8 results on '"genetic innovations"'
Search Results
2. Silent rain: does the atmosphere-mediated connectivity between microbiomes influence bacterial evolutionary rates?
- Author
-
Jalasvuori, Matti
- Subjects
- *
RAINFALL , *MICROBIAL communities , *BIOSPHERE , *BACTERIOPHAGES , *BACTERIAL evolution , *GENOMES - Abstract
Air carries a vast number of bacteria and viruses over great distances all the time. This leads to continuous introduction of foreign genetic material to local, established microbial communities. In this perspective, I ask whether this silent rain may have a slowing effect on the overall evolutionary rates in the microbial biosphere. Arguably, the greater the genetic divergence between gene 'donors' and 'recipients', the greater the chance that the gene product has a deleterious epistatic interaction with other gene products in its genetic environment. This is due to the long-term absence of check for mutual compatibility. As such, if an organism is extensively different from other bacteria, genetic innovations are less probable to fit to the genome. Here, genetic innovation would be anything that elevates the fitness of the gene vehicle (e.g. bacterium) over its contemporaries. Adopted innovations increase the fitness of the compatible genome over incompatible ones, thus possibly tempering the pace at which mutations accumulate in existing genomes over generations. I further discuss the transfer of bacteriophages through atmosphere and potential effects that this may have on local dynamics and perhaps phage survival. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
3. Contributions possibles des innovations génétiques pour l'améloration de la compétitivité des filières cotonnières africaines
- Author
-
Mergeai G.
- Subjects
Genetic innovations ,cotton ,Gossypium hirsutum L. ,profi tability ,Africa ,Biotechnology ,TP248.13-248.65 ,Environmental sciences ,GE1-350 - Abstract
Possible contributions of genetic innovations to improvement in the competitivity of the cotton production and marketingchains in Africa. The 3 components of the profi tability of the cotton production and marketing chains which can beimproved following the development of genetic innovations concern: (i) the production cost of the cottonseed, thanks tothe introduction in the cultivated varieties of genes allowing to decrease the impact of the biotic (weeds, pests and diseases)and abiotic (drought, soil poverty, acidity and salinity) constraints, (ii) the cost of the ginning of the cottonseed and (iii) thequality of the various products of the cotton plant (fi ber, cakes, oil). The priorities to be retained for Africa regarding these3 components must absolutely take into account the characteristics of the local farming systems. In Africa, most of cottonis produced in farms of relatively small size with a low level of mechanization of the farming operations and a recourseto quantities of manure and pesticides defi nitely lower than elsewhere in the world whereas the levels of biotic and abioticconstraints are at least as high there as in the other continents. In this context, the priority of the genetic improvement programsshould aim at developing varieties with high quality fi ber, multi-resistant to the biotic and abiotic adversities, with the highestpossible ginning outturn and presenting an inhibition of the synthesis of the gossypol only at seed level. According to the localpriorities and resources available, the development of the new varieties should ideally be done by combining the approachesof the traditional genetic improvement assisted by the use of DNA markers and the functional genomics tools to direct theimplementation of targeted genetic transformations. This will not be possible without the maintenance of strong structures ofgenetic improvement directly in contact with the fi eld realities specifi c to each great zone of production. The exploitation of theimmense reserve of variability constituted by the wild diploid cotton species should play a key role to achieve these goals.
- Published
- 2006
4. Advances in genome editing technology and its promising application in evolutionary and ecological studies.
- Abstract
Genetic modification has long provided an approach for "reverse genetics", analyzing gene function and linking DNA sequence to phenotype. However, traditional genome editing technologies have not kept pace with the soaring progress of the genome sequencing era, as a result of their inefficiency, time-consuming and labor-intensive methods. Recently, invented genome modification technologies, such as ZFN (Zinc Finger Nuclease), TALEN (Transcription Activator-Like Effector Nuclease), and CRISPR/Cas9 nuclease (Clustered Regularly Interspaced Short Palindromic Repeats/ Cas9 nuclease) can initiate genome editing easily, precisely and with no limitations by organism. These new tools have also offered intriguing possibilities for conducting functional large-scale experiments. In this review, we begin with a brief introduction of ZFN, TALEN, and CRISPR/Cas9 technologies, then generate an extensive prediction of effective TALEN and CRISPR/Cas9 target sites in the genomes of a broad range of taxonomic species. Based on the evidence, we highlight the potential and practicalities of TALEN and CRISPR/Cas9 editing in non-model organisms, and also compare the technologies and test interesting issues such as the functions of candidate domesticated, as well as candidate genes in life-environment interactions. When accompanied with a high-throughput sequencing platform, we forecast their potential revolutionary impacts on evolutionary and ecological research, which may offer an exciting prospect for connecting the gap between DNA sequence and phenotype in the near future. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
5. Silent rain: does the atmosphere-mediated connectivity between microbiomes influence bacterial evolutionary rates?
- Author
-
Matti Jalasvuori
- Subjects
bacteriophages ,virukset ,Rain ,evoluutio ,Biology ,bacterial evolution ,Applied Microbiology and Biotechnology ,Microbiology ,Genome ,bakteriofagit ,Epistatic interaction ,bakteerit ,Evolution, Molecular ,03 medical and health sciences ,genetic innovations ,Bacteriophages ,Microbiome ,Gene ,Organism ,030304 developmental biology ,ilmakehä ,2. Zero hunger ,0303 health sciences ,Gene by environment ,Ecology ,Bacteria ,030306 microbiology ,Atmosphere ,Microbiota ,Genetic compatibility ,Biological Evolution ,Genetic divergence ,mikrobisto ,13. Climate action ,Evolutionary biology ,atmosphere ,evolutionary rate ,genetic compatibility ,leviäminen - Abstract
Air carries a vast number of bacteria and viruses over great distances all the time. This leads to continuous introduction of foreign genetic material to local, established microbial communities. In this perspective, I ask whether this silent rain may have a slowing effect on the overall evolutionary rates in the microbial biosphere. Arguably, the greater the genetic divergence between gene ‘donors’ and ‘recipients’, the greater the chance that the gene product has a deleterious epistatic interaction with other gene products in its genetic environment. This is due to the long-term absence of check for mutual compatibility. As such, if an organism is extensively different from other bacteria, genetic innovations are less probable to fit to the genome. Here, genetic innovation would be anything that elevates the fitness of the gene vehicle (e.g. bacterium) over its contemporaries. Adopted innovations increase the fitness of the compatible genome over incompatible ones, thus possibly tempering the pace at which mutations accumulate in existing genomes over generations. I further discuss the transfer of bacteriophages through atmosphere and potential effects that this may have on local dynamics and perhaps phage survival.
- Published
- 2020
6. Can you shrinkwrap a cow? Protections available for the intellectual property of the animal breeding industry.
- Author
-
Ogden, E. R. and Weigel, K.
- Subjects
- *
ANIMAL industry , *ANIMAL breeding , *INTELLECTUAL property , *TRADEMARK infringement , *PRICE discrimination , *TRADE regulation - Abstract
There are currently four main intellectual property protection statutory schemes available: copyright, trade secret, trademark and patent. Each of these protects a different aspect of intellectual property, which leaves gaps of protection when an innovation does not fit squarely within the boundaries of the statutes. Contracts allow the industry to tailor the protection desired. One very common approach is to license the product via contract. Licences allow intellectual property owners to retain ownership and give permission to others to use the product. Although there are several types of licences, the most common is the field of use licence, which limits the licensee's use of the product. This often leads to price discrimination where various levels of restriction are offered at corresponding prices. The more rights retained by the owner, the more restricted the buyer is and the lower the purchase price allowing customers to choose the level of restriction they are willing to accept. Therefore, the different uses and needs of various customers can be accounted for and reflected in the price. The animal breeding industry is currently struggling to protect their innovations falling into these statutory gaps. The protection for animal breeding industry innovations is most likely through contract law rather than traditional intellectual property law. By taking advantage of the unique nature of contracts, industry will be able to tailor protection and pricing to best suit the variety of customers and uses for the products sold. [ABSTRACT FROM AUTHOR]
- Published
- 2007
- Full Text
- View/download PDF
7. Advances in genome editing technology and its promising application in evolutionary and ecological studies.
- Author
-
Chen L, Tang L, Xiang H, Jin L, Li Q, Dong Y, Wang W, and Zhang G
- Abstract
Genetic modification has long provided an approach for "reverse genetics", analyzing gene function and linking DNA sequence to phenotype. However, traditional genome editing technologies have not kept pace with the soaring progress of the genome sequencing era, as a result of their inefficiency, time-consuming and labor-intensive methods. Recently, invented genome modification technologies, such as ZFN (Zinc Finger Nuclease), TALEN (Transcription Activator-Like Effector Nuclease), and CRISPR/Cas9 nuclease (Clustered Regularly Interspaced Short Palindromic Repeats/Cas9 nuclease) can initiate genome editing easily, precisely and with no limitations by organism. These new tools have also offered intriguing possibilities for conducting functional large-scale experiments. In this review, we begin with a brief introduction of ZFN, TALEN, and CRISPR/Cas9 technologies, then generate an extensive prediction of effective TALEN and CRISPR/Cas9 target sites in the genomes of a broad range of taxonomic species. Based on the evidence, we highlight the potential and practicalities of TALEN and CRISPR/Cas9 editing in non-model organisms, and also compare the technologies and test interesting issues such as the functions of candidate domesticated, as well as candidate genes in life-environment interactions. When accompanied with a high-throughput sequencing platform, we forecast their potential revolutionary impacts on evolutionary and ecological research, which may offer an exciting prospect for connecting the gap between DNA sequence and phenotype in the near future.
- Published
- 2014
- Full Text
- View/download PDF
8. Advances in genome editing technology and its promising application in evolutionary and ecological studies
- Author
-
Wen Wang, Lei Chen, Guojie Zhang, Hui Xiang, Linyi Tang, Lijun Jin, Yang Dong, and Qiye Li
- Subjects
Transcription activator-like effector nuclease ,Genetic innovations ,Ecology ,Cas9 ,Health Informatics ,Review ,Biology ,Zinc finger nuclease ,Genome ,DNA sequencing ,Computer Science Applications ,Domestication ,Genome editing ,Genetic modification ,CRISPR ,Life-environment interaction ,Gene - Abstract
Genetic modification has long provided an approach for "reverse genetics", analyzing gene function and linking DNA sequence to phenotype. However, traditional genome editing technologies have not kept pace with the soaring progress of the genome sequencing era, as a result of their inefficiency, time-consuming and labor-intensive methods. Recently, invented genome modification technologies, such as ZFN (Zinc Finger Nuclease), TALEN (Transcription Activator-Like Effector Nuclease), and CRISPR/Cas9 nuclease (Clustered Regularly Interspaced Short Palindromic Repeats/Cas9 nuclease) can initiate genome editing easily, precisely and with no limitations by organism. These new tools have also offered intriguing possibilities for conducting functional large-scale experiments. In this review, we begin with a brief introduction of ZFN, TALEN, and CRISPR/Cas9 technologies, then generate an extensive prediction of effective TALEN and CRISPR/Cas9 target sites in the genomes of a broad range of taxonomic species. Based on the evidence, we highlight the potential and practicalities of TALEN and CRISPR/Cas9 editing in non-model organisms, and also compare the technologies and test interesting issues such as the functions of candidate domesticated, as well as candidate genes in life-environment interactions. When accompanied with a high-throughput sequencing platform, we forecast their potential revolutionary impacts on evolutionary and ecological research, which may offer an exciting prospect for connecting the gap between DNA sequence and phenotype in the near future.
- Full Text
- View/download PDF
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