search Results
2. Utilising a Clinical Metabolomics LC-MS Study to Determine the Integrity of Biological Samples for Statistical Modelling after Long Term −80 °C Storage: A TOFI_Asia Sub-Study.
- Author
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Joblin-Mills, Aidan, Wu, Zhanxuan E., Sequeira-Bisson, Ivana R., Miles-Chan, Jennifer L., Poppitt, Sally D., and Fraser, Karl
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METABOLOMICS ,STATISTICAL sampling ,STATISTICAL models ,CULTURAL pluralism ,ETHNIC discrimination - Abstract
Biological samples of lipids and metabolites degrade after extensive years in −80 °C storage. We aimed to determine if associated multivariate models are also impacted. Prior TOFI_Asia metabolomics studies from our laboratory established multivariate models of metabolic risks associated with ethnic diversity. Therefore, to compare multivariate modelling degradation after years of −80 °C storage, we selected a subset of aged (≥5-years) plasma samples from the TOFI_Asia study to re-analyze via untargeted LC-MS metabolomics. Samples from European Caucasian (n = 28) and Asian Chinese (n = 28) participants were evaluated for ethnic discrimination by partial least squares discriminative analysis (PLS–DA) of lipids and polar metabolites. Both showed a strong discernment between participants ethnicity by features, before (Initial) and after (Aged) 5-years of −80 °C storage. With receiver operator characteristic curves, sparse PLS–DA derived confusion matrix and prediction error rates, a considerable reduction in model integrity was apparent with the Aged polar metabolite model relative to Initial modelling. Ethnicity modelling with lipids maintained predictive integrity in Aged plasma samples, while equivalent polar metabolite models reduced in integrity. Our results indicate that researchers re-evaluating samples for multivariate modelling should consider time at −80 °C when producing predictive metrics from polar metabolites, more so than lipids. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. Modeling Asymmetric Dependence Structure of Air Pollution Characteristics: A Vine Copula Approach.
- Author
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Ismail, Mohd Sabri, Masseran, Nurulkamal, Alias, Mohd Almie, and Abu Bakar, Sakhinah
- Subjects
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AIR pollution , *DISTRIBUTION (Probability theory) , *DEPENDENCE (Statistics) , *VITIS vinifera , *CLIMBING plants - Abstract
Contaminated air is unhealthy for people to breathe and live in. To maintain the sustainability of clean air, air pollution must be analyzed and controlled, especially after unhealthy events. To do so, the characteristics of unhealthy events, namely intensity, duration, and severity are studied using multivariate modeling. In this study, the vine copula approach is selected to study the characteristics data. Vine copula is chosen here because it is more potent than the standard multivariate distributions, and multivariate copulas, especially in modeling the tails related to extreme events. Here, all nine different vine copulas are analyzed and compared based on model fitting and the comparison of models. In model fitting, the best model obtained is Rv123-Joint-MLE, a model with a root nodes sequence of 123, and optimized using the joint maximum likelihood. The components for the best model are the Tawn type 1 and Rotated Tawn type 1 180 degrees representing the pair copulas of (intensity, duration), and (intensity, severity), respectively, with the Survival Gumbel for the conditional pair copula of (duration, severity; intensity). Based on the best model, the tri-variate dependence structure of the intensity, duration, and severity relationship is positively correlated, skewed, and follows an asymmetric distribution. This indicates that the characteristic's, including intensity, duration, and severity, tend to increase together. Using comparison tests, the best model is significantly different from others, whereas only two models are quite similar. This shows that the best model is well-fitted, compared to most models. Overall, this paper highlights the capability of vine copula in modeling the asymmetric dependence structure of air pollution characteristics, where the obtained model has a better potential to become a tool to assess the risks of extreme events in future work. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
4. Utilising a Clinical Metabolomics LC-MS Study to Determine the Integrity of Biological Samples for Statistical Modelling after Long Term −80 °C Storage: A TOFI_Asia Sub-Study
- Author
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Aidan Joblin-Mills, Zhanxuan E. Wu, Ivana R. Sequeira-Bisson, Jennifer L. Miles-Chan, Sally D. Poppitt, and Karl Fraser
- Subjects
frozen ,−80 °C storage ,lipidomics ,metabolomics ,multivariate modelling ,predictions ,Microbiology ,QR1-502 - Abstract
Biological samples of lipids and metabolites degrade after extensive years in −80 °C storage. We aimed to determine if associated multivariate models are also impacted. Prior TOFI_Asia metabolomics studies from our laboratory established multivariate models of metabolic risks associated with ethnic diversity. Therefore, to compare multivariate modelling degradation after years of −80 °C storage, we selected a subset of aged (≥5-years) plasma samples from the TOFI_Asia study to re-analyze via untargeted LC-MS metabolomics. Samples from European Caucasian (n = 28) and Asian Chinese (n = 28) participants were evaluated for ethnic discrimination by partial least squares discriminative analysis (PLS–DA) of lipids and polar metabolites. Both showed a strong discernment between participants ethnicity by features, before (Initial) and after (Aged) 5-years of −80 °C storage. With receiver operator characteristic curves, sparse PLS–DA derived confusion matrix and prediction error rates, a considerable reduction in model integrity was apparent with the Aged polar metabolite model relative to Initial modelling. Ethnicity modelling with lipids maintained predictive integrity in Aged plasma samples, while equivalent polar metabolite models reduced in integrity. Our results indicate that researchers re-evaluating samples for multivariate modelling should consider time at −80 °C when producing predictive metrics from polar metabolites, more so than lipids.
- Published
- 2024
- Full Text
- View/download PDF
5. Hybrid treatment verification based on prompt gamma rays and fast neutrons: multivariate modelling for proton range determination
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Sonja M. Schellhammer, Ilker Meric, Steffen Löck, and Toni Kögler
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proton therapy ,treatment verification ,prompt gamma ray ,fast neutron ,machine learning ,multivariate modelling ,Physics ,QC1-999 - Abstract
Robust and fast in vivo treatment verification is expected to increase the clinical efficacy of proton therapy. The combined detection of prompt gamma rays and neutrons has recently been proposed for this purpose and shown to increase the monitoring accuracy. However, the potential of this technique is not fully exploited yet since the proton range reconstruction relies only on a simple landmark of the particle production distributions. Here, we apply machine learning based feature selection and multivariate modelling to improve the range reconstruction accuracy of the system in an exemplary lung cancer case in silico. We show that the mean reconstruction error of this technique is reduced by 30%–50% to a root mean squared error per spot of 0.4, 1.0, and 1.9 mm for pencil beam scanning spot intensities of 108, 107, and 106 initial protons, respectively. The best model performance is reached when combining distribution features of both gamma rays and neutrons. This confirms the advantage of hybrid gamma/neutron imaging over a single-particle approach in the presented setup and increases the potential of this system to be applied clinically for proton therapy treatment verification.
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- 2023
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6. Estimation of the influence of fracture parameters uncertainty on the dynamics of technological development indicators of the Tournaisian-Famennian oil reservoir in Sukharev oil field
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Aleksanr A. Kochnev, Nikita D. Kozyrev, and Sergei N. Krivoshchekov
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uncertainty parameters ,multivariate modelling ,reservoir history matching ,forecast of technological development parameters ,sensitivity analysis ,fracturing parameters ,Mining engineering. Metallurgy ,TN1-997 - Abstract
Issues related to the influence of reservoir properties uncertainty on oil field development modelling are considered. To increase the reliability of geological-hydrodynamic mathematical model in the course of multivariate matching, the influence of reservoir properties uncertainty on the design technological parameters of development was estimated, and their mutual influence was determined. The optimal conditions for the development of the deposit were determined, and multivariate forecasts were made. The described approach of history matching and calculation of the forecast of technological development indicators allows to obtain a more reliable and a less subjective history match as well as to increase the reliability of long-term and short-term forecasts.
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- 2022
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7. Impact of Interventional Policies Including Vaccine on COVID-19 Propagation and Socio-economic Factors: Predictive Model Enabling Simulations Using Machine Learning and Big Data
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Wu, Haonan, Banerjee, Rajarshi, Venkatachalam, Indhumathi, Chougale, Praveen, Kacprzyk, Janusz, Series Editor, Gomide, Fernando, Advisory Editor, Kaynak, Okyay, Advisory Editor, Liu, Derong, Advisory Editor, Pedrycz, Witold, Advisory Editor, Polycarpou, Marios M., Advisory Editor, Rudas, Imre J., Advisory Editor, Wang, Jun, Advisory Editor, and Arai, Kohei, editor
- Published
- 2022
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8. Moisture- and mould-resistance: multi-modal modelling leveraging X-ray tomography in edge-sealed cross-laminated timber
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Dietrich Buck, Petter Wallentén, Margot Sehlstedt-Persson, and Micael Öhman
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CT scan ,Full-field data ,Image processing ,Moisture simulation ,Mould estimation ,Multivariate modelling ,Materials of engineering and construction. Mechanics of materials ,TA401-492 - Abstract
Edge-sealing, which involves treating the edges of wood products, improves water resistance. This study investigated the feasibility of edge-sealed cross-laminated timber (CLT) panels to reduce capillary water uptake, thereby resisting mould formation. The water and vapour permeabilities of ten characteristically different single-layer sealant coating systems were systematically determined. Multi-modal assessment leveraged by computed tomography (CT) scanning methodology was used to enhance detection of material characteristics beyond the standard coating permeability assessment. Moisture content was observed to change during the specimens’ absorption and desorption depending on the sealant system applied. The results revealed different characteristics of coatings during the water absorption and desorption stages. Findings from this study were used to develop recommendations regarding the water resistance of coating systems, curing time, susceptibility to mould formation, and industrial applicability. Results suggest that edge-sealed CLT could minimise the risk of mould formation, which can occur at worksites with minimal weather protection. The method developed in this study provides a basis to evaluate new coating systems and determine which use case is the best for a particular coating type. This study also incorporates insights from industry to identify future research orientations, which may pave the way for new designs and assessment techniques.
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- 2023
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9. Directional sensitivity of dynamic cerebral autoregulation during spontaneous fluctuations in arterial blood pressure at rest.
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Panerai, Ronney B, Barnes, Sam C, Batterham, Angus P, Robinson, Thompson G, and Haunton, Victoria J
- Abstract
Directional sensitivity, the more efficient response of cerebral autoregulation to increases, compared to decreases, in mean arterial pressure (MAP), has been demonstrated with repeated squat-stand maneuvers (SSM). In 43 healthy subjects (26 male, 23.1 ± 4.2 years old), five min. recordings of cerebral blood velocity (bilateral Doppler ultrasound), MAP (Finometer), end-tidal CO2 (capnograph), and heart rate (ECG) were obtained during sitting (SIT), standing (STA) and SSM. A new analytical procedure, based on autoregressive-moving average models, allowed distinct estimates of the autoregulation index (ARI) by separating the MAP signal into its positive (MAP+D) and negative (MAP−D) derivatives. ARI+D was higher than ARI−D (p < 0.0001), SIT: 5.61 ± 1.58 vs 4.31 ± 2.16; STA: 5.70 ± 1.24 vs 4.63 ± 1.92; SSM: 4.70 ± 1.11 vs 3.31 ± 1.53, but the difference ARI+D–ARI−D was not influenced by the condition. A bootstrap procedure determined the critical number of subjects needed to identify a significant difference between ARI+D and ARI−D, corresponding to 24, 37 and 38 subjects, respectively, for SSM, STA and SIT. Further investigations are needed on the influences of sex, aging and other phenotypical characteristics on the phenomenon of directional sensitivity of dynamic autoregulation. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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10. Multivariate statistical modelling to improve particle treatment verification: Implications for prompt gamma-ray timing
- Author
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Sonja M. Schellhammer, Julia Wiedkamp, Steffen Löck, and Toni Kögler
- Subjects
proton therapy ,treatment verification ,prompt gamma-ray timing ,machine learning ,multivariate modelling ,Physics ,QC1-999 - Abstract
We present an improved method for in-vivo proton range verification by prompt gamma-ray timing based on multivariate statistical modelling. To this end, prompt gamma-ray timing distributions acquired during pencil beam irradiation of an acrylic glass phantom with air cavities of different thicknesses were analysed. Relevant distribution features were chosen using forward variable selection and the Least Absolute Shrinkage and Selection Operator (LASSO) from a feature assortment based on recommendations of the Image Biomarker Standardisation Initiative. Candidate models were defined by multivariate linear regression and evaluated based on their coefficient of determination R2 and root mean square error RMSE. The newly developed models showed a clearly improved predictive power (R2 > 0.7) compared to the previously used models (R2 < 0.5) and allowed for the identification of introduced air cavities in a scanned treatment field. These results demonstrate that elaborate statistical models can enhance prompt gamma-ray based treatment verification and increase its potential for routine clinical application.
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- 2022
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11. Multivariate hierarchical analysis of car crashes data considering a spatial network lattice.
- Author
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Gilardi, Andrea, Mateu, Jorge, Borgoni, Riccardo, and Lovelace, Robin
- Subjects
TRAFFIC accidents ,MULTIVARIATE analysis ,METROPOLIS ,TRAFFIC flow ,ROAD safety measures - Abstract
Road traffic casualties represent a hidden global epidemic, demanding evidence‐based interventions. This paper demonstrates a network lattice approach for identifying road segments of particular concern, based on a case study of a major city (Leeds, UK), in which 5862 crashes of different severities were recorded over an 8‐year period (2011–2018). We consider a family of Bayesian hierarchical models that include spatially structured and unstructured random effects to capture the dependencies between the severity levels. Results highlight roads that are more prone to collisions, relative to estimated traffic volumes, in the north‐west and south of city centre. We analyse the modifiable areal unit problem (MAUP), proposing a novel procedure to investigate the presence of MAUP on a network lattice. We conclude that our methods enable a reliable estimation of road safety levels to help identify 'hotspots' on the road network and to inform effective local interventions. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
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12. A Multivariate Model to Predicting Vibration Features for Equipment Prognosis.
- Author
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Kolawole, A. and Ekoh, C. O.
- Subjects
REMAINING useful life ,RESOURCE allocation ,LINEAR programming ,PREDICTION models ,PROGNOSIS ,UNIVARIATE analysis - Abstract
Vibration analysis, a vital tool in the scheduling of equipment for maintenance is used to assess the useful life of equipment for allocation of resources to mitigate downtime. Compared to previous approaches of univariate prediction, this study presents a more practical model by employing vibration analysis data as a multivariate problem in predicting the remaining useful life (RUL) of an equipment. Applying the model, Multiple Linear Regression (MLR) and Linear Programming (LP) were explored to determine the deterioration rate and the RUL of the equipment. The results showed that the MLR had a high predictive accuracy on the data sets. Furthermore, a p-value of 1.546e-06 and Multiple R-squared value of 0.8215 were obtained showing that the MLR appears to be a good prediction model. From the solution of the LP formulation, the RUL of the equipment was 181 days. These results closely matched the historical data of the equipment which implied this model could be used for planning of maintenance activity for this equipment and any similar equipment. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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13. Factors associated with the experience of patients presenting in pain to the emergency department.
- Author
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Hughes, James A., Alexander, Kimberley E., Spencer, Lyndall, and Yates, Patsy
- Subjects
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PAIN , *HOSPITAL emergency services , *HEALTH facilities , *MULTIPLE regression analysis , *EFFECT sizes (Statistics) , *PATIENTS , *HEALTH outcome assessment , *PATIENT satisfaction , *EMERGENCY medical services , *QUESTIONNAIRES , *STATISTICAL sampling , *LONGITUDINAL method - Abstract
Aims and Objectives: This study aims to examine the association between person, environment, health and illness factors, pain care and the patient experience in the emergency department, guided by symptom management theory. Background: Current outcome measures of pain care in the emergency department focus on process measures such as the time taken to deliver analgesic medication. Patient‐reported outcomes of pain care are rare in emergency department literature and predominantly focus on patient satisfaction. Measuring overall patient experience is common, with extensive surveys undertaken in the United Kingdom, United States of America and Australia; however, these are not used as an outcome of pain care. Design: Prospective cohort study. Methods: One hundred and ninety patients arriving at a large, inner‐city adults‐only emergency department in moderate to severe pain were recruited to answer a modified version of the emergency department patient experience of care survey. Results: Fifteen factors were identified as influencing the patient experience of care when presenting in pain. These influences of patient experience included the emergency department environment, time to first analgesic medication and the provision of analgesic medication. Conclusions: In addition to pain care factors, there is a significant association between the emergency department environment—especially workload, throughput and patient placement—and the experience of patients who present in pain to the emergency department. Relevance to Clinical Practice: This study demonstrated an association between time to first analgesic medication and the patient experience of care. Providing timely care, including pain care, in emergency departments is difficult, but necessary to improve the patient experience of care. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
14. Multivariate Analysis and Modelling of multiple Brain endOphenotypes: Let’s MAMBO!
- Author
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Natalia Vilor-Tejedor, Diego Garrido-Martín, Blanca Rodriguez-Fernandez, Sander Lamballais, Roderic Guigó, and Juan Domingo Gispert
- Subjects
Imaging genetics ,Multiple phenotypes ,Multivariate modelling ,Neuroimaging ,Genetics ,Image-derived phenotype ,Biotechnology ,TP248.13-248.65 - Abstract
Imaging genetic studies aim to test how genetic information influences brain structure and function by combining neuroimaging-based brain features and genetic data from the same individual.Most studies focus on individual correlation and association tests between genetic variants and a single measurement of the brain. Despite the great success of univariate approaches, given the capacity of neuroimaging methods to provide a multiplicity of cerebral phenotypes, the development and application of multivariate methods become crucial.In this article, we review novel methods and strategies focused on the analysis of multiple phenotypes and genetic data. We also discuss relevant aspects of multi-trait modelling in the context of neuroimaging data.
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- 2021
- Full Text
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15. On the multivariate analysis of animal networks
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Mlynski, David, James, Richard, and Priest, Nicholas
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591.5 ,network analysis ,null models ,animal behaviour ,evolution ,multivariate analysis ,Multivariate modelling ,randomisation ,networks - Abstract
From the individual to species level, it is common for animals to have connections with one another. These connections can exist in a variety of forms; from the social relationships within an animal society, to hybridisation between species. The structure of these connections in animal systems can be depicted using networks, often revealing non-trivial structure which can be biologically informative. Understanding the factors which drive the structure of animal networks can help us understand the costs and benefits of forming and maintaining relationships. Multivariate modelling provides a means to evaluate the relative contributions of a set of explanatory factors to a response variable. However, conventional modelling approaches use statistical tests which are unsuitable for the dependencies inherent in network and relational data. A solution to this problem is to use specialised models developed in the social sciences, which have a long history in modelling human social networks. Taking predictive multivariate models from the social sciences and applying them to animal networks is attractive given that current analytical approaches are predominantly descriptive. However, these models were developed for human social networks, where participants can self-identify relationships. In contrast, relationships between animals have to be inferred through observations of associations or interactions, which can introduce sampling bias and uncertainty to the data. Without appropriate care, these issues could lead us to make incorrect or overconfident conclusions about our data. In this thesis, we use an established network model, the multiple regression quadratic assignment procedure (MRQAP), and propose approaches to facilitate the application of this model in animal network studies. Through demonstrating these approaches on three animal systems, we make new biological findings and highlight the importance of considering data-sampling issues when analysing networks. Additionally, our approaches have wider applications to animal network studies where relationships are inferred through observing dyadic interactions.
- Published
- 2016
16. Modelling students' performance in MOOCs: a multivariate approach.
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Carannante, Maria, Davino, Cristina, and Vistocco, Domenico
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MASSIVE open online courses , *EDUCATIONAL resources , *DIGITIZATION , *LEARNING , *HIGHER education - Abstract
Massive Open Online Courses, universally labelled as MOOCs, become more and more relevant in the era of digitalization of higher education. The availability of free education resources without access restrictions for a plenty of potential users has changed the learning market in a way unthinkable only few decades ago. This form of web-based education allows to track all the actions of the students, thus providing an information base to understand how students' behaviour can influence their performance. The paper proposes a structural equation model in the framework of the component-based approach to measure which are the main factors affecting students' performance (Partial Least Squares Path Modelling). The novelty of the approach is the simultaneous analysis of more than one factor that exerts an impact on the performance. The analysis is carried out on the log data of a course available on the edX MOOCs platform named FedericaX. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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17. Factors associated with time to first analgesic medication in the emergency department.
- Author
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Hughes, James A., Alexander, Kimberly E., Spencer, Lyndall, and Yates, Patsy
- Subjects
- *
KRUSKAL-Wallis Test , *HOSPITAL emergency services , *PAIN , *TIME , *ANALGESICS , *RETROSPECTIVE studies , *MANN Whitney U Test , *SOCIOECONOMIC factors , *THEORY , *CHI-squared test , *DESCRIPTIVE statistics , *PAIN management , *PROPORTIONAL hazards models , *DISCHARGE planning - Abstract
Aim and Objective: To examine the factors associated with time to first analgesic medication in the emergency department. Background: Pain is the most common symptom presenting to the emergency department, and the time taken to deliver analgesic medication is a common outcome measure. Factors associated with time to first analgesic medication are likely to be multifaceted, but currently poorly described. Design: Retrospective cohort study. Methods: Cox proportional hazards regression modelling was undertaken to evaluate the associations between person, environment, health and illness variables within Symptom Management Theory and time to first analgesic medication in a sample of adult patients presenting with moderate‐to‐severe pain to an emergency department over twelve months. This study was completed in line with the STROBE statement. Results: 383 patients were included in the study, 290 (75.92%) of these patients received an analgesic medication in a median time of 45 minutes (interquartile range, 70 minutes). A model containing nine explanatory variables associated with time to first analgesic medication was identified. These nine variables (employment status, discharge location, triage score, Charlson score, arrival pain score, socio‐economic status, first location, daily total treatment time and patient time to be seen) represent all of the domains of the Symptom Management Theory. Conclusions: Person, environment, health and illness factors are associated with the time taken to deliver analgesic medication to those in pain in the emergency department. This study demonstrates the complexity of factors associated with pain care and the applicability of Symptom Management Theory to pain care in the emergency department. Relevance to Clinical Practice: Identifying a model of factors that are associated with the time in which the most common symptom presenting to the emergency department is treated allows for targeted interventions to groups likely to receive poor care and a framework for its evaluation. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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18. Resource Model Updating For Compositional Geometallurgical Variables.
- Author
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Prior, Ángel, Tolosana-Delgado, Raimon, van den Boogaart, K. Gerald, and Benndorf, Jörg
- Abstract
In the field of mineral resources extraction, one main challenge is to meet production targets in terms of geometallurgical properties. These properties influence the processing of the ore and are often represented in resource modeling by coregionalized variables with a complex relationship between them. Valuable data are available about geometalurgical properties and their interaction with the beneficiation process given sensor technologies during production monitoring. The aim of this research is to update resource models as new observations become available. A popular method for updating is the ensemble Kalman filter. This method relies on Gaussian assumptions and uses a set of realizations of the simulated models to derive sample covariances that can propagate the uncertainty between real observations and simulated ones. Hence, the relationship among variables has a compositional nature, such that updating these models while keeping the compositional constraints is a practical requirement in order to improve the accuracy of the updated models. This paper presents an updating framework for compositional data based on ensemble Kalman filter which allows us to work with compositions that are transformed into a multivariate Gaussian space by log-ratio transformation and flow anamorphosis. This flow anamorphosis, transforms the distribution of the variables to joint normality while reasonably keeping the dependencies between components. Furthermore, the positiveness of those variables, after updating the simulated models, is satisfied. The method is implemented in a bauxite deposit, demonstrating the performance of the proposed approach. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
19. Climatic and evolutionary contexts are required to infer plant life history strategies from functional traits at a global scale.
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Kelly, Ruth, Healy, Kevin, Anand, Madhur, Baudraz, Maude E. A., Bahn, Michael, Cerabolini, Bruno E. L., Cornelissen, Johannes H. C., Dwyer, John M., Jackson, Andrew L., Kattge, Jens, Niinemets, Ülo, Penuelas, Josep, Pierce, Simon, Salguero‐Gómez, Roberto, Buckley, Yvonne M., and Levine, Jonathan
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LIFE history theory , *ENDANGERED species , *PLANT mortality , *EXTINCTION (Psychology) , *AGE distribution , *LIFE spans - Abstract
Life history strategies are fundamental to the ecology and evolution of organisms and are important for understanding extinction risk and responses to global change. Using global datasets and a multiple response modelling framework we show that trait‐climate interactions are associated with life history strategies for a diverse range of plant species at the global scale. Our modelling framework informs our understanding of trade‐offs and positive correlations between elements of life history after accounting for environmental context and evolutionary and trait‐based constraints. Interactions between plant traits and climatic context were needed to explain variation in age at maturity, distribution of mortality across the lifespan and generation times of species. Mean age at maturity and the distribution of mortality across plants' lifespan were under evolutionary constraints. These findings provide empirical support for the theoretical expectation that climatic context is key to understanding trait to life history relationships globally. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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20. Consistent after all: behavioural repeatability in a long-lived lizard across a 6-year field study.
- Author
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Payne, E., Sinn, D.L., Spiegel, O., Leu, S.T., Gardner, M.G., Godfrey, S.S., Wohlfeil, C., and Sih, A.
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LIZARDS , *STATISTICAL reliability , *FIELD research , *INDIVIDUAL differences , *PSYCHOLOGICAL adaptation , *CASTOR bean tick , *LINEAR statistical models - Abstract
Despite growing attention to the ecological and evolutionary importance of consistent individual differences in behaviour (animal personality), long-term field studies quantifying factors associated with behavioural repeatability remain rare. Here, we studied animal personalities over an 8-year period, representing 6 study years, in a wild population of the long-lived sleepy lizard, Tiliqua rugosa. Using Bayesian generalized linear mixed models for 170 unique individuals and a total of 379 lizard-years, we (1) considered the effects of a suite of predictors – particularly lizard sex, mass and tick counts – on lizard aggression and boldness (2) assessed repeatability (i.e. consistent differences among individuals), of these behaviours over different timescales and between lizard sexes and (3) evaluated the correlation, or behavioural syndrome, between aggression and boldness. We found that males were marginally more aggressive and bolder than females, mass had no significant effect and tick loads exhibited a positive relationship with aggression and boldness. For repeatability, we found that even with the long timescales considered in this study, aggression and boldness were both repeatable – across the entire data set (∼0.4 and ∼0.3, respectively) using all lizards, as well as among years (∼0.4 and ∼0.4, respectively) using lizards observed in multiple years (93 for aggression, 73 for boldness). Repeatability did not differ substantially between the sexes. We found no syndrome between aggression and boldness – despite a weak positive correlation in multivariate mixed models, the 95% credible interval for this correlation included zero. Our results are notable because they demonstrate that wild animals may exhibit consistent personality differences in ecologically relevant behaviours over extended periods even in the face of substantial temporal variation in ecological and social factors, a fact that has likely ecological and evolutionary consequences. • Wild, long-lived (20+ years) lizards exhibited personality in the field. • Repeatability of aggression and boldness did not decline over 8 years. • Males and females did not differ markedly in their long-term consistency patterns. • Sex and parasites (ticks) were associated with changes in aggression and boldness. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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21. Harnessing landscape genomics to identify future climate resilient genotypes in a desert annual.
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Shryock, Daniel F., Washburn, Loraine K., DeFalco, Lesley A., and Esque, Todd C.
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GENOMICS , *GENOTYPES , *SEED harvesting , *SPECIES distribution , *DESERTS , *FRAGMENTED landscapes - Abstract
Local adaptation features critically in shaping species responses to changing environments, complicating efforts to revegetate degraded areas. Rapid climate change poses an additional challenge that could reduce fitness of even locally sourced seeds in restoration. Predictive restoration strategies that apply seeds with favourable adaptations to future climate may promote long‐term resilience. Landscape genomics is increasingly used to assess spatial patterns in local adaption and may represent a cost‐efficient approach for identifying future‐adapted genotypes. To demonstrate such an approach, we genotyped 760 plants from 64 Mojave Desert populations of the desert annual Plantago ovata. Genome scans on 5,960 SNPs identified 184 potentially adaptive loci related to climate and satellite vegetation metrics. Causal modelling indicated that variation in potentially adaptive loci was not confounded by isolation by distance or isolation by habitat resistance. A generalized dissimilarity model (GDM) attributed spatial turnover in potentially adaptive loci to temperature, precipitation and NDVI amplitude, a measure of vegetation green‐up potential. By integrating a species distribution model (SDM), we find evidence that summer maximum temperature may both constrain the range of P. ovata and drive adaptive divergence in populations exposed to higher temperatures. Within the species' current range, warm‐adapted genotypes are predicted to experience a fivefold expansion in climate niche by midcentury and could harbour key adaptations to cope with future climate. We recommend eight seed transfer zones and project each zone into its relative position in future climate. Prioritizing seed collection efforts on genotypes with expanding future habitat represents a promising strategy for restoration practitioners to address rapidly changing climates. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
22. Fables of the Past
- Author
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Michael Kempf
- Subjects
spatial analyses ,GIS ,multivariate modelling ,landscape archaeology ,human ecology ,Archaeology ,CC1-960 - Abstract
Prehistoric landscape reconstructions are still considered an unsolved methodological issue in archaeological research, and this includes the perception and transformation of an individual landscape in relation to situational and local ecosystem performances. Which parts of the landscape offered the potential for land-use and which areas were rather unsuitable due to a variety of environmental preconditions? The modern perception of the archaeological record that is distributed in the modern landscape does not necessarily represent a realistic dispersal of past human activity, but rather reflects the current state of archaeological research and modern land-use strategies. This contribution provides a critical assessment of spatial analyses of large and unstructured archaeological datasets and the non-reconstructibility of past, individually perceived palaeolandscapes.
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- 2020
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23. A didactic approach to models of habitat suitability (HS) and the potential distribution of biological species.
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Carrasco-Hernandez, R.
- Subjects
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SPECIES distribution , *ALGORITHMS , *HABITATS , *ENVIRONMENTAL mapping , *SPREADSHEET software , *ELECTRONIC spreadsheets - Abstract
The aim of the present assay is to provide a simple algorithm as well as a didactic theoretical framework that may serve as an introduction to understanding modern habitat suitability (HS) modelling techniques in Ecology and Biogeography. The proposal is built on classical descriptive statistics and classical ecological theories. Shelford's theory of a bell-shaped curve of tolerance is used to assign suitability values to individual sites, according to their deviations from the optimal requirements of a hypothetical biological species. Liebig's law of the minimum is applied to assess the overall suitability given a multivariate set of environmental factors. To illustrate the algorithms, hypothetical examples are given with small sets of values simulating data extracted from maps with environmental information. The reader/lecturer is invited to reproduce these small-scale examples using common spreadsheet software or to apply them at a large scale using raster datasets in any advanced geographic information system. As didactical outcomes, this algorithm allows introducing students to the general form and applications of bell-shaped exponential equations (with mu and sigma parameters), understanding the convenience of the law of the minimum when analysing multivariate datasets and the philosophical understanding of certainty/uncertainty when working with the multidimensional niche theory. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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- View/download PDF
24. Modelling loanword success – a sociolinguistic quantitative study of Māori loanwords in New Zealand English.
- Author
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Calude, Andreea Simona, Miller, Steven, and Pagel, Mark
- Subjects
SOCIOLINGUISTICS ,LOANWORDS ,LANGUAGE contact ,QUANTITATIVE research ,SUCCESS - Abstract
Loanword use has dominated the literature on language contact and its salient nature continues to draw interest from linguists and non-linguists. Traditionally, loanwords were investigated by means of raw frequencies, which are at best uninformative and at worst misleading. Following a new wave of studies which look at loans from a quantitatively more informed standpoint, modelling "success" by taking into account frequency of the counterparts available in the language adopting the loanwords, we propose a similar model of loan-use and demonstrate its benefits in a case study of loanwords from Māori into (New Zealand) English. Our model contributes to previous work in this area by combining both the success measure mentioned above with a rich range of linguistic characteristics of the loanwords (such as loan length and word class), as well as a similarly detailed group of sociolinguistic characteristics of the speakers using them (gender, age and ethnicity of both, speakers and addresses). Our model is unique in bringing together of all these factors at the same time. The findings presented here illustrate the benefit of a quantitatively balanced approach to modelling loanword use. Furthermore, they illustrate the complex interaction between linguistic and sociolinguistic factors in such language contact scenarios. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
25. Soil Organic Carbon Content Prediction Using Soil-Reflected Spectra: A Comparison of Two Regression Methods
- Author
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Sharon Gomes Ribeiro, Adunias dos Santos Teixeira, Marcio Regys Rabelo de Oliveira, Mirian Cristina Gomes Costa, Isabel Cristina da Silva Araújo, Luis Clenio Jario Moreira, and Fernando Bezerra Lopes
- Subjects
SOC ,chemometrics ,soil spectral library ,spectroradiometer ,multivariate modelling ,Science - Abstract
Quantifying the organic carbon content of soil over large areas is essential for characterising the soil and the effects of its management. However, analytical methods can be laborious and costly. Reflectance spectroscopy is a well-established and widespread method for estimating the chemical-element content of soils. The aim of this study was to estimate the soil organic carbon (SOC) content using hyperspectral remote sensing. The data were from soils from two localities in the semi-arid region of Brazil. The spectral reflectance factors of the collected soil samples were recorded at wavelengths ranging from 350–2500 nm. Pre-processing techniques were employed, including normalisation, Savitzky–Golay smoothing and first-order derivative analysis. The data (n = 65) were examined both jointly and by soil class, and subdivided into calibration and validation to independently assess the performance of the linear methods. Two multivariate models were calibrated using the SOC content estimated in the laboratory by principal component regression (PCR) and partial least squares regression (PLSR). The study showed significant success in predicting the SOC with transformed and untransformed data, yielding acceptable-to-excellent predictions (with the performance-to-deviation ratio ranging from 1.40–3.38). In general, the spectral reflectance factors of the soils decreased with the increasing levels of SOC. PLSR was considered more robust than PCR, whose wavelengths from 354 to 380 nm, 1685, 1718, 1757, 1840, 1876, 1880, 2018, 2037, 2042, and 2057 nm showed outstanding absorption characteristics between the predicted models. The results found here are of significant practical value for estimating SOC in Neosols and Cambisols in the semi-arid region of Brazil using VIS-NIR-SWIR spectroscopy.
- Published
- 2021
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26. Moisture- and mould-resistance: multi-modal modelling leveraging X-ray tomography in edge-sealed cross-laminated timber
- Author
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Buck, Dietrich, Wallentén, Petter, Sehlstedt-Persson, Margot, Öhman, Micael, Buck, Dietrich, Wallentén, Petter, Sehlstedt-Persson, Margot, and Öhman, Micael
- Abstract
Edge-sealing, which involves treating the edges of wood products, improves water resistance. This study investigated the feasibility of edge-sealed cross-laminated timber (CLT) panels to reduce capillary water uptake, thereby resisting mould formation. The water and vapour permeabilities of ten characteristically different single-layer sealant coating systems were systematically determined. Multi-modal assessment leveraged by computed tomography (CT) scanning methodology was used to enhance detection of material characteristics beyond the standard coating permeability assessment. Moisture content was observed to change during the specimens’ absorption and desorption depending on the sealant system applied. The results revealed different characteristics of coatings during the water absorption and desorption stages. Findings from this study were used to develop recommendations regarding the water resistance of coating systems, curing time, susceptibility to mould formation, and industrial applicability. Results suggest that edge-sealed CLT could minimise the risk of mould formation, which can occur at worksites with minimal weather protection. The method developed in this study provides a basis to evaluate new coating systems and determine which use case is the best for a particular coating type. This study also incorporates insights from industry to identify future research orientations, which may pave the way for new designs and assessment techniques., Validerad;2023;Nivå 2;2023-05-29 (joosat);Funder: TräCentrum Norr (TCN), [grant number 239268, 239278]; FORMAS project: Experimental Studies of Capillary Phenomena in Bio-based Materials [grant number 942-2016-64]Licens fulltext: CC BY License
- Published
- 2023
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27. The relationship between time to analgesic administration and emergency department length of stay: A retrospective review.
- Author
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Hughes, James A., Brown, Nathan J., Chiu, Jacqui, Allwood, Brandon, and Chu, Kevin
- Subjects
- *
ANALGESICS , *LENGTH of stay in hospitals , *HOSPITAL emergency services , *LONGITUDINAL method , *MEDICAL care research , *MULTIVARIATE analysis , *NURSING , *PAIN , *REGRESSION analysis , *RESEARCH funding , *STATISTICS , *TIME , *EMPLOYEES' workload , *EMPIRICAL research , *QUANTITATIVE research , *RETROSPECTIVE studies , *DATA analysis software , *ELECTRONIC health records , *STATISTICAL models , *DESCRIPTIVE statistics - Abstract
Aim: To determine the association between time to first analgesic medication and emergency department length of stay (ED LOS). Design: Retrospective cohort study. Method: We conducted this study in a large, inner‐city emergency department and included adult patients who presented with pain as a symptom and received analgesic medication(s). Study participants were identified from a random selection of 2,000 adult patients who presented between August–October 2018. The relationship between ED LOS and time to first analgesic medication was described using bivariate and multivariate linear regression. Results: Of the 2,000 randomly selected patients presenting between August and October 2018, 727 (36.35%) had pain as a symptom on arrival, 423 (21.15%) had analgesic medication administered. The median time to first analgesic medication was in 62 (interquartile range: 36–105) minutes and median ED LOS was 218 (interquartile range: 160–317.5) minutes. After adjusting for the effects of sex, urgency of the presentation, emergency department location first seen by clinician, departure destination and workload metrics (average daily time to be seen and daily access block). Time to first analgesic medication was independently associated with ED LOS, contributing to 6.96% of the variance in the multivariate model. Conclusion: Providing analgesic medication faster to patients presenting in pain, in addition to previously demonstrated positive patient outcomes, may decrease their ED LOS. Impact: Reducing ED LOS through faster pain care, benefits the patient through faster pain relief and can benefit the department by reducing the total amount of care delivered in the emergency department. Reducing total care delivery frees up resources to improve the care to all emergency department patients. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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28. Fables of the past: landscape (re-)constructions and the bias in the data.
- Author
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Kempf, Michael
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LANDSCAPES ,ANIMAL dispersal ,FABLES ,CULTURAL landscapes ,DENTAL calculus ,LANDSCAPE archaeology ,HUMAN ecology - Abstract
Copyright of Documenta Praehistorica is the property of Documenta Praehistorica and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2020
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29. Multivariate simulation of a multi-element deposit, based on the different transformations. Case study: Mehdiabad deposit, Iran.
- Author
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MAHLOOJI, R., ASGHARI, O., and GHANE, B.
- Subjects
- *
DRILL core analysis , *CASE studies , *MULTIVARIATE analysis , *MINERAL industries , *METAL tailings - Abstract
Modelling of multivariate complex deposits with the presence of several correlated attributes is a very challenging issue in the mining industry which can be addressed using existing multivariate analysis method. In this study, some of these multivariate methods, such as Step-wise Conditional Transformation (SCT), Minimum/maximum Autocorrelation Factors (MAF) and Projection Pursuit Multivariate Transform (PPMT), were applied to a data set of Mehdiabad deposit. The data set is containing core samples to be analysed for Pb, Zn, Cu, and Ag. At the first stage, the variables were transformed by mentioned methods and a set of validations were performed to the transformation results. Next, the transformed variables were simulated using sequential Gaussian simulation and the results were analysed as well. Based on the validation reviews, it was concluded that the PPMT could present more reliable outcomes. Furthermore, for every transformation, the grade-tonnage curves for each transformed variable were calculated based on the E-type values of the simulations and the discrepancies between them were also investigated. The results of this study can be also used in mine planning and risk measurement during mining. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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30. Impact of production parameters on physiochemical characteristics of wood ash for possible utilisation in cement-based materials.
- Author
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Sigvardsen, Nina M., Kirkelund, Gunvor M., Jensen, Pernille E., Geiker, Mette R., and Ottosen, Lisbeth M.
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WOOD ash ,WOOD combustion ,WOOD chips ,CEMENT ,LEAST squares ,MATERIALS - Abstract
Energy production is reorganised to mitigate the pressure on the global environment. This reorganisation leads to an increase in the production of wood ash (WA). Multivariate modelling was used to identify the link between production parameters and the physiochemicalcharacteristics of different WAs and to determine which production parameters result in the WAs most suitable for utilisation in cement-based materials. Based on the multivariate model partial least square, WA originating from circulating fluidised bed combustion of wood chips made from whole trees is the optimal type of WA when utilised as a supplementary cementing material with pozzolanic activity. WA originating from the combustion of wood chips made from whole trees is the optimal type of WA when utilised as a supplementary cementing material with hydraulic activity. Furthermore, the combustion method and type of ash were seen to have the largest influence on the physiochemical characteristics of WAs compared to the other production parameters included in this study. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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31. Revealing the structure of the associations between housing system, facilities, management and welfare of commercial laying hens using Additive Bayesian Networks.
- Author
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Comin, Arianna, Jeremiasson, Alexandra, Kratzer, Gilles, and Keeling, Linda
- Subjects
- *
POULTRY housing , *HENS , *ANIMAL welfare , *POULTRY mortality , *POULTRY farm management , *MITE infestations , *BAYESIAN analysis - Abstract
Abstract After the ban of battery cages in 1988, a welfare control programme for laying hens was developed in Sweden. Its goal was to monitor and ensure that animal welfare was not negatively affected by the new housing systems. The present observational study provides an overview of the current welfare status of commercial layer flocks in Sweden and explores the complexity of welfare aspects by investigating and interpreting the inter-relationships between housing system, production type (i.e. organic or conventional), facilities, management and animal welfare indicators. For this purpose, a machine learning procedure referred to as structure discovery was applied to data collected through the welfare programme during 2010–2014 in 397 flocks housed in 193 different farms. Seventeen variables were fitted to an Additive Bayesian Network model. The optimal model was identified by an exhaustive search of the data iterated across incremental parent limits, accounting for prior knowledge about causality, potential over-dispersion and clustering. The resulting Directed Acyclic Graph shows the inter-relationships among the variables. The animal-based welfare indicators included in this study – flock mortality, feather condition and mite infestation – were indirectly associated with each other. Of these, severe mite infestations were rare (4% of inspected flocks) and mortality was below the acceptable threshold (< 0.6%). Feather condition scored unsatisfactory in 21% of the inspected flocks; however, it seemed to be only associated to the age of the flock, ruling out any direct connection with managerial and housing variables. The environment-based welfare indicators – lighting and air quality – were an issue in 5 and 8% of the flocks, respectively, and showed a complex inter-relationship with several managerial and housing variables leaving room for several options for intervention. Additive Bayesian Network modelling outlined graphically the underlying process that generated the observed data. In contrast to ordinary regression, it aimed at accounting for conditional independency among variables, facilitating causal interpretation. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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32. Computational multivariate modelling of electrical activity of the porcine uterus during spontaneous and hormone‐induced oestrus.
- Author
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Domino, Malgorzata, Domino, Krzysztof, Pawlinski, Bartosz, Sady, Maria, Gajewska, Magdalena, and Gajewski, Zdzislaw
- Subjects
- *
INDUCED ovulation , *UTERUS , *COMPUTER simulation , *ESTRUS - Abstract
New Findings: What is the central question of this study?Does oestrous cycle synchronization influence myoelectrical activity of porcine myometrium?What is the main finding and its importance?Exogenous hormones used to synchronize oestrus in pigs altered myoelectrical activity, which was effectively modelled. Higher‐order multivariate statistic modelling provided evidence of similar activity in both types of oestrus, but a larger order of EMG signals during induced oestrus. Higher‐order statistical analysis of the probabilistic model suggests the beginning of the early follicular phase and the mid‐luteal phase to be most important in evaluation of the natural patterns of myoelectrical activity. Higher‐order multivariate cumulants are more informative than classical statistics in characterization of myoelectrical activity changes in porcine myometrium. In pig production units, control of the oestrous cycle and synchronization of ovulation have become routine herd management procedures. During the oestrous cycle, in both induced and spontaneous conditions, the ovaries and the uterus undergo hormone‐dominated physiological changes, which are consistent with the hypothesis that there is a functional role of uterine contractions in promoting fertilization. We have used electromyography to determine whether the use of exogenous hormones, such as equine chorionic gonadotrophin and human chorionic gonadotrophin, which have the potential to control the timing of ovulation in female pigs, changes the multivariate relationships between parameters of electrical bursts and modulates the patterns of myoelectrical activity. We used the mathematical approach of higher‐order multivariate cumulants in complex modelling of the myometrial electrical activity. The experiment was conducted on 12 mature Polish Landrace sows, and uterine activity was recorded during both spontaneous and induced oestrous cycles. The burst parameters were determined using six features in the time domain and, after Fast Fourier transformation, in the frequency domain. Evaluation of myoelectrical activity patterns was conducted based on classical univariate statistical methods and multivariate probabilistic modelling. The classical statistical approach indicated weaker myoelectrical activity after hormonal stimulation, whereas the higher‐order multivariate statistical model showed evidence of similar status of activity and a larger order of signals during induced oestrus. Routine oestrous cycle synchronization affects the multivariate probabilistic model of myometrial electrical activity. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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- View/download PDF
33. A multivariate model to predicting vibration features for equipment prognosis
- Author
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A. Kolawole and C. O. Ekoh
- Subjects
Multivariate Modelling ,Predictive Maintenance ,Prognosis ,Remaining Useful Life ,Vibration Analysis ,General Medicine - Abstract
Vibration analysis, a vital tool in the scheduling of equipment for maintenance is used to assess the useful life of equipment for allocation of resources to mitigate downtime. Compared to previous approaches of univariate prediction, this study presents a more practical model by employing vibration analysis data as a multivariate problem in predicting the remaining useful life (RUL) of an equipment. Applying the model, Multiple Linear Regression (MLR) and Linear Programming (LP) were explored to determine the deterioration rate and the RUL of the equipment. The results showed that the MLR had a high predictive accuracy on the data sets. Furthermore, a p-value of 1.546e-06 and Multiple R-squared value of 0.8215 were obtained showing that the MLR appears to be a good prediction model. From the solution of the LP formulation, the RUL of the equipment was 181 days. These results closely matched the historical data of the equipment which implied this model could be used for planning of maintenance activity for this equipment and any similar equipment.
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- 2022
34. Rapid authentication of variants of Gastrodia elata Blume using near-infrared spectroscopy combined with chemometric methods.
- Author
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Yang, Pan-pan, Zeng, Zhong-da, Hou, Ying, Chen, Ai-ming, Xu, Juan, Zhao, Long-qing, and Liu, Xiang-yi
- Subjects
- *
CHEMOMETRICS , *NEAR infrared spectroscopy , *LATENT variables - Abstract
The variety is one of the most important factors to generate difference of chemical compositions, which unavoidably influences the quality of natural medicine. Thus, simple and rapid authentication of different variants has great academic and practical significance. In this study, the goal was achieved with the help of near infrared spectroscopy (NIR) and chemometrics by using Gastrodia elata Blume as an example. A total of 540 samples including two classes of variants and their forms were investigated as a whole. The mean spectra of samples of each class and their 2-D synchronous correlation spectra were simultaneously applied to discover the difference of chemical characteristics. After hybrid pre-processing of the first and second derivative combined with Savitzky-Golay and Norris filtering, partial least squares discrimination analysis (PLS-DA) on the basis of latent variable projection was used to assess the feasibility for classification. The results show higher prediction accuracy in both internal test set and external prediction set. In order to further improve the robustness for modeling, three methods for wavelength selection were comprehensively compared to optimize PLS-DA models, including variable importance in the projection (VIP), random frog (RF), and Monte Carlo uninformative variable elimination (MC-UVE). The prediction accuracy of combination of the 2nd derivative, Norris, MC-UVE and PLS-DA achieved to 99.11% and 98.89% corresponding to the internal test set and external prediction set, respectively. The strategies proposed in this work perform effectiveness for rapid and accurate authentication of variants of plants with high chemical complexity. • The combination of NIR and chemometric methods was proposed for simple and rapid recognition of three variants G. elata Bl. • The strategy for optimal model was attained, including second-order derivative, Norris, MC-UVE, and PLS-DA for modelling. • The optimal modle showed good prediction accuracy of 99.11% and 98.89% to test and prediction sets, respectively. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
35. Recycled Polyolefins. Material Properties and Means for Quality Determination
- Author
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Karlsson, Sigbritt and Albertsson, Ann-Christine, editor
- Published
- 2004
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36. A satellite-based Standardized Antecedent Precipitation Index (SAPI) for mapping extreme rainfall risk in Myanmar
- Author
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Nguyen-Huy, Thong (author), Kath, Jarrod (author), Nagler, T.W. (author), Khaung, Ye (author), Su Aung, Thee Su (author), Mushtaq, Shahbaz (author), Marcussen, Torben (author), Stone, Roger (author), Nguyen-Huy, Thong (author), Kath, Jarrod (author), Nagler, T.W. (author), Khaung, Ye (author), Su Aung, Thee Su (author), Mushtaq, Shahbaz (author), Marcussen, Torben (author), and Stone, Roger (author)
- Abstract
In recent decades, substantial efforts have been devoted in flood monitoring, prediction, and risk analysis for aiding flood event preparedness plans and mitigation measures. Introducing an initial framework of spatially probabilistic analysis of flood research, this study highlights an integrated statistical copula and satellite data-based approach to modelling the complex dependence structures between flood event characteristics, i.e., duration (D), volume (V) and peak (Q). The study uses Global daily satellite-based Climate Hazards Group InfraRed Precipitation with Station data (CHIRPS) (spatial resolution of ∼5 km) during 1981–2019 to derive a Standardized Antecedence Precipitation Index (SAPI) and its characteristics through a time-dependent reduction function for Myanmar. An advanced vine copula model was applied to model joint distributions between flood characteristics for each grid cell. The southwest (Rakhine, Bago, Yangon, and Ayeyarwady) and south (Kayin, Mon, and Tanintharyi) regions are found to be at high risk, with a probability of up to 40% of flood occurrence in August and September in the south (Kayin, Mon, and Tanintharyi) and southwest regions (Rakhine, Bago, Yangon, and Ayeyarwady). The results indicate a strong correlation among flood characteristics; however, their mean and standard deviation are spatially different. The findings reveal significant differences in the spatial patterns of the joint exceedance probability of flood event characteristics in different combined scenarios. The probability that duration, volume, and peak concurrently exceed 50th-quantile (median) values are about 60–70% in the regions along the administrative borders of Chin, Sagaing, Mandalay, Shan, Nay Pyi Taw, and Keyan. In the worst case and highest risk areas, the probability that duration, volume, and peak exceed the extreme values, i.e., the 90th-quantile, about 10–15% in the southwest of Sagaing, southeast of Chin, Nay Pyi Taw, Mon and areas around these st, Statistics
- Published
- 2022
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37. How many are enough?: Investigating the effectiveness of multiple conflict indicators for crash frequency-by-severity estimation by automated traffic conflict analysis
- Author
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Arun, Ashutosh, Haque, Shimul (Md. Mazharul), Washington, Simon, Sayed, Tarek, Mannering, Fred L., Arun, Ashutosh, Haque, Shimul (Md. Mazharul), Washington, Simon, Sayed, Tarek, and Mannering, Fred L.
- Abstract
Traffic conflict techniques are a viable alternative to crash-based safety assessments and are particularly well suited to evaluating emerging technologies such as connected and automated vehicles for which crash data are sparsely available. Recently, the use of multiple traffic conflict indicators has become common in methodological studies, yet it is often difficult to determine which conflict indicators are appropriate given the application context, and the net benefit, in terms of improved crash prediction accuracy, of considering additional conflict indicators. Addressing these concerns, this study investigates the potential benefits of multiple conflict indicators for conflict-based crash estimation models by using a multivariate extreme value modeling framework (with Gumbel-Hougaard copulas) to estimate crash frequency by severity. The selected conflict indicators include Modified Time-To-Collision (MTTC), Deceleration Rate to Avoid a Collision (DRAC), Proportion of Stopping Distance (PSD) and expected post-collision change in velocity (Delta-V). The proposed framework was applied to estimate the total, severe (Maximum Abbreviated Injury Scale ≥ 3; MAIS3+), and non-severe (MAIS < 3) rear-end crash frequencies at three four-legged signalized intersections in Brisbane, Australia. Rear-end traffic conflicts were extracted from video data using state-of-the-art Computer Vision analytics. Results show that the prediction performance improvements are not necessarily proportional to the number of conflict indicators used in extreme value models. MTTC and DRAC, combined with the severity indicator Delta-V, were the most suitable predictors of rear-end crashes at signalized intersections. Results suggest that instead of adding more and more conflict indicators, careful selection of compatible conflict indicators (considering their functional differences and empirical correlations) is the best way to enhance the predictive performance of conflict-based models.
- Published
- 2022
38. Multivariate statistical modelling to improve particle treatment verification: Implications for prompt gamma-ray timing
- Author
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(0000-0002-9742-8518) Schellhammer, S., Wiedkamp, J., Löck, S., (0000-0002-9501-0898) Kögler, T., (0000-0002-9742-8518) Schellhammer, S., Wiedkamp, J., Löck, S., and (0000-0002-9501-0898) Kögler, T.
- Abstract
We present an improved method for in-vivo proton range verification by prompt gamma-ray timing based on multivariate statistical modelling. To this end, prompt gamma-ray timing distributions acquired during pencil beam irradiation of an acrylic glass phantom with air cavities of different thicknesses were analysed. Relevant histogram features were chosen using forward variable selection and the Least Absolute Shrinkage and Selection Operator (LASSO) from a feature assortment based on recommendations of the Image Biomarker Standardisation Initiative. Candidate models were defined by multivariate linear regression and evaluated based on their coefficient of determination \(R^2\) and root mean square error \(RMSE\). The newly developed models showed a clearly improved predictive power (\(R^2 > 0.7\)) compared to the previously used models (\(R^2 < 0.5\)) and allowed for the identification of introduced air cavities in a scanned treatment field. %The parameter selection showed better predictive power of the energy-specific models (RM SE < 1,8 mm) compared to the energy-independent models (RM SE > 3 mm). %for counting statistics equivalent to a single spot measured with eight detector units. These results demonstrate that elaborate statistical models can enhance prompt gamma ray based treatment verification and increase its potential for routine clinical application.
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- 2022
39. New approaches in phenotype prediction – machine learning techniques
- Author
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Jocković, Milan, Jocković, Milan, Cvejić, Sandra, Jocić, Siniša, Radeka, Ilija, Jocković, Jelena, Radanović, Aleksandra, Terzić, Sreten, Dedić, Boško, Jocković, Milan, Jocković, Milan, Cvejić, Sandra, Jocić, Siniša, Radeka, Ilija, Jocković, Jelena, Radanović, Aleksandra, Terzić, Sreten, and Dedić, Boško
- Abstract
Use of multivariate modelling in order to improve prediction accuracy has been widely applied in plant breeding programs. In these models phenotype prediction is based on large number of independent variables which is at the same time strength and weakness. Lately, intensive research in order to improve prediction accuracy resulted in extensive use of different machine learning techniques. The aim of this study is to present new approaches in phenotype prediction based on complex relationships between genotypes and phenotypes. Widely used, one of the main tools in machine learning is artificial neural network (ANN). Although it has a long history, this powerful class of algorithms has been recently used as a state-of-the-art solution for non-linear relationship between the genotype and the trait of interest. Another important advance, capable of identifying extremely complex patterns of prediction and classification of information is called deep learning (DL). Main difference between DL and ANN is in the numbers of layers of neurons. Being based on how humans learn and process information, machine learning is powerful tool for processing complex data in order to make accurate predictions.
- Published
- 2022
40. Multivariate hierarchical analysis of car crashes data considering a spatial network lattice
- Author
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Gilardi, A, Mateu, J, Borgoni, R, Lovelace, R, Gilardi, Andrea, Mateu, Jorge, Borgoni, Riccardo, Lovelace, Robin, Gilardi, A, Mateu, J, Borgoni, R, Lovelace, R, Gilardi, Andrea, Mateu, Jorge, Borgoni, Riccardo, and Lovelace, Robin
- Abstract
Road traffic casualties represent a hidden global epidemic, demanding evidence-based interventions. This paper demonstrates a network lattice approach for identifying road segments of particular concern, based on a case study of a major city (Leeds, UK), in which 5862 crashes of different severities were recorded over an 8-year period (2011–2018). We consider a family of Bayesian hierarchical models that include spatially structured and unstructured random effects to capture the dependencies between the severity levels. Results highlight roads that are more prone to collisions, relative to estimated traffic volumes, in the north-west and south of city centre. We analyse the modifiable areal unit problem (MAUP), proposing a novel procedure to investigate the presence of MAUP on a network lattice. We conclude that our methods enable a reliable estimation of road safety levels to help identify ‘hotspots’ on the road network and to inform effective local interventions.
- Published
- 2022
41. How Wood Fuels' Quality Relates to the Standards: A Class-Modelling Approach.
- Author
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Zanetti, Michela, Costa, Corrado, Greco, Rosa, Grigolato, Stefano, Aalmo, Giovanna Ottaviani, and Cavalli, Raffaele
- Subjects
- *
FUELWOOD , *WOOD chips , *PARTICLE size distribution , *GREENHOUSE gases - Abstract
The quality requirements of wood biofuels are regulated by a series of harmonized international standards. These standards define the technical parameter limits that influence the quality of solid biomass as a fuel. In 2014 the European reference standard for solid biofuel was replaced by the International ISO standard. In the case of wood chips, the main difference between the European and International standards is the definition of particle size distribution classes. In this context, this study analyses the quality of wood chips and its variation over the years according to the "former" (EN 14691-4) and "in force" (ISO 17225-4) standards. A Soft Independent Modelling of Class Analogy (SIMCA) model was built to predict the best quality of wood chips and to clarify the relationship between quality and standard parameters, time and changes in the standard regulations. The results show that, compared to the EN standards, classification with the ISO standards increases the samples belonging to the best quality classes and decreases the not classified samples. Furthermore, all the SIMCA models have a high sensitivity (>90%), reflect the differences introduced to the quality standards and are therefore suitable for monitoring the quality of wood chips and their changes. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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- View/download PDF
42. Short-term Traffic Forecasting Using Multivariate Autoregressive Models.
- Author
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Pavlyuk, Dmitry
- Subjects
TRAFFIC estimation ,TRAFFIC flow ,BOX-Jenkins forecasting ,SPATIO-temporal variation ,TRAFFIC accidents - Abstract
This research is devoted to a systematic review of multivariate models in the context of their application to short-term traffic flow forecasting. A set of discussed models includes autoregressive integrated moving average models (ARIMA and VARMA), error correction models (VECM and EC-VARMA), space-time ARMA (STARMA), and multivariate autoregressive space state models (MARSS). All these models are based on different assumptions about a structure of interrelationships in traffic data (in time, in space or between different traffic characteristics). We discussed base assumptions of these models (such as stationary of traffic flows and spatial independence of data) and their importance in the domain of transport flows. The discussion is supplemented with an empirical application of the models to forecasting of traffic speeds for a small road segment. Empirical conclusions and projected research directions are also presented. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
43. Multivariate hierarchical analysis of car crashes data considering a spatial network lattice
- Author
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Andrea Gilardi, Jorge Mateu, Riccardo Borgoni, Robin Lovelace, Gilardi, A, Mateu, J, Borgoni, R, and Lovelace, R
- Subjects
FOS: Computer and information sciences ,Statistics and Probability ,Economics and Econometrics ,multivariate modelling ,car crashes data ,Bayesian hierarchical models ,Statistics - Applications ,MAUP ,spatial networks ,network lattice ,SECS-S/01 - STATISTICA ,Applications (stat.AP) ,Statistics, Probability and Uncertainty ,multivariatemodelling ,spatial network ,Bayesian hierarchical model ,Social Sciences (miscellaneous) - Abstract
Road traffic casualties represent a hidden global epidemic, demanding evidence-based interventions. This paper demonstrates a network lattice approach for identifying road segments of particular concern, based on a case study of a major city (Leeds, UK), in which 5,862 crashes of different severities were recorded over an eight-year period (2011-2018). We consider a family of Bayesian hierarchical models that include spatially structured and unstructured random effects, to capture the dependencies between the severity levels. Results highlight roads that are more prone to collisions, relative to estimated traffic volumes, in the northwest and south of city-centre. We analyse the Modifiable Areal Unit Problem (MAUP), proposing a novel procedure to investigate the presence of MAUP on a network lattice. We conclude that our methods enable a reliable estimation of road safety levels to help identify "hotspots" on the road network and to inform effective local interventions., 23 pages, 5 tables, 8 figures
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- 2022
44. Key Factors for Activated Carbon Adsorption of Pharmaceutical Compounds from Wastewaters: A Multivariate Modelling Approach
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Rui M. C. Viegas, Ana S. Mestre, Elsa Mesquita, Miguel Machuqueiro, Marta A. Andrade, Ana P. Carvalho, and Maria João Rosa
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multivariate modelling ,Water supply for domestic and industrial purposes ,Geography, Planning and Development ,Hydraulic engineering ,Aquatic Science ,Biochemistry ,adsorption ,pharmaceutical compounds ,powdered activated carbons ,TC1-978 ,wastewater ,TD201-500 ,PLS regression ,Water Science and Technology - Abstract
Projection to Latent Structures (PLS) regression, a generalization of multiple linear regression, is used to model two datasets (40 observed data points each) of adsorption removal of three pharmaceutical compounds (PhCs), of different therapeutic classes and physical–chemical properties (carbamazepine, diclofenac, and sulfamethoxazole), from six real secondary effluents collected from wastewater treatment plants onto different powdered activated carbons (PACs). For the PLS regression, 25 descriptors were considered: 7 descriptors related to the PhCs properties, 10 descriptors related to the wastewaters properties (8 related to the organic matrix and 2 to the inorganic matrix), and 8 descriptors related to the PACs properties. This modelling approach showed good descriptive capability, showing that hydrophobic PhC-PAC interactions play the major role in the adsorption process, with the solvation energy and log Kow being the most suitable descriptors. The results also stress the importance of the competition effects of water dissolved organic matter (DOM), namely of its slightly hydrophobic compounds impacting the adsorption capacity or its charged hydrophilic compounds impacting the short-term adsorption, while the water inorganic matrix only appears to impact PAC adsorption capacity and not the short-term adsorption. For the pool of PACs tested, the results point to the BET area as a good descriptor of the PAC capacity, while the short-term adsorption kinetics appears to be better related to its supermicropore volume and density. The improvement in these PAC properties should be regarded as a way of refining their performance. The correlations obtained, involving the impact of water, PhC and PAC-related descriptors, show the existence of complex interactions that a univariate analysis is not sufficient to describe.
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- 2022
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45. A space-time multivariate Bayesian model to analyse road traffic accidents by severity.
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Boulieri, Areti, Liverani, Silvia, Hoogh, Kees, and Blangiardo, Marta
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TRAFFIC accidents ,SPACETIME ,MULTIVARIATE analysis ,BAYESIAN analysis ,ACCIDENT statistics ,PUBLIC health - Abstract
The paper investigates the dependences between levels of severity of road traffic accidents, accounting at the same time for spatial and temporal correlations. The study analyses road traffic accidents data at ward level in England over the period 2005-2013. We include in our model multivariate spatially structured and unstructured effects to capture the dependences between severities, within a Bayesian hierarchical formulation. We also include a temporal component to capture the time effects and we carry out an extensive model comparison. The results show important associations in both spatially structured and unstructured effects between severities, and a downward temporal trend is observed for low and high levels of severity. Maps of posterior accident rates indicate elevated risk within big cities for accidents of low severity and in suburban areas in the north and on the southern coast of England for accidents of high severity. The posterior probability of extreme rates is used to suggest the presence of hot spots in a public health perspective. [ABSTRACT FROM AUTHOR]
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- 2017
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46. Quantitative analysis of solid samples using modified specular reflectance accessory.
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Czaja, Tomasz, Mazurek, Sylwester, and Szostak, Roman
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FOURIER transform infrared spectroscopy , *QUANTITATIVE chemical analysis , *SPECULAR reflectance , *DRUG analysis , *FOOD chemistry , *CINNARIZINE - Abstract
Diffuse reflectance Fourier transform infrared spectroscopy (DRIFTS) is a fast, reliable and cost effective analytical method, requiring minimal or no sample preparation. It is commonly used in the course of qualitative and quantitative analysis of pharmaceutical ingredients and food. We demonstrate that simpler and cheaper specular reflectance (SR) accessory working in a DRIFTS like mode (SR-DL) can be an alternative for DIRFTS attachment. An application of a modified SR accessory for quantitative analysis of solids samples is presented. As a case study the concentration of cinnarizine in commercial tablets has been determined from DRIFTS and SR-DL infrared (IR) and near-infrared (NIR) spectra recorded using DTGS (deuterated triglicine sulphate) detector in the IR and NIR regions and InGaAs (indium-gallium arsenide) detector in the NIR range. Based on these spectra Partial Least Squares (PLS) models were constructed and relative standard errors of prediction (RSEP) were calculated for the calibration, validation and analysed data sets. They amounted to 2.4–2.5%, 2.1–2.7% and 2.0–2.6% for the DRIFTS attachment while 2.1–2.2%, 2.0–2.3% and 1.9–2.6%, respectively, for the modified SR accessory. Obtained error values indicate that modified SR accessory can be effectively used for quantification of solid pharmaceutical samples in the mid- and near-infrared regions. [ABSTRACT FROM AUTHOR]
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- 2016
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47. Multiple bioanalytical method based residual biomass prediction in microbial culture using multivariate regression and artificial neural network.
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Lhamo, Pema and Mahanty, Biswanath
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MICROBIAL cultures , *BIOMASS estimation , *BIOMASS , *PARTIAL least squares regression , *OPACITY (Optics) , *LATENT variables , *LEAST squares - Abstract
Optical density (OD) based measurements cannot be a reliable proxy for residual biomass concentration in polyhydroxyalkanoate (PHA) accumulating microbial culture, as cell size and morphology change during growth. In this study, four independent analytical methods i.e., OD measurement at 540 nm and 600 nm, tetrazolium reduction assay, and intracellular protein estimation were adopted to model residual biomass growth in Cupriavidus necator. The inter-day variation of calibration slope for residual biomass was significant (p < 0.001), and the regression coefficient (R2) of composite samples across the methods varied between 0.74 and 0.96. A reduced quadratic polynomial model (R2, 0.996; adjusted R2, 0.995, cross-validation R2 0.987) was chosen to predict residual biomass using multi-analytical measurements. Partial least square regression and variable selection suggested the inclusion of OD 540 nm and protein measurement into two retained latent variables, with R2 of 0.986, and adjusted R2 of 0.972. ANN model offered good predictability for residual biomass, showing close agreement of experimental and modelled datasets for training, validation, and test subsets with R2 of 0.998, 0.994, and 0.943, respectively. Analytical sensitivity of quadratic and PLS regression models were 0.058 and 0.164 respectively. A comparison of the proposed methods suggests that all three can be used as an alternative to dry-cell-weight-based residual biomass estimation, avoiding lengthy drying time and PHA extraction and measurement steps. • Optical density is an unreliable predictor for residual biomass. • A multi-analytical method with intracellular protein, tetrazolium assay is proposed. • Reduced quadratic, PLS model and ANN reliably predict residual biomass. • Optical density at 540 nm and protein estimation are retained in PLS regression. [ABSTRACT FROM AUTHOR]
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- 2022
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48. Factors associated with time to first analgesic medication in the emergency department
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Hughes, James A, Alexander, Kimberly E, Spencer, Lyndall, Yates, Patsy, Hughes, James A, Alexander, Kimberly E, Spencer, Lyndall, and Yates, Patsy
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AIM AND OBJECTIVE: To examine the factors associated with time to first analgesic medication in the emergency department.BACKGROUND: Pain is the most common symptom presenting to the emergency department, and the time taken to deliver analgesic medication is a common outcome measure. Factors associated with time to first analgesic medication are likely to be multifaceted, but currently poorly described.DESIGN: Retrospective cohort study.METHODS: Cox proportional hazards regression modelling was undertaken to evaluate the associations between person, environment, health and illness variables within Symptom Management Theory and time to first analgesic medication in a sample of adult patients presenting with moderate-to-severe pain to an emergency department over twelve months. This study was completed in line with the STROBE statement.RESULTS: 383 patients were included in the study, 290 (75.92%) of these patients received an analgesic medication in a median time of 45 minutes (interquartile range, 70 minutes). A model containing nine explanatory variables associated with time to first analgesic medication was identified. These nine variables (employment status, discharge location, triage score, Charlson score, arrival pain score, socio-economic status, first location, daily total treatment time and patient time to be seen) represent all of the domains of the Symptom Management Theory.CONCLUSIONS: Person, environment, health and illness factors are associated with the time taken to deliver analgesic medication to those in pain in the emergency department. This study demonstrates the complexity of factors associated with pain care and the applicability of Symptom Management Theory to pain care in the emergency department.RELEVANCE TO CLINICAL PRACTICE: Identifying a model of factors that are associated with the time in which the most common symptom presenting to the emergency department is treated allows for targeted interv
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- 2021
49. Resource Model Updating For Compositional Geometallurgical Variables
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Prior-Arce, A., (0000-0001-9847-0462) Tolosana Delgado, R., (0000-0003-4646-943X) Boogaart, K. G., Benndorf, J., Prior-Arce, A., (0000-0001-9847-0462) Tolosana Delgado, R., (0000-0003-4646-943X) Boogaart, K. G., and Benndorf, J.
- Abstract
In the field of mineral resources extraction, one main challenge is to meet production targets in terms of geometallurgical properties. These properties influence the processing of the ore and are often represented in resource modeling by coregionalized variables with a complex relationship between them. Valuable data are available about geometalurgical properties and their interaction with the beneficiation process given sensor technologies during production monitoring. The aim of this research is to update resource models as new observations become available. A popular method for updating is the ensemble Kalman filter. This method relies on Gaussian assumptions and uses a set of realizations of the simulated models to derive sample covariances that can propagate the uncertainty between real observations and simulated ones. Hence, the relationship among variables has a compositional nature, such that updating these models while keeping the compositional constraints is a practical requirement in order to improve the accuracy of the updated models. This paper presents an updating framework for compositional data based on ensemble Kalman filter which allows us to work with compositions that are transformed into a multivariate Gaussian space by log-ratio transformation and flow anamorphosis. This flow anamorphosis, transforms the distribution of the variables to joint normality while reasonably keeping the dependencies between components. Furthermore, the positiveness of those variables, after updating the simulated models, is satisfied. The method is implemented in a bauxite deposit, demonstrating the performance of the proposed approach.
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- 2021
50. Screening of untreated municipal solid waste incineration fly ash for use in cement-based materials: chemical and physical properties
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Ebert, Benjamin A. R., Steenari, Britt-Marie, Geiker, Mette R., and Kirkelund, Gunvor M.
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- 2020
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