125 results on '"ion-binding"'
Search Results
2. Synthesis of Biodegradable Materials and Chemical Sensors Via Romp
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Khosravi, Ezat, Czelusniak, Izabela, Grancharov, Georgi, Kataky, Ritu, Kenwright, Alan M., Ansell, Chris W. G., Khosravi, Ezat, editor, Yagci, Yusuf, editor, and Savelyev, Yuri, editor
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- 2009
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3. Hydration and ion-binding of glycine betaine: How they may be involved into protection of proteins under abiotic stresses.
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Fedotova, Marina V. and Kruchinin, Sergey E.
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HYDRATION , *BETAINE , *ABIOTIC stress , *DEFENSE reaction (Physiology) , *OSMOSIS - Abstract
Glycine betaine (GB) is a widespread natural osmolyte, which accumulates in the cell cytoplasm to protect structure and function of various proteins and enzymes under osmotic, salinity, or temperature stresses. It is assumed that the hydration of GB is playing an important role in the protective mechanism. However, the details of GB interactions with water surroundings are far from being fully understood. In this contribution, the hydration structure of GB under effects of concentration, temperature, and NaCl/KCl additions, as well as ion-binding of this zwitterionic compound was studied to gain information on the functioning of GB in particular and of osmolytes in general. The data were obtained by the integral equation method in the framework of the 1D- and 3D-RISM (Reference Interaction Site Model) approaches. An attempt was made to link the structural features of hydration and ion-binding of GB to its biological role. It was found that under osmolyte concentration effect, as well as under temperature and salinity stresses, GB molecules are strongly hydrated, revealing the strong ability of the osmolyte to bind a significant amount of water. These results are a confirmation for the stabilizing effect of GB on proteins under abiotic stresses via an indirect mechanism. Moreover, the salt additions stimulate the formation of direct ion-molecular associates between the charged groups of GB and inorganic ions as a result of ion-specific interactions. In our opinion, the ability of GB to retain the inorganic ions around itself is directly related to the protection of proteins from salting-out. [ABSTRACT FROM AUTHOR]
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- 2017
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4. Binding of Cobaltocenium-Containing Polyelectrolytes with Anionic Probes.
- Author
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Pageni, Parasmani, Kabir, Mohammad, Yang, Peng, and Tang, Chuanbing
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COBALT compounds , *POLYELECTROLYTES , *ANIONS , *INTERMOLECULAR interactions , *QUATERNARY ammonium compounds - Abstract
Cationic cobaltocenium-containing polyelectrolytes have a unique ability to form ionic complex with various anionic species. We carried out two sets of model study to compare the relative binding strength of a cobaltocenium-containing polyelectrolyte. First, the nature and relative strength of intermolecular interaction between cobaltocenium-containing polyelectrolytes and different anionic probes were investigated by spectroscopic methods. A dye-displacement method was used to monitor absorbance and fluorescence emissions. Second, the binding strength of this cobaltocenium-containing polyelectrolyte was compared with a classical quaternary ammonium polymer. Formation of polyelectrolyte complex between the cobaltocenium-containing polyelectrolyte and a common anionic polyelectrolyte at various concentrations was examined by optical absorption and light scattering. Graphical Abstract: [ABSTRACT FROM AUTHOR]
- Published
- 2017
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5. Probing the Ion Binding Site in a DNA Holliday Junction Using Förster Resonance Energy Transfer (FRET).
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Litke, Jacob L., Yan Li, Nocka, Laura M., and Mukerji, Ishita
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HOLLIDAY junctions , *NUCLEIC acids , *FLUORESCENCE resonance energy transfer , *GENETIC recombination , *ENERGY transfer , *FLUORESCENCE microscopy - Abstract
Holliday Junctions are critical DNA intermediates central to double strand break repair and homologous recombination. The junctions can adopt two general forms: open and stacked-X, which are induced by protein or ion binding. In this work, fluorescence spectroscopy, metal ion luminescence and thermodynamic measurements are used to elucidate the ion binding site and the mechanism of junction conformational change. Förster resonance energy transfer measurements of end-labeled junctions monitored junction conformation and ion binding affinity, and reported higher affinities for multi-valent ions. Thermodynamic measurements provided evidence for two classes of binding sites. The higher affinity ion-binding interaction is an enthalpy driven process with an apparent stoichiometry of 2.1 ± 0.2. As revealed by Eu3+ luminescence, this binding class is homogeneous, and results in slight dehydration of the ion with one direct coordination site to the junction. Luminescence resonance energy transfer experiments confirmed the presence of two ions and indicated they are 6-7 Å apart. These findings are in good agreement with previous molecular dynamics simulations, which identified two symmetrical regions of high ion density in the center of stacked junctions. These results support a model in which site-specific binding of two ions in close proximity is required for folding of DNA Holliday junctions into the stacked-X conformation. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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6. Ion-selective interactions of biologically relevant inorganic ions with alanine zwitterion: a 3D-RISM study.
- Author
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Fedotova, Marina and Dmitrieva, Olga
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ALANINE , *ZWITTERIONS , *ION-molecule collisions , *SALTWATER solutions , *ELECTROLYTES - Abstract
The ion-molecular association between inorganic ions and the charged groups of alanine zwitterion in biologically relevant aqueous salt solutions, namely NaCl(aq), KCl(aq), MgCl(aq), and CaCl(aq), has been investigated over a wide range of electrolyte concentration. The influence of salt concentration on the stability of the formed ion-molecular associates is analyzed. The structure of the formed aggregates and its dependence on salt concentration and chemical nature of the inorganic ion are discussed. [ABSTRACT FROM AUTHOR]
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- 2015
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7. Bichromophoric rhodamine-rhenium(I) and -iridium(III) sensory system: Synthesis, characterizations, photophysical and selective metal ions binding studies.
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Wong, Keith Man-Chung, Wang, Chunyan, Lam, Ho-Chuen, and Zhu, Nianyong
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CHROMOPHORES , *METAL ions , *RHODAMINES , *IRIDIUM compounds , *COLORIMETRY , *LUMINESCENT probes - Abstract
A new class of rhenium(I) tricarbonyl diimine complexes containing rhodamine derivative as a sensory moiety, have been synthesized and characterized. Their photophysical and selective ion-binding properties have also been investigated, with the comparison of the previously reported cyclometalated iridium(III) system. One of the complex was found to exhibit selective binding toward Hg(II) ion with electronic absorption and emission spectral changes. On the other hand, the iridium(III) complexes were found to give similar electronic absorption response but different emission spectral changes upon addition of Hg(II) ion. Interestingly, efficient intramolecular energy transfer from rhodamine 6G to the cyclometalated iridium(III) moiety was suggested in one of the complexes, which could be modulated by selective ion-binding process upon ring-opening of rhodamine 6G. This report shows that the modification of rhodamine derivatives and the choice of transition metal ion could be important to influence the selective binding properties for development of colorimetric and/or luminescent probe. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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8. Fluorescent chemosensors containing ruthenium(II) bipyridine as fluorogenic unit and modified calix[4]arene as ionophore: Synthesis, characterization, electrochemistry and ion-binding property.
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Patra, Subrata, Boricha, Vinod P., and Paul, Parimal
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ELECTROCHEMISTRY , *RUTHENIUM , *BIPYRIDINE , *RUTHENIUM compounds , *FLUOROPOLYMERS , *BINDING constant , *REDUCTION potential - Abstract
[Display omitted] • Metallo-receptors containing Ru(II)-bipyridine and calix[4]arene-azacrown are synthesized. • These receptors exhibit strong MLCT absorption maxima at 456 nm and 3MLCT emission band at 614 nm. • Electroanalysis revealed Ru(II) oxidation at 1.23 to 1.30 V and bpy reductions at −1.36 to −1.89 V. • Ion-binding study revealed that the receptors bind Hg2+, Pb2+, H 2 PO 4 − and F− among various ions. • Binding constants calculated from the titration data are in the order of Hg2+ > Pb2+ > H 2 PO 4 − > F−. A series of metallo-receptors containing ruthenium(II) bipyridine moiety as signaling unit and calix[4]arene coupled with azacrown as ionophore have been synthesized and characterized. These molecules exhibit metal to ligand charge transfer (MLCT) absorption band at 456 nm and 3MLCT luminescence band at 614 nm. Electrochemical study revealed that the Ru(II) of these complexes oxidize in the potential range + 1.23 to + 1.30 V and the ligands exhibit three redox waves in the potential −1.36 to −1.89 V. Ion-binding property of these molecules has been studied using a large number of metal ions and anions with the aid of luminescence spectral change, which revealed that all of the three receptors bind Hg2+ and Pb2+ strongly, as evident from the enhancement in emission intensity with red shift of λ max. Among anions, H 2 PO 4 − and F− exhibited substantial quenching in emission intensity, suggesting their strong interaction with the receptors. To evaluate the binding constants (K s), luminescence titration of the receptor molecules with the strongly interacting ions have been performed and the K s values have been calculated from the titration data. The K s values are in the range 4.77 × 104 to 1.20 × 103 M−1 with descending order of Hg2+ > Pb2+ > H 2 PO 4 − > F−. For anions, 1H NMR spectral change were recorded with incremental addition of anions, the results obtained are discussed in light of ion-binding property and mechanism of interaction. [ABSTRACT FROM AUTHOR]
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- 2022
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9. The use of assemblage models to describe trace element partitioning, speciation, and fate: A review.
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Groenenberg, Jan E. and Lofts, Stephen
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TRACE element content of soils , *TRACE elements in water , *ORGANIC compounds , *METALLIC oxides , *COMPLEXATION reactions , *GEOSPATIAL data - Abstract
The fate of trace elements in soils, sediments, and surface waters is largely determined by their binding to reactive components, of which organic matter, metal oxides, and clays are considered most important. Assemblage models, combining separate mechanistic complexation models for each of the reactive components, can be used to predict the solid-solution partitioning and speciation of trace elements in natural environments. In the present review, the authors provide a short overview of advanced ion-binding models for organic matter and oxides and of their application to artificial and natural assemblages. Modeling of artificial assemblages of mineral components and organic matter indicates that the interactions between organic and mineral components are important for trace element binding, particularly for oxyanions. The modeling of solid-solution partitioning in natural systems is generally adequate for metal cations but less so for oxyanions, probably because of the neglect of organic matter-oxide interactions in most assemblage models. The characterization of natural assemblages in terms of their components (active organic matter, reactive oxide surface) is key to successful model applications. Improved methods for characterization of reactive components in situ will enhance the applicability of assemblage models. Collection of compositional data for soil and water archetypes, or the development of relationships to estimate compositions from geospatially available data, will further facilitate assemblage model use for predictive purposes. Environ Toxicol Chem 2014;33:2181-2196. © 2014 SETAC [ABSTRACT FROM AUTHOR]
- Published
- 2014
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10. Ion-binding of glycine zwitterion with inorganic ions in biologically relevant aqueous electrolyte solutions.
- Author
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Fedotova, Marina V. and Kruchinin, Sergey E.
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GLYCINE , *ZWITTERIONS , *INORGANIC chemistry , *FUNCTIONAL groups , *AQUEOUS electrolytes , *AQUEOUS solutions - Abstract
Abstract: The ion-binding between inorganic ions and charged functional groups of glycine zwitter-ion in NaCl(aq), KCl(aq), MgCl2(aq), and CaCl2(aq) has been investigated over a wide salt concentration range by using integral equation theory in the 3D-RISM approach. These systems mimic biological systems where binding of ions to charged residues at protein surfaces is relevant. It has been found that the stability of ion pairs formed by the carboxylate group and added inorganic cations decreases in the sequence Mg2+ >Ca2+ >Na+ >K+. However, all formed ion pairs are weak and decrease in stability with increasing salt concentration. On the other hand, at a given salt concentration the stability of (−NH3 +:Cl−)aq ion pairs is similar in all studied systems. The features of ion-binding and the salt concentration effect on this process are discussed. [Copyright &y& Elsevier]
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- 2014
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11. Influence of the hydrophobic groups and the nature of counterions on ion-binding in aliphatic ionene solutions
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Rodič, Peter, Bratuša, Marsel, Lukšič, Miha, Vlachy, Vojko, and Hribar-Lee, Barbara
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HYDROPHOBIC compounds , *IONS , *ALIPHATIC compounds , *SOLUTION (Chemistry) , *BINDING agents , *FLUORIDES , *BROMIDES , *AQUEOUS solutions - Abstract
Abstract: Transport and binding capabilities in aqueous solutions of 3,3-, 6,6-, and 6,9-ionene fluorides and bromides at 25°C were explored through the experimentally determined values for transport numbers of counterions and polyion constituents, along with the data for electrical conductivity in these solutions. Within the association theory, the fractions of free counterions and the effective linear charge densities of polyions were calculated. Experimental data were compared with the predictions of the Manning theory of polyelectrolyte solutions. It was determined that binding of the counterions to the polyion critically depends (i) on charge density of the polyion and (ii) on the chemical nature of the counterion in question. The effects of the charge density are the strongest in solutions of ionene bromides. Differences in the behavior of solutions of ionene fluorides and bromides are the consequence of different hydration capabilities of these ions. The effective linear charge density was found to be much lower than the one predicted from structural parameters of ionenes. The study addresses questions important to the biomedical field, in particular that of binding of ligands to charged macromolecules. [Copyright &y& Elsevier]
- Published
- 2013
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12. Calix Receptor Edifice; Scrupulous Turn Off Fluorescent Sensor for Fe(III), Co(II) and Cu(II).
- Author
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Bhatt, Keyur, Gupte, Hrishikesh, Makwana, Bharat, Vyas, Disha, Maity, Debdeep, and Jain, Vinod
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IRON compound synthesis , *FLUORESCENCE spectroscopy , *SUPRAMOLECULAR chemistry , *CHROMATOGRAPHIC analysis , *FLUORESCENCE quenching , *METAL complexes - Abstract
Novel Supramolecular fluorescence receptor derived from calix-system i.e. calix[4]resorcinarene bearing dansylchloride as fluorophore was designed and synthesized. The compound was purified by column chromatography and characterized by elemental analysis, NMR and Mass spectroscopy. Tetradansylated calix[4] resorcinarene ( TDCR) shows a boat conformation with Cv symmetry. The complexation behaviour of metal cations [Ag(I), Cd(II), Co(II), Fe(III), Hg(II), Cu(II), Pb(II), Zn(II), U(VI) (1 × 10 M)] with tetra dansylated calix[4]resorcinarene (1 × 10 M) was studied by spectophotometry and spectrofluorometry. Red shift in the absorption spectra led us to conclude that there is strong complexation Fe(III), Co(II) and Cu(II) with TDCR. These metal cations also produce quenching with red shifts in the emission spectra. The maximum quenching in emission intensity was observed in the case of Fe(III) and its binding constant was also found to be significantly higher than that of Co(II) and Cu(II). Quantum yield of metal complexes of Fe(III) was found to be lower in comparison with Co(II) and Cu(II) complexes. Stern Volmer analysis indicates that the mechanism of fluorescence quenching is either purely dynamic, or purely static. [ABSTRACT FROM AUTHOR]
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- 2012
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13. Luminescent metalloreceptors with pendant macrocyclic ionophores with NS2O3 donor sites: Synthesis, characterization and ion-binding property
- Author
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Boricha, Vinod P., Patra, Subrata, Parihar, Sanjay, Chouhan, Yogendra S., and Paul, Parimal
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MACROCYCLIC compounds , *IONOPHORES , *LUMINESCENCE , *METAL complexes , *COMPLEX compounds synthesis , *BIPYRIDINE , *ORGANORUTHENIUM compounds , *METAL ions - Abstract
Abstract: Three new luminescent metalloreceptors have been synthesized, incorporating the Ru(II)-bipyridine moiety as a fluorogenic unit and a six membered macrocyclic moiety containing NS2O3 donor atoms as ionophores. The sulfur donor atoms have been incorporated to enhance the complexing ability of the ionophore towards heavy metal ions, although for comparison, an ionophore having NO5 donor sites has also been used. The ion-binding property of these fluoroionophores has been investigated with a large number of cations and anions, and the recognition event is monitored by fluorescence and NMR spectroscopy. The luminescence intensity is strongly quenched in the presence of Cu2+and Fe3+ for 1; Cu2+, Fe3+, Hg2+ and Pb2+ for 2 and with Cu2+ for 3, indicating strong complexation of these metal ions with the ionophore. The fluoroionophore 2 also exhibited strong interactions with the anions F−, H2PO4 − and I−. A 1H NMR study was carried out to get information about the binding site of the ions with the ionophores. Binding constants (Ks ) and the composition of the complexes formed for all the three fluoroionophores with strongly interacting ions have been determined from emission titration data. The Ks values for the metal ions are in the range 3.19×102–8.86×103 M−1 and for anions they are in the range 8.89×102–5.33×103 M−1. The ion-selectivity and energy transfer involved in quenching process have been discussed. [Copyright &y& Elsevier]
- Published
- 2012
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14. Calix[4]arene based molecular sensors with pyrene as fluoregenic unit: Effect of solvent in ion selectivity and colorimetric detection of fluoride
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Maity, Debdeep, Chakraborty, Ashish, Gunupuru, Ravi, and Paul, Parimal
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CALIXARENES , *ELECTROCHEMICAL sensors , *PYRENE , *FLUORIDES , *ACETONITRILE , *NUCLEAR magnetic resonance spectroscopy , *FLUORESCENCE , *CHARGE exchange , *METAL ions - Abstract
Abstract: Fluorescent molecular sensors having excimer emission property have been designed and synthesised incorporating calix[4]arene derivatives in cone and 1,3-alternate conformation as ionophore and two pyrene moieties at close proximity as fluorophore. They exhibit strong excimer emission around 515nm, which is used to monitor interaction of metal ions with the ionophores. Ion-binding study of these fluoroionophore has been investigated in acetonitrile–chloroform and THF–H2O with a wide range of cations and anions and the recognition process is monitored by luminescence, UV–Vis and 1H NMR (for F−) spectral changes. The present study demonstrated profound influence of solvent in ion selectivity, in acetonitrile–chloroform they formed complexes with Hg2+, Pb2+, Cu2+ and Ni2+, whereas in THF–H2O they exhibit selectivity only for Cu2+. In the case of anions, selectivity for only F− with color change is observed. Composition of the complexes formed was determined from mass spectrometry and the binding constants were determined from fluorescence titration data. The reasons for formation of excimer emission, quenching of it in presence of certain metal ions, role of solvent in selectivity and energy/electron transfer process involved in the ion-recognition event have been discussed on the basis of experimental data. [Copyright &y& Elsevier]
- Published
- 2011
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15. Cloning, expression, purification and activation by Na ion of halophilic alkaline phosphatase from moderate halophile Halomonas sp. 593
- Author
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Ishibashi, Matsujiro, Oda, Kazuki, Arakawa, Tsutomu, and Tokunaga, Masao
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MOLECULAR cloning , *GENE expression , *ALKALINE phosphatase , *HALOPHILIC microorganisms , *AMINO acid sequence , *ESCHERICHIA coli , *GEL permeation chromatography , *SODIUM ions - Abstract
Abstract: We have succeeded in the cloning of alkaline phosphatase gene, haalp, from moderate halophile Halomonas sp. 593. A deduced amino acid sequence showed a high ratio of acidic to basic amino acids, characteristic of halophilic proteins. The gene product was efficiently expressed in Escherichia coli BL21 Star (DE3) pLysS, but in an inactive form. The purified recombinant HaALP was separated into four fractions by gel filtration. When they were dialyzed against 50mM Tris–HCl (pH 8.0)/2mM MgCl2 buffer containing 3M NaCl, one of these four fractions was activated to almost full activity. This fraction contained a folding intermediate that was converted to the native structure by the salt. Among the additional salts tested, i.e., KCl, KBr, LiCl, MgCl2, (NH4)2SO4, and Na2SO4, only Na2SO4 was effective, suggesting the importance of Na ion. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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16. Synthesis and anion-sensing property of a family of Ru(II)-based receptors containing functionalized polypyridine as binding site
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Chakraborty, Ashish, Gunupuru, Ravi, Maity, Debdeep, Patra, Subrata, Suresh, E., and Paul, Parimal
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INORGANIC synthesis , *CRYSTALLOGRAPHY , *ANIONS , *LUMINESCENCE , *NUCLEAR magnetic resonance , *RUTHENIUM compounds , *COMPLEX compounds , *CHELATES - Abstract
Abstract: A family of fluoroionophores have been synthesized incorporating Ru(II)-bipyridine moiety as fluorogenic unit and amino/benzenesulphonamido functionalized 1,10-phenanthroline moiety, attached to Ru(II), as binding sites. Two of the ligands and one of the complexes have been characterized crystallographically. Anion recognition property, studied by luminescence, UV–vis and 1H NMR spectroscopy, with a large number of anions exhibit strong complexation with F−, H2PO4 − and AcO−. Binding constants have been determined from luminescence titration and 1H NMR study gave insight about binding site of anions. Bidentate chelating nature of the H2PO4 − and AcO− anions and steric crowding created by benzenesulphonamide moiety has significantly influenced binding constants and selectivity. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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17. Luminescent metalloreceptors with pendant macrocyclic ionophore: Synthesis, characterization, electrochemistry and ion-binding study
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Patra, Subrata, Boricha, Vinod P., Sreenidhi, K.R., Suresh, E., and Paul, Parimal
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LUMINESCENCE , *MACROCYCLIC compounds , *IONOPHORES , *ORGANORUTHENIUM compounds , *BIPYRIDINE , *METAL ions , *COMPLEX compounds synthesis , *ELECTROCHEMISTRY - Abstract
Abstract: Metalloreceptors containing ruthenium(II) bipyridine unit as fluorophore and pendant macrocyclic units as ionophore have been synthesized and their luminescence and electrochemical properties have been investigated. Ion-binding study of these fluoroionophore with the anions F−, Cl−, Br−, I−, , , , , CH3COO−, and and cations Na+, K+, Mg2+, Ca2+, Zn2+, Ba2+, Sr2+ Cd2+, Hg2+, Pb2+ and Cu2+, monitored by luminescence and 1H NMR spectral changes, reveal strong interactions of and F− for 2 and 3 and of Cu2+ only for 3. Luminescence titrations for 2 and 3 have been carried out to determine binding constants (Ks ), and the calculated values are in the range 2.85×102 to 4.48×104 M−1. The 1H NMR spectral changes for 2 and 3 with the addition of increasing concentration of F− and exhibit substantial low-field shift of the CONH proton indicating its involvement in complex formation with the anions. The adduct of 2 and 3 have been isolated and characterized by 1H and 31P NMR, mass and IR spectroscopy. The results are discussed in light of selectivity, structures of the anion bound complexes and their luminescence property. [Copyright &y& Elsevier]
- Published
- 2010
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18. Calix(aza)crowns: synthesis, recognition, and coordination. A mini review
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Oueslati, Issam
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AROMATIC compounds , *CALIXARENES , *IONS , *PHYSICAL & theoretical chemistry - Abstract
Abstract: Attaching azacrown bridges on calixarene platform generates calix(aza)crown family. This article reviews synthetic routes for their design and discusses their ion-binding properties by means of coordination and stability constants. [Copyright &y& Elsevier]
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- 2007
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19. Calix[4]azacrowns: self-assembly and effect of chain length and O-alkylation on their metal ion-binding properties
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Oueslati, Issam, Thuéry, Pierre, Shkurenko, Oleksandr, Suwinska, Kinga, Harrowfield, Jack M., Abidi, Rym, and Vicens, Jacques
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ALKYLATION , *CHEMICAL reactions , *AROMATIC compounds , *CHLOROHYDROCARBONS - Abstract
Abstract: Both the consequences of 1,3-cyclization of calix[4]arenes by diamide formation, and the effect of 2- and 2,4-alkoxycarbonylmethylation of two 1,3-bridged calix[4]azacrowns on their metal ion-binding capacities have been studied by synthesis of the derivatives in their cone conformation and measurement of the stability constants for their complexation in a range of alkaline earth and transition metal cations. In these two cases, the conformation of the ligand in the solid state has been defined in detail by a crystal structure determination. In the first case, a tubular architecture performing methanol channels is displayed, however, in the second case a zigzag architecture generated by a chloroform network connecting calixarene molecules is present. Speciation in solution appears to be limited to the formation of 1:2 and/or 1:1 and/or 2:1 (M–L) complexes, depending on the system, with values of the stability constants determined by absorption spectroscopy in acetonitrile, lying in the ranges log β 12 ca. 10, log β 11 ca. 2–5, and log β 21 ca. 7–9. There is evidence for selectivity toward Cu(II) and for some unexpected anion effects. None of these ligands appear to be an efficient extractant for the metals as their picrate. [Copyright &y& Elsevier]
- Published
- 2007
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20. Synthesis and properties of calix[4]crown-6 functionalized polymers.
- Author
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Kim, Su-Han, Lee, Chil-Won, Jeon, Young-Min, and Gong, Myoung-Seon
- Abstract
Calix[4]crown-6-2,4-bis(4-aminobutyl ether), which has a crown-6 moiety at the 1,3-position and amino function at the 2,4-position, was prepared as an intermediate for the subsequent synthesis of calix[4]crown-6-containing polyamide and polyimide using adipoyl chloride and 1,2,4,5-benzenetetracarboxylic dianhydride. The chemical structures were characterized by IR,H NMR spectroscopy and elemental analysis, and some of their physical properties, including their thermal behavior, were examined. The ion binding characteristics of the monomer and polymers for alkali metal and alkali earth metal ions were measured by liquid-liquid extraction from the aqueous phase into the organic phase. It has been observed that polyamide has a high binding ability towards various metal cations as compared to polyimide, which showed cesium ion selectivity. [ABSTRACT FROM AUTHOR]
- Published
- 2005
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21. Synthesis and binding properties of a calix[4]crown-6-functionalized polymeric ion acceptor.
- Author
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Seol, Wan-Ho, Yang, Yu-Sun, Lee, Chil-Won, and Gong, Myoung-Seon
- Abstract
Calix[4]crown-6-2,4-bis(2-hydroxyethyl ether) ( 2), which has crown-6 moieties at the 1- and 3-positions and hydroxyethyl functions at the 2- and 4-positions, was prepared for the syntheses of polyester 3 and polyurethane 4 by reactions with adipoyl chloride and hexamethylene diisocyanate, respectively. The ion binding characteristics of monomer 2 and polymers 3 and 4 toward alkali and alkali earth metal ions were measured by liquid-liquid extraction from the aqueous phase into the organic phase. We observed that the polyurethane 4 has a higher binding affinity toward various metal cations when compared to polyester 3, which exhibits cesium ion selectivity. [ABSTRACT FROM AUTHOR]
- Published
- 2004
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22. Synthesis, structure, and ion-binding studies of cobalt(II) complexes with aza-crown substituted salicylaldimine Schiff base ligand
- Author
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Lu, Xiao-Xia, Qin, Sheng-Ying, Zhou, Zhong-Yuan, and Yam, Vivian Wing-Wah
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COBALT compounds , *ALKALINE earth metals - Abstract
A series of cobalt(II) complexes with azacrown ether-containing salicylaldimine Schiff base ligand Co(L1), Co(L2)2 and Co(L3)2 has been successfully synthesized. The cation-binding properties of the complexes have been studied and the stability constants with alkali and alkaline earth metal cations determined. Synthesis of the complexes with monoaza-12-crown-4, Co(L1) and Co(L2)2, allows for a direct comparison of the cation binding properties between the mono- and bis-Schiff base systems as well as with the complex containing the monoaza-15-crown-5 pendant, i.e. Co(L3)2, which has a different crown size. The X-ray crystal structure of Co(L3)2 has also been determined. [Copyright &y& Elsevier]
- Published
- 2003
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23. Synthesis, luminescence and host–guest chemistry of copper(I) and zinc(II) complexes of dppzc (dppzc=dipyrido[3,2-a:2′,3′-c]phenazo-15-crown-5)
- Author
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Yam, Vivian Wing-Wah, Pui, Yung-Lin, and Cheung, Kung-Kai
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COPPER , *ZINC , *METAL complexes , *ELECTROCHEMISTRY - Abstract
Copper(I) and zinc(II) complexes containing dipyrido[3,2-a:2′,3′-c]phenazo-15-crown-5 (dppzc) ligand have been synthesized and characterized, and their photophysics and electrochemistry studied. The crystal structure of [Zn(SC6H4&z.sbnd;CH3-p)2(dppzc)] (2) has been determined. The ion-binding properties of these complexes towards alkali metal ions have also been described. [Copyright &y& Elsevier]
- Published
- 2002
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24. Conformation and ion-binding of oligonucleotides
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Kontturi, Anna-Kaisa, Kontturi, Kyösti, and Urtti, Arto
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OLIGONUCLEOTIDES , *CONFORMATIONAL analysis , *DRUGS - Abstract
The effective charge and the conformation of oligonucleotides may influence their pharmaceutical properties. Therefore, a method based on the convective diffusion process was used to measure both the diffusion coefficient and the effective charge number of four oligonucleotides with different chain lengths. Determinations were carried out at physiological ionic strength and at two temperatures, 20 and 40 °C. The results indicate that the longer oligonucleotides, i.e. number of nucleotides in the molecule from 15 to 30, are strongly ion-paired (75–80%) and the shorter oligonucleotide (seven nucleotides) is only ca. 50% ion-paired. The extent of ion-binding was not dependent on temperature. The conformation of the oligonucleotides appeared to be fairly compact in 0.15 M NaCl solution. The compact conformation and strong ion-pairing may influence the pharmacokinetics of oligonucleotides, possibly facilitating distribution into tissues. [Copyright &y& Elsevier]
- Published
- 2002
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25. Ion-binding ameliorates the organic solvents nanofiltration performance of poly (butyl acrylamide-co-divinylbenzene) composites.
- Author
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Alwan Almijbilee, Muntadher M., Wang, Yifei, Peng, Mao, Kong, Aiqun, Zhang, Jinli, and Li, Wei
- Subjects
- *
NANOFILTRATION , *ACRYLAMIDE , *DENSITY functional theory , *METAL ions , *MONOMERS - Abstract
• Poly (butyl acrylamide-co-divinylbenzene) nanofiltration membrane was synthesized. • The toplayer regularly distributed oxygen and nitrogen groups to anchor metal ions. • Fe-binding treatment enhanced the permeance and dye rejection in organic solvents. • Changes of the void size and the charge density in the toplayer were disclosed. A new nanofiltration composite membrane poly (butyl acrylamide-co-divinylbenzene) (poly-TaDb) was synthesized via a facile photopolymerization on polyetherimide using the monomers of n- tert -butyl acrylamide and divinylbenzene, and evaluated the separation performance in organic solutions. The unique poly-TaDb toplayer has a feature of branch structure containing regularly distributed oxygen and nitrogen groups that work as the interacting sites with metal ions (Fe3+, Zn2+, and Cu2+), as reflected by the characterizations of ATR-FTIR, XPS, AFM, etc. Without the metal ion treatment, the optimal poly-TaDb membrane shows the permeance of 31, 17, 20.4 L m−2h−1 MPa−1 respectively for organic solutions of tetrahydrofuran (THF), methanol (MeOH) and acetonitrile (ACN), with the rejection rates higher than 90% toward EB dye (879.8 g.mol−1). After interacting with these metal ions, the obtained Fe-binding poly-TaDb membranes possess higher permeance, with the THF, MeOH, and ACN permeance enhanced respectively to 113, 35, and 24.2 L m−2h−1 MPa−1, meanwhile maintaining high dye rejection rate. While the Cu- and Zn-binding membranes show much higher permeance but lower dye rejection rate. Density functional theory (DFT) calculations disclose that the void size of the toplayer network increases in the order of: the pristine (11.40 Å) < Fe-binding (11.54 Å) < Zn-binding (11.60 Å) < Cu-binding membrane (11.63 Å). It is the suitable void size and charge density distribution in the toplayer network of Fe-binding membrane. that results in the superior nanofiltration performance. This work provides a facile route to explore new polymeric network materials for highly effective separation performance in organic solvents. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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26. Equilibrium dialysis and ultrafiltration studies of calcium and phosphate binding by human salivary proteins. Implications for salivary supersaturation with respect to calcium phosphate salts.
- Author
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Hay, D., Schluckebier, S., and Moreno, E.
- Abstract
Previous ultrafiltration studies indicated that up to one-half of the calcium and two-thirds of the phosphate in human salivary secretions may be bound by salivary proteins. Since this binding is an important variable in determining the extent of salivary supersaturation with respect to calcium phosphate salts, and since the amount of binding reported is surprisingly large, calcium and phosphate ion-binding by salivary macromolecules has been reexamined. From experiments using equilibrium dialysis, it was found that (1) the fraction of salivary calcium involved in macromolecular complexes ranges from a few percent for unstimulated secretions, to no more than about 10% for stimulated glandular salivas, and (2) salivary proteins do not bind phosphate ions to any significant extent. These findings, and experiments using an improved ultrafiltration membrane, indicate that the earlier results were artifacts of the ultrafiltration technique. Fractionation of salivary proteins, followed by equilibrium dialysis measurements, showed that the anionic proline-rich proteins and a basic proline-rich glycoprotein are responsible for most of the calcium binding now observed. The finding that macromolecular complexes of salivary calcium and phosphate have been overestimated in the past, leads to the conclusion that salivary calcium and phosphate ion activities in stimulated salivary secretions may be up to 50 to 100% higher than previously thought. Revised values were therefore used to recalculate the degree of salivary supersaturation with respect to calcium phosphate salts. The results indicate that stimulated salivary secretions are supersaturated with respect to dicalcium phosphate dihydrate; this is a substantially greater degree of supersaturation than previously reported. [ABSTRACT FROM AUTHOR]
- Published
- 1982
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27. Fourier transform infrared spectroscopic study of ion binding and intramolecular interactions in the polar head of digalactosyldiacylglycerol.
- Author
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Menikh, A. and Fragata, M.
- Abstract
Lipid bilayers composed of digalactosyldiacyl-glycerol (DGDG), that is, Gal pα1-6Gal pβ1-3DAG, a non-ionic lipid of the thylakoid membrane of chloroplasts, aggregate in aqueous media containing mono- and divalent cations in amounts above a threshold concentration (C) of about 1.0, 4.7 and 10.0 mM for Ca, Mg and Na, respectively. In this work, we found that above C the DGDG membranes do not undergo fusion and that the aggregation can be reversed, or disrupted. This means that the perturbation induced by the salts results from adsorption, or complexation of the ions in the polar head of DGDG. To investigate this question, we used Fourier transform infrared (FTIR) spectroscopy to identify the molecular sites in DGDG which are modified by interaction, or adduct formation with CaCl, MgCl and NaCl. We also determined whether the ions affect the intramolecular hydrogen bonding between the sn ester C = O and the carbon-6 of the α-anomer of galactose (Gal). The major conclusions are: ( i) the salts do not affect, at least directly, the, ester carbonyl region of DGDG, ( ii) the most probable sites of binding, or adsorption, for the ions are the ring oxygen, and ( iii) the ring hydroxyls are the sites of either ion complexation or intra- and intermolecular H-bonding in interacting DGDG membranes. Within this framework, the complexation of the ions with Gal might induce total or partial dehydration of the galactolipid headgroup and thus provides the means to overcome the repulsive hydration forces that hinder aggregation of the DGDG membranes. [ABSTRACT FROM AUTHOR]
- Published
- 1993
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28. A minimum mechanism for Na+-Ca++ exchange: net and unidirectional Ca++ fluxes as functions of ion composition and membrane potential.
- Author
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Johnson, Edward, Kootsey, J., Johnson, E A, and Kootsey, J M
- Subjects
CALCIUM metabolism ,NEURAL physiology ,SODIUM metabolism ,PURKINJE fibers ,ANIMAL experimentation ,BIOLOGICAL models ,BIOLOGICAL transport ,COMPARATIVE studies ,DYNAMICS ,ELECTROPHYSIOLOGY ,MATHEMATICS ,RESEARCH methodology ,MEDICAL cooperation ,MOLLUSKS ,RESEARCH ,RESEARCH funding ,SHEEP ,EVALUATION research ,PHYSIOLOGY - Abstract
Both simultaneous and consecutive mechanisms for Na+-Ca++ exchange are formulated and the associated systems of steady-state equations are solved numerically, and the net and unidirectional Ca++ fluxes computed for a variety of ionic and electrical boundary conditions. A simultaneous mechanism is shown to be consistent with a broad range of experimental data from the squid giant axon, cardiac muscle and isolated sarcolemmal vesicles. In this mechanism, random binding of three Na+ ions and one Ca++ on apposing sides of a membrane are required before a conformational change can occur, translocating the binding sites to the opposite sides of the membranes. A similar (return) translocation step is also permitted if all the sites are empty. None of the other states of binding can undergo such translocating conformational changes. The resulting reaction scheme has 22 reaction steps involving 16 ion-binding intermediates. The voltage dependence of the equilibrium constant for the overall reaction, required by the 3:1 Na+: Ca++ stoichiometry was obtained by multiplying and dividing, respectively, the forward and reverse rate constants of one of the translocational steps by exp(-FV/2RT). With reasonable values for the membrane density of the enzyme (approximately 120 sites micron 2) and an upper limit for the rate constants of both translocational steps of 10(5) . sec-1, satisfactory behavior was obtainable with identical binding constants for Ca++ on the two sides of the membrane (10(6) M-1), similar symmetry also being assumed for the Na+ binding constant (12 to 60 M-1). Introduction of order into the ion-binding process eliminates behavior that is consistent with experimental findings. [ABSTRACT FROM AUTHOR]
- Published
- 1985
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29. Chapter 11 - Models of Geochemical Speciation: Structure and Applications
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Di Bonito M, Stephen Lofts, Jan E. Groenenberg, Benedetto De Vivo, Harvey E. Belkin, Annamaria Lima, Di Bonito M, Stephen Loft, and Jan E. Groenenberg
- Subjects
Surface complexation ,Biotic-ligand model ,Bioavailability ,Toxicity ,Speciation ,Modeling ,Thermodynamic databases ,Ion-binding - Abstract
Being able to predict the behavior of trace elements in the environment is crucial for environmental risk assessment studies. For this reason, modeling, in addition to experimental methods, has become an indispensable tool to better understand the (bio)-geochemistry of trace elements and the processes involved in their availability, transport and ecotoxicity. In this chapter we briefly outline the development of geochemical modeling over time and its basic principles. A comprehensive description of the state-of-the-art ion-binding and surface complexation models presently available for dissolved and particulate organic matter, metal (hydr)oxides of aluminum, iron, manganese and silica and clay minerals is given. A significant part of this chapter is dedicated to the application of these models for studying surface waters and soils. The most common model platforms used for this purpose together with the available (thermodynamic) databases of model parameters are summarized. In two separate sections we highlight the application of an assemblage model (with submodels for the various adsorbents) to describe trace element solid-solution partitioning and speciation in surface waters and soils; here particular attention is given to the derivation of site-specific inputs concerning the geochemical reactive metal content and the contents of adsorbents metal (hydr)oxides, clay and organic matter). Consideration is therefore given to the most recent developments in bio-geochemical modeling to link metal speciation to bioavailability, biotic accumulation and toxicity. Finally, future prospects of geochemical modeling are discussed, giving an overview of the potential directions for development.
- Published
- 2018
30. Models of Geochemical Speciation: Structure and Applications
- Author
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Marcello Di Bonito, Sthephen Lofts, and Jan E. Groenenberg
- Subjects
Bodemscheikunde en Chemische Bodemkwaliteit ,Bioavailability ,Speciation ,010501 environmental sciences ,010502 geochemistry & geophysics ,01 natural sciences ,Ion binding ,Biotic-ligand model ,Surface complexation ,Genetic algorithm ,Thermodynamic databases ,Organic matter ,Duurzaam Bodemgebruik ,0105 earth and related environmental sciences ,Geochemical modeling ,Sustainable Soil Use ,chemistry.chemical_classification ,Toxicity ,Modeling ,Trace element ,Biotic Ligand Model ,chemistry ,Environmental chemistry ,Ion-binding ,Clay minerals ,Soil Chemistry and Chemical Soil Quality - Abstract
Being able to predict the behavior of trace elements in the environment is crucial for environmental risk assessment studies. For this reason, modeling, in addition to experimental methods, has become an indispensable tool to better understand the (bio)-geochemistry of trace elements and the processes involved in their availability, transport and ecotoxicity. In this chapter we briefly outline the development of geochemical modeling over time and its basic principles. A comprehensive description of the state-of-the-art ion-binding and surface complexation models presently available for dissolved and particulate organic matter, metal (hydr)oxides of aluminum, iron, manganese and silica and clay minerals is given. A significant part of this chapter is dedicated to the application of these models for studying surface waters and soils. The most common model platforms used for this purpose together with the available (thermodynamic) databases of model parameters are summarized. In two separate sections we highlight the application of an assemblage model (with submodels for the various adsorbents) to describe trace element solid-solution partitioning and speciation in surface waters and soils; here particular attention is given to the derivation of site-specific inputs concerning the geochemical reactive metal content and the contents of adsorbents metal (hydr)oxides, clay and organic matter). Consideration is therefore given to the most recent developments in bio-geochemical modeling to link metal speciation to bioavailability, biotic accumulation and toxicity. Finally, future prospects of geochemical modeling are discussed, giving an overview of the potential directions for development.
- Published
- 2018
- Full Text
- View/download PDF
31. Analysis of the quality of crystallographic data and the limitations of structural models
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Albert Guskov, Dirk Jan Slotboom, Valentina Arkhipova, Molecular Dynamics, and Enzymology
- Subjects
0301 basic medicine ,Physiology ,Computer science ,DEPENDENT ASPARTATE TRANSPORTER ,media_common.quotation_subject ,Amino Acid Transport System X-AG ,EXTRACELLULAR GATE ,Crystallographic data ,Reviews ,ION-BINDING ,Molecular Dynamics Simulation ,Crystallography, X-Ray ,03 medical and health sciences ,Ion binding ,Viewpoint ,X ray methods ,Animals ,Humans ,STRUCTURE REFINEMENT ,Quality (business) ,CRYSTAL-STRUCTURES ,Functional studies ,Reliability (statistics) ,media_common ,Binding Sites ,biology ,Excitatory amino-acid transporter ,Low resolution ,Molecular Docking Simulation ,BINDING-SITE ,Crystallography ,030104 developmental biology ,ESCHERICHIA-COLI ,biology.protein ,BACILLUS-STEAROTHERMOPHILUS ,Biological system ,PYROCOCCUS-HORIKOSHII ,Protein Binding ,GLUTAMATE TRANSPORTER HOMOLOG - Abstract
Arkhipova et al. caution that the limitations of structural models be taken into account when interpreting crystallographic data., Crystal structures provide visual models of biological macromolecules, which are widely used to interpret data from functional studies and generate new mechanistic hypotheses. Because the quality of the collected x-ray diffraction data directly affects the reliability of the structural model, it is essential that the limitations of the models are carefully taken into account when making interpretations. Here we use the available crystal structures of members of the glutamate transporter family to illustrate the importance of inspecting the data that underlie the structural models. Crystal structures of glutamate transporters in multiple different conformations have been solved, but most structures were determined at relatively low resolution, with deposited models based on crystallographic data of moderate quality. We use these examples to demonstrate the extent to which mechanistic interpretations can be made safely.
- Published
- 2017
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32. Isolation and purification treatments change the metal-binding properties of humic acids: effect of HF/HCl treatment
- Author
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Marc F. Benedetti, Wander Gustavo Botero, Michael Pineau, José Paulo Pinheiro, Luciana S. Rocha, Jan E. Groenenberg, Rute F. Domingos, José F.M.L. Mariano, Noémie Janot, Universidade Federal de Alagoas = Federal University of Alagoas (UFAL), Universidade do Algarve (UAlg), Laboratoire Interdisciplinaire des Environnements Continentaux (LIEC), Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Institut national des sciences de l'Univers (INSU - CNRS)-Observatoire Terre et Environnement de Lorraine (OTELo), Institut national des sciences de l'Univers (INSU - CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS), Institut de Physique du Globe de Paris (IPGP), Institut national des sciences de l'Univers (INSU - CNRS)-IPG PARIS-Université de La Réunion (UR)-Centre National de la Recherche Scientifique (CNRS)-Université de Paris (UP), Wageningen University and Research [Wageningen] (WUR), Institut national des sciences de l'Univers (INSU - CNRS)-Observatoire Terre et Environnement de Lorraine (OTELo), Institut national des sciences de l'Univers (INSU - CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Institut Ecologie et Environnement (INEE), and Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Bodemscheikunde en Chemische Bodemkwaliteit ,Substances ,010504 meteorology & atmospheric sciences ,Stripping (chemistry) ,Speciation ,[SDV]Life Sciences [q-bio] ,Inorganic chemistry ,Proton binding ,chemistry.chemical_element ,Context (language use) ,010501 environmental sciences ,01 natural sciences ,Geochemistry and Petrology ,Environmental Chemistry ,Humic acid ,Organic matter ,Duurzaam Bodemgebruik ,Sandy Soil ,Donnan model parameters ,Cu ,0105 earth and related environmental sciences ,Sustainable Soil Use ,chemistry.chemical_classification ,Extraction (chemistry) ,Contamination ,Alkaline-Extracted material ,chemistry ,13. Climate action ,Chemistry (miscellaneous) ,humic acid ,Soil water ,Base properties ,Ion-binding ,Complexation ,Organic-matter ,Carbon ,Soil Chemistry and Chemical Soil Quality - Abstract
Environmental contextStudying the mechanism of binding between metals and natural organic matter is fundamental to understanding the transport and availability of these contaminants in the environment. The influence of sample treatment on the purification of organic matter showed significant differences in the interaction with metals. The results will contribute to improved modelling of metal binding to organic matter in soils, thereby providing a basis for a more realistic risk assessment. AbstractWe studied the changes in metal binding characteristics of extracted humic acids induced by HF/HCl treatment followed by dialysis, i.e. the last step of the International Humic Substances Society (IHSS) extraction protocol. We performed metal binding experiments with both the alkaline-extracted material (AE) and the fully purified (FP) humic acid using the electrochemical stripping technique (AGNES) and modelled the results using the NICA-Donnan model. The results showed an increase of free Zn, Cd and Pb concentrations of similar to 1 order of magnitude for the AE compared with the FP. These differences may be mostly explained by the different carbon content (51.3% FP and 36.5% AE) associated with an AE/FP carboxyl ratio of 0.5. Simulations using the NICA-Donnan model showed that halving the amount of carboxylic groups (Q(max,1)) for the FP reduced this difference to 0.25 log units for Cd and Zn and to 0.15 log unit for Pb. There is a clear need for further research on the differences between purified v. less-disturbed natural organic material, which will contribute to improved modelling of metal binding to organic matter in soils, hence providing a basis for a more realistic risk assessment. Coordenadoria de Aperfeicoamento do Pessoal de Nivel Superior (CAPES CSF) [981313-6] Conselho Nacional de Desenvolvimento Cientifico e Tecnologico (CNPq PVE) [400572/2013-3] French national research agency (ANR) [ANR-10-LABX-21-01/LABEX RESSOURCES 21] Portuguese national funding agency for science, research and technology [FCT-ANR/AAG-MAA/0065/2012] Region Lorraine
- Published
- 2017
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33. Silver(I) Binding Properties of Organic Soil Materials Are Different from Those of Isolated Humic Substances
- Author
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Ingmar Persson, Jon Petter Gustafsson, Dan Berggren Kleja, and Satomi Nakata
- Subjects
Silver ,Proton binding ,Speciation ,Inorganic chemistry ,010501 environmental sciences ,010402 general chemistry ,01 natural sciences ,complex mixtures ,Metal ,Ion-Binding ,Soil ,X-Ray-Absorption ,Environmental Chemistry ,Soil Pollutants ,Organic matter ,Benzopyrans ,Cation-Binding ,Solubility ,Humic Substances ,0105 earth and related environmental sciences ,chemistry.chemical_classification ,Matter ,Soil organic matter ,Water ,General Chemistry ,Bases Hsab ,Soil type ,Miljövetenskap ,0104 chemical sciences ,Coordination Chemistry ,chemistry ,visual_art ,Soil water ,Soft Acids ,visual_art.visual_art_medium ,Complexation ,Environmental Sciences - Abstract
The solubility of silver(I) in many soils is controlled by complexation reactions with organic matter. In this work we have compared the ability of isolated humic and fulvic acids to bind silver(I) with that of mor and peat materials. One new data set for Suwannee River Fulvic Acid was produced, which was consistent with published data sets for isolated fulvic and humic acids. The ability of soil materials to bind silver(I) was studied as a function of pH in the range 2.5-5.0, at a wide range of silver(I)-to-soil ratios (10(-4.2) - 10(-1.9) mol kg(-1)). By calibrating the Stockholm Humic Model on the humic and fulvic acids data sets, we showed that binding of silver(I) to both types of soil materials was much stronger (up to 2 orders of magnitude) than predicted from the silver(I) binding properties of the isolated humic materials. Thus, the approach taken for many other metals, that is, to model solubility in soils by using metal and proton binding parameters derived from isolated humic and fulvic acids, cannot be used for silver(I). One possible explanation for the discrepancy could be that silver(I) predominately interacted with various biomolecules in the soil samples, instead of humic- and fulvic-acid type materials. QC 20160913
- Published
- 2016
34. Silver(I) Binding Properties of Organic Soil Materials Are Different from Those of Isolated Humic Substances
- Author
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Kleja, Dan B., Nakata, Satomi, Persson, Ingmar, Gustafsson, Jon Petter, Kleja, Dan B., Nakata, Satomi, Persson, Ingmar, and Gustafsson, Jon Petter
- Abstract
The solubility of silver(I) in many soils is controlled by complexation reactions with organic matter. In this work we have compared the ability of isolated humic and fulvic acids to bind silver(I) with that of mor and peat materials. One new data set for Suwannee River Fulvic Acid was produced, which was consistent with published data sets for isolated fulvic and humic acids. The ability of soil materials to bind silver(I) was studied as a function of pH in the range 2.5-5.0, at a wide range of silver(I)-to-soil ratios (10(-4.2) - 10(-1.9) mol kg(-1)). By calibrating the Stockholm Humic Model on the humic and fulvic acids data sets, we showed that binding of silver(I) to both types of soil materials was much stronger (up to 2 orders of magnitude) than predicted from the silver(I) binding properties of the isolated humic materials. Thus, the approach taken for many other metals, that is, to model solubility in soils by using metal and proton binding parameters derived from isolated humic and fulvic acids, cannot be used for silver(I). One possible explanation for the discrepancy could be that silver(I) predominately interacted with various biomolecules in the soil samples, instead of humic- and fulvic-acid type materials., QC 20160913
- Published
- 2016
- Full Text
- View/download PDF
35. Humic substance charge determination by titration with a flexible cationic polyelectrolyte
- Author
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Luuk K. Koopal, Wenfeng Tan, Willem Norde, and University of Groningen
- Subjects
PROTON-BINDING ,FULVIC-ACID ,ADSORPTION ,Proton binding ,Laboratorium voor Fysische chemie en Kolloïdkunde ,Inorganic chemistry ,streaming current detector ,ION-BINDING ,colloid titration ,chemistry.chemical_compound ,Ion binding ,light-scattering ,Geochemistry and Petrology ,Humic acid ,PolyDADMAC ,NATURAL ORGANIC-MATTER ,Physical Chemistry and Colloid Science ,natural organic-matter ,STREAMING CURRENT DETECTOR ,VLAG ,chemistry.chemical_classification ,Charge density ,mineral particles ,Polyelectrolyte ,LIGHT-SCATTERING ,COLLOID TITRATION ,Isoelectric point ,chemistry ,ion-binding ,nica-donnan model ,adsorption ,NICA-DONNAN MODEL ,Titration ,fulvic-acid ,proton-binding ,MINERAL PARTICLES - Abstract
The anionic charge of humic substances (HS) plays a major role in the interaction of HS with other components. Therefore, the potential of the polyelectrolyte titration technique to obtain the charge density of HS in simple 1–1 electrolyte solutions has been investigated. Titrations are carried out with an automatic titrator combined with the “Mutek particle charge detector” which allows determination of the Mutek potential and the pH as a function of the added amount of titrant which is a solution of poly-diallyldimethylammonium chloride (polyDADMAC), a cationic strong polyelectrolyte. When the Mutek potential reverses its sign the iso-electric point (IEP) of the polyDADMAC–HS complex is reached. The polyDADMAC/HS mass ratio at the IEP gives information on the HS charge density and from the pH changes in solution an estimate of the charge regulation in the HS–polyDADMAC complex can be obtained. In general, for polyDADMAC–HS complexes an increase in the dissociation of the acid groups of HS is found (charge regulation). The charge regulation decreases with increasing concentration of 1–1 background electrolyte. Cation incorporation can be neglected at 1–1 electrolyte concentrations ⩽ 1 mmol L−1 and a 1–1 stoichiometry exists between the polyDADMAC and HS charge. However, at these low salt concentrations the charge regulation is substantial. A detailed analysis of purified Aldrich humic acid (PAHA) at pH 5 and a range of KCl concentrations reveals that the anionic charge of PAHA in the complex increases at 5 mmol L−1 KCl by 30% and at 150 mmol L−1 KCl by 12%. On the other hand, increasing amounts of K+ become incorporated in the complex: at 5 mmol L−1 KCl 5% and at 150 mmol L−1 KCl 24% of the PAHA charge is balanced by K+. By comparing at pH 5 the mass ratios polyDADMAC/PAHA in the complex at the IEP with the theoretical mass ratios of polyDADMAC/PAHA required to neutralize PAHA in the absence of charge regulation and K+ incorporation, it is found that at 50 mmol L−1 KCl the extra negative charge due to the interaction between polyDADMAC and PAHA is just compensated by K+ incorporation in the complex. Therefore, a pseudo 1–1 stoichiometry exists at about 50 mmol L−1 1–1 electrolyte concentration and only at this salt concentration polyDADMAC titrations and conventional proton titrations give identical results. Most likely this is also true for other HA samples and other pH values. For FA further study is required to reveal the conditions for which polyDADMAC and proton titrations give identical results.
- Published
- 2011
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36. Comparison of Various Models to Describe the Charge−pH Dependence of Poly(acrylic acid)
- Author
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Frans A. M. Leermakers, Jan van Male, Johannes Lützenkirchen, and Staffan Sjöberg
- Subjects
monte-carlo ,titration ,Laboratorium voor Fysische chemie en Kolloïdkunde ,General Chemical Engineering ,polyelectrolytes ,chemistry.chemical_compound ,Deprotonation ,Ion binding ,Polymer chemistry ,Molecule ,molecules ,Physical Chemistry and Colloid Science ,sodium ,Acrylic acid ,Aqueous solution ,General Chemistry ,biochemical phenomena, metabolism, and nutrition ,constants ,Polyelectrolyte ,ion-binding ,chemistry ,Chemical engineering ,adsorption ,Ionic strength ,electrolyte-solutions ,Titration ,simulations - Abstract
The charge of poly(acrylic acid) (PAA) in dilute aqueous solutions depends on pH and ionic strength. We report new experimental data and test various models to describe the deprotonation of PAA in three different NaCl concentrations. A simple surface complexation approach is found to be very successful: the constant capacitance model requires one pKa value and one capacitance for excellent fits to the data, with both parameters depending on ionic strength. The use of a self-consistent set of diffuse double layer parameters with one pKa for flat, spherical, and cylindrical geometry does not result in a satisfactory description of the data, and a number of adjustments to that model were tested to improve the fit. The basic Stern model (BSM) was tested with both plate and cylinder geometry. The cylinder geometry along with strong electrolyte binding was found to be superior to a similar approach involving weak electrolyte binding both in terms of goodness of fit and self-consistency of the parameters. The third approach, the non-ideal competitive consistent adsorption-Donnan (NICCA-Donnan) model, involving one functional group, allows an excellent description of the experimental data. Finally, the polyacid chain was modeled using a mechanistically more realistic self-consistent field (SCF) approach, which allows for radially inhomogeneous distributions of the charges and radial variations in the polymer density and electrostatic potential, while the functional groups can be in protonated, deprotonated, or complexed states. One functional group was insufficient for a satisfactory description of the data. With two segments (one monoprotic, the other diprotic) a reasonable description of the data, including the ionic strength dependence, is achieved, and the tendency of the size of the macro-ion with pH and ionic strength is as expected. This model has the fewest adjustable parameters and is considered the most realistic and comprehensive among the models tested
- Published
- 2011
- Full Text
- View/download PDF
37. Geochemical Modeling of Zinc Bioavailability for Rice
- Author
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Sjoerd E. A. T. M. van der Zee, Chunqin Zou, Ellis Hoffland, Fusuo Zhang, Thomas J. Schröder, and Xiaopeng Gao
- Subjects
Bulk soil ,contaminated soils ,Soil Science ,chemistry.chemical_element ,Sub-department of Soil Quality ,Zinc ,mineral dissolution ,Ion binding ,heavy-metals ,Organic matter ,organic-matter ,Bodembiologie ,chemistry.chemical_classification ,aerobic rice ,Rhizosphere ,oryza-sativa l ,food and beverages ,Soil Biology ,PE&RC ,Sectie Bodemkwaliteit ,lowland rice ,Bioavailability ,ion-binding ,chemistry ,Agronomy ,redox ,Environmental chemistry ,Soil water ,Anaerobic exercise ,ph changes - Abstract
The transition from anaerobic to aerobic rice (Oryza sativa L.) cultivation has been reported to decrease Zn bioavailability. To determine and understand the differences in plant Zn uptake between anaerobic and aerobic rice cultivation systems, a field plot experiment was conducted with direct-seeded rice grown on a low-Zn soil under both anaerobic and aerobic conditions. Results showed that the mass fraction of Zn in shoots and Zn uptake of plants in the aerobic field was significantly lower than in the anaerobic field. Visual Zn deficiency symptoms as whitish-brown necrotic patches on leaves were more severe on plants grown in aerobic soils than plants in anaerobic soils, indicating reduced Zn bioavailability. To determine whether the underlying causes could be of a geochemical nature, a controlled soil incubation experiment was done. Using a fully parameterized model, we found that the difference in plant Zn uptake between the two cultivation systems was small compared with that predicted by geochemical modeling, assuming Zn uptake is controlled by the soluble fraction in the soil. Whereas individual effects of soil factors (e.g., pH) were demonstrated to cause large variations in Zn concentration, only about a 15% difference in plant Zn uptake was observed. This large discrepancy reveals that the consideration of separate soil chemical processes, instead of their integrated assessment, may be inappropriate. We speculated that the discrepancy could also be associated with the chemical conditions in the rhizosphere, where the local acidity, dissolved organic C, and redox conditions may deviate significantly from the bulk soil on which the geochemical analysis was based
- Published
- 2010
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38. Evaluation of a Generic Multisurface Sorption Model for Inorganic Soil Contaminants
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Rob N.J. Comans, Johannes C. L. Meeussen, and Joris J. Dijkstra
- Subjects
Bodemscheikunde en Chemische Bodemkwaliteit ,Surface Properties ,Analytical chemistry ,chemistry.chemical_element ,Mineralogy ,ferrihydrite ,Ferrihydrite ,Chromium ,iron ,Adsorption ,Ion binding ,Soil Pollutants ,heavy-metals ,sandy soil ,Environmental Chemistry ,Organic matter ,organic-matter ,chemistry.chemical_classification ,WIMEK ,Chemistry ,incinerator bottom ash ,Soil classification ,Sorption ,General Chemistry ,Hydrogen-Ion Concentration ,surface complexation ,Models, Chemical ,ion-binding ,speciation ,Inorganic Chemicals ,Leaching (metallurgy) ,Soil Chemistry and Chemical Soil Quality - Abstract
The performance of a multisurface sorption model approach, composed of well-accepted surface complexation models in combination with published "generic" parameter sets, is evaluated for its possible use in risk assessment. For that purpose, the leaching of a broad range of potential soil contaminants (Ni, Cu, Zn, Cd, Pb, Ba, Cr, Co, Mo, V, Sn, Sb, S, As, Se) from eight diffusely and industrially contaminated soils is predicted simultaneously without any parameter optimization. The model approach includes aqueous speciation in combination with sorption to organic matter (NICA-Donnan model), Fe/Al(hydr)oxides (Generalized Two-Layer Model), and clay (Donnan model). Independent data generated by pH-static leaching experiments, performed with individual subsamples over a wide pH range (pH 0.4-12), provide a sensitive evaluation of the model performance. Root-mean-squared error values between predicted and measured log concentrations over the entire pH range, RMSE(log), are < 0.5 for Cu, Ni, Cd, Co, S, and Se, and RMSE(log) < 1 for Zn, Ba, Cr, Pb, Sn, Mo, Sn and As. The approach without parameter optimization has led to recommendations for further research with particular emphasis on identification of leaching mechanisms for Pb, Mo, Sb, and V and further expansion of the data sets to reduce the uncertainty of the available generic sorption parameters for Sn, Sb, Ba, Cr, and V.
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- 2009
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39. Interaction between Humic Acid and Lysozyme, Studied by Dynamic Light Scattering and Isothermal Titration Calorimetry
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Luuk K. Koopal, Wenfeng Tan, and Willem Norde
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ADSORPTION ,Light ,Paha ,Laboratorium voor Fysische chemie en Kolloïdkunde ,Inorganic chemistry ,PROTEIN ,ION-BINDING ,SUBSTANCES ,Calorimetry ,surfaces ,PARAMETERS ,soil ,substances ,Hydrophobic effect ,LSZ reduction formula ,Ion binding ,Dynamic light scattering ,Scattering, Radiation ,Environmental Chemistry ,NATURAL ORGANIC-MATTER ,natural organic-matter ,Physical Chemistry and Colloid Science ,Humic Substances ,VLAG ,parameters ,chemistry.chemical_classification ,Chemistry ,SURFACES ,Osmolar Concentration ,Isothermal titration calorimetry ,General Chemistry ,SOIL ,Isoelectric point ,ion-binding ,nica-donnan model ,adsorption ,NICA-DONNAN MODEL ,Muramidase ,Counterion ,protein - Abstract
Interactions of purified Aldrich humic acid (PAHA) with the protein lysozyme (LSZ) are studied with dynamic light scattering and isothermal titration calorimetry by mixing LSZ and PAHA at various mass ratios. In solution LSZ is positive and PAHA is negative at the investigated pH values. Up to moderate KCl concentrations no aggregation occurs for LSZ and for PAHA aggregated particles with an average radius of 80 nm are present Complexation of PAHA with LSZ starts as soon as PAHA is added to LSZ and is followed by aggregation when the isoelectric-point (IEP) of the complexes is approached. Aggregation is gradual for 50 mM KCl and sudden for low KCl concentrations. The aggregate size is at its maximum at the IEP of the complexes. At mass ratios beyond the IEP the aggregates partially disaggregate. Positively charged complexes of PAHA and LSZ, formed in the absence of salt, strongly aggregate upon salt addition. Mixing of LSZ and PAHA is initially enthalpically driven. Near the IEP complexation and aggregation are due to hydrophobic forces (structural reorganization) and counterion release. The observations are relevant for other HA-protein systems when the protein is positively charged.
- Published
- 2009
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- View/download PDF
40. Effects of rice straw on the speciation of cadmium (Cd) and copper (Cu) in soils
- Author
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Liping Weng, Yanshan Cui, Xin Du, and Yong-Guan Zhu
- Subjects
aqueous-solution ,cellulose degradation-products ,dissolved organic-matter ,Bodemscheikunde en Chemische Bodemkwaliteit ,model parameters ,Metal ions in aqueous solution ,Soil Science ,Mineralogy ,chemistry.chemical_element ,Ion binding ,trace-metals ,Soil pH ,heavy-metals ,donnan membrane technique ,Organic matter ,Incubation ,chemistry.chemical_classification ,Cadmium ,WIMEK ,Aqueous solution ,humic substances ,food and beverages ,capillary-electrophoresis ,ion-binding ,chemistry ,Soil water ,Soil Chemistry and Chemical Soil Quality ,Nuclear chemistry - Abstract
Four soils were collected from different sites of China in Lechang (LC, Guangdong province), Changsha (CS, Hunan province), Jiaxing UX, Zhejiang province) and Hangzhou (HZ, Zhejiang province), and were spiked with Cu (50 mg kg(-1)) and Cd (5 mg kg(-1)). The effects of rice straw addition (6%) on the chemical distribution of both metal ions were studied by measuring the soluble metal ion concentrations and the free metal ion concentrations (using the Donnan membrane technique) after 1-, 3- and 6-month incubation. Results show that the addition of rice straw increased soil pH by about 0.4 pH unit on average, and increased DOC significantly in soil LC, CS and JX, but not in soil HZ. With the addition of rice straw, total soluble Cu concentration increased from 0.82 mu mol l(-1) (0.26-2.4 mu mol l(-1)) to 1.22 mu mol l(-1) (0.70-3.60 mu mol l(-1)), whereas total soluble Cd concentration decreased from 20 nmol l(-1) (2-70 nmol l(-1)) to 15 nmol l(-1) (2-56 nmol l(-1)). When rice straw was added, both free Cu 2 and Cd 21 concentrations decreased, for free Cu2+ concentration from 217 nmol l(-1) (31 to 369 nmol l(-1)) to 124 nmol l(-1) (22 to 263 nmol l(-1)) and for free Cd2+ concentration from 16 nmol l(-1) (1-55 nmol l(-1)) to 12 nmol l(-1) (1-43 nmol l(-1)). With the increase of incubation time, free Cu2+ concentration tended to increase but free Cd2+ concentration decreased. Speciation model calculations show that compared to the binding capacity of soil organic matter, the capacity of rice straw is much less important. The decrease of free metal ion concentration upon rice straw addition can be attributed mainly to the increased pH. The higher DOC content in the rice straw treatment could be the reason for higher soluble Cu concentration when rice straw was added. Adsorption to DOC is much less important for Cd than for Cu. Calculation also shows that adsorption to clay minerals plays a more important role for Cd than for Cu, which may explain the stronger ageing effects on Cd distribution. (c) 2008 Elsevier B.V. All rights reserved.
- Published
- 2008
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41. Modeling of metal binding in tropical Fluvisols and Acrisols treated with biosolids and wastewater
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Nguyen Manh Khai, Ingrid Öborn, Jon Petter Gustafsson, and S. Hillier
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Environmental Engineering ,Biosolids ,cadmium ,complexation ,Health, Toxicology and Mutagenesis ,Amendment ,donnan ,Soil ,Metals, Heavy ,Water Movements ,heavy-metals ,sandy soil ,Soil Pollutants ,Environmental Chemistry ,Trace metal ,Organic matter ,natural organic-matter ,chemistry.chemical_classification ,sorption ,Acrisol ,humic substances ,Chemistry ,solubility ,zinc ,Public Health, Environmental and Occupational Health ,Geokemi ,General Medicine ,General Chemistry ,heavy metal ,Hydrogen-Ion Concentration ,Models, Theoretical ,trace metal ,Pollution ,Zinc ,Geochemistry ,ion-binding ,Wastewater ,adsorption ,copper ,Fluvisol ,Environmental chemistry ,Soil water ,manganese ,Adsorption ,Copper ,Cadmium ,Environmental Monitoring - Abstract
There is growing concern about the accumulation of metals in tropical agricultural soils. In this study, experimental results from batch studies were used to test whether multi-surface geochemical models could describe metal binding in selected Vietnamese soils. The multi-surface models considered metal binding to iron hydroxides (using the diffuse layer model), organic matter (Stockholm Humic model and NICA-Donnan model), and phyllosilicate clay (Gaines-Thomas equation) as well as complexation to dissolved organic and inorganic ligands in the solution phase. We found that for total dissolved Cd, Cu and Zn the two multi-surface models being tested provided very good model fits for all soils, as evidenced by low root-mean square errors between model predictions and observations. These results suggest that organic matter is an important sorbent for many metals in these soils. However, poor fits were obtained for Cr(III), Mn and Pb for all soils. The study also suggests that the pH is the main factor that controls the solubility of metals in tropical Fluvisols and Acrisols subjected to application of biosolids and wastewater, and that advanced multi-surface models can be used to simulate the binding and release of many trace metals. QC 20100525
- Published
- 2008
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42. Adsorption of Heterogeneously Charged Nanoparticles on a Variably Charged Surface by the Extended Surface Complexation Approach: Charge Regulation, Chemical Heterogeneity, and Surface Complexation
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Shinya Nagasaki, Luuk K. Koopal, Takumi Saito, and Satoru Tanaka
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Surface Properties ,Laboratorium voor Fysische chemie en Kolloïdkunde ,Electrolytes ,Adsorption ,Ion binding ,Computational chemistry ,Materials Chemistry ,Surface charge ,Particle Size ,Physical and Theoretical Chemistry ,Physical Chemistry and Colloid Science ,natural organic-matter ,double-layer interaction ,spherical colloidal particles ,humic substances ,Chemistry ,Hydrogen-Ion Concentration ,poisson-boltzmann theory ,Electrostatics ,protein adsorption ,Polyelectrolyte ,Surfaces, Coatings and Films ,Solutions ,electrical double-layer ,polyelectrolyte adsorption ,Condensed Matter::Soft Condensed Matter ,Energy Transfer ,Models, Chemical ,ion-binding ,Polyelectrolyte adsorption ,Chemical physics ,Nanoparticles ,Particle ,Salts ,electrostatic free-energy ,Algorithms ,Protein adsorption - Abstract
Adsorption of randomly branched polyelectrolytes, "hairy" particles and internally structured macromolecules, collectively denoted as heterogeneously charged nanoparticles, on charged surfaces is important in many technological and natural processes. In this paper, we will focus on (1) the charge regulation of both the nanoparticle and the surface and (2) the surface complexation between the particle functional groups and the surface sites and will theoretically study the adsorption using the extended surface complexation approach. The model explicitly considers the electrochemical potential of a nanoparticle with an average (smeared-out) structure and charge both in bulk solution and on the surface to obtain the equilibrium adsorption. The chemical heterogeneity of the particle is described by a distribution of the protonation constant. Detailed analysis of the chemical potential of the adsorbed nanoparticle reveals that the pH and salt dependence of the adsorption can be largely explained by the balance between an energy gain resulting from the particle and surface charge regulation and the surface complexation and an energy loss from the unfavorable interparticle electrostatic repulsion close to the surface. This conclusion is also supported by the strong impacts that the chemical heterogeneity of the particle functional groups, the magnitude of the surface complexation, the number of the functional groups, and the size of the particle have on the adsorption.
- Published
- 2008
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43. Use of speciation and complexation models to estimate heavy metal sorption in soils
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L.T.C. Bonten, Willem H. van Riemsdijk, Jan E. Groenenberg, and Liping Weng
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Bodemscheikunde en Chemische Bodemkwaliteit ,Soil Science ,Mineralogy ,contaminated soils ,coatings ,Metal ,Adsorption ,Ion binding ,Dissolved organic carbon ,Alterra - Centrum Bodem ,Wageningen Environmental Research ,natural organic-matter ,WIMEK ,Chemistry ,humic substances ,Extraction (chemistry) ,Soil Science Centre ,Sorption ,cd ,ion-binding ,adsorption ,visual_art ,Environmental chemistry ,Soil water ,oxides ,visual_art.visual_art_medium ,heterogeneity ,Clay minerals ,Soil Chemistry and Chemical Soil Quality ,pb - Abstract
The development of speciation and surface complexation models to calculate partitioning of metals between the soil solid phase and soil solution has made a large progress. We evaluated the use and practical applicability of an assemblage of complexation models to predict sorption of Cd, Cu, Ni, Pb and Zn. We used 353 samples which cover a wide range of soil properties and metal contents. For sorption of cations to solid and dissolved organic matter the NICA-Donnan model was used, to clay minerals a non-specific Donnan type exchange model, and to metal(hydr)oxides a two-site DDL model. Calculated solution concentrations agree well with measurements, except for Pb where calculations overestimate concentrations by one order of magnitude on average. Some highly Zn contaminated samples show relatively large deviations between measured and calculated concentrations. This is most likely caused by Zn containing minerals which are included in the total amount of reactive metals in the soil as determined by acid extraction. Hence, such models can be used for practical applications if one is aware of the possible complications. When the “total reactive metal content” includes a substantial amount of precipitated metals, which may occur for heavily contaminated soils, the model tends to overestimate concentrations in solution.
- Published
- 2008
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44. The coupled mobilizations and transport of dissolved organic matter and metals (Cu and Zn) in soil columns
- Subjects
parameters ,mechanisms ,WIMEK ,Bodemscheikunde en Chemische Bodemkwaliteit ,ion-binding ,nica-donnan model ,adsorption ,humic substances ,carbon ,transport ,heavy-metals ,Soil Chemistry and Chemical Soil Quality ,forest floor - Abstract
Dissolved organic carbon (DOC) is a key component involved in metal displacement in soils. In this study, we investigated the concentration profiles of soil-borne DOC, Cu and Zn at various irrigation rates with synthetic rain water under quasi steady-state conditions, using repacked soil columns with a metal-polluted topsoil and two unpolluted subsoils. Soil solution was collected using suction cups installed at centimeter intervals over depth. In the topsoil the concentrations of DOC, dissolved metals (Zn and Cu), major cations (Ca2+ and Mg2+) and anions ( and ) increased with depth. In the subsoil, the Cu and Zn concentrations dropped to background levels within 2 cm. All compounds were much faster mobilized in the first 4 cm than in the rest of the topsoil. DOC and Cu concentrations were higher at higher flow rates for a given depth, whereas the concentrations of the other ions decreased with increasing flow rate. The decomposition of soil organic matter resulted in the formation of DOC, , and and was the main driver of the system. Regression analysis indicated that Cu mobilization was governed by DOC, whereas Zn mobilization was primarily determined by Ca and to a lesser extent by DOC. Labile Zn and Cu2+ concentrations were well predicted by the NICA-Donnan model. The results highlight the value of high-resolution in-situ measurements of DOC and metal mobilization in soil profiles.
- Published
- 2007
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45. Exploring Cd, Cu, Pb, and Zn dynamic speciation in mining and smelting-contaminated soils with stable isotopic exchange kinetics
- Author
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Isabella Zelano, Mickaël Tharaud, Laure Cordier, Zong-ling Ren, Marc F. Benedetti, Yann Sivry, Jun Dai, South China Agricultural University (SCAU), Institut de Physique du Globe de Paris (IPGP), Institut national des sciences de l'Univers (INSU - CNRS)-IPG PARIS-Université de La Réunion (UR)-Centre National de la Recherche Scientifique (CNRS)-Université de Paris (UP), Institut national des sciences de l'Univers (INSU - CNRS)-IPG PARIS-Université Paris Diderot - Paris 7 (UPD7)-Université de La Réunion (UR)-Centre National de la Recherche Scientifique (CNRS), and South China Agr Univ, Coll Resources & Environm, Guangzhou 510642, Guangdong, Peoples R China
- Subjects
DILUTION TECHNIQUES ,KeyWords Plus:HUMIC SUBSTANCES ,media_common.quotation_subject ,Metal ions in aqueous solution ,Kinetics ,[SDU.STU]Sciences of the Universe [physics]/Earth Sciences ,ION-BINDING ,010501 environmental sciences ,01 natural sciences ,Metal ,ZINC ,Geochemistry and Petrology ,Desorption ,Environmental Chemistry ,ICP-MS ,0105 earth and related environmental sciences ,media_common ,CADMIUM AVAILABILITY ,Chemistry ,Soil organic matter ,Sorption ,04 agricultural and veterinary sciences ,15. Life on land ,Pollution ,Speciation ,ORGANIC-MATTER ,METAL-IONS ,[SDU]Sciences of the Universe [physics] ,Environmental chemistry ,visual_art ,Soil water ,CHEMICAL-EXTRACTION ,040103 agronomy & agriculture ,visual_art.visual_art_medium ,0401 agriculture, forestry, and fisheries ,LABILE CU - Abstract
International audience; The exchange kinetics of Cd, Cu, Pb, and Zn in seven mining and smelting-contaminated soils and the other two anthropogenically contaminated soils was investigated by using multi-elementary stable isotopic exchange kinetic (SIEK) method, and the experimental results were successfully interpreted by modelling using a sum of pseudo first order kinetics equations. SIEK results show that in the studied soils the isotopic exchange of Cd is a relatively fast process, and the exchange almost reaches an apparent plateau after 3-d equilibration; whereas for Cu, Pb, and Zn, the exchange is more sluggish, suggesting that it is important to understand the time-dependent metal mobility for risk assessment and management of contaminated soils. In most of the soils, the total isotopically exchangeable pool is divided, for all the metals, into two distinct pools: a fast exchangeable pool (E-1) with a kinetic rate constant k(1) having values around 1 min(-1) and a much slower exchangeable pool (E-2) with k(2) ranging from 0.0001 min(-1) to 0.001 min(-1). The distribution of the two exchangeable pools varies significantly among metals. The amount of isotopically exchangeable Cd related to the fast pool is dominant, accounting for on average 60% of total isotopically exchangeable pool in the soils; whereas this pool is smaller for Cu, Zn, and Pb. The sequence of average k(1) values is Cd > Pb approximate to Zn > Cu, consistent with the reported sequence of stability constants of metal-humic substances (HS) complexes while the average k(2) values follow the order: Cd > Pb > Cu > Zn, probably controlled by the slow desorption of metal ions associated with soil organic matter (SOM) fraction. Our results imply that further study on the exchange kinetics of metals on each individual sorption surface in soils, especially SOM, is critical to help understanding the overall exchange kinetics of heavy metals in whole soils
- Published
- 2015
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46. Adsorption of humic substances on goethite: Comparison between humic acids and fulvic acids
- Author
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Luuk K. Koopal, Willem H. van Riemsdijk, Tjisse Hiemstra, and Liping Weng
- Subjects
Goethite ,Bodemscheikunde en Chemische Bodemkwaliteit ,Proton ,Laboratorium voor Fysische chemie en Kolloïdkunde ,clay-minerals ,Inorganic chemistry ,Fractionation ,surfaces ,Adsorption ,Ion binding ,aluminum-oxide ,Environmental Chemistry ,Benzopyrans ,fractionation ,Physical Chemistry and Colloid Science ,natural organic-matter ,Humic Substances ,Minerals ,WIMEK ,Chemistry ,General Chemistry ,Hydrogen-Ion Concentration ,stoichiometry ,water interface ,Models, Chemical ,ion-binding ,nica-donnan model ,Ionic strength ,visual_art ,visual_art.visual_art_medium ,isotherms ,Protons ,Clay minerals ,Stoichiometry ,Iron Compounds ,Soil Chemistry and Chemical Soil Quality - Abstract
The adsorption of humic acids (HA) to goethite (at pH 3-11) and the proton co-adsorption (at pH 4.0, 5.5, and 7.0) were measured, and the results were compared to those of fulvic acids (FA). Compared to FA, the adsorption of HA is stronger and more ionic strength dependent. The adsorption of both HA and FA decreases with increasing pH. The relative change of the adsorption with pH is bigger for HA than for FA at relatively low pH. At relatively high pH, it is the opposite. Protons are released at pH 4.0 and co-adsorbed at pH 5.5 and 7.0 upon the adsorption of both HA and FA. The observed pH dependency of HA and FA adsorption is in agreement with the proton co-adsorption data. Model calculations show that the adsorbed FA particles are on average located in the Stern layer, whereas the adsorbed HA particles protrude beyond the Stern layer. The closer location to the surface of the adsorbed FA leads to stronger electrostatic interactions between the FA particles and the surface, which explains the larger amount of protons released at low pH and co-adsorbed at high pH with each mass unit of FA adsorbed than that with HA adsorbed. The model also reveals that for FA a mean-field (smeared-out) approximation is reasonable, but for HA a patchwise approach is more appropriate at relatively low loading.
- Published
- 2006
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47. Leaching of Heavy Metals from Contaminated Soils: An Experimental and Modeling Study
- Author
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Joris J. Dijkstra, Rob N.J. Comans, and Johannes C. L. Meeussen
- Subjects
dissolved organic-matter ,Bodemscheikunde en Chemische Bodemkwaliteit ,Incinerator bottom ash ,chemistry.chemical_element ,Ion binding ,Metals, Heavy ,Dissolved organic carbon ,Soil Pollutants ,sandy soil ,Environmental Chemistry ,waste ,Organic matter ,chemistry.chemical_classification ,Cadmium ,WIMEK ,sorption ,humic substances ,Chemistry ,Environmental engineering ,Water ,incinerator bottom ash ,solubility control ,Lessivage ,General Chemistry ,Hydrogen-Ion Concentration ,Models, Theoretical ,Soil contamination ,Solubility ,ion-binding ,nica-donnan model ,speciation ,Environmental chemistry ,Leaching (pedology) ,Soil Chemistry and Chemical Soil Quality - Abstract
In this paper, we characterize the leaching of heavy metals (Ni, Cu, Zn, Cd, and Pb) from eight contaminated soils over a wide range of pH (pH 0.4-12) using an original approach based on batch pH-static leaching experiments in combination with selective chemical extractions and geochemical modeling. The leached concentrations of the heavy metals are generally much lower than the total concentrations and show a strong pH dependency, resulting in "V-shaped" leaching curves with orders of magnitude changes in solution concentrations. The "multisurface" model used incorporates adsorption to dissolved and solid organic matter (NICA-Donnan), iron/aluminum (hydr)oxide (generalized two-layer model) and clay (Donnan model). These models were applied without modifications, and only the standard set of binding constants and parameters was used (i.e., without any fitting). The model predictions of heavy metal leaching are generally adequate and sometimes excellent. Results from speciation calculations are consistent with the well-recognized importance of organic matter as the dominant reactive solid phase in soils. The observed differences between soils with respect to element speciation in the solid phase correspond to the relative amounts of the reactive surfaces present in the soils. In the solution phase, complexes with dissolved organic matter (DOM) are predominant over most of the pH range. Free metal ions (Me2+) are generally the dominant species below pH 4. The combination of the experimental and modeling approach as used in this study is shown to be promising because it leads to a more fundamental understanding of the pH-dependent leaching processes in soils. The "multisurface" modeling approach, with the selected sorption models, is shown to be able to adequately predict the leaching of heavy metals from contaminated soils over a wide range of conditions, without any fitting of parameters.
- Published
- 2004
- Full Text
- View/download PDF
48. Understanding the effects of Soil Characteristics on Phytotoxicity and bioavailability of nickel using speciation Models
- Author
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L.P. Weng, Anke Wolthoorn, Willem H. van Riemsdijk, Theo M. Lexmond, and Erwin J. M. Temminghoff
- Subjects
Bodemscheikunde en Chemische Bodemkwaliteit ,Soil test ,Avena ,cadmium ,availability ,Biological Availability ,Sub-department of Soil Quality ,complex mixtures ,Soil ,Nickel ,Soil pH ,Environmental Chemistry ,Soil Pollutants ,heavy-metals ,Biomass ,organic-matter ,parameters ,WIMEK ,Chemistry ,humic substances ,Soil organic matter ,Environmental engineering ,Soil chemistry ,General Chemistry ,Hydrogen-Ion Concentration ,Models, Theoretical ,Soil type ,Silicon Dioxide ,Sectie Bodemkwaliteit ,Bioavailability ,ion-binding ,adsorption ,Environmental chemistry ,copper ,Soil water ,oxides ,Clay ,Phytotoxicity ,Aluminum Silicates ,Soil Chemistry and Chemical Soil Quality ,Environmental Monitoring - Abstract
Acidity (pH) has been realized to be the most important soil characteristic that modulates bioavailability of heavy metals by affecting both the chemical speciation of metals in soil and the metal binding to the active sites on biota. In this work, we show that besides soil pH, metal bioavailability also depends to a certain extent on the type of soil. A better understanding of the role of soil type in regulating metal availability can be achieved with the analysis of soil composition and with calculations using chemical speciation models. Results of pot experiments, in which three different soils were spiked with nickel, show that the EC50 of total nickel in decreasing the biomass production of oats varies widely (0.7-22.5 mmol kg(-1) soil, more than 30 times). pH (4.7-7.0) is the most important factor, explaining up to a factor of 14 difference of nickel bioavailability in the soils. The remaining variation is caused by other differences in soil composition (soil type). The bioavailability and toxicity of nickel in the organic matter-rich soil studied is less than half of that in the sandy and clay soil studied at a similar pH. The chemical calculations using a multi-surface speciation model show that soil organic matter binds Ni much stronger than clay silicates and iron (hydr)oxides within the acidic pH range, which supports the experimental findings. In all three soils, the EC50 of Ni expressed in terms of Ni in 0.01 M CaCl2 soil extraction is rather stable (24-58 microM), suggesting the possibility to use this extraction as an estimation of metal availability in soil.
- Published
- 2004
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49. Dynamic speciation analysis of heterogeneous metal complexes with natural ligands by stripping chronopotentiometry at scanned deposition potential (SSCP)
- Author
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Raewyn M. Town and Herman P. van Leeuwen
- Subjects
Stripping (chemistry) ,Laboratorium voor Fysische chemie en Kolloïdkunde ,Kinetics ,Inorganic chemistry ,Electrochemistry ,Metal ,Ion binding ,trace-element speciation ,limiting current ,different diffusion-coefficients ,Freundlich equation ,fundamental features ,Voltammetry ,Physical Chemistry and Colloid Science ,voltammetry ,WIMEK ,Lability ,Chemistry ,General Chemistry ,electrode ,humic acids ,ion-binding ,visual_art ,visual_art.visual_art_medium ,systems ,association dissociation kinetics - Abstract
Stripping chronopotentiometry at scanned deposition potential (SSCP) allows chemical heterogeneity in metal speciation to be unambiguously identified. In the labile regime, use of the Freundlich binding isotherm allows straightforward determination of parameters to describe the apparent stability and heterogeneity of metal complexes with humic substances. The extent of heterogeneity of metal binding by several humic substances follows the order Cu(ii) >> Pb(ii) > Cd(ii). The lability of metal complexes decreases from the foot to the top of the wave, and the greater the degree of heterogeneity, the more readily lability is lost. In the kinetic current regime, the Koutecký–Koryta approximation allows an expression to be obtained for the SSCP wave that provides a good estimate of the experimental data for metal complexes with moderate degrees of heterogeneity.
- Published
- 2004
- Full Text
- View/download PDF
50. Viscosity properties of sodium carboxymethylcellulose solutions
- Author
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Yang, Xiao Hong and Zhu, Wei Ling
- Published
- 2007
- Full Text
- View/download PDF
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