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Environmentally driven changes in small pelagic fish condition and size have been observed in the Gulf of Lions (GOL) since 2008, leading to a significant fishery crisis. However, the effect of changes in environment and/or in the small pelagic community on the demersal community remain unknown. For the first time, this study examines the body condition (bc) and population density of 22 demersal species since 1994, using dynamic factor analysis (DFA). Most (but not all) of demersal species have shown a common shift between 2006 and 2009, which is synchronous with that observed in small pelagic species and the environmental conditions in the GOL. It had been concluded that the environmentally driven changes detected in the pelagic fish community also affected the demersal fish community, but with less drastic and lasting consequences. As the DFA revealed that the bc displayed important variations for several species, notably hake (Merlucius merluccius), the interaction between the bc and population density was investigated using the Multivariate Autoregressive (MAR) model on hake population at three life stages (recruits, juveniles, and adults). Results showed that adult bc, while negatively affected by density, had a positive effect on recruitment. So hake bc could have affected population dynamics by promoting higher recruitment at low densities. Further work is needed to ascertain whether such effects exist in other demersal species.

The Mediterranean Sea is characterized by large scale gradients of temperature, productivity and salinity, in addition to pronounced mesoscale differences. Such a heterogeneous system is expected to shape the population dynamics of marine species. On the other hand, prevailing environmental and climatic conditions at whole basin scale may force spatially distant populations to fluctuate in synchrony. Cephalopods are excellent case studies to test these hypotheses owing to their high sensitivity to environmental conditions. Data of two cephalopod species with contrasting life histories (benthic octopus vs nectobenthic squid), obtained from scientific surveys carried out throughout the Mediterranean during the last 20 years were analyzed. The objectives of this study and the methods used to achieve them (in parentheses) were: (i) to investigate synchronies in spatially separated populations (decorrelation analysis); (ii) detect underlying common abundance trends over distant regions (dynamic factor analysis, DFA); and (iii) analyse putative influences of key environmental drivers such as productivity and sea surface temperature on the population dynamics at regional scale (general linear models, GLM). In accordance with their contrasting spatial mobility, the distance from where synchrony could no longer be detected (decorrelation scale) was higher in squid than in octopus (349 vs 217 km); for comparison, the maximum distance between locations was 2620 km. The DFA revealed a general increasing trend in the abundance of both species in most areas, which agrees with the already reported worldwide proliferation of cephalopods. DFA results also showed that population dynamics are more similar in the eastern than in the western Mediterranean basin. According to the GLM models, cephalopod populations were negatively affected by productivity, which would be explained by an increase of competition and predation by fishes. While warmer years coincided with declining octopus numbers, areas of high sea surface temperature showed higher densities of squid. Our results are relevant for regional fisheries management and demonstrate that the regionalisation objectives envisaged under the new Common Fishery Policy may not be adequate for Mediterranean cephalopod stocks., SI

Special issue Ecopath 30 years – Modelling ecosystem dynamics: beyond boundaries with EwE.-- 15 pages, 8 figures, 3 tables, 2 appendixes, supplementary data https://dx.doi.org/10.1016/j.ecolmodel.2016.03.020, To realistically predict spatial-temporal dynamics of species in marine ecosystems it is essential to consider environmental conditions in conjunction with human activities and food web dynamics. In this study, we used Ecospace, the spatial-temporal dynamic module of Ecopath with Ecosim (EwE) food web model, to drive a spatially explicit marine food web model representing the Southern Catalan Sea (NW Mediterranean) with various environmental drivers and with fishing. We then evaluated the individual and joint effects of environmental conditions and fishing in various compartments of the food web. First we used a previously developed EwE model fitted to time series of data from 1978 to 2010 as a baseline configuration. The model included 40 functional groups and four fishing fleets. We first ran the original Ecospace spatial-temporal dynamic model using the original habitat configuration, in addition to fishing, and we predicted species distributions and abundances. Afterwards, we ran the new habitat foraging capacity model using the most important environmental drivers linked with the Ebro River delta dynamics (salinity, temperature, and primary production), in addition to depth, substrate and fishing, and we compared results with those from the original implementation of Ecospace. Three commercial species, European hake (Merluccius merluccius), anchovy (Engraulis encrasicolus) and sardine (Sardina pilchardus), were used to analyse results. Species distributions more closely matched the empirical information available from the study area when using the new habitat capacity model. Results suggested that the historical impacts of fishing and environmental conditions on the biomass and distributions of hake, anchovy and sardine were not additive, but mainly cumulative with a synergistic or antagonistic effect. Fishing had the highest impact on spatial modelling results while the spatial distribution of primary producers and depth followed in importance. This study contributes to the development of more reliable predictions of regional change in marine ecosystems of the Mediterranean Sea, MC was partially funded by the European Commission through the Marie Curie Career Integration Grant Fellowships – PCIG10-GA-2011-303534 – to the BIOWEB project and by the Spanish National Program Ramon y Cajal. This study is a contribution to the project ECOTRANS (CTM2011-26333, Ministerio de Economía y Competitividad, Spain)

Link to publishers version: 10.1371/journal.pone.0160354 It is well established that increasing mesh number in the circumference of a diamond-mesh trawl codend can reduce size selection for round fish, whereas selection for flat fish species is unaffected. This effect has also been documented in Mediterranean trawl fisheries. In contrast, no information is available with regard to the effect of increasing mesh number in the circumference of square-mesh codends on the size selection of round fish and flat fish species. A field study was devised to bridge this gap and formulate proposals aimed at improving trawl fishery management. Size selection data were collected for a round fish species, red mullet (Mullus barbatus), and two flat fish species, Mediterranean scaldfish (Arnoglossus laterna) and solenette (Buglossidium luteum). Fishing trials were conducted in the Adriatic Sea (Central Mediterranean) using three square-mesh codends that differed only in mesh number around the circumference. Results demonstrated that increasing the number of meshes from 107 to 213 reduced the 50% retention length (L50) for red mullet by 2.5 cm but did not affect size selection for the two flat fish species. In some fisheries, regulatory provisions regarding the number of meshes in the circumference should therefore be carefully considered both for diamond- and square-mesh codends.

An essential prerequisite of a sustainable fisheries management is the matching of biologically relevant processes and management action. In fisheries management and assessment, fish stocks are the fundamental biological unit, but the reasoning for the operational management unit is often indistinct and mismatches between the biology and the management action frequently occur. Despite the plethora of population genetic data on marine fishes, to date little or no use is made of the information, despite the fact that the detection of genetic differentiation may indicate reproductively distinct populations. Here, we discuss key aspects of genetic population differentiation in the context of their importance for fisheries management. Furthermore, we evaluate the population structure of all 32 managed marine fish species in the north-east Atlantic and relate this structure to current management units and practice. Although a large number of studies on genetic population structure have been published in the last decades, data are still rare for most exploited species. The mismatch between genetic population structure and the current management units found for six species (Gadus morhua, Melanogrammus aeglefinus, Merlangius merlangus, Micromesistius poutassou, Merluccius merluccius and Clupea harengus), emphasizes the need for a revision of these units and questions the appropriateness of current management measures. The implementation of complex and dynamic population structures into novel and less static management procedures should be a primary task for future fisheries management approaches.

An essential prerequisite of a sustainable fisheries management is the matching of biologically relevant processes and management action. In fisheries management and assessment, fish stocks are the fundamental biological unit, but the reasoning for the operational management unit is often indistinct and mismatches between the biology and the management action frequently occur. Despite the plethora of population genetic data on marine fishes, to date little or no use is made of the information, despite the fact that the detection of genetic differentiation may indicate reproductively distinct populations. Here, we discuss key aspects of genetic population differentiation in the context of their importance for fisheries management. Furthermore, we evaluate the population structure of all 32 managed marine fish species in the north-east Atlantic and relate this structure to current management units and practice. Although a large number of studies on genetic population structure have been published in the last decades, data are still rare for most exploited species. The mismatch between genetic population structure and the current management units found for six species (Gadus morhua, Melanogrammus aeglefinus, Merlangius merlangus, Micromesistius poutassou, Merluccius merluccius and Clupea harengus), emphasizes the need for a revision of these units and questions the appropriateness of current management measures. The implementation of complex and dynamic population structures into novel and less static management procedures should be a primary task for future fisheries management approaches.

The effect of modified atmosphere packaging (MAP 1: 70% CO2/30% N-2 and MAP 2: 50% CO2/30% N-2/20% O-2) and vacuum packaging (VP), on the shelf-life of chub mackerel (Scomber japonicus) fillets stored under refrigeration was studied. Quality assessment was based on sensory analysis and biochemical indices determination. Increase in total volatile basic nitrogen (TVBN) and trimethylamine nitrogen (TMAN) followed the order: MAP 1 < MAP 2 < VP < air (control samples). The presence of oxygen into the fish package (air or MAP) resulted in an increase in the 2-thiobarbituric acid (TBA) values in comparison with samples packaged in the absence of oxygen. The most effective MAP used was MAP 1 which contributed to a considerably slower rate of fish spoilage. Based primarily on odour scores it was observed that raw chub mackerel fillets stored in the presence of air remained acceptable up to ca. 11 days, VP and MAP 2 samples up to ca. 15-16 days, while MAP 1 samples up to ca. 20-21 days of storage. On the other hand, flesh texture and flesh colour of all packaged samples received scores above or equal than the acceptability limit up to ca. 13-14 days of storage. European Food Research and Technology

The combined effect of modified atmosphere packaging (MAP: 40% CO2/30% O-2/30% N-2) and oregano essential oil, on the shelf-life of lightly salted cultured sea bream (Sparus aurata) fillets stored under refrigeration was studied. Quality assessment was based on sensory analysis and biochemical indices determination. Total volatile basic nitrogen (TVBN) and trimethylamine nitrogen (TMAN) values were higher in sea brearn fillets stored in air followed by salted fillets stored in air. For salted sea bream. fillets stored under MAP the inhibition in the TVBN and TMAN values was evident in the order MAP < MAP/0.4% (v/w) oregano oil < MAP/0.8% (v/w) oregano oil indicating the preservative effect of oregano oil. Salting had a noticeable preservative effect but produced an increase in the 2-thiobarbituric acid (TBA) values while oregano oil had a strong antioxidant activity giving the lowest TBA values. All raw sea brearn fillet samples received acceptable sensory scores during the first 15-16 days of storage. The salted samples remained acceptable up to ca. 20-21 days while the MAP salted samples up to ca. 27-28 days of storage. The oregano oil addition in MAP salted samples yielded a distinct but pleasant flavor and contributed to a considerable slower process of fish spoilage given that the fillets treated with 0.8% (v/w) oregano oil were still sensory acceptable after 33 days of storage. The preservative effect was greater as the oregano oil concentration was greater. (c) 2005 Elsevier Ltd. All rights reserved. Food Chemistry