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Grass endophytic fungi have garnered increasing attention as a prolific source of bioactive metabolites with potential application across various fields, including pharmaceticals agriculture and industry. This review paper aims to synthesize knowledge on the diversity, isolation, and bioactivity of metabolites produced by grass endophytic fungi. Additionally, this approach aids in the conservation of rare and endangered plant species. Advanced analytical techniques such as high-performance liquid chromatography, liquid chromatograpy-mass spectrometry and gas chromatography are discussed as critical tools for metabolite identification and characterization. The review also highlights significant bioactive metabolites discovered to date, emphasizing their antimicrobial, antioxidant, and insecticidal activities and plant growth regulation properties. Besides address the challenges and future prospects in harnessing grass endophytic fungi for sustainable biotenological applications. By consolidating recent advancements and identifying agaps in the current research, this paper provides a comprehensive overview of the potential grass endophytic fungi as a valuable resource for novel bioactive compounds. [ABSTRACT FROM AUTHOR]

Botryosphaeriaceae species are important latent pathogens causing diseases on trees utilized in forestry and agriculture. In recent years, there has been an increase in the incidence and severity of branch dieback and decline on macadamia trees in South Africa, and species of Botryosphaeriaceae have been considered as a possible cause. Although botryosphaeria dieback has been well-studied in Australia, there is little information regarding these fungi on Macadamia in South Africa. The aims of this study were consequently to (i) identify species of Botryosphaeriaceae from Macadamia branches from main production regions in South Africa, (ii) compare the diversity of species between symptomatic and asymptomatic branches, as well as between different growing regions, (iii) and to consider their relative importance in causing dieback. Eight species and three putative hybrids of the Botryosphaeriaceae were identified based on a phylogenetic comparison of sequence data from the ITS rDNA, tub2, tef-1α and rpb2 loci. These included an unidentified Diplodia sp., and Lasiodiplodia sp., as well as L. gilanensis, L. theobromae, L. pseudotheobromae, Neofusicoccum kwambonambiense, N. luteum, N. parvum and three hybrid species. The unidentified species of Diplodia., Lasiodiplodia sp., L. gilanensis, and N. kwambonambiense are reported for the first time on Macadamia in South Africa. All species showed a potential to cause branch dieback symptoms, with species of Neofusicoccum identified as the most aggressive species. This study revealed a high level of diversity of Botryosphaeriaceae species and illustrates their potential as causal agents of dieback on Macadamia in South Africa. [ABSTRACT FROM AUTHOR]

Rice is a crucial crop for many people worldwide, especially in regions like Asia, Latin America, and parts of Africa. Thailand is one of the largest exporters of rice. Nowadays, farmers use chemicals to control rice disease, which can have negative effects on humans and the environment. Therefore, the objective of this study was to examine the plant-promoting capabilities of the endophytic fungal strains DMKU-R3G3 in greenhouse settings. The endophytic fungi strain DMKU-R3G3, which was isolated from organic rice root, was identified as Aspergillus cejpii based on morphological characteristics and phylogenetic analysis. The production of IAA was detected using Salkowski's reagent. After 7 days of incubation, the finding revealed that the strain cultivated in PDB supplemented with tryptophan yielded a greater concentration of IAA (25.45 μg/mL). The inoculation with A. cejpii DMKU-R3G3 significantly enhanced rice growth, as evidenced by notable increases in shoot height, root length, and fresh weight. Moreover, the chlorophyll content of the rice plants also increased by 1.78 times more than the control group. In addition, proteomic analysis revealed that rice responded toward the colonization of endophytic fungi by producing auxin-responsive proteins to regulate the IAA content in plant tissue and inducing total chlorophyll production due to the up-regulation of proteins in the chlorophyll biosynthesis pathway. The results obtained from this study lead to the conclusion that the A. cejpii strain DMKU-R3G3 possesses the capability to enhance plant growth through the production of phytohormones in greenhouse conditions. Therefore, endophytic A. cejpii DMKU-R3G3 has the potential to be a promising eco-friendly plant growth promoter for sustainable rice cultivation. [ABSTRACT FROM AUTHOR]

Very little is known about potential benefits of using AM inoculation as a tool to alleviate drought stress of trees grown under nursery conditions. There is some evidence that benefits of mycorrhiza on gas exchange parameters and growth of trees are proportionally greater when trees are subjected to drought stress. We hypothesized that inoculation with mycorrhiza would increase growth, nutrition, stem water potential and gas exchange of containerized almond (Prunus dulcis (Mill.) D.A. Webb) when young trees are grown under low water availability.In the spring of 2015 and 2016, forty containerized almond trees (Nonpareil scion grafted on Hansen 536, a peach/almond hybrid rootstock) were either inoculated or not with a commercially available arbuscular mycorrhizal inoculum and kept well-watered for 60 days in 2015 and 54 days in 2016, after which half of the plants were exposed to gradually reduced water availability over 38 days in 2015 and 61 days in 2016. Measurements included growth metrics, stem water potential, stomatal density, leaf NPK concentration, light saturated photosynthesis, and parameters calculated from CO2 response curves (Vcmax, J, TPU, Rd, gm, and stomatal limitation).The low-water treatment decreased stem water potential and reduced trunk diameter growth, light saturated photosynthesis (A), stomatal conductance (gs), Vcmax, J, TPU, gm, specific root length, leaf N and K concentration and total leaf N, P, and K content. Inoculation decreased root mass, increased leaf mass fraction, and decreased root mass fraction in 2015, but not in 2016. Neither stem water potential nor gas exchange were significantly altered by inoculation. Inoculation decreased leaf stomatal density, and slightly elevated leaf N and P concentrations in the low water treatments, although not consistently across years. Contrary to expectations we did not find substantially greater benefits from mycorrhizal inoculation in young drought stressed almond trees and conclude that the potential for mycorrhizal inoculant to alleviate drought stress in containerized trees is minimal.

Abstract Background Bilberry (Vaccinium myrtillus L.) is one of the most important economic and natural resources in Northern Europe. Despite its importance, the endophytic fungal community of the fruits has rarely been investigated. Biogeographic patterns and determinants of the fungal diversity in the bilberry fruit are poorly understood, albeit fungal endophytes can have a close relationship with the host plants. Here, we investigated the effect of climatic regions, and their weather conditions within growth season and soil properties on fungal endophytic communities of bilberry fruits collected from northern and southern regions of Finland using high-throughput sequencing technology targeting the internal transcribed spacer 2 ribosomal DNA region for fungi. Results Species richness and beta diversity (variation in community structure) were higher in the southern compared to the studied northern region. The weather condition of the growth season drove both fungal richness and community structure. Furthermore, abundance of the genera Venturia, Cladosporium, and Podosphaera was influenced by the weather, being different between the south and north regions. Conclusions We conclude that diversity and assembly structure of the fungal endophytes in bilberry fruits follow similar patterns as for foliar fungal endophytes, being shaped by various environmental factors, such as the climate and surrounding vegetation.

Background: Bilberry (Vaccinium myrtillus L.) is one of the most important economic and natural resources in Northern Europe. Despite its importance, the endophytic fungal community of the fruits has rarely been investigated. Biogeographic patterns and determinants of the fungal diversity in the bilberry fruit are poorly understood, albeit fungal endophytes can have a close relationship with the host plants. Here, we investigated the effect of climatic regions, and their weather conditions within growth season and soil properties on fungal endophytic communities of bilberry fruits collected from northern and southern regions of Finland using high-throughput sequencing technology targeting the internal transcribed spacer 2 ribosomal DNA region for fungi. Results: Species richness and beta diversity (variation in community structure) were higher in the southern compared to the studied northern region. The weather condition of the growth season drove both fungal richness and community structure. Furthermore, abundance of the genera Venturia, Cladosporium, and Podosphaera was influenced by the weather, being different between the south and north regions. Conclusions: We conclude that diversity and assembly structure of the fungal endophytes in bilberry fruits follow similar patterns as for foliar fungal endophytes, being shaped by various environmental factors, such as the climate and surrounding vegetation. [ABSTRACT FROM AUTHOR]

In the ever-evolving realm of agriculture, the convoluted interaction between plants and microorganisms have assumed paramount significance. Fungal endophytes, once perceived as mere bystanders within plant tissues, have now emerged as dynamic defenders of plant health. This comprehensive review delves into the captivating world of fungal endophytes and their multifaceted biocontrol mechanisms. Exploring their unique ability to coexist with their plant hosts, fungal endophytes have unlocked a treasure trove of biological weaponry to fend off pathogens and enhance plant resilience. From the synthesis of bioactive secondary metabolites to intricate signaling pathways these silent allies are masters of biological warfare. The world of fungal endophytes is quite fascinating as they engage in a delicate dance with the plant immune system, orchestrating a symphony of defense that challenges traditional notions of plant-pathogen interactions. The journey through the various mechanisms employed by these enigmatic endophytes to combat diseases, will lead to revelational understanding of sustainable agriculture. The review delves into cutting-edge research and promising prospects, shedding light on how fungal endophytes hold the key to biocontrol and the reduction of chemical inputs in agriculture. Their ecological significance, potential for bioprospecting and avenues for future research are also explored. This exploration of the biocontrol mechanisms of fungal endophytes promise not only to enrich our comprehension of plant-microbe relationships but also, to shape the future of sustainable and ecofriendly agricultural practices. In this intricate web of life, fungal endophytes are indeed the unsung heroes, silently guarding our crops and illuminating a path towards a greener, healthier tomorrow. [ABSTRACT FROM AUTHOR]

Endophytes are organism dwelling totally dynamic and novel biotopes this makes them able to produce novel biochemicals that may become assets to the future. This study aims at understanding the biochemical components of the endophytic fungus Phlebia sp. synthesis of gold and silver nanoparticles from it, and the antimicrobial as well as antioxidant ability of these green synthesised nanoparticles. Aqueous fungal extract was subjected for HRLCMS analysis which revealed 34 biochemicals within the extract. Silver and gold nanoparticles were also produced from the fungal extract. UV–vis analysis revealed a peak at 450 nm for silver nanoparticle and 550 nm for gold nanoparticles. FESEM analysis confirmed the presence of these nanoparticles with its spherical shape. Both of these nanoparticles were able to produce a conspicuous zone of inhibition in the antimicrobial tests against Escherichia coli, Salmonella paratyphi. For both of the organisms under study, a concentration-dependent expansion of the zone of inhibition was discovered in the nanoparticles. However, with silver nanoparticles, a relatively high zone of inhibition and vulnerability of the organism was discovered. Four in vitro free radical scavenging assays, including the DPPH, Hydroxyl, Superoxide, and Nitric oxide radical scavenging assays, were used for antioxidant analysis. The results of every test demonstrated that green synthesised silver nanoparticles had higher activity than gold nanoparticles. All of the tests showed that silver nanoparticles were more active than gold nanoparticles with the maximum value of 86.254 ± 0.296% being discovered at the greatest concentration of superoxide radical scavenging assay. [ABSTRACT FROM AUTHOR]

The interaction between Botanophila flies and Epichloë fungi is one of the few interactions in which grass-associated fungi are 'pollinated' by flies. We analysed the gains and losses for both interaction partners and the time factors determining cost dynamics. A hypothesis regarding the relationship between changes in the severity of grass infection with Epichloë fungus, size of fungal sexual structures (stromata), and fly presence (expressed as egg and larvae numbers) was tested. During a 3-year study conducted on permanent field plots, fungal infection of wild grass tussocks of Holcus lanatus and fly visits to fungal stromata were monitored. An increase in the number of shoots with stromata and a reduction in stromata size were observed. From one year to another, flies deposited fewer eggs on stromata, and larval body mass decreased. We explain these results by the deterioration of grass condition due to increased Epichloë infection, which resulted in higher maintenance costs for the fungal parasite. [ABSTRACT FROM AUTHOR]

In the ever-evolving realm of agriculture, the convoluted interaction between plants and microorganisms have assumed paramount significance. Fungal endophytes, once perceived as mere bystanders within plant tissues, have now emerged as dynamic defenders of plant health. This comprehensive review delves into the captivating world of fungal endophytes and their multifaceted biocontrol mechanisms. Exploring their unique ability to coexist with their plant hosts, fungal endophytes have unlocked a treasure trove of biological weaponry to fend off pathogens and enhance plant resilience. From the synthesis of bioactive secondary metabolites to intricate signaling pathways these silent allies are masters of biological warfare. The world of fungal endophytes is quite fascinating as they engage in a delicate dance with the plant immune system, orchestrating a symphony of defense that challenges traditional notions of plant-pathogen interactions. The journey through the various mechanisms employed by these enigmatic endophytes to combat diseases, will lead to revelational understanding of sustainable agriculture. The review delves into cutting-edge research and promising prospects, shedding light on how fungal endophytes hold the key to biocontrol and the reduction of chemical inputs in agriculture. Their ecological significance, potential for bioprospecting and avenues for future research are also explored. This exploration of the biocontrol mechanisms of fungal endophytes promise not only to enrich our comprehension of plant-microbe relationships but also, to shape the future of sustainable and ecofriendly agricultural practices. In this intricate web of life, fungal endophytes are indeed the unsung heroes, silently guarding our crops and illuminating a path towards a greener, healthier tomorrow.

Fungal endophytes have established new paradigms in the area of biomedicine due to their ability to produce metabolites of pharmacological importance. The present study reports the in vitro cytotoxic and in ovo antiangiogenic activity of the ethyl acetate (EA) extract of Penicillium oxalicum and their chemical profiling through Gas Chromatography–Mass Spectrometry analysis. Treatment of the EA extract of P. oxalicum to the selected human breast cancer cell lines (MDA‐MB‐231 and MCF‐7) leads to the reduced glucose uptake and increased nitric oxide production suggesting the cytotoxic activity of EA extract of P. oxalicum. Our results further show that treatment of EA extract of P. oxalicum attenuates the colony number, cell migration ability and alters nuclear morphology in both the human breast cancer cell lines. Furthermore, the treatment of EA extract of P. oxalicum mediates apoptosis by increasing the expression of BAX, P21, FADD, and CASPASE‐8 genes, with increased Caspase‐3 activity. Additionally, in ovo chorioallantoic membrane (CAM) assay showed that the treatment of EA extract of P. oxalicum leads to antiangiogenic activity with perturbed formation of blood vessels. Overall, our findings suggest that the EA extract of P. oxalicum show in vitro cytotoxic and antiproliferative activity against human breast cancer cell lines, and in ovo antiangiogenic activity in CAM model. [ABSTRACT FROM AUTHOR]

Grapevine Trunk Diseases (GTDs) are a major challenge to the grape industry worldwide. GTDs are responsible for considerable loss of quality, production, and vineyard longevity. Seventy-five percent of Chilean vineyards are estimated to be affected by GTDs. GTDs are complex diseases caused by several fungi species, including members of the Botryosphaeriaceae family and Phaeomoniella chlamydospora, considered some of the most important causal agents for these diseases in Chile. In this study, we isolated 169 endophytic and 209 rhizospheric fungi from grapevines grown under organic and conventional farming in Chile. Multiple isolates of Chaetomium sp., Cladosporium sp., Clonostachys rosea, Epicoccum nigrum, Purpureocillium lilacinum, and Trichoderma sp. were evaluated for their potential of biocontrol activity against Diplodia seriata, Neofusicoccum parvum, and Pa. chlamydospora. Tests of antagonism were carried out using two dual-culture-plate methods with multiple media types, including agar containing grapevine wood extract to simulate in planta nutrient conditions. Significant pathogen growth inhibition was observed by all isolates tested. Clonostachys rosea showed 98.2% inhibition of all pathogens in the presence of grapevine wood extract. We observed 100% pathogen growth inhibition when autoclaved lignified grapevine shoots were pre-inoculated with either C. rosea strains or Trichoderma sp. Overall, these results show that C. rosea strains isolated from grapevines are promising biocontrol agents against GTDs.

Introduction: Exploring endophytic fungi isolated from medicinal herbs could be a turning point in the research of secondary metabolites biosynthesis, as these endophytic fungi are capable of synthesizing the similar compounds as their host plant. The advantages of manipulating endophytic fungi for bioactive compound production are the reduction of dependency rate on slow-growing and rare plants, cost-effective, continuous process, environmentally friendly and high yield in a short period. Thus, the current study envisages investigating the influence of culture conditions against the anti-MRSA potential production of the endophytic fungal isolate, Ceratobasidium ramicola IBRLCM127 isolated from the local medicinal plant Curcuma mangga Valeton & Zijp. Methods: The endophytic fungal isolate was used to produce fungal metabolites through submerged fermentation. The physical parameter improvement was investigated using the 'one-factor-at-atime' technique. The fungal fermentative broth was subjected to an anti-MRSA assay using Lorian method, whereas the growth of a fungus was determined based on the cell growth weight. Results: The highest anti-MRSA potential of 42.50±0.1 U/ml and 5.49±0.1 g/L of mycelial growth was observed after improving the basal medium containing yeast extract sucrose broth incorporated with water extract from the host plant, 6 days old of inoculum age, 2 agar plugs of mycelia, incubation temperature of 25 0C and 12 days of cultivation 12 days of cultivation shaken at 120 rpm in the absence of light. Conclusion: The improved culture conditions shorten the incubation period and yield a significant enhancement of anti-MRSA potential and fungal growth with 13.27% and 10.91%, respectively. [ABSTRACT FROM AUTHOR]

In the present study, 51 fungal endophytes (FEs) were isolated, purified and identified from the healthy leaf segments of ten grapevine varieties based on the spore and colony morphologies and ITS sequence information. The FEs belonged to the Ascomycota division comprising eight genera viz., Alternaria, Aspergillus, Bipolaris, Curvularia, Daldinia, Exserohilum, Fusarium and Nigrospora. The in vitro direct confrontation assay against Colletotrichum gloeosporioides revealed that six isolates viz., VR8 (70%), SB2 (83.15%), CS2 (88.42%), MN3 (88.42%), MS5 (78.94%) and MS15 (78.94%) inhibited the mycelial growth of test pathogen. The remaining 45 fungal isolates showed 20–59.9% growth inhibition of C. gloeosporioides. Indirect confrontation assay manifested that the isolates MN1 and MN4a showed 79.09% and 78.18% growth inhibition of C. gloeosporioides followed by MM4 (73.63%) and S5 (71.81%) isolates. Isolate S5 and MM4 were found to produce azulene and 1,3-Cyclopentanedione, 4,4-dimethyl as antimicrobial volatile organic compounds, respectively. The 38 FEs showed PCR amplification using internal transcribed spacer universal primers. The BLAST search revealed highest similarity with the existing sequences in the database. The phylogenetic analysis revealed the occurrence of seven distinct clusters each corresponding to single genus. [ABSTRACT FROM AUTHOR]

Fungal plant pathogens can present major problems for most crop species. Currently, control of fungal diseases relies heavily on the use of fungicides. However, there are problems associated with fungicide use, including potential toxicity to non-target organisms and the development of resistance in the target fungus. New strategies are being sought to reduce fungicide use. One area of active research is the potential use of antifungal proteins from various fungal species as alternatives or complements to traditional fungicides. An antifungal protein, Efe-AfpA, from the fungal endophyte Epichloë festucae was previously found to protect plants from the pathogen Clarireedia jacksonii, the causal agent of dollar spot disease. Here we report that Efe-AfpA also has inhibitory activity against other important plant pathogens. These results suggest that it may be possible to develop Efe-AfpA as a biofungicide to target a broad range of destructive plant pathogens. [ABSTRACT FROM AUTHOR]

Rice is a crucial crop for many people worldwide, especially in regions like Asia, Latin America, and parts of Africa. Thailand is one of the largest exporters of rice. Nowadays, farmers use chemicals to control rice disease, which can have negative effects on humans and the environment. Therefore, the objective of this study was to examine the plant-promoting capabilities of the endophytic fungal strains DMKU-R3G3 in greenhouse settings. The endophytic fungi strain DMKU-R3G3, which was isolated from organic rice root, was identified as Aspergillus cejpii based on morphological characteristics and phylogenetic analysis. The production of IAA was detected using Salkowski’s reagent. After 7 days of incubation, the finding revealed that the strain cultivated in PDB supplemented with tryptophan yielded a greater concentration of IAA (25.45 μg/mL). The inoculation with A. cejpii DMKU-R3G3 significantly enhanced rice growth, as evidenced by notable increases in shoot height, root length, and fresh weight. Moreover, the chlorophyll content of the rice plants also increased by 1.78 times more than the control group. In addition, proteomic analysis revealed that rice responded toward the colonization of endophytic fungi by producing auxin-responsive proteins to regulate the IAA content in plant tissue and inducing total chlorophyll production due to the up-regulation of proteins in the chlorophyll biosynthesis pathway. The results obtained from this study lead to the conclusion that the A. cejpii strain DMKU-R3G3 possesses the capability to enhance plant growth through the production of phytohormones in greenhouse conditions. Therefore, endophytic A. cejpii DMKU-R3G3 has the potential to be a promising eco-friendly plant growth promoter for sustainable rice cultivation.

A new compound, penicilliumone A (1) was isolated from Penicillium sp. HT-G-8, a fungal endophyte of Tripterygium hypoglaucum. The structure of 1 was elucidated by IR, MS, 1D and 2D NMR spectra. Monoamine oxidase (MAO), acetylcholinesterase (AChE) and phosphoinositide 3-kinase (PI3K) inhibitory activities of 1 were also tested. [ABSTRACT FROM AUTHOR]

Biotrophic fungal plant pathogens can balance their virulence and form intricate relationships with their hosts. Sometimes, this leads to systemic host colonization over long time scales without macroscopic symptoms. However, how plant-pathogenic endophytes manage to establish their sustained systemic infection remains largely unknown. Here, we present a genomic and transcriptomic analysis of Thecaphora thlaspeos. This relative of the well studied grass smut Ustilago maydis is the only smut fungus adapted to Brassicaceae hosts. Its ability to overwinter with perennial hosts and its systemic plant infection including roots are unique characteristics among smut fungi. The T. thlaspeos genome was assembled to the chromosome level. It is a typical smut genome in terms of size and genome characteristics. In silico prediction of candidate effector genes revealed common smut effector proteins and unique members. For three candidates, we have functionally demonstrated effector activity. One of these, TtTue1, suggests a potential link to cold acclimation. On the plant side, we found evidence for a typical immune response as it is present in other infection systems, despite the absence of any macroscopic symptoms during infection. Our findings suggest that T. thlaspeos distinctly balances its virulence during biotrophic growth ultimately allowing for long-lived infection of its perennial hosts.

Abstract Zizania latifolia is a popular aquatic vegetable in China because of its enlarged edible stems resulting from persistent infection by a fungal endophyte, Ustilago esculenta. Fenaminosulf (FM) is a germicide that can be used to improve agricultural crop yields. In Z. latifolia fields, appropriate spraying of FM not just controls diseases, but also promotes an earlier harvest of Z. latifolia. In this study, we show that the timing of gall formation was advanced and the plant’s yield was increased significantly under a high concentration treatment of FM. Yet FM had a strong inhibitory effect on the growth of U. esculenta in vitro, while the transcript levels of mating-type alleles, cell metabolism-related genes and chitin synthase genes were all substantially downregulated. Through a transcriptome analysis, we investigated changes in gene expression of the host Z. latifolia and fungal endophyte U. esculenta in response to FM. FM directly affected the growth of Z. latifolia by altering the expression level of genes involved in plant-pathogen interactions, plant hormone signal transduction and some metabolism pathways. By contrast, FM had little effect on U. esculenta growing inside of Z. latifolia. Collectively, our results provide a more in-depth understanding of the molecular processes that promote gall formation in Z. latifolia, while also identifying potential targets for genetic manipulation to improve the yield and quality of Z. latifolia, in a safer and more effective way.

Fungal endophytes are critical members of the plant microbiome, but their community dynamics throughout an entire growing season are underexplored. Additionally, most fungal endophyte research has centred on seed‐reproducing hosts, while spore‐reproducing plants also host endophytes and may be colonized by unique community members. In order to examine annual fungal endophyte community dynamics in a spore‐reproducing host, we explored endophytes in a single population of ferns, Polystichum munitum, in the Pacific Northwest. Through metabarcoding, we characterized the community assembly and temporal turnover of foliar endophytes throughout a growing season. From these results, we selected endophytes with outsized representations in sequence data and performed in vitro competition assays. Finally, we inoculated sterile fern gametophytes with dominant fungi observed in the field and determined their effects on host performance. Sequencing demonstrated that ferns were colonized by a diverse community of fungal endophytes in newly emerged tissue, but diversity decreased throughout the season leading to the preponderance of a single fungus in later sampling months. This previously undescribed endophyte appears to abundantly colonize the host to the detriment of other microfungi. Competition assays on a variety of media types failed to demonstrate that the dominant fungus was competitive against other fungi isolated from the same hosts, and inoculation onto sterile fern gametophytes did not alter growth compared to sterile controls, suggesting its effects are not antagonistic. The presence of this endophyte in the fern population probably demonstrates a case of repeated colonization driving competitive exclusion of other fungal community members. [ABSTRACT FROM AUTHOR]

Endophytes are one of the symbiotic associations which can be successfully utilized to mitigate negative effects of abiotic stress in agricultural crops. Habitat adapted symbiotic fungal endophytes are known to impart drought tolerance in host plants. This study aimed at evaluating fungal endophytes of drought adapted plants against drought stress in maize. Fungal endophytes were isolated from arid and semi-arid regions of Karnataka and screened for their ability to grow in matric modified media using Polyethylene glycol (PEG 8000). Out of 65 isolates, six isolates (P1R1, P4L5, P6R3, P6R4, P10R1 and P12R2) showed increased mycelial growth up to -10.31 MPa (30 % PEG). The six fungal endophytes were evaluated for their ability to alleviate drought stress and improve growth of maize seedlings at PEG induced drought stress under in vitro condition. Maize seedlings inoculated with fungal endophytes showed significant increase in shoot length under drought stress after 10 days compared to control. Among six endophytes, the isolate P10R1 significantly enhanced shoot and root length of maize. The fungus was identified as Alternaria burnsi by using ITS region sequences. This study revealed that the fungal endophyte, Alternaria burnsi isolated from drought adapted plant has ability to mitigate drought stress and improve the maize growth under drought condition. [ABSTRACT FROM AUTHOR]

Epichloë (Ascomycota: Clavicipitaceae) fungi can form an intriguing interaction with Botanophila flies. The fungi live within above-ground shoots of grasses. Some species (type I) only reproduce sexually by forming stromata on all host culms (choke disease). Stromata produce haploid spores (spermatia) that fertilize stromata of opposite mating type to form dikaryotic cells. A second category of Epichloë species (type II) produces stromata on only some of the host culms; culms without choke produce flowers and seeds. These Epichloë can reproduce asexually by invading host seed, as well as sexually. Female Botanophila flies visit stromata for feeding and oviposition. Spermatia pass through the gut of Botanophila intact and viable. Flies can cross-fertilize the fungus during defecation after egg laying. Hence, we described the interaction as a mutualism similar to pollination. Yet, subsequent work by others and ourselves showed that visitation by Botanophila flies was not necessary for cross fertilization of Epichloë. We believe these contradictory results can be reconciled from an evolutionary perspective, if one takes into account the reproductive mode of the fungus. We explore a novel hypothesis to reconcile this contradiction, its predictions and discuss ways in which to test them. [ABSTRACT FROM AUTHOR]

Seed fungal endophytes play an important beneficial role in the formation of the seedling mycobiome and contribute to plant establishment, but can also occur as latent pathogens and saprotrophs. Current knowledge on the function and diversity of seed fungal endophytes has been gained through studies in agricultural systems whilst knowledge from natural systems is relatively less. We used two co-occurring species from the genus Banksia from four sites in Australia's Sydney Basin Bioregion to investigate the abundance and diversity of seed fungal endophyte communities present in natural ecosystem hosts. Based on results from culturing and DNA sequence analysis of multiple loci, we found that Banksia seeds house a diverse range of fungal endophyte species, that when assigned to functional guilds belonged to multiple trophic modes. Thirty-one of the fungal taxa identified had not been previously reported as endophytes. Amongst the 58 Operational Taxonomic Units identified, Leotiomycetes and Sordariomycetes were the dominant classes and Banksiamyces (Leotiomycetes) and Penicillium (Sordariomycetes) the dominant genera, with many of the species isolated recorded in the literature as having a limited distribution. The two Banksias shared few fungal endophyte species, which were not always present across all study sites. We revealed a 'hidden diversity' within seeds of Banksia from natural ecosystems and provided insights into the influence host species can have on the seed mycobiome. • Fifty-eight fungal taxa were isolated from Banksia ericifolia and B. serrata seed. • Thirty-one of the 58 seed fungi had not been recorded as seed endophytes previously. • Majority of isolated fungi were Banksiamyces and Penicillium. • Majority of seed fungi isolated were assigned as saprotrophs or multi-trophic ecologicalmodes. • The two Banksia species shared few fungal species, which were not always present across all study sites. [ABSTRACT FROM AUTHOR]

Asexual Epichloë are endophytic fungi that form mutualistic symbioses with cool-season grasses, conferring to their hosts protection against biotic and abiotic stresses. Symbioses are maintained between grass generations as hyphae are vertically transmitted from parent to progeny plants through seed. However, endophyte transmission to the seed is an imperfect process where not all seeds become infected. The mechanisms underpinning the varying efficiencies of seed transmission are poorly understood. Host gene expression in response to Epichloë sp. LpTG-3 strain AR37 was examined within inflorescence primordia and ovaries of high and low endophyte transmission genotypes within a single population of perennial ryegrass. A genome-wide association study was conducted to identify population-level single nucleotide polymorphisms (SNPs) and associated genes correlated with vertical transmission efficiency. For low transmitters of AR37, upregulation of perennial ryegrass receptor-like kinases and resistance genes, typically associated with phytopathogen detection, comprised the largest group of differentially expressed genes (DEGs) in both inflorescence primordia and ovaries. DEGs involved in signaling and plant defense responses, such as cell wall modification, secondary metabolism, and reactive oxygen activities were also abundant. Transmission-associated SNPs were associated with genes for which gene ontology analysis identified "response to fungus" as the most significantly enriched term. Moreover, endophyte biomass as measured by quantitative PCR of Epichloë non-ribosomal peptide synthetase genes, was significantly lower in reproductive tissues of low-transmission hosts compared to high-transmission hosts. Endophyte seed-transmission efficiency appears to be influenced primarily by plant defense responses which reduce endophyte colonization of host reproductive tissues. [ABSTRACT FROM AUTHOR]

Dollar spot disease, caused by the fungal pathogen Clarireedia jacksonii, is a major problem in many turfgrass species, particularly creeping bentgrass (Agrostis stolonifera). It is well-established that strong creeping red fescue (Festuca rubra subsp. rubra) exhibits good dollar spot resistance when infected by the fungal endophyte Epichloë festucae. This endophyte-mediated disease resistance is unique to the fine fescues and has not been observed in other grass species infected with other Epichloë spp. The mechanism underlying the unique endophyte-mediated disease resistance in strong creeping red fescue has not yet been established. We pursued the possibility that it may be due to the presence of an abundant secreted antifungal protein produced by E. festucae. Here, we compare the activity of the antifungal protein expressed in Escherichia coli, Pichia pastoris, and Penicillium chrysogenum. Active protein was recovered from all systems, with the best activity being from Pe. chrysogenum. In greenhouse assays, topical application of the purified antifungal protein to creeping bentgrass and endophyte-free strong creeping red fescue protected the plants from developing severe symptoms caused by C. jacksonii. These results support the hypothesis that Efe-AfpA is a major contributor to the dollar spot resistance observed with E. festucae-infected strong creeping red fescue in the field, and that this protein could be developed as an alternative or complement to fungicides for the management of this disease on turfgrasses. [ABSTRACT FROM AUTHOR]

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The present study has been designed to fabricate fungal endophyte-assisted gold nanoparticles (AuNPs) and elucidate their anti-breast cancer potential. The aqueous extract of fungal endophyte Penicillium oxalicum (PO), associated with the medicinal plant Amoora rohituka , was used for the fabrication of AuNPs (POAuNPs). Physico-chemical characterization using Ultraviolet-visible spectroscopy, Fourier transform infrared, X-ray diffraction, Dynamic light scattering, Zeta potential, Transmission electron microscopy and Field emission scanning electron microscopy analysis revealed stable, uniform distribution, spherical shape and crystalline nature of POAuNPs with a size range of 3-46 nm. Furthermore, the POAuNPs potentially inhibited the growth of pathogenic bacterial strains Escherichia coli and Staphylococcus aureus . The synthesized POAuNPs have shown potential antioxidant effects against 2,2-diphenyl-1-picrylhydrazyl (DPPH), superoxide and nitric oxide (NO) radical scavenging assays with an EC 50 value of 8.875 ± 0.082, 52.593 ± 2.506 and 43.717 ± 1.449 µg mL -1 , respectively. Moreover, the value of EC 50 for the total antioxidant capacity of POAuNPs was found to be 23.667 ± 1.361 µg mL -1 . The cell viability of human breast cancer cells, MDA-MB-231 and MCF-7, was found to be reduced after treatment with POAuNPs, and IC 50 values were found to be 19.753 ± 0.640 and 35.035 ± 0.439 µg mL -1 , respectively. Further, in vitro biochemical assays revealed that POAuNPs induces metabolic reprogramming in terms of reduced glucose uptake, increased lactate dehydrogenase (LDH) release and, disruption of oxidative balance through depletion of glutathione levels, increased nitric oxide (NO) and lipid peroxidation levels as a possible pathway to suppress human breast cancer cell proliferation. Apoptosis-specific nuclear modulations induced by POAuNPs in human breast cancer cells were validated through 4',6-diamidino-2-phenylindole (DAPI) nuclear staining. The present investigation thus attempts to show the first ever fabrication of AuNPs using an aqueous extract of P. oxalicum associated with A. rohituka . The results revealed unique physico-chemical characteristics of mycogenic AuNPs, and screening their effect against breast cancer via metabolic reprogramming and induction of apoptosis thus adds great significance for cancer therapeutics, suggesting further exploration to develop nanotherapeutic drugs., (© 2024 IOP Publishing Ltd. All rights, including for text and data mining, AI training, and similar technologies, are reserved.)

Chemical prospection for the mycelial extract of the fungus Acremonium sp. Strain MNA-F-1, derived from the inner tissue of anise roots (Pimpnella anisum L., family Apiaceae), led to the isolation and characterization of one previously undescribed natural product, acremochlorin S (1), together with five related derivatives (2-6) and an alkaloidal metabolite, ilicicolin H (7). Structure elucidation of the isolated compounds was determined through comprehensive 1D/2D NMR spectroscopic analyses and HR-ESI-MS measurements. The absolute configuration of acremochlorin S (1) was concluded based on the comparison of its experimental and calculated electronic circular dichroism (ECD) spectra implementing Time-dependent density functional theory (TDDFT). All isolated compounds were assessed for their antibacterial activity against Staphylococcus aureus, Escherichia coli and Mycobacterium tuberculosis, where several compounds revealed potent activities against tested Gram-positive strains., Competing Interests: Declaration of competing interest The authors declare no competing interest., (Copyright © 2024 Elsevier B.V. All rights reserved.)

Zizania latifolia is a popular aquatic vegetable in China because of its enlarged edible stems resulting from persistent infection by a fungal endophyte, Ustilago esculenta. Fenaminosulf (FM) is a germicide that can be used to improve agricultural crop yields. In Z. latifolia fields, appropriate spraying of FM not just controls diseases, but also promotes an earlier harvest of Z. latifolia. In this study, we show that the timing of gall formation was advanced and the plant's yield was increased significantly under a high concentration treatment of FM. Yet FM had a strong inhibitory effect on the growth of U. esculenta in vitro, while the transcript levels of mating-type alleles, cell metabolism-related genes and chitin synthase genes were all substantially downregulated. Through a transcriptome analysis, we investigated changes in gene expression of the host Z. latifolia and fungal endophyte U. esculenta in response to FM. FM directly affected the growth of Z. latifolia by altering the expression level of genes involved in plant-pathogen interactions, plant hormone signal transduction and some metabolism pathways. By contrast, FM had little effect on U. esculenta growing inside of Z. latifolia. Collectively, our results provide a more in-depth understanding of the molecular processes that promote gall formation in Z. latifolia, while also identifying potential targets for genetic manipulation to improve the yield and quality of Z. latifolia, in a safer and more effective way. [ABSTRACT FROM AUTHOR]

Sophora alopecuroides L. is a traditional Chinese medicine used for the treatment of several different disease states including bacillary dysentery and enteritis. But importantly, it also plays a role as an anti-tumor agent. That said, little is known about the role endophytes play regarding the clinically bioactive metabolites in S. alopecuroides. In order to explore the effects of endophytic fungi on the accumulation, quality, and correlation in the content of the medicinal compounds, the structural diversity of endophytic fungi in S. alopecuroides was analyzed. The relationship between endophytes and quinolizidine alkaloids (QAs), housed within the seeds of S. alopecuroides, which were interpreted based on established methods of high-throughput sequencing and high-performance liquid chromatography. A total of 1,034,418 effective sequence reads and 257 operational taxonomic units (OTUs) were obtained from 33 samples which were sourced from 11 different sampling sites and further classified into 9 phyla, 20 classes, 45 orders, 85 families, and 118 genera. Ascomycota was found to be the dominant phylum of endophytic fungi in S. alopecuroides, with a relative abundance ranging from 60.85 to 98.30%. Alternaria, Cladosporium, Filobasidium, and an unidentified Ascomycota were the core-shared endophytes, accounting for 49.96, 27.12, 14.83, and 7.88%, respectively. Correlation analysis showed that the Simpson’s diversity index of endophytic fungal community in S. alopecuroides was significantly positively correlated with the Oxymatrine (OMA) content in different areas, while the Chao and Shannoneven indexes were significantly negatively correlated with OMA. The endophytic fungi of Alternaria were positively correlated with the content of OMA, Oxysophocarpine (OSC), and total QAs. This study has mastered the endophytic fungi resources of S. alopecuroides, explored potential functional endophytic fungi, and provided a scientific basis for using biological fertilization strategies to improve the quality of S. alopecuroides. [ABSTRACT FROM AUTHOR]

• Isolation of thirty-two fungal endophytes from stem and bark of Albizia lebbeck (L.) Benth. • Screening of fungal endophytes for extracellular enzymes amylase, protease, lipase, laccase, cellulase and gelatinase. • Exploitation of crude enzymes of endophyte Aspergillus niger in bioremediation of municipal waste water, blood stain removal, biodegradation of oil, dye decolorization of methylene blue and methyl orange, saccharification of paper and baggase and extraction of silver from x-ray film. • First report on extracellular enzyme screening of Albizia lebbeck (L.) Benth endophytes. Endophytic fungi reside inside plants in a mutualistic relationship with the host and produce numerous bioactive compounds, including extracellular enzymes. A rich diversity of endophytic fungi associated with the medicinal plant Albizia lebbeck (L.) Benth was bio-prospected in the present study. Thirty-three isolates obtained from the plant were assessed for secretion of six different extracellular hydrolytic enzymes. The results showed that 38%, 9%, 69%, 16%, 38%, and 13% of the endophytic isolates could produce amylase, protease, lipase, laccase, cellulase, and gelatinase enzymes, respectively. Overall, 78% of the isolates showed positive results for one or the other enzyme. Aspergillus niger (Isolate 8) isolated from the bark proved to be most efficient in producing all the enzymes and was further exploited for various applications. The crude fungal amylase of the isolate helped in 39.08% reduction in biochemical oxidation demand (BOD) of municipal wastewater. Effective blood stain removal from the white cotton cloth was achieved when crude protease was used in combination with detergent. 13.29% biodegradation of vegetable oil was observed using fungal lipase. Dye decolorization of methylene blue (71.65%) and methyl orange (56.53%) was observed by fungal laccase. Saccharification of bagasse (83.94%) and paper (64.93%) was achieved by using fungal cellulase. Complete extraction of silver from waste X-ray films was achieved by crude gelatinase. The results obtained in the present study can further be strengthened using purified enzymes. [ABSTRACT FROM AUTHOR]

The insect-pathogenic fungus Beauveria bassiana (Bb) colonizes several plant species as an endophyte. However, the diversity of plants colonized and the extent of colonization by this fungus have not been summarized comprehensively across all plant species. To fill this knowledge gap, a meta-analysis of published studies (years 2002–2018) on the percentage of B. bassiana plant colonization across the plant kingdom was conducted. We collected 232 published papers from which 1,051 studies (individual treatments) were extracted and analyzed with Comprehensive Meta-Analysis, Version 3 (CMA) software. Factors (n = 26) influencing plant colonization by B. bassiana were identified. Across all studies, the mean endophytic colonization of B. bassiana was 29% in different plant taxa. Plant colonization by B. bassiana was highest for isolates collected from insects. Most studies applied B. bassiana at 1 × 108 conidia/ml; however, plant colonization was greatest with an application rate of 1 × 1012 conidia/ml. Among all plant hosts, colonization percentage was highest in faba bean, plants in the family Brassicaceae, angiosperms (eudicots, annuals), plants classified with a forb/herb/vine growth habit, and plants with fibrous or tap root systems. As an inoculant, B. bassiana was most frequently applied to the whole plant after true leaves had developed. The foliar spray was the most studied inoculation method, but the application of solid grain substrate to foliage gave higher plant colonization. Studies conducted in controlled environments resulted in higher endophytic colonization with B. bassiana than field studies. Endophytic B. bassiana presence was confirmed primarily with microscopy, rather than molecular methods. High heterogeneity (I2 = 97%) across studies was identified with large variability in endophytic B. bassiana colonization across a diversity of plant species. These findings increase our understanding and knowledge of the endophytic lifestyle of B. bassiana, which will facilitate the development of novel, sustainable, and eco-friendly disease management strategies with B. bassiana. [ABSTRACT FROM AUTHOR]

The cosmopolitan fungal genus Trichoderma contains species commonly found in other fungi, on plant litter, or living plants, showing parasitic, saprophytic, or symbiotic lifestyles. Such versatility results from its genomic repertoire giving rise to great species diversity. Currently, there are many accepted Trichoderma species, and probably many remain to be discovered and described. Here, we report the whole-genome sequence and functional analysis of a new endophytic Trichoderma species isolated from orchid roots and insights into genome evolution, especially regarding carbohydrate-active enzymes related to plant cell wall degradation (pcwdCAZymes). Phylogenetic analysis indicated that this Trichoderma isolate was a new species, proposed in this study as Trichoderma orchidacearum sp. nov. We detected evidence of genome simplification in T. orchidacearum evolution, such as the reduced repertoire of protein-coding genes (8,903 genes) and the contraction of many gene families related to gene expression regulation, signal transduction, oxidoreductases, and hydrolases. Similar evolutionary events also occurred for other species, such as T. reesei and T. longibrachiatum, and were related to shifts from mycoparasitism to other nutritional strategies. The exoproteome analysis combined with plant cell wall-degrading enzyme activities evidenced the ability of T. orchidacearum to feed on plant biomass, despite the large imbalance between cellulolytic and xylanolytic enzymes. The results obtained here increase the knowledge about the evolution of Trichoderma species and contribute to a better understanding of the phenotypic diversity within the genus. [ABSTRACT FROM AUTHOR]

The medicinal plant Juniperus oxycedrus is less recognized for the diversity of its fungal endophytes and their potential to produce extracellular enzymes. The present study is the first report on the isolation and identification of a mesophilic endophytic strain JO-A, Preussia africana, from fresh stems of the J. oxycedrus endemic tree in the Ifrane region-Morocco, and the evaluation of its ability to produce cellulases. A one-time multi-parameter one-factor screening was optimized to select factors that enhance cellulase production in P. africana. The maximum production of both CMCase and FPase activities were 1.913 IU.mL−1 and 0.885 IU.mL−1, respectively, when the medium was supplemented with 2% w/v glucose. These remarkable titers were tenfold greater than those obtained under the initial non-optimized conditions. This mesophilic P. africana JO-A strain grows and actively produces cellulases at 37 °C demonstrating its great potential for various biotechnology applications. The cellulolytic extract showed the highest enzymatic activities at pH 5.0 and 50 °C with a half-life of 24 h at 50 °C. [ABSTRACT FROM AUTHOR]

Plant endosymbionts (endophytes) influence host plant health and express genotype-dependent ecological relationships with plant hosts. A fungal species intended to confer host plant resistance to a forest pathogen was used as inoculum to test for effects of inoculation on disease resistance, microbiomes, and phytochemistry of a threatened pine species planted in a restoration setting. Correlations of inoculation presence/absence, phytochemistry, spatial location of seedlings, maternal seed sources, and fungal endophytic communities in the foliage of six-year-old whitebark pine (Pinus albicaulis) seedlings were assessed five years after an experimental inoculation of seedlings with foliar endophytic fungi cultured from whitebark pine trees at Crater Lake National Park, including Paramyrothecium roridum. We hypothesized that P. roridum would modify host microbiomes in a manner that combats white pine blister rust disease. Our assessment of seedlings in the field five years after inoculation allowed us to consider whether inoculation stimulated long-lasting changes in microbiome communities and whether effects varied by seedling genetic family. Tests for effects of endophyte inoculation on disease resistance were inconclusive due to current low levels of rust infection observed at the field site. Foliar fungal endophyte richness and Shannon diversity varied with maternal seed sources. Isotopic stoichiometry and phytochemistry did not vary with seedling spatial proximity, inoculation treatment, or maternal seed family. However, endophyte community composition varied with both seedling spatial proximity and maternal seed sources. Endophytic communities did not vary with the inoculation treatment, and the hypothesized biocontrol was not detected in inoculated seedlings. We draw three conclusions from this work: (1) fungal microbiomes of whitebark pine seedlings across our study site did not vary with host phytochemical signatures of ecophysiological status, (2) the inoculation of P. albicaulis seedlings with a mixture of fungal endophytes did not lead to persistent systemic changes in seedling foliar microbiomes, and (3) in correspondence with other studies, our data suggest that maternal seed source and spatial patterns influence fungal endophyte community composition. [ABSTRACT FROM AUTHOR]

Endophytes are a potent source of bioactive compounds that mimic plant-based metabolites. The relationship of host plant and endophyte is significantly associated with alteration in fungal colonisation and the extraction of endophyte-derived bioactive compounds. Screening of fungal endophytes and their relationship with host plants is essential for the isolation of bioactive compounds. Numerous bioactive compounds with antioxidant, antimicrobial, anticancer, and immunomodulatory properties are known to be derived from fungal endophytes. Bioinformatics tools along with the latest techniques such as metabolomics, next-generation sequencing, and metagenomics multilocus sequence typing can potentially fill the gaps in fungal endophyte research. The current review article focuses on bioactive compounds derived from plant-associated fungal endophytes and their pharmacological importance. We conclude with the challenges and opportunities in the research area of fungal endophytes.

Three new sorbicillinoids sorbicatechols E -G (1 – 3), along with seven known compounds 4 – 10 , were obtained from the ethanol extract of Penicillium sp. HS-11, a fungal endophyte of the medicinal plant Huperzia serrata. The structures of 1 – 3 were established by detailed interpretation of the spectroscopic data and their absolute configurations were established by comparative analyses of the ECD spectra. Sorbicatechol G (3) represented the first hybrid sorbicillinoid bearing a tetralone skeleton. In the in-vitro bioassay, trichodimerol (5) exhibited moderate inhibitory activity against the Escherichia coli β -glucuronidase (EcGUS) with an IC 50 value of 92.0 ± 9.4 μM. [Display omitted] [ABSTRACT FROM AUTHOR]

• FO12 did not exert any evident pathogenic effects on eight herbaceous hosts. • FO12 promoted plant growth in cotton, cucumber, pepper, sunflower, and wheat. • FO12 colonized the root and stem tissues of all herbaceous hosts as an endophyte. • Confocal laser scanning microscopy imaging showed that FO12 root colorization progressed. The nonpathogenic strain Fusarium oxysporum FO12 has been characterized as an effective biological control agent against Verticillium dahliae in olive. Nevertheless, the endophytic role of FO12 in herbaceous hosts is still uncertain. Thus, the aim of this study was to demonstrate the nonpathogenic character of FO12 in eight V. dahliae -susceptible herbaceous hosts and to evaluate its ability to promote plant growth. To this end, plants of each host were grown in pots filled with sterile peat moss and inoculated by irrigation with a conidial suspension of FO12 (106 conidia ml−1) two times—at sowing and at the emergence of the first true leaves. Many plants irrigated with sterile distilled water were included as controls. Sampling was conducted at 7, 14, 21, and 28 days after the second inoculation. The fresh weight and length of the aerial parts, roots, and whole plants were determined at each sampling time. Fungal colonization was assessed via quantitative and qualitative methods, including microbiological isolation from roots and stems and confocal laser scanning microscopy (CLSM) imaging at each sampling time. FO12 exhibited the ability to endophytically colonize the roots and stems of the inoculated plants. However, the effect on growth and the degree of colonization varied depending on the host. FO12 did not exert any evident pathogenic effects or negative effects on plant growth or development. The growth of the eggplant, lettuce, and tomato plants in the FO12 treatment group was similar to that in the control group, whereas the relative area under the growth progress curve was significantly greater than that in the control group for plant length in cotton and cucumber; for root fresh weight in pepper, sunflower, and wheat; and for plant fresh weight in sunflower and wheat. These results highlight the need to continue researching the interaction between FO12 and V. dahliae in a wider range of plant species of agronomic interest. [Display omitted] [ABSTRACT FROM AUTHOR]