20,224 results on '"flowering"'
Search Results
2. Adaptation to reductions in chilling availability using variation in PLANT HOMOLOGOUS TO PARAFIBROMIN in Brassica napus.
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Warner, Samuel, O'Neill, Carmel M., Doherty, Rebecca, Wells, Rachel, and Penfield, Steven
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RAPESEED ,SPRING ,AUTUMN ,FLOWER development ,CLIMATE change ,FLOWERING time ,FLOWERING of plants - Abstract
Winter annual crops are sown in late summer or autumn and require chilling to promote flowering the following spring. Floral initiation begins in autumn and winter, and in winter oilseed rape (OSR), continued chilling during flower development is necessary for high yield potential. This can be a problem in areas where chilling is not guaranteed, or as a result of changing climates. Here, we used chilling disruption and low chilling to identify loci with the potential to increase chilling efficiency in winter OSR. We report that time to flowering and yield potential under low chill conditions are affected by variation at the PLANT HOMOLOGOUS TO PARAFIBROMIN gene, a component of the plant PAF1c complex. We show that increases in winter chilling given to developing flowers can improve seed yields and that loss of function of BnaPHP.A05 leads to early flowering in B. rapa and B. napus and an increase in seed set where chilling is limited. Because PHP is known to specifically target the FLOWERING LOCUS C (FLC) gene in Arabidopsis, we propose that variation at PHP is useful for breeding modifications to chilling responses in polyploid crops with multiple copies of the FLC gene. [ABSTRACT FROM AUTHOR]
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- 2024
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3. CmbHLH110, a novel bHLH transcription factor, accelerates flowering in chrysanthemum.
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Yaoyao Huang, Xiaojuan Xing, Jinyu Jin, Yun Tang, Lian Ding, Aiping Song, Sumei Chen, Fadi Chen, Jiafu Jiang, and Weimin Fang
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TRANSCRIPTION factors , *CHRYSANTHEMUMS , *PLANT diseases , *PLANT development , *TRANSCRIPTOMES - Abstract
Basic helixeloopehelix (bHLH) transcription factor gene family in plants controls various growth and development aspects; however, the actual roles of these genes in flowering plants are not well known. In this study, a novel bHLH protein CmbHLH110 was found to interact with CmERF110 by in vitro and in vivo experiments, a chrysanthemum ERF110 homolog that acts as a positive flowering regulator. In addition, CmbHLH110 was also found to regulate the flowering of chrysanthemums, overexpression of CmbHLH110 causes chrysanthemums to flower earlier, and suppressed CmbHLH110 leads to delayed flowering. Furthermore, the loss-of-function Arabidopsis mutant of its homologue PERICYCLE FACTOR TYPE-A 5 (PFA5) had a noticeable late flowering phenotype, and CmbHLH110 completely complemented the late flowering phenotype of the pfa5 mutant, whereas heterologous overexpression of CmbHLH110 in Arabidopsis Col-0 caused early flowering. Transcriptome sequencing revealed significant differential expression of flowering-related and circadian clock-related genes in transgenic chrysanthemum. Therefore, we concluded that CmbHLH110, as a novel flowering regulator, could interact with CmERF110 to regulate flowering in chrysanthemum. [ABSTRACT FROM AUTHOR]
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- 2024
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4. Impacts of climate change on the transcriptional dynamics and timing of bud dormancy release in Yoshino‐cherry tree.
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Miyawaki‐Kuwakado, Atsuko, Han, Qingmin, Kitamura, Keiko, and Satake, Akiko
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GLOBAL warming , *CHERRIES , *GENE expression profiling , *GENE expression , *SPRING , *DORMANCY in plants - Abstract
Societal Impact Statement: The iconic Yoshino cherry tree in Japan is experiencing shifts in its blossom timing due to climate warming. To develop a genetically informed predictive model for bud dormancy release, we examined seasonal gene expression in Yoshino cherry trees at three different locations. Our experiments, coupled with the analysis of DORMANCY‐ASSOCIATED MADS‐box (DAM) genes, highlighted DAM4 as the most reliable indicator for the rate of bud dormancy release. Our study demonstrated that seasonal gene expression profiles serve as a valuable indicator for forecasting the timing of dormancy release, benefiting Japanese traditions and providing insights into the biological impacts of climate change. Summary: The Yoshino cherry tree Cerasus × yedoensis 'Somei‐yoshino' stands out as an iconic springtime symbol in Japan. For the Yoshino cherry trees to bloom in the spring, dormant buds must undergo a period of exposure to low temperatures, allowing them to break dormancy. Key genes related to dormancy release, known as DORMANCY‐ASSOCIATED MADS‐box (DAM), have been extensively studied. However, it remains unclear how these genes function in natural environments to regulate the timing of bud dormancy release.To develop a genetically informed predictive model for bud dormancy release, we explored seasonal changes in genome‐wide gene expression profiles in the Yoshino cherry trees at three distinct sites in Japan. Five distinct genome‐wide transcription profiles, subjectively named as modes—early summer, summer, autumn, winter, and spring—were identified, with the winter and spring modes observed when the daily mean temperature was below approximately 10°C.Our experiments of bud dormancy release, along with the assessment of expression profiles of DAM genes, have revealed that among the six DAM genes, DAM4 expression profile is the most indicative of the rate of bud dormancy break. Our estimates suggest that, on average, the tree needs to be exposed to temperatures below 10.1°C for 61.1 days to suppress DAM4 expression to the threshold required for bud dormancy release.Our projections for the timing of bud dormancy release indicated a delay of approximately 2.3 days per decade from 1990 to 2020. Our study demonstrated that gene expression serves as a valuable indicator for forecasting the timing of dormancy release. [ABSTRACT FROM AUTHOR]
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- 2024
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5. Genome-wide association study revealed some new candidate genes associated with flowering and maturity time of soybean in Central and West Siberian regions of Russia.
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Perfil'ev, Roman, Shcherban, Andrey, Potapov, Dmitriy, Maksimenko, Konstantin, Kiryukhin, Sergey, Gurinovich, Sergey, Panarina, Veronika, Polyudina, Revmira, and Salina, Elena
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GENOME-wide association studies ,AGRICULTURE ,FLOWERING time ,GENETIC code ,FIELD research - Abstract
The duration of flowering and maturity is an important agricultural trait determining the suitability of a variety for cultivation in the target region. In the present study, we used genome-wide association analysis (GWAS) to search for loci associated with soybean flowering and maturity in the Central and West Siberian regions of Russia. A field experiment was conducted in 2021/2022 at two locations (Orel and Novosibirsk). A germplasm collection of 180 accessions was genotyped using SoySNP50K Illumina Infinium Bead-Chip. From the initial collection, we selected 129 unrelated accessions and conducted GWAS on this dataset using two multi-locus models: FarmCPU and BLINK. As a result, we identified 13 loci previously reported to be associated with duration of soybean development, and 17 new loci. 33 candidate genes were detected in these loci using analysis of co-expression, gene ontology, and literature data, with the best candidates being Glyma.03G177500, Glyma.13G177400, and Glyma.06G213100. These candidate genes code the Arabidopis orthologs TOE1 (TARGET OF EAT 1), SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN LIKE 3), the DELLA protein, respectively. In these three genes, we found haplotypes which may be associated with the length of soybean flowering and maturity, providing soybean adaptation to a northern latitudes. [ABSTRACT FROM AUTHOR]
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- 2024
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6. A pair of E3 ubiquitin ligases control immunity and flowering by targeting different ELF3 proteins in rice.
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Xu, Xiao, Shi, Xuetao, You, Xiaoman, Hao, Zeyun, Wang, Ruyi, Wang, Min, He, Feng, Peng, Shasha, Tao, Hui, Liu, Zheng, Wang, Jisong, Zhang, Chongyang, Feng, Qin, Wu, Weixun, Wang, Guo-Liang, and Ning, Yuese
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RICE blast disease , *PYRICULARIA oryzae , *PROTEOLYSIS , *LIGASES , *PLANT growth - Abstract
The ubiquitin-proteasome system (UPS) plays crucial roles in cellular processes including plant growth, development, and stress responses. In this study, we report that a pair of E3 ubiquitin ligases, AvrPiz-t-interaction protein 6 (APIP6) and IPA1-interaction protein 1 (IPI1), intricately target early flowering3 (ELF3) paralogous proteins to control rice immunity and flowering. APIP6 forms homo-oligomers or hetero-oligomers with IPI1. Both proteins interact with OsELF3-2, promoting its degradation to positively control resistance against the rice blast fungus (Magnaporthe oryzae). Intriguingly, overexpression of IPI1 in Nipponbare caused significantly late-flowering phenotypes similar to the oself3-1 mutant. Except for late flowering, oself3-1 enhances resistance against M. oryzae. IPI1 also interacts with and promotes the degradation of OsELF3-1, a paralog of OsELF3-2. Notably, IPI1 and APIP6 synergistically modulate OsELF3s degradation, finely tuning blast disease resistance by targeting OsELF3-2, while IPI1 controls both disease resistance and flowering by targeting OsELF3-1. This study unravels multiple functions for a pair of E3 ligases in rice. [Display omitted] • APIP6 forms homo-oligomers with itself and hetero-oligomers with IPI1 • Both APIP6 and IPI1 promote OsELF3-2 degradation to enhance rice immunity • IPI1 targets OsELF3-1 to enhance immunity but negatively controls flowering • APIP6/IPI1 hetero-oligomers facilitate the degradation of ELF3 proteins in rice The pair of E3 ubiquitin ligases, APIP6 and IPI1, positively control rice immunity by promoting the degradation of OsELF3-2, while IPI1 delays flowering by destabilizing OsELF3-1. By forming hetero-oligomers, APIP6 and IPI1 synergistically control ELF3-mediated development and immunity in rice. [ABSTRACT FROM AUTHOR]
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- 2024
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7. Reinterpreting olive bud dormancy.
- Author
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Arias-Sibillotte, Mercedes, Considine, Michael J, and Signorelli, Santiago
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SCIENTIFIC ability , *BUDS , *DECIDUOUS plants , *PHYSIOLOGY , *TROPICAL fruit , *OLIVE - Abstract
This article, published in the Journal of Experimental Botany, reinterprets the concept of olive bud dormancy. The authors argue that olive buds do not undergo true physiological dormancy, but rather go through a process of para-dormancy and eco-dormancy. They discuss the challenges of studying bud dormancy in olive trees, which are evergreen and have different growth patterns compared to deciduous trees. The article also explores the relationship between cold temperatures and flowering in olive trees, highlighting the role of the FT gene in promoting flower induction. Overall, the authors suggest that further research is needed to better understand the reproductive biology of olive trees and improve olive production. [Extracted from the article]
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- 2024
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8. Beyond floral initiation: the role of flower bud dormancy in flowering time control of annual plants.
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Penfield, Steven
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FLOWERING time , *ANNUALS (Plants) , *AUTUMN , *VERNALIZATION , *BUDS - Abstract
The phenology of temperate perennials, including the timing of vegetative growth and flowering, is well known to be controlled by seasonal dormancy cycles. Dormant structures are known as buds and have specialized covering structures, symplastic isolation from the plant, and often autonomous stores of carbon and nitrogen reserves. In contrast, in annual plants, our current understanding of the control of the timing of flowering focuses on the mechanisms affecting floral initiation, the transition from a vegetative apical meristem to a inflorescence meristem producing flower primordia in place of leaves. Recently we revealed that annual crops in Brassicaceae exhibit chilling-responsive growth control in a manner closely resembling bud dormancy breakage in perennial species. Here I discuss evidence that vernalization in autumn is widespread and further discuss its role in inducing flower bud set prior to winter. I also review evidence that flower bud dormancy has a more widespread role in annual plant flowering time control than previously appreciated. [ABSTRACT FROM AUTHOR]
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- 2024
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9. Wheat TaTIFY3B and TaTIFY10A play roles in seed germination and abiotic stress responses in transgenic Arabidopsis and rice.
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Liu, Hanxi, Yao, Yaxin, Ma, Jiayang, Wang, Shaoyu, Li, Song, Wang, Weiwei, Yu, Xinmiao, Sun, Fengli, Zhang, Chao, and Xi, Yajun
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PLANT life cycles , *WHEAT seeds , *TRANSGENIC rice , *TRANSGENIC plants , *JASMONIC acid , *GERMINATION - Abstract
Background: Seed germination is a key process in the plant life cycle that affects the vegetative and reproductive stages of plants. Although the JAZ gene family has been characterized in many plants, the relationship between the JAZ gene and seed germination is still unclear. Results: We identified two members of the JAZ family from wheat, TaTIFY3B and TaTIFY10A. TaTIFY3B and TaTIFY10A were localized in both the cell membrane and nucleus. Spatio-temporal expression analysis of TaTIFY3B and TaTIFY10A in wheat revealed that these genes are essential for the preharvest sprouting (PHS) stage of seed development, with expression levels significantly decreasing during the ripening period. Transgenic rice plants overexpressing wheat TaTIFY3B and TaTIFY10A improved seed germination rates. Transgenic Arabidopsis plants overexpressing wheat TaTIFY10A improved seed germination rates and promoted flowering. In addition, abscisic acid (ABA) and jasmonic acid (JA) were found to induce TaTIFY3B and TaTIFY10A expression. Under different ABA concentrations, the seed germination rates of transgenic rice and Arabidopsis overexpressing TaTIFY3B and TaTIFY10A are superior to wild-type (WT) and mutant plants, and the root lengths of Arabidopsis overexpressing TaTIFY3B and TaTIFY10A also change. Under different JA concentrations, there is no difference in the seed germination rate of rice overexpressing TaTIFY3B and TaTIFY10A compared to WT and mutant plants, but there is a significant difference in the seed germination rate and root length of overexpressing Arabidopsis compared to WT and mutant plants. Under different concentrations of salt and drought treatments, the seed germination rate and root length of overexpressing Arabidopsis of TaTIFY3B and TaTIFY10A are affected. Conclusions: This study offers a novel perspective for understanding the molecular basis of pre-harvest sprouting and provides potential candidate genes for controlling wheat seed germination. [ABSTRACT FROM AUTHOR]
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- 2024
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10. A Plasma Membrane Intrinsic Protein Gene OfPIP2 Involved in Promoting Petal Expansion and Drought Resistance in Osmanthus fragrans.
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Lu, Xinke, Kong, En, Shen, Lixiao, Ye, Yong, Wang, Yiguang, Dong, Bin, and Zhong, Shiwei
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TRANSCRIPTION factors , *ORNAMENTAL plants , *DROUGHT tolerance , *CELL membranes , *MEMBRANE proteins - Abstract
Osmanthus fragrans, a native to China, is renowned as a highly popular gardening plant. However, this plant faces significant challenges from drought stress, which can adversely affect its flowering. In this study, we found that the plasma membrane-localized gene OfPIP2 exhibited a substantial upregulation during the flowering stages and in response to drought stress. GUS staining has illustrated that the OfPIP2 promoter can drive GUS activity under drought conditions. The overexpression of OfPIP2 was found to enhance petal size by modulating epidermal cell dimensions in Petunia and tobacco. Moreover, this overexpression also bolstered drought tolerance, as evidenced by a reduction in stomatal aperture in both species. Furthermore, yeast one-hybrid (Y1H) and dual-luciferase (Dual-LUC) assays have indicated that the transcription factor OfMYB28 directly binds to the OfPIP2 promoter, thereby regulating its expression. Together, we speculated that a module of OfMYB28-OfPIP2 was not only involved in the enhancement of petal size but also conferred the improvement of drought tolerance in O. fragrans. These results contribute valuable insights into the molecular function of the OfPIP2 gene and lay a foundation for molecular breeding strategies in O. fragrans. [ABSTRACT FROM AUTHOR]
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- 2024
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11. INDETERMINATE DOMAIN Transcription Factors in Crops: Plant Architecture, Disease Resistance, Stress Response, Flowering, and More.
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Kozaki, Akiko
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TRANSCRIPTION factors , *SEED development , *AGRICULTURE , *CROPS , *CARBON 4 photosynthesis - Abstract
INDETERMINATE DOMAIN (IDD) genes encode plant-specific transcription factors containing a conserved IDD domain with four zinc finger motifs. Previous studies on Arabidopsis IDDs (AtIDDs) have demonstrated that these genes play roles in diverse physiological and developmental processes, including plant architecture, seed and root development, flowering, stress responses, and hormone signaling. Recent studies have revealed important functions of IDDs from rice and maize, especially in regulating leaf differentiation, which is related to the evolution of C4 leaves from C3 leaves. Moreover, IDDs in crops are involved in the regulation of agriculturally important traits, including disease and stress resistance, seed development, and flowering. Thus, IDDs are valuable targets for breeding manipulation. This review explores the role of IDDs in plant development, environmental responses, and evolution, which provides idea for agricultural application. [ABSTRACT FROM AUTHOR]
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- 2024
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12. THYLAKOID FORMATION 1 interacts with FLOWERING LOCUS T and modulates temperature‐responsive flowering in Arabidopsis.
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Susila, Hendry, Gawarecka, Katarzyna, Youn, Geummin, Jurić, Snježana, Jeong, Hyewon, and Ahn, Ji Hoon
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SHOOT apexes , *CHLOROPLAST formation , *GENOME editing , *ARABIDOPSIS thaliana , *LOW temperatures , *CHLOROPLASTS - Abstract
SUMMARY: The intracellular localization of the florigen FLOWERING LOCUS T (FT) is important for its long‐distance transport toward the shoot apical meristem. However, the mechanisms regulating the FT localization remain poorly understood. Here, we discovered that in Arabidopsis thaliana, the chloroplast‐localized protein THYLAKOID FORMATION 1 (THF1) physically interacts with FT, sequestering FT in the outer chloroplast envelope. Loss of THF1 function led to temperature‐insensitive flowering, resulting in early flowering, especially under low ambient temperatures. THF1 mainly acts in the leaf vasculature and shoot apex to prevent flowering. Mutation of CONSTANS or FT completely suppressed the early flowering of thf1‐1 mutants. FT and THF1 interact via their anion binding pocket and coiled‐coil domain (CCD), respectively. Deletion of the CCD in THF1 by gene editing caused temperature‐insensitive early flowering similar to that observed in the thf1‐1 mutant. FT levels in the outer chloroplast envelope decreased in the thf1‐1 mutant, suggesting that THF1 is important for sequestering FT. Furthermore, THF1 protein levels decreased in seedlings grown at high ambient temperature, suggesting an explanation for its role in plant responses to ambient temperature. A thf1‐1 phosphatidylglycerolphosphate synthase 1 (pgp1) double mutant exhibited additive acceleration of flowering at 23 and 16°C, compared to the single mutants, indicating that THF1 and phosphatidylglycerol (PG) act as independent but synergistic regulators of temperature‐responsive flowering. Collectively, our results provide an understanding of the genetic pathway involving THF1 and its role in temperature‐responsive flowering and reveal a previously unappreciated additive interplay between THF1 and PG in temperature‐responsive flowering. Significance Statement: In this study, the interaction between Arabidopsis florigen FLOWERING LOCUS T (FT) and the chloroplast‐localized protein THYLAKOID FORMATION 1 (THF1) is unveiled. THF1 sequesters FT within the chloroplast envelope, particularly under low ambient temperature conditions, modulating temperature‐responsive flowering in Arabidopsis. [ABSTRACT FROM AUTHOR]
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- 2024
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13. Analysis of flower phenology, flowering and stigma performance of saffron as a result of indirect treatment with DBD surface plasma under salt stress.
- Author
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Khalilzadeh, Razieh, Khalilzadeh, Elnaz, Dehghani, Zohreh, Pirzad, Alireza, Abdollahi, Mahnaz, Abdollahi, Nayereh, and Beigmohammadi, Narges
- Subjects
SAFFRON crocus ,LOW temperature plasmas ,CLIMATE change ,GERMINATION ,COLORIMETRY - Abstract
Saffron (Crocus sativus L.) is cultivated in environments with very different climatic conditions and with very different corm rates from place to place, and it is appreciated for its red dried stigmas used as cooking spice and flavoring agent. To enhance the flower morphological and colorimetric traits under environmental stresses, the applications of non-thermal plasma based techniques are increasingly being investigated in the field of agricultural science as an alternative to conventional pre-germination treatments. Therefore, a field study was conducted to compare four levels P1 (no treatment), P2 (5 minute treatment), P3 (10 minute treatment), P4 (20 minute) and the salinity stress factors in three levels were 2, 4 and 6 dS.m
-1 according a factorial design with 3 replications. Flowering beginning in saffron seems to be influenced by the combination of plasma and salinity stress. High concentration of salinity (6 dS.m-1 ) resulted in a lower flower and stigma production. The highest number of leaf per plant was found when corms treated to P4 and 2 dS.m-1 6 salinity stress condition. Exposure of saffron corn to plasma treatments of 20 minutes showed the most stimulating effect regarding the flower phenology and stigmas yield in saffron under salinity stress. [ABSTRACT FROM AUTHOR]- Published
- 2024
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14. A review on exploring the efficiency of plant hormones on fruitfulness of perishables.
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Ashtalakshmi, M., Saraswathy, S., Muthulakshmi, S., Venkatesan, K., and Anitha, T.
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POSTHARVEST diseases ,TROPICAL fruit ,FRUIT development ,PERISHABLE goods ,PLANT regulators ,PLANT growth ,PLANT development ,PLANT hormones - Abstract
Phytohormones promote growth in the vegetative phase, flowering and fruit development. A novel class of PGR comprises brassinosteroids (BRs) and polyamines (PAs). In fruit crops, fruit drop at the maturity stage is controlled by the external application of BRs and PAs. BRs such as brassinolide, 24-epibrassinolide and 28-homobrassinolide and PAs such as putrescine, spermidine and spermine play significant roles in plant growth and development. Brassinolide provides tolerance against biotic and abiotic stresses. 24-Epibrassinolide promotes blossoming, fruit retention, fruit set and fruit growth. 28-homobrassinolide promotes cell division and cell elongation. Putrescine enhances seed germination and adventitious root formation in seedlings. Moreover, spermidine provides tolerance against drought and salinity. Furthermore, spermine promotes flowering and fruiting and competes with ethylene precursors. It would be beneficial to apply plant growth regulators such as BRs and PAs to increase fruit yield and quality. This review discusses how phytohormone (BR and PA) application can improve the productivity, quality, physiological, biochemical and postharvest aspects of some tropical, subtropical and temperate fruits and focuses on research areas such as the mode of action and stage of application of BRs and PAs which enhance the yield and quality of these perishable fruit crops. Article highlights: The newly emerged plant growth hormones brassinosteroids and polyamines are vital PGRs for the cultivation of horticulture commodities. BRs and PAs are environmentally safe phytohormones that improve the yield and quality of fruits. These materials are effectively utilized in both fruit production and postharvest management. [ABSTRACT FROM AUTHOR]
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- 2024
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15. Ectopic Overexpression of Domestication-Driven Cytoskeletal Profilin (GhPRF1) Gene Improves Flowering and Trichome Development in Cotton (Gossypium hirsutum L.).
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Pandey, Dhananjay K. and Chaudhary, Bhupendra
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CROP yields ,COTTON fibers ,NATURAL fibers ,GENETIC transformation ,GENE families ,PLANT genetic transformation ,SOMATIC embryogenesis - Abstract
Cotton, as a natural fiber crop, plays a pivotal role in advancing global textile industry. Comparative transcriptome analyses of single-cell 'fiber' from wild and domesticated plant revealed the evolutionary selection of cell wall-associated profilin gene family during cotton domestication. However, the evolutionary significance of elevated transcript abundance of profilins (GhPRFs) in floral and fiber tissues, and their practical application in the field for improving crop yield remain poorly understood. In this study, the domestication-driven 402 bp long GhPRF1 gene (Pro35Sde:GhPRF1-pA) was constitutively overexpressed in cotton (Gossypium hirsutum L. cv. Coker 310FR) through Agrobacterium-mediated genetic transformation of 1513 cotyledonary explants undergoing somatic embryogenesis. Out of the 32 putative GhPRF1 transgenic overexpression (Ox) lines produced, 26 lines were successfully confirmed with independent transgene integrations. Compared with those of the untransformed wild type (WT), the cumulative abundance of GhPRF1 transcripts in the leaf tissues of GhPRF1 overexpressing lines Pf-CaOx7, Pf-CaOx14, and Pf-CaOx19 substantially increased (> 12-fold). These transgenic lines exhibited increased numbers of secondary branches, flower buds per branch, and trichome density on the abaxial surface of leaves compared to the WT plants. Despite comparable fiber lengths between the overexpression lines and the WT, the enhanced fiber yields in the overexpression lines were attributed to increased flower number and boll production per branch. Remarkably, GhPRF1 overexpression also manifested transcriptional biases specific to profilin homologs in vegetative, floral, and fiber tissues. This is primarily attributed to increased actin polymerization and the formation of dense F-actin bundles, which are especially evident in the vascular regions of overexpression lines compared to those of the WT. This study revealed novel phenotypic and genetic foundations influencing floral and fiber architecture in cotton and offers promising avenues for manipulating agronomic traits. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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16. Assessing the Role of At GRP7 Arginine 141, a Target of Dimethylation by PRMT5, in Flowering Time Control and Stress Response.
- Author
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Steffen, Alexander, Dombert, Katarzyna, Iglesias, María José, Nolte, Christine, de Leone, María José, Yanovsky, Marcelo J., Mateos, Julieta L., and Staiger, Dorothee
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PROTEIN arginine methyltransferases ,RNA-binding proteins ,FLOWERING time ,PROTEIN overexpression ,GENETIC regulation - Abstract
PROTEIN ARGININE METHYLTRANSFERASES (PRMTs) catalyze arginine (R) methylation that is critical for transcriptional and post-transcriptional gene regulation. In Arabidopsis, PRMT5 that catalyzes symmetric R dimethylation is best characterized. PRMT5 mutants are late-flowering and show altered responses to environmental stress. Among PRMT5 targets are Arabidopsis thaliana GLYCINE RICH RNA BINDING PROTEIN 7 (AtGRP7) and AtGRP8 that promote the transition to flowering. AtGRP7 R141 has been shown to be modified by PRMT5. Here, we tested whether this symmetric dimethylation of R141 is important for AtGRP7's physiological role in flowering time control. We constructed AtGRP7 mutant variants with non-methylable R141 (R141A, R141K). Genomic clones containing these variants complemented the late-flowering phenotype of the grp7-1 mutant to the same extent as wild-type AtGRP7. Furthermore, overexpression of AtGRP7 R141A or R141K promoted flowering similar to overexpression of the wild-type protein. Thus, flowering time does not depend on R141 and its modification. However, germination experiments showed that R141 contributes to the activity of AtGRP7 in response to abiotic stress reactions mediated by abscisic acid during early development. Immunoprecipitation of AtGRP7-GFP in the prmt5 background revealed that antibodies against dimethylated arginine still recognized AtGRP7, suggesting that additional methyltransferases may be responsible for modification of AtGRP7. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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17. Daily Light Integral and Far-Red Radiation Influence Morphology and Quality of Liners and Subsequent Flowering and Development of Petunia in Controlled Greenhouses.
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Xia, Jiaqi and Mattson, Neil
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FLORAL morphology ,FLOWER development ,CROP quality ,BEDDING plants ,SPRING - Abstract
Petunia stands as the top-selling bedding plant in the U.S., and improved lighting control in greenhouses holds the potential to reduce crop production time and optimize crop quality. This study investigated the impact of four distinct daily light integral (DLI) conditions with and without supplemental far-red (FR) radiation on the growth of petunia liners and subsequent development of finish plants. Two experiments were conducted in spring (9 April to 18 June 2021) and winter (28 October 2021 to 6 January 2022). Petunia cuttings were rooted in a common environment and then transferred to four greenhouse sections with different DLI treatments: 6, 9, 12, and 15 mol·m
−2 ·d−1 for four weeks. Within each DLI condition, half of the plants were exposed to 28 μmol·m−2 ·s−1 supplemental FR radiation for 16 h daily (equivalent to 1.61 mol·m−2 ·d−1 light integral). The number of flower buds and open flowers were tracked daily. Representative liners were destructively harvested and evaluated after four weeks of lighting treatments. The remaining plants were transplanted and moved to a common DLI condition of 15 mol·m−2 ·d−1 for an additional three weeks before being destructively harvested and evaluated as finish plants. The primary finding reveals the promoting effect of DLI on flowering, branching, morphology, and biomass accumulation of petunia liners, with many effects persisting into the finish stage. A threshold DLI of 9 mol·m−2 ·d−1 was identified, as lower DLI (6 mol·m−2 ·d−1 ) resulted in extensive stem elongation, rendering the plants unmarketable. Higher DLI levels were found to be optimal in terms of flowering and morphology. Supplemental FR accelerated flowering by up to three days in the summer experiment and up to 12 days in the winter experiment. However, FR had limited impact on the number of flower buds and open flowers, branching, and shoot and root weight of the finish plants. Interactions between DLI and FR were observed on some parameters, whereby FR effects were more pronounced under lower DLI. Overall, both higher DLI and supplemental FR exhibited beneficial effects, but DLI had a more pronounced effect. Thus, DLI during petunia liner production appears more important than adding FR. This study well simulated the commercial propagation and production of petunia plants, providing practical insights for decision-making regarding lighting strategies. [ABSTRACT FROM AUTHOR]- Published
- 2024
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18. Genome-Wide Identification and Expression Analysis of the MADS-Box Gene Family in Cassava (Manihot esculenta).
- Author
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Zhang, Qin, Li, Yanan, Geng, Sha, Liu, Qian, Zhou, Yingchun, Shen, Shaobin, Shen, Zhengsong, Ma, Dongxiao, Xiao, Mingkun, Luo, Xin, Che, Bin, Li, Kang, and Yan, Wei
- Subjects
GENE expression ,GENE families ,GENE regulatory networks ,ABSCISIC acid ,CELLULAR signal transduction ,CASSAVA - Abstract
The MADS-box gene family constitutes a vital group of transcription factors that play significant roles in regulating plant growth, development, and signal transduction processes. However, research on the MADS-box genes in cassava (Manihot esculenta) has been relatively limited. To gain deeper insights into the functions of the MADS-box genes in cassava development, in this study, we undertook a comprehensive genome-wide identification of the MADS-box gene family in cassava. We identified a total of 86 MADS-box genes with complete domains in the cassava genome, designated as MeMADS01 to MeMADS86. Through bioinformatic analyses, we investigated the basic physicochemical properties, conserved motifs, chromosomal locations, and phylogenetic relationships of the cassava MADS-box genes. The MADS-box gene family of cassava exhibited conservation, as well as species-specific characteristics, with intron loss being a predominant mode of evolution for the MADS-box genes. Expression pattern variations in the MeMADS genes across different tissues offer insights into their potential functions. Time-ordered gene co-expression network (TO-GCN), transcriptome data, and RT-qPCR analysis suggested the responsiveness of the MADS-box genes to drought stress. Meanwhile, MeMADS12 might be involved in regulating flowering under drought conditions via an ABA (abscisic acid)-dependent pathway. These findings provide valuable resources for a deeper understanding of the biological roles of the MADS-box genes in cassava. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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19. TiO2 NPs as a Promising Strategy for Crop Conservation Resulting from Deficit Irrigation in <italic>Fragaria</italic> × <italic>ananassa</italic> Cv. Camarosa.
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Javan, Mostafa, Ameri, Atefe, Selahvarzi, Yahya, and Sayyad-Amin, Pegah
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DEFICIT irrigation , *TITANIUM dioxide nanoparticles , *WATER efficiency , *BEHAVIORAL assessment , *FACTORIAL experiment designs - Abstract
Nanoparticle-based methods can compensate for yield and quality loss of crops affected by drought. The current study, performed in a factorial experiment based on a completely randomized design, addressed to evaluate the effect of titanium dioxide nanoparticles (TiO2 NPs) at 0, 10, 20, and 30 mg L−1 under three irrigation regimes (full irrigation, partial root drying (PRD), and sustained deficit irrigation (SDI)) on
Fragaria ×ananassa cv. Camarosa. Results revealed that the PRD stress had more adverse effects onF. ananassa cv. Camarosa than SDI stress. Assessment of the behavior of TiO2 NPs in this study elucidated that mean productivity, yield stability index, and fruit number in plants grown under full irrigation increased when treated with 10 mg L−1 TiO2 NPs. Under the deficit irrigation, including PRD and SDI, all levels of TiO2 NPs mitigated mean productivity and yield stability index by ameliorating the fruit number and water use efficiency (WUE) and decreasing transpiration. Flowering and fruit set times were reduced by TiO2 NPs and deficit irrigation while their periods were enhanced by ones. It seems that when the strawberry was exposed to TiO2 NPs exhibited approximately drought tolerance. These nanoparticles ameliorated photosynthesis and mineral uptake and allocated dry matter to the root. These alterations can contribute to crop production in deficit irrigation strategies. [ABSTRACT FROM AUTHOR]- Published
- 2024
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20. Functional characterization of Arabidopsis hydroxynitrile lyase in response to abiotic stress and the regulation of flowering time.
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Xue, Lei, Bu, Duo, Fu, Jiangyan, Zhou, Zhe, Gao, Meng, Wang, Ren, and Xu, Sheng
- Abstract
Background: Hydroxynitrile lyases (HNLs) are a class of hydrolytic enzymes from a wide range of sources, which play crucial roles in the catalysis of the reversible conversion of carbonyl compounds derived from cyanide and free cyanide in cyanogenic plant species. HNLs were also discovered in non-cyanogenic plants, such as Arabidopsis thaliana, and their roles remain unclear even during plant growth and reproduction. Methods and results: The pattern of expression of the HNL in A. thaliana (AtHNL) in different tissues, as well as under abiotic stresses and hormone treatments, was examined by real-time quantitative reverse transcription PCR (qRT-PCR) and an AtHNL promoter-driven histochemical β-glucuronidase (GUS) assay. AtHNL is highly expressed in flowers and siliques, and the expression of AtHNL was dramatically affected by abiotic stresses and hormone treatments. The overexpression of AtHNL resulted in transgenic A. thaliana seedlings that were more tolerance to mannitol and salinity. Moreover, transgenic lines of A. thaliana that overexpressed this gene were less sensitive to abscisic acid (ABA). Altered expression of ABA/stress responsive genes was also observed in hnl mutant and AtHNL-overexpressing plants, suggesting AtHNL may play functional roles on regulating Arabidopsis resistance to ABA and abiotic stresses by affecting ABA/stress responsive gene expression. In addition, the overexpression of AtHNL resulted in earlier flowering, whereas the AtHNL mutant flowered later than the wild type (WT) plants. The expression of the floral stimulators CONSTANS (CO), SUPPRESSOR OF OVER EXPRESSION OF CO 1 (SOC1) and FLOWERING LOCUS T (FT) was upregulated in plants that overexpressed AtHNL when compared with the WT plants. In contrast, expression of the floral repressor FLOWERING LOCUS C (FLC) was upregulated in AtHNL mutants and downregulated in plants that overexpressed AtHNL compared to the WT plants. Conclusion: This study revealed that AtHNL can be induced under abiotic stresses and ABA treatment, and genetic analysis showed that AtHNL could also act as a positive regulator of abiotic stress and ABA tolerance, as well as flowering time. [ABSTRACT FROM AUTHOR]
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- 2024
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21. The role of FIONA1 in alternative splicing and its effects on flowering regulation in Arabidopsis thaliana.
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Miyokawa, Ryo and Sasaki, Eriko
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- *
RNA modification & restriction , *ALTERNATIVE RNA splicing , *GENE expression , *GENETIC variation , *GENE expression profiling , *RNA splicing , *FLOWERING time - Abstract
This article examines the role of FIO1, an RNA methyltransferase, in alternative splicing and its impact on flowering regulation in Arabidopsis thaliana. The authors analyze previous studies and find that differences in conclusions may be due to variations in experimental conditions and data analysis methods. They also compare different tools for detecting differential splicing and find that exon-based tools have higher recall rates, while event-based tools have higher precision rates. The study provides insights into the molecular functions of FIO1 and emphasizes the importance of considering experimental conditions and data analysis in research. Additionally, the article explores the potential influence of FIO1 on flowering time but acknowledges the need for further research to fully understand its mechanisms and environmental adaptation. [Extracted from the article]
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- 2024
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22. Dynamics of apex and leaf development in barley as affected by PPD-H1 alleles in two contrasting PHYC backgrounds under short or long photoperiod.
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Parrado, Jorge D., Savin, Roxana, and Slafer, Gustavo A.
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FLOWERING time ,LEAF development ,BARLEY ,GRAIN yields ,PHENOLOGY - Abstract
Barley development from seedling to flowering involves both external and internal changes, the latter requiring microscopic observation. Internal changes allow for the classification of preflowering development into three phases: vegetative, early reproductive, and late reproductive. Genetic and environmental factors influence the duration of these phases, impacting grain yield. Photoperiod-sensitivity genes PPD-H1 play amajor role in flowering time, affecting adaptation; however, the effect might also be direct (beyond affecting phenology). In this paper, we aimed to assess how PPD-H1 alleles affect barley development, including the progression of growth phases, leaf emergence, tillering dynamics, and spikelet development. Two experiments (field and controlled conditions) were conducted with a factorial combination of (i) four near-isogenic lines (NILs) for PPD-H1 alleles (ppd-H1 or Ppd-H1) under two contrasting PHYC genetic backgrounds (PhyC-l and PhyC-e) and (ii) two photoperiod conditions (short and long days). As expected, longer photoperiods led to a shorter growth cycle. All subphases of time to flowering, final leaf number, and phyllochron were affected by photoperiod. The effects of PPD-H1 on flowering time depended on the PHYC genetic backgrounds and photoperiod conditions. PPD-H1 effects on flowering time were associated with leaf number and phyllochron; the interplay between leaf number and phyllochron affected mainly the late reproductive phase. We also found that although PPD-H1 did not affect the phyllochron of the first six leaves, the phyllochron of leaves appearing later, when grown under a short photoperiod, was consistently increased in lines carrying the ppd-H1 allele. Tillering dynamics exhibited variability, but PPD-H1 did not affect the final spike number under a 24-h photoperiod. [ABSTRACT FROM AUTHOR]
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- 2024
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23. ZmARF16 Regulates ZCN12 to Promote the Accumulation of Florigen and Accelerate Flowering.
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Jiang, Zhenzhong, Zhao, Yang, Gao, Bai, Wei, Xiaotong, Jiao, Peng, Zhang, Honglin, Liu, Siyan, Guan, Shuyan, and Ma, Yiyong
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- *
GENE expression , *GENETIC transformation , *GENETIC transcription , *PLANT growth , *PLANT development - Abstract
Auxin response factors(ARFs) are a class of transcription factors that regulate the expression of auxin response genes and play a crucial role in plant growth and development. Florigen plays a crucial role in the process of flowering. However, the process by which auxin regulates the accumulation of florigen remains largely unclear. This study found that the expression of ZmARF16 in maize increases during flowering, and the genetic transformation of ZmARF16 accelerates the flowering process in Arabidopsis and maize. Furthermore, ZmARF16 was found to be positively correlated with the transcription of the ZCN12 gene. Similarly, the FT-like gene ZCN12 in maize rescues the late flowering phenotype of the FT mutation in Arabidopsis. Moreover, ZCN12 actively participates in the accumulation of florigen and the flowering process. Further research revealed that ZmARF16 positively responds to the auxin signal, and that the interaction between ZmARF16 and the ZCN12 promoter, as well as the subsequent promotion of ZCN12 gene expression, leads to early flowering. This was confirmed through a yeast one-hybrid and dual-luciferase assay. Therefore, the study provides evidence that the ZmARF16-ZCN12 module plays a crucial role in regulating the flowering process of maize. [ABSTRACT FROM AUTHOR]
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- 2024
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24. Quantifying Temperature Effects on Plant Development Rates and Quality of Compact Container-grown Pepper.
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Dickson, Ryan W., Padhye, Sonali, Machesney, Leala M., and Tebow, Josh
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PLANT development , *FARMERS , *TEMPERATURE effect , *CROP quality , *EXPONENTIAL functions - Abstract
The mean daily temperature effects on plant development rates and quality of compact container-grown pepper were evaluated. Compact pepper cultivars Fresh Bites Yellow and Hot Burrito were grown in greenhouses at 18 to 26 °C (Expt. 1) and 20 to 30 °C (Expt. 2) under supplemental high-pressure sodium lighting and a 16-hour photoperiod. The number of days to first open flower, to first ripe fruit, and from flower to ripe fruit were measured and the development rates calculated by taking the reciprocal (e.g., 1/day). Temperature effects were predicted by fitting a nonlinear exponential function that included the base temperature (Tmin) and maximum developmental rate (Rmax) parameters. Plant quality attributes were measured during Expt. 2. As the temperature increased, the times to flower and fruit decreased (i.e., developmental rates increased) for both cultivars. The estimated Tmin was 13.3 °C for 'Fresh Bites Yellow', and that for 'Hot Burrito' was 9.3 °C, whereas the Rmax was similar between cultivars (averages of 0.0488 at flower, 0.0190 at fruit, and 0.0252 from flower to fruit). 'Fresh Bites Yellow' and 'Hot Burrito' grown at ≈25 °C had a relatively short crop time, compact canopy, large fruit size, and high number of fruits per plant at finish. Compact peppers are new crops being grown by greenhouse floriculture operations for their ornamental and edible value, and the information from this study can help growers schedule these crops to meet critical market windows and determine the impacts of changing the growing temperature on crop timing and quality. [ABSTRACT FROM AUTHOR]
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- 2024
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25. Studies on pollen performance in some endangered medicinal and aromatic plants of cold desert Ladakh.
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Lamo, Kunzang, Gurmet, Padma, and Rinchen, Tsewang
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POLLEN viability ,PLANT conservation ,PALYNOLOGY ,AROMATIC plants ,FLOWERING of plants ,POLLINATION - Abstract
The study was carried out at the Trans-Himalayan Herbal Garden, located at the National Institute of Sowa Rigpa-Leh, from 2021 to 2023. An assessment of pollen viability was conducted using seven significant medicinal and aromatic plants from the Ladakh region. Analysis of pollen vitality was conducted using the acetocarmine staining technique. The pollen viability of Inula racemosa Hook. f. ranged from 91.08 ± 1.39 % to 82.44 ± 1.48 % in Ephedra gerardiana Wall. Among the genus Inula racemosa, the highest percentage (91.08%) of viable pollens indicates a normal meiosis, whereas Ephedra gerardiana recorded the lowest percentage. Among the chosen species, Inula racemosa, Verbascumthapsus, Hyoscyamus niger, and Dracocephalum heterophyllum stand out for their exceptional pollen viability. These species can be effectively utilized for conservation purposes and as male parents in hybridization. The result for the average pollen density varied from 1533.07 ± 106.32 in Capparis spinosa L. to 276.00 ± 10.20 in Dracocephalum heterophyllum. [ABSTRACT FROM AUTHOR]
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- 2024
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26. Impacts of climate change on the transcriptional dynamics and timing of bud dormancy release in Yoshino‐cherry tree
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Atsuko Miyawaki‐Kuwakado, Qingmin Han, Keiko Kitamura, and Akiko Satake
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Cerasus × yedoensis ‘Somei‐yoshino’ ,climate change ,dormancy release ,DORMANCY‐ASSOCIATED MADS‐box (DAM) genes ,flowering ,forecasting ,Environmental sciences ,GE1-350 ,Botany ,QK1-989 - Abstract
Societal Impact Statement The iconic Yoshino cherry tree in Japan is experiencing shifts in its blossom timing due to climate warming. To develop a genetically informed predictive model for bud dormancy release, we examined seasonal gene expression in Yoshino cherry trees at three different locations. Our experiments, coupled with the analysis of DORMANCY‐ASSOCIATED MADS‐box (DAM) genes, highlighted DAM4 as the most reliable indicator for the rate of bud dormancy release. Our study demonstrated that seasonal gene expression profiles serve as a valuable indicator for forecasting the timing of dormancy release, benefiting Japanese traditions and providing insights into the biological impacts of climate change. Summary The Yoshino cherry tree Cerasus × yedoensis ‘Somei‐yoshino’ stands out as an iconic springtime symbol in Japan. For the Yoshino cherry trees to bloom in the spring, dormant buds must undergo a period of exposure to low temperatures, allowing them to break dormancy. Key genes related to dormancy release, known as DORMANCY‐ASSOCIATED MADS‐box (DAM), have been extensively studied. However, it remains unclear how these genes function in natural environments to regulate the timing of bud dormancy release. To develop a genetically informed predictive model for bud dormancy release, we explored seasonal changes in genome‐wide gene expression profiles in the Yoshino cherry trees at three distinct sites in Japan. Five distinct genome‐wide transcription profiles, subjectively named as modes—early summer, summer, autumn, winter, and spring—were identified, with the winter and spring modes observed when the daily mean temperature was below approximately 10°C. Our experiments of bud dormancy release, along with the assessment of expression profiles of DAM genes, have revealed that among the six DAM genes, DAM4 expression profile is the most indicative of the rate of bud dormancy break. Our estimates suggest that, on average, the tree needs to be exposed to temperatures below 10.1°C for 61.1 days to suppress DAM4 expression to the threshold required for bud dormancy release. Our projections for the timing of bud dormancy release indicated a delay of approximately 2.3 days per decade from 1990 to 2020. Our study demonstrated that gene expression serves as a valuable indicator for forecasting the timing of dormancy release.
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- 2024
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27. Wheat TaTIFY3B and TaTIFY10A play roles in seed germination and abiotic stress responses in transgenic Arabidopsis and rice
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Hanxi Liu, Yaxin Yao, Jiayang Ma, Shaoyu Wang, Song Li, Weiwei Wang, Xinmiao Yu, Fengli Sun, Chao Zhang, and Yajun Xi
- Subjects
Wheat TaTIFY3B and TaTIFY10A ,Seed germination ,Flowering ,Root length ,ABA/JA ,Salt/drought ,Botany ,QK1-989 - Abstract
Abstract Background Seed germination is a key process in the plant life cycle that affects the vegetative and reproductive stages of plants. Although the JAZ gene family has been characterized in many plants, the relationship between the JAZ gene and seed germination is still unclear. Results We identified two members of the JAZ family from wheat, TaTIFY3B and TaTIFY10A. TaTIFY3B and TaTIFY10A were localized in both the cell membrane and nucleus. Spatio-temporal expression analysis of TaTIFY3B and TaTIFY10A in wheat revealed that these genes are essential for the preharvest sprouting (PHS) stage of seed development, with expression levels significantly decreasing during the ripening period. Transgenic rice plants overexpressing wheat TaTIFY3B and TaTIFY10A improved seed germination rates. Transgenic Arabidopsis plants overexpressing wheat TaTIFY10A improved seed germination rates and promoted flowering. In addition, abscisic acid (ABA) and jasmonic acid (JA) were found to induce TaTIFY3B and TaTIFY10A expression. Under different ABA concentrations, the seed germination rates of transgenic rice and Arabidopsis overexpressing TaTIFY3B and TaTIFY10A are superior to wild-type (WT) and mutant plants, and the root lengths of Arabidopsis overexpressing TaTIFY3B and TaTIFY10A also change. Under different JA concentrations, there is no difference in the seed germination rate of rice overexpressing TaTIFY3B and TaTIFY10A compared to WT and mutant plants, but there is a significant difference in the seed germination rate and root length of overexpressing Arabidopsis compared to WT and mutant plants. Under different concentrations of salt and drought treatments, the seed germination rate and root length of overexpressing Arabidopsis of TaTIFY3B and TaTIFY10A are affected. Conclusions This study offers a novel perspective for understanding the molecular basis of pre-harvest sprouting and provides potential candidate genes for controlling wheat seed germination.
- Published
- 2024
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28. Analyzing the effects of different GA3 applications on plant root architecture and above-ground properties in tulip cultivars
- Author
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Ömer Sari
- Subjects
tulips ,ga3 ,root analyzing ,growing ,flowering ,plant height ,Agriculture (General) ,S1-972 - Abstract
In the study, the effects of 0, 100, 200 and 400 ppm spray applications of GA3 on root and above-ground parts of 'Jan Reus', 'Bloody Mary' and 'Yokohama' tulip cultivars were determined. According to the results, on the development of plant upper part properties, 200 ppm in 'Jan Reus' and 'Yokohama' and 100 ppm in 'Bloody Mary' were the most effective applications. Again, the least increases in upper part properties were obtained from the control plants in 'Jan Reus' and 'Bloody Mary', and from the 100 ppm application in 'Yokohama'. While 100 ppm was the most effective application in 'Jan Reus' and 'Yokohama' in terms of root development, the effect of the applications in 'Bloody Mary' was lower than the control. The application that least increased root development was determined as 400 ppm in 'Jan Reus' and 200 ppm in 'Bloody Mary' and 'Yokohama'. Root growth was found to be negatively related to GA3 content. High GA3 is thought to negatively affect overall root growth, possibly by suppressing the effect of auxin. It is assumed that GA3 produced by the plant itself may be sufficient for root development or may be effective at much lower dose applications. On the other hand, it has been determined that the effects of GA3 application vary depending on the variety. According to these results, it is recommended to apply it at a dose of 200 ppm to ensure flowering by providing cooling in tulip cultivars and cut flower cultivation. High doses of GA3 are not recommended for root development.
- Published
- 2024
29. Phenological stages analysis in peach trees using electronic nose
- Author
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Stevan Jr. Sergio Luiz, Garcia Alan Fernando Coelho, Menegotto Bruno Adriano, Rocha Jose Carlos Ferreira Da, Siqueira Hugo Valadares, and Ayub Ricardo Antonio
- Subjects
electronic nose ,machine learning ,peach ,flowering ,volatile organic compounds ,thinning ,Agriculture ,Agriculture (General) ,S1-972 - Abstract
Thinning is an expensive and time-consuming management practice used in peach orchards to improve resource distribution among plants and improve production quality. Determining the right time and intensity for thinning is challenging and involves expertise. Furthermore, it generally consumes many hours of work, which makes, in some cases, unfeasible to analyze an entire orchard. For this reason, information that can assist in making making decisions about thinning can improve the cost–benefit ratio of the technique. To mitigate these problems, an electronic nose system, the e-nose, that explores the relationship between the smell of peach trees outdoors and the different growth phases was developed. Twenty-two composed volatile samples were collected from around peach trees (open environment) during its reproductive period (around 39 days) and five supervised machine learning classification algorithms (k-nearest neighbors (KNN), multilayer perceptron (MLP), random forest (RF), logistic regression (LR), and support vector machine (SMV)) were used to analyze the data, to evaluate the possibility of estimating phenological stages from odor environment. The result showed that all models achieved a balanced accuracy greater than 97.5%. As a secondary contribution, the importance of sensors was also analyzed for this application, and a combination of three sensors achieved a classification rate of 100% with the KNN classifier. The e-nose system was successful in distinguishing between petal drop, initial fruit formation, advanced fruit formation, and formed fruit. These results demonstrate the potential of using an electronic nose in a remote system to assist in decision-making in orchard practices as thinning.
- Published
- 2024
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30. Somatic Embryogenesis, Plantlet Regeneration and In vitro Flowering from Cotyledon Culture in a Legume Oil Crop, Peanut (Arachis hypogaea L.) under NaCl-stress Conditions
- Author
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Abirami, K. and Vikrant
- Subjects
cotyledon ,in vitro ,flowering ,regeneration ,salinity ,somatic embryos. ,Biochemistry ,QD415-436 - Abstract
Present study aims to establish somatic embryogenesis and plantlet regeneration from cotyledon culture in peanut (Arachis hypogaea L. cv. TMV13) under NaCl-stress conditions. Cotyledon tissue was found to be efficient for somatic embryogenesis in MS medium fortified with 10mg/L of 2,4-dichlorophenoxyacetic acid (2,4-D). Moreover, in order to achieve salt-tolerant regenerants in peanut, cotyledons were inoculated on MS-medium supplemented with various concentrations of NaCl-salt in presence of 2,4-D (10mg/L). Results indicate that with the increase in NaCl-concentrations in medium, frequency of embryogenic callus formation gradually declines and obtained as minimum (17.1±0.16%) with high concentration (150mM) of NaCl-salt while NaCl (200mM) was proved to be lethal. Further, salt-tolerant embryogenic callus was transferred to medium added with (0.5mg/L, 1.0mg/L, 1.5mg/L, and 2.0mg/L) of BAP in combination with (1.5mg/L) of IAA and NaCl (100mM) for the germination of somatic embryos followed by shoot regeneration. Significantly, the maximum frequency (70.2±0.59%) of shoot regeneration was obtained on medium containing BAP (1.5mg/L), IAA (1.5mg/L) and NaCl (100mM). Moreover, salt-tolerant regenerated shoots were further transferred to medium containing kinetin (1.0mg/L, 2.0mg/L, 3.0mg/L, and 5.0mg/L) along with NAA (1.5mg/L) and NaCl (100mM) for root initiation. The high frequency (51±0.7%) of root regeneration was observed on ½ MS medium containing kinetin (2.0mg/L), NAA (1.5mg/L), and NaCl (100mM). Interestingly, rooting medium fortified with NaCl (100mM) was also proved to be effective for precocious induction of in vitro flowering (26.66±0.12%) in the regenerated plantlets. The regenerated plantlets were further transferred to plastic cup soil and acclimatized under greenhouse conditions. The result indicated, salt-tolerant peanut cotyledon culture also shows In Vitro plantlet regeneration and flower formation.
- Published
- 2024
31. Individual and combined effects of high‐temperature stress at booting and flowering stages on rice grain quality.
- Author
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Wang, Wei, Xiao, Liujun, Mahmood, Aqib, Xu, Hanwen, Tang, Liang, Liu, Leilei, Liu, Bing, Cao, Weixing, and Zhu, Yan
- Abstract
BACKGROUND: High temperature stress (HTS) has become a serious threat to rice grain quality and few studies have examined the effects of HTS across multiple stages on rice grain quality. In the present study, we conducted 2 years of HTS treatments under three temperature regimes (32/22 °C, 40/30 °C and 44/34 °C) and HTS durations of 2 days and 4 days at three critical stages: booting, flowering, and a combination of booting and flowering. We employed the heat degree days (HDD) metric, which accounts for both the level and duration of HTS, to quantify the relationships between grain quality traits and HTS. RESULTS: The results revealed the diverse effects of HTS on rice grain quality at different stages, durations and temperature levels. HTS significantly (P < 0.05) reduced grain quality, with the highest sensitivities (reduction per 1 °C day−1 increase in HDD) observed at the flowering stage, followed by the combined and booting stages treatments under mild HTS treatment (40/30 °C). However, under extreme HTS treatments (44/34 °C) for 4 days, rice grains subjected to combined HTS treatment experienced complete mortality. CONCLUSION: Pre‐exposed to HTS at the booting stage within a certain intensity can alleviate the adverse effects of post‐flowering HTS on grain quality. This provides valuable insights for assessing the potential impact of multiple HTS events on the grain quality under future climate warming. © 2024 Society of Chemical Industry. [ABSTRACT FROM AUTHOR]
- Published
- 2025
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32. A GWAS study highlights significant associations between a series of indels in a FLOWERING LOCUS T gene promoter and flowering time in white lupin (Lupinus albus L.)
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Sandra Rychel-Bielska, Wojciech Bielski, Anna Surma, Paolo Annicchiarico, Jolanta Belter, Bartosz Kozak, Renata Galek, Nathalie Harzic, and Michał Książkiewicz
- Subjects
Flowering ,Vernalization ,Flowering locus T ,Promoter ,Indel ,GWAS ,Botany ,QK1-989 - Abstract
Abstract Background White lupin (Lupinus albus L.) is a high-protein Old World grain legume with remarkable food and feed production interest. It is sown in autumn or early spring, depending on the local agroclimatic conditions. This study aimed to identify allelic variants associated with vernalization responsiveness, in order to improve our knowledge of legume flowering regulatory pathways and develop molecular selection tools for the desired phenology as required for current breeding and adaptation to the changing climate. Results Some 120 white lupin accessions originating from a wide range of environments of Europe, Africa, and Asia were phenotyped under field conditions in three environments with different intensities of vernalization, namely, a Mediterranean and a subcontinental climate sites of Italy under autumn sowing, and a suboceanic climate site of France under spring sowing. Two hundred sixty-two individual genotypes extracted from them were phenotyped in a greenhouse under long-day photoperiod without vernalization. Phenology data, and marker data generated by Diversity Arrays Technology sequencing (DArT-seq) and by PCR-based screening targeting published quantitative trait loci (QTLs) from linkage map and newly identified insertion/deletion polymorphisms in the promoter region of the FLOWERING LOCUS T homolog, LalbFTc1 gene (Lalb_Chr14g0364281), were subjected to a genome-wide association study (GWAS). Population structure followed differences in phenology and isolation by distance pattern. The GWAS highlighted numerous loci significantly associated with flowering time, including four LalbFTc1 gene promoter deletions: 2388 bp and 2126 bp deletions at the 5’ end, a 264 bp deletion in the middle and a 28 bp deletion at the 3’ end of the promoter. Besides LalbFTc1 deletions, this set contained DArT-seq markers that matched previously published major QTLs in chromosomes Lalb_Chr02, Lalb_Chr13 and Lalb_Chr16, and newly discovered QTLs in other chromosomes. Conclusions This study highlighted novel QTLs for flowering time and validated those already published, thereby providing novel evidence on the convergence of FTc1 gene functional evolution into the vernalization pathway in Old World lupin species. Moreover, this research provided the set of loci specific for extreme phenotypes (the earliest or the latest) awaiting further implementation in marker-assisted selection for spring- or winter sowing.
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- 2024
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33. Diversification of FT-like genes in the PEBP family contributes to the variation of flowering traits in Sapindaceae species
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Xing Huang, Hongsen Liu, Fengqi Wu, Wanchun Wei, Zaohai Zeng, Jing Xu, Chengjie Chen, Yanwei Hao, Rui Xia, and Yuanlong Liu
- Subjects
Sapindaceae ,Lychee (Litchi chinensis) ,Flowering ,FT1-like ,Cis-regulatory element ,Plant culture ,SB1-1110 ,Botany ,QK1-989 - Abstract
Abstract Many species of Sapindaceae, such as lychee, longan, and rambutan, provide nutritious and delicious fruit. Understanding the molecular genetic mechanisms that underlie the regulation of flowering is essential for securing flower and fruit productivity. Most endogenous and exogenous flowering cues are integrated into the florigen encoded by FLOWERING LOCUS T. However, the regulatory mechanisms of flowering remain poorly understood in Sapindaceae. Here, we identified 60 phosphatidylethanolamine-binding protein-coding genes from six Sapindaceae plants. Gene duplication events led to the emergence of two or more paralogs of the FT gene that have evolved antagonistic functions in Sapindaceae. Among them, the FT1-like genes are functionally conserved and promote flowering, while the FT2-like genes likely serve as repressors that delay flowering. Importantly, we show here that the natural variation at nucleotide position − 1437 of the lychee FT1 promoter determined the binding affinity of the SVP protein (LcSVP9), which was a negative regulator of flowering, resulting in the differential expression of LcFT1, which in turn affected flowering time in lychee. This finding provides a potential molecular marker for breeding lychee. Taken together, our results reveal some crucial aspects of FT gene family genetics that underlie the regulation of flowering in Sapindaceae.
- Published
- 2024
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34. Effects of seedling containers on the growth, flowering, and physiology of purple-leaf Lagerstroemia indica seedling
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WANG Xiangying, WEI Lijiao, WANG Xiaoming, TANG Li, ZENG Huijie, and CHEN Yi
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purple-leaf lagerstroemia indica, ,container seedlings, ,container type, ,container size, ,growth ,flowering ,physiology ,Biology (General) ,QH301-705.5 ,Botany ,QK1-989 - Abstract
Abstract [Objective] This study aims to examine the effects of container type and specification on the growth, blooming, and physiology of purple-leaf Lagerstroemia indica seedlings. The goal is to examine the optimal seedling container for the cultivation of purple-leaf L. indica seedlings and to provide basis for effective seedling breeding in containers. [Methods] Taking the excellent new variety ‘Ebony Embers’ of purple-leaf L. indica as research materials. Three type containers, black plastic nutrient cups (C1), white nonwoven beauty planting bags (C2), and black root-control containers (C3), with three specifications (diameter×height, cm) of 16×16 (D1), 21×21 (D2), and 25×25 (D3), were selected to set nine treatments. Seedlings under different treatments were measured for growth, flowering, and physiological indexes. [Results] (1) Different nursery containers had significant effects on the growth, flowering, and physiology of purple-leaf L. indica seedlings. The growth, root system, biomass, flowering period, flower diameter, inflorescence, soluble protein content, soluble sugar content, relative chlorophyll content, net photosynthesis rate, stomatal conductance, transpiration rate, and other indexes in the same container type were increased with the increase in the specification of the containers. (2) Diameter growth, total root length, total root surface area, total root volume, number of root tips, aboveground dry mass, belowground dry mass, total dry mass, and flowering time were greatest in the C3D3 treatment, which was higher than the smallest C1D1 treatment by 817.12%, 108.12%, 94.60%, 75.66%, 144.14%, 135.67%, 228.45%, 164.65% and 34.48%, respectively. Seedling height growth, crown growth, leaf area, and inflorescence length and width were the highest in the C1D3 treatment, which was higher than the lowest C1D1 treatment by 116.05%, 81.39%, 114.95%, 70.44%, and 65.79%, respectively. Relative chlorophyll content and water use efficiency were the greatest in the C3D3 treatment, while soluble protein and soluble sugar content, net photosynthetic rate, and stomatal conductance were the highest in the C1D3 treatment. The intercellular CO2 concentration and water use efficiency did not differ significantly among the treatments. (3) The comprehensive analysis score for each index was as follows: C3D3>C1D3>C2D3 >C3D2>C2D2>C1D2>C2D1>C3D1>C1D1. [Conclusion] The black root-control container performs well in terms of diameter growth, root growth index, biomass, flowering time and diameter, relative chlorophyll content, and net photosynthetic rate. The most suitable container for 2-year-old seedlings of purple- leaf L. indica is the black root-control container with a diameter of 25 cm and a height of 25 cm.
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- 2024
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35. PHO1: linking phosphate nutrition translocation and floral signalling in plants.
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He, Cunman and Shou, Huixia
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TRANSCRIPTION factors , *FLOWERING of plants , *PLANT nutrition , *GENE expression , *PLANT reproduction , *FLOWERING time , *PLANT translocation - Abstract
The article discusses the role of PHO1, a protein involved in phosphate translocation, in regulating flowering time in plants. The study found that mutations in the PHO1 gene resulted in delayed flowering in Arabidopsis plants. The authors also discovered that PHO1 interacts with the jasmonic acid (JA) signaling pathway, which is known to play a role in plant reproduction. Additionally, the study identified other genes and hormonal pathways that may be involved in the regulation of flowering time. The findings contribute to our understanding of the molecular mechanisms governing flowering time regulation in plants. [Extracted from the article]
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- 2024
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36. PHOSPHATE1-mediated phosphate translocation from roots to shoots regulates floral transition in plants.
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Dai, Senhuan, Chen, Huiying, Shi, Yutao, Xiao, Xinlong, Xu, Lei, Qin, Cheng, Zhu, Yiyong, Yi, Keke, Lei, Mingguang, and Zeng, Houqing
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FLOWERING of plants , *FLOWERING time , *SHOOT apexes , *JASMONIC acid , *ANGIOSPERMS - Abstract
Phosphorus nutrition has been known for a long time to influence floral transition in plants, but the underlying mechanism is unclear. Arabidopsis phosphate transporter PHOSPHATE1 (PHO1) plays a critical role in phosphate translocation from roots to shoots, but whether and how it regulates floral transition is unknown. Here, we show that knockout mutation of PHO1 delays flowering under both long- and short-day conditions. The late flowering of pho1 mutants can be partially rescued by Pi supplementation in rosettes or shoot apices. Grafting assay indicates that the late flowering of pho1 mutants is a result of impaired phosphate translocation from roots to shoots. Knockout mutation of SPX1 and SPX2 , two negative regulators of the phosphate starvation response, partially rescues the late flowering of pho1 mutants. PHO1 is epistatic to PHO2, a negative regulator of PHO1, in flowering time regulation. Loss of PHO1 represses the expression of some floral activators, including FT encoding florigen, and induces the expression of some floral repressors in shoots. Genetic analyses indicate that at least jasmonic acid signaling is partially responsible for the late flowering of pho1 mutants. In addition, we find that rice PHO1;2 , the homolog of PHO1 , plays a similar role in floral transition. These results suggest that PHO1 integrates phosphorus nutrition and flowering time, and could be used as a potential target in modulating phosphorus nutrition-mediated flowering time in plants. [ABSTRACT FROM AUTHOR]
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- 2024
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37. RcOST1L phosphorylates RcPIF4 for proteasomal degradation to promote flowering in rose.
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Sun, Jingjing, Liu, Hongchi, Wang, Weinan, Fan, Chunguo, Yuan, Guozhen, Zhou, Rui, Lu, Jun, Liu, Jinyi, and Wang, Changquan
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FLOWERING of plants , *FLOWERING time , *LIGHT intensity , *ANGIOSPERMS , *VALUE (Economics) - Abstract
Summary: Flowering is a vital agronomic trait that determines the economic value of most ornamental plants. The flowering time of rose (Rosa spp.) is photoperiod insensitive and is thought to be tightly controlled by light intensity, although the detailed molecular mechanism remains unclear.Here, we showed that rose plants flower later under low‐light (LL) intensity than under high‐light (HL) intensity, which is mainly related to the stability of PHYTOCHROME‐INTERACTING FACTORs (RcPIFs) mediated by OPEN STOMATA 1‐Like (RcOST1L) under different light intensity regimes.We determined that HL conditions trigger the rapid phosphorylation of RcPIFs before their degradation. A yeast two‐hybrid screen identified the kinase RcOST1L as interacting with RcPIF4. Moreover, RcOST1L positively regulated rose flowering and directly phosphorylated RcPIF4 on serine 198 to promote its degradation under HL conditions. Additionally, phytochrome B (RcphyB) enhanced RcOST1L‐mediated phosphorylation of RcPIF4 via interacting with the active phyB‐binding motif. RcphyB was activated upon HL and recruited RcOST1L to facilitate its nuclear accumulation, in turn leading to decreased stability of RcPIF4 and flowering acceleration.Our findings illustrate how RcPIF abundance safeguards proper rose flowering under different light intensities, thus uncovering the essential role of RcOST1L in the RcphyB–RcPIF4 module in flowering. [ABSTRACT FROM AUTHOR]
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- 2024
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38. A Hierarchical Model to Predict Time of Flowering of Kiwifruit Using Weather Data and Budbreak Dynamics.
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Zhang, Jingjing, Alavi, Maryam, Guo, Lindy, Richardson, Annette C., Kramer-Walter, Kris, French, Victoria, and Jesson, Linley
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PLANT phenology ,FLOWERING time ,ORCHARD management ,METEOROLOGICAL stations ,PEST control ,KIWIFRUIT - Abstract
Accurate prediction of flowering times is essential for efficient orchard management for kiwifruit, facilitating timely pest and disease control and pollination interventions. In this study, we developed a predictive model for flowering time using weather data and observations of budbreak dynamics for the 'Hayward' and 'Zesy002' kiwifruit. We used historic data of untreated plants collected from 32 previous studies conducted between 2007 and 2022 and analyzed budbreak and flowering timing alongside cumulative heat sum (growing degree days, GDDs), chilling unit (CU) accumulation, and other environmental variables using weather data from the weather stations nearest to the study orchards. We trained/parameterized the model with data from 2007 to 2019, and then evaluated the model's efficacy using testing data from 2020 to 2022. Regression models identified a hierarchical structure with the accumulation of GDDs at the start of budbreak, one of the key predictors of flowering time. The findings suggest that integrating climatic data with phenological events such as budbreak can enhance the predictability of flowering in kiwifruit vines, offering a valuable tool for kiwifruit orchard management. [ABSTRACT FROM AUTHOR]
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- 2024
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39. 紫苏磷脂酰乙醇胺结合蛋白基因家族成员 PfFT3 调控开花功能.
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王其凤, 冯小燕, 李 慧, 侯福朋, 郭 曦, 陆俊杏, 胡 建, and 张 涛
- Abstract
Perilla frutescens, a short-day plant, is rich in biologically active substances and nutrients. Current research on Perilla frutescens focuses on agronomic traits such as yield and fatty acid accumulation, with limited exploration of the flowering process and floral organ development. The molecular regulatory mechanisms underlying these aspects remain unclear. FLOWERING LOUC T (FT) is a florigen in Arabidopsis, plays critical roles in floral transition. PfFT3 is unannotated by genome but annotated by transcriptomics data to the FT-like subfamily. Its function in controlling flowering is yet to be explored. Here subcellular localization analysis showed that PfFT3 is localized in the nucleus and cytoplasm. The plant over-expression vector pCAMBIAI1303-PfFT3 was constructed and transformed into wild-type (Col-0) and mutant fd-2, fd-3, and ft-10 plants by agrobacterium-mediated inflorescence infiltration as a means of obtaining genetically stable and pure overexpression and backfill transgenic lines in Arabidopsis, respectively. Analysis of the results showed that overexpression of PfFT3 significantly promoted early flowering in Arabidopsis and rescued the late-flowering phenotype of the mutants fd-2, fd-3, and ft-10, and that expression of the exogenous PfFT3 promoted the expression of the downstream endogenous flowering genes AtSOC1, AtAP1, AtFUL, and AtLFY. This study demonstrates the positive role of PfFT3 in promoting flowering, providing a foundation for further investigation of PfPEBP function and advancing the breeding of early-flowering Perilla frutescens cultivars. [ABSTRACT FROM AUTHOR]
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- 2024
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40. Monitoring flight activity of Tropinota squalida ssp. pilosa (coleoptera: cetoniidae) in relation to apple flowers phenology in Central West Tunisia.
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Soltani, Rasmi and Rahmouni, Hedi
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SCARABAEIDAE , *FIELD research , *BEETLES , *WATER use , *SUBSPECIES - Abstract
During the last decade, the hairy rose beetle, Tropinota squalida ssp. pilosa (Brulle) (Coleoptera: Scarabaeidae), represents a recrudescent subspecies in fruit orchards of Central west Tunisia. This pest destroys flowers of pome- and stone-fruit species by feeding on their reproductive organs. The main goal of this study was to provide fundamental information on the flight activity of this pest in an attempt to find and establish effective control methods against it. The study was conducted in apple orchards of Foussena, located in Central west Tunisia, during springs of the years 2017, 2021 and 2022. Water traps used in field experiments were placed between rows of trees to capture the beetles. The results showed that the activity of beetles was closely associated with the temperature rise and apple blossom onset. Over three years, we observed seven weeks of flight activity in the field. This activity commenced in early March within orchards featuring early varieties where it lasted for 4 to 5 weeks. Following that, the activity came to a close after 3 weeks by late April in apple orchards with autumnal varieties. The most significant captures (50%) occurred in the second half of March. The flight pattern exhibited only one peak in the third week of March, suggesting that T. squalida pilosa is a monovoltine species. [ABSTRACT FROM AUTHOR]
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- 2024
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41. Relationship between Chilling Accumulation and Heat Requirement for Flowering in Peach Varieties of Different Chilling Requirements.
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Yan, Juan, Cai, Zhixiang, Chen, Zheng, Zhang, Binbin, Li, Jiyao, Xu, Jianlan, Ma, Ruijuan, Yu, Mingliang, and Shen, Zhijun
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BUD development , *POLLEN , *MORPHOGENESIS , *SCANNING electron microscopy , *FLOWER development , *PEACH - Abstract
Previous studies have shown a negative correlation between chilling accumulation (CA) and heat requirements (HRs) in peaches (Prunus persica (L.) Batsch), consistent with findings in other plants in spring events. However, there is a lack of comparative research on the CA–HR relationship in peach varieties with different chilling requirements (CRs), and the specific impact of CA on HR reduction remains poorly described. To address this, we investigated the effects of CA on the days and HR for flowering in 54 peach varieties of differing CRs. Scanning electron microscopy was used to observe the effects of CA on the phenology of floral organ development in a selected peach variety. Our results indicate that, in general, peaches exhibit a reduced HR and accelerated flowering as the CA increases, but that the strength and trend of the CA–HR relationship is influenced by the CR and the variety. Low-CR varieties showed less sensitivity to CA increments, requiring higher relative increases in CA to significantly lower the HR, whereas high-CR varieties appeared to be more sensitive, with even modest changes leading to substantial reductions in HR. However, variations from this generality exist, even within varieties displaying the same rCA (the ratio of CA to CR). Additionally, we provide a summary of the relationship between the rCA and drHR in peaches of differing CRs, and identify several varieties exhibiting a strong response in the CA–HR relationship. This study also highlights the impact of CA on flower bud development, revealing slower progression under lower CA levels and accelerated growth with an increased CA. In particular, we identified the critical period of the enlargement and initiation of green scales as indicative of successful pollen grain formation. Finally, we present a schematic of the CA–HR relationship for flowering in peaches. [ABSTRACT FROM AUTHOR]
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- 2024
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42. Two B‐box proteins orchestrate vegetative and reproductive growth in summer chrysanthemum.
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Wang, Qi, Wang, Lijun, Cheng, Hua, Wang, Shuang, Li, Jiayu, Zhang, Deng, Zhou, Lijie, Chen, Sumei, Chen, Fadi, and Jiang, Jiafu
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CHRYSANTHEMUMS , *ANGIOSPERMS , *SUMMER , *PLANT development , *FLOWER development , *PHENOTYPES - Abstract
Floral transition, the switch from vegetative to reproductive growth, is extremely important for the growth and development of flowering plants. In the summer chrysanthemum, CmBBX8, a member of the subgroup II B‐box (BBX) family, positively regulates the transition by physically interacting with CmERF3 to inhibit CmFTL1 expression. In this study, we show that CmBBX5, a B‐box subgroup I member comprising two B‐boxes and a CCT domain, interacts with CmBBX8. This interaction suppresses the recruitment of CmBBX8 to the CmFTL1 locus without affecting its transcriptional activation activity. CmBBX5 overexpression led to delayed flowering under both LD (long‐day) and SD (short‐day) conditions, while lines expressing the chimeric repressor gene‐silencing (CmBBX5‐SRDX) exhibited the opposite phenotype. Subsequent genetic evidence indicated that in regulating flowering, CmBBX5 is partially dependent on CmBBX8. Moreover, during the vegetative growth period, levels of CmBBX5 expression were found to exceed those of CmBBX8. Collectively, our findings indicate that both CmERF3 and CmBBX5 interact with CmBBX8 to dampen the regulation of CmFTL1 via distinct mechanisms, which contribute to preventing the premature flowering of summer chrysanthemum. Summary statement: Here, we found CmBBX5 and CmBBX8 dampen the recruitment of CmBBX8 to the CmFTL1 locus, thereby preventing premature flowering in summer chrysanthemum, which contributes to deep understanding of the flowering regulation and laying the foundations for molecular breeding in chrysanthemum. [ABSTRACT FROM AUTHOR]
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- 2024
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43. An Overview on MADS Box Members in Plants: A Meta-Review.
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Adhikari, Prakash Babu and Kasahara, Ryushiro Dora
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BOXWOOD , *PLANT communities , *PLANT growth , *PLANT species , *DATABASES - Abstract
Most of the studied MADS box members are linked to flowering and fruit traits. However, higher volumes of studies on type II of the two types so far suggest that the florigenic effect of the gene members could just be the tip of the iceberg. In the current study, we used a systematic approach to obtain a general overview of the MADS box members' cross-trait and multifactor associations, and their pleiotropic potentials, based on a manually curated local reference database. While doing so, we screened for the co-occurrence of terms of interest within the title or abstract of each reference, with a threshold of three hits. The analysis results showed that our approach can retrieve multi-faceted information on the subject of study (MADS box gene members in the current case), which could otherwise have been skewed depending on the authors' expertise and/or volume of the literature reference base. Overall, our study discusses the roles of MADS box members in association with plant organs and trait-linked factors among plant species. Our assessment showed that plants with most of the MADS box member studies included tomato, apple, and rice after Arabidopsis. Furthermore, based on the degree of their multi-trait associations, FLC, SVP, and SOC1 are suggested to have relatively higher pleiotropic potential among others in plant growth, development, and flowering processes. The approach devised in this study is expected to be applicable for a basic understanding of any study subject of interest, regardless of the depth of prior knowledge. [ABSTRACT FROM AUTHOR]
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- 2024
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44. Effects of Heat Stress during Anthesis and Grain Filling Stages on Some Physiological and Agronomic Traits in Diverse Wheat Genotypes.
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Mirosavljević, Milan, Mikić, Sanja, Župunski, Vesna, Abdelhakim, Lamis, Trkulja, Dragana, Zhou, Rong, Špika, Ankica Kondić, and Ottosen, Carl-Otto
- Subjects
LEAF temperature ,CHLOROPHYLL spectra ,THERMAL stresses ,PHYSIOLOGY ,HIGH temperatures ,WINTER wheat ,WHEAT - Abstract
Heat stress represents a significant environmental challenge that adversely impacts the growth, physiology, and productivity of wheat. In order to determine the response to high temperatures of the wheat varieties developed mostly in the Pannonian environmental zone, as well as varietal differences, we subjected seven varieties from Serbia, one from Australia, and one from the UK to thermal stress during anthesis and mid-grain filling and combined stress during both of these periods. The changes in chlorophyll fluorescence and index, leaf temperature, and main agronomic traits of nine winter wheat varieties were investigated under high temperatures. Heat stress negatively affected leaf temperature, chlorophyll fluorescence, and the chlorophyll index during different growth stages. Compared to the control, stress at anthesis, mid-grain filling, and combined stress resulted in yield reductions of 32%, 46%, and 59%, respectively. Single treatment at anthesis had a more severe effect on the number of grains per plant, causing a 38% reduction compared to the control. Moreover, single treatment during mid-grain filling resulted in the greatest decline in grain weight, with a 29% reduction compared to the control. There was a significant varietal variation in heat tolerance, highlighting Avangarda and NS 40s as the most tolerant varieties that should be included in regular breeding programs as valuable sources of heat tolerance. Understanding the genetic and physiological mechanisms of heat tolerance in these promising varieties should be the primary focus of future research and help develop targeted breeding strategies and agronomic practices to mitigate the adverse effects of heat stress on wheat production. [ABSTRACT FROM AUTHOR]
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- 2024
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45. Deciphering the Regulatory Mechanism of PmMYB21 in Early Flowering of Prunus mume through Dap-Seq and WGCNA Analysis.
- Author
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Yuan, Xi, He, Ran, Zhang, Hui, Liu, Dongyan, Liu, Donghuan, Niu, Zhihong, Zhang, Yu, and Xia, Xinli
- Subjects
TRANSCRIPTION factors ,PROMOTERS (Genetics) ,GENE regulatory networks ,FRUIT trees ,LOW temperatures - Abstract
Prunus mume Siebold & Zucc (mei) is a horticulturally important fruit tree that undergoes anthesis in winter. Therefore, its flowering process is challenged by low-temperatures conditions. The transcription factor (TF) MYB21 is pivotal in regulating the flowering process, and particularly functions in petal expansion and filament elongation. However, the regulatory mechanism of PmMYB21 in mei remains unknown. To breed early-flowering cultivars, a deeper understanding of PmMYB21-regulated genes is essential. We employed DNA affinity purification sequencing (Dap-seq) to identify downstream genes bound by PmMYB21. The results revealed the promoter region is the primary binding region of PmMYB21, and the AGTTAGGTARR motif (motif1) is the predominant binding sequence type. Our analysis identified 8533 genes that are potentially bound by PmMYB21 with the motif1 sequence type, within the promoter region. These genes are involved in biological processes critical to flowering. Further refinement of candidate genes was achieved through Weighted Gene Co-expression Network Analysis (WGCNA), which identified the co-expressed genes of PmMYB21 during flowering activity. Integrating Dap-seq and WGCNA data, we narrowed down the candidate gene list to 54, with a focus on 4 MADS-box genes and 2 hormone signaling genes that are crucial to the flowering process under low-temperature conditions. This study offers valuable insights into the molecular underpinnings of PmMYB21's role in the low-temperature flowering regulation of mei, paving the way for the development of new cultivars adapted to early blooming. [ABSTRACT FROM AUTHOR]
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- 2024
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46. تعیین ارقام مناسب کلزا با استفاده از خصوصیات ،نموی فیزیولوژیک و زراعی در دو استان البرز و گلستان.
- Author
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حمید جباری, ابوالفضل فرجی, عباس فلاح طوسی, امیر حسین شیرانی, نادیا صفوی فرد, محمد باقر ولی پور, and علی عبادی
- Subjects
LEAF area index ,GRAIN yields ,SPRING ,CULTIVARS ,BLOCK designs - Abstract
Background & Objective: The purpose of the experiment was to determine and identify new cultivars to replace them with old cultivars in two climates, cold-temperate (Alborz province) and humid warm-temperate (Golestan province). Materials and Methods: The experiment was carried out during two years (2017-18 and 2018-19) in Alborz and Golestan provinces by using 14 spring and 10 winter rapeseed varieties in a randomized complete block design with three replications. In Alborz province (Karaj), Okapi variety and in Golestan province (Gorgan) RGS003 were selected as regional control. Results: The results showed that the response of cultivars in terms of active and effective cumulative growing degree days (ADD and EDD, respectively) in two years of the experiment were relatively the same at two cold-temperate and humid warm-temperate climates, but the changes in their grain yield in each year were completely different and dependent on the year. In Gorgan region, cultivars DK 7170, Trapper, Hyola 50, Hyola 401 and Hyola 420 had more grain yield potential with lower ADD for the beginning of flowering and more leaf area index and SPAD index compared to RGS003 cultivar (control). In the Karaj region, the new and intermediate-maturing winter genotypes (Nafis and HL3721 line) had the higher seed yield due to less ADD for the beginning of flowering and the growth period duration, more silique per plant, and higher seeds per silique, thousand seed weight, leaf area index and SPAD index (significant difference) compared to okapi variety (control). Conclusion: Trapper, Hyola 50 and Delgan cultivars with seed yield ranged from 2500 to 3000 kg.ha-1for planting in Gorgan region and Nafis cultivar with seed yield ranged from 3200 to 3300 kg.ha-1 for planting in Karaj region were recognized as suitable and high potential and good substitutes for the old RGS003 and Okapi cultivars, respectively. [ABSTRACT FROM AUTHOR]
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- 2024
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47. A GWAS study highlights significant associations between a series of indels in a FLOWERING LOCUS T gene promoter and flowering time in white lupin (Lupinus albus L.).
- Author
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Rychel-Bielska, Sandra, Bielski, Wojciech, Surma, Anna, Annicchiarico, Paolo, Belter, Jolanta, Kozak, Bartosz, Galek, Renata, Harzic, Nathalie, and Książkiewicz, Michał
- Subjects
- *
FLOWERING time , *LUPINUS albus , *LOCUS (Genetics) , *CLIMATE change adaptation , *GENOME-wide association studies , *LEGUMES - Abstract
Background: White lupin (Lupinus albus L.) is a high-protein Old World grain legume with remarkable food and feed production interest. It is sown in autumn or early spring, depending on the local agroclimatic conditions. This study aimed to identify allelic variants associated with vernalization responsiveness, in order to improve our knowledge of legume flowering regulatory pathways and develop molecular selection tools for the desired phenology as required for current breeding and adaptation to the changing climate. Results: Some 120 white lupin accessions originating from a wide range of environments of Europe, Africa, and Asia were phenotyped under field conditions in three environments with different intensities of vernalization, namely, a Mediterranean and a subcontinental climate sites of Italy under autumn sowing, and a suboceanic climate site of France under spring sowing. Two hundred sixty-two individual genotypes extracted from them were phenotyped in a greenhouse under long-day photoperiod without vernalization. Phenology data, and marker data generated by Diversity Arrays Technology sequencing (DArT-seq) and by PCR-based screening targeting published quantitative trait loci (QTLs) from linkage map and newly identified insertion/deletion polymorphisms in the promoter region of the FLOWERING LOCUS T homolog, LalbFTc1 gene (Lalb_Chr14g0364281), were subjected to a genome-wide association study (GWAS). Population structure followed differences in phenology and isolation by distance pattern. The GWAS highlighted numerous loci significantly associated with flowering time, including four LalbFTc1 gene promoter deletions: 2388 bp and 2126 bp deletions at the 5' end, a 264 bp deletion in the middle and a 28 bp deletion at the 3' end of the promoter. Besides LalbFTc1 deletions, this set contained DArT-seq markers that matched previously published major QTLs in chromosomes Lalb_Chr02, Lalb_Chr13 and Lalb_Chr16, and newly discovered QTLs in other chromosomes. Conclusions: This study highlighted novel QTLs for flowering time and validated those already published, thereby providing novel evidence on the convergence of FTc1 gene functional evolution into the vernalization pathway in Old World lupin species. Moreover, this research provided the set of loci specific for extreme phenotypes (the earliest or the latest) awaiting further implementation in marker-assisted selection for spring- or winter sowing. [ABSTRACT FROM AUTHOR]
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- 2024
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48. Flowering time genes branching out.
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Colleoni, Pierangela E, Es, Sam W van, Winkelmolen, Ton, Immink, Richard G H, and Esse, G Wilma van
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FLOWERING time , *FOOD crops , *GENES , *CARRIER proteins , *PLANT regulators , *POTATOES - Abstract
Plants are sessile by nature, and as such they have evolved to sense changes in seasonality and their surrounding environment, and adapt to these changes. One prime example of this is the regulation of flowering time in angiosperms, which is precisely timed by the coordinated action of two proteins: FLOWERING LOCUS T (FT) and TERMINAL FLOWER 1 (TFL1). Both of these regulators are members of the PHOSPHATIDYLETHANOLAMINE BINDING PROTEIN (PEBP) family of proteins. These regulatory proteins do not interact with DNA themselves, but instead interact with transcriptional regulators, such as FLOWERING LOCUS D (FD). FT and TFL1 were initially identified as key regulators of flowering time, acting through binding with FD; however, PEBP family members are also involved in shaping plant architecture and development. In addition, PEBPs can interact with TCP transcriptional regulators, such as TEOSINTE BRANCHED 1 (TB1), a well-known regulator of plant architecture, and key domestication-related genes in many crops. Here, we review the role of PEBPs in flowering time, plant architecture, and development. As these are also key yield-related traits, we highlight examples from the model plant Arabidopsis as well as important food and feed crops such as, rice, barley, wheat, tomato, and potato. [ABSTRACT FROM AUTHOR]
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- 2024
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49. FLOWERING LOCUS T-mediated thermal signalling regulates age-dependent inflorescence development in Arabidopsis thaliana.
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González-Suárez, Pablo, Walker, Catriona H, Lock, Thomas, and Bennett, Tom
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ARABIDOPSIS thaliana , *SEED size , *GENITALIA , *LEAF development , *CHILDBEARING age , *FLOWERS , *INFLORESCENCES - Abstract
Many plants show strong heteroblastic changes in the shape and size of organs as they transition from juvenile to reproductive age. Most attention has been focused on heteroblastic development in leaves, but we wanted to understand heteroblastic changes in reproductive organ size. We therefore studied the progression of reproductive development in the model plant Arabidopsis thaliana , and found strong reductions in the size of flowers, fruit, seed, and internodes during development. These did not arise from correlative inhibition by older fruits, or from changes in inflorescence meristem size, but seemed to stem from changes in the size of floral organ primordia themselves. We hypothesized that environmental conditions might influence this heteroblastic pattern and found that the ambient temperature during organ initiation strongly influences organ size. We show that this temperature-dependent heteroblasty is dependent on FLOWERING LOCUS T (FT)-mediated signal integration, adding to the repertoire of developmental processes regulated by this pathway. Our results demonstrate that rising global temperatures will not affect just fertility, as is widely described, but also the size and seed number of fruits produced. However, we also show that such effects are not hard-wired, and that selective breeding for FT expression during reproductive development could mitigate such effects. [ABSTRACT FROM AUTHOR]
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- 2024
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- View/download PDF
50. Genetic and epigenetic basis of phytohormonal control of floral transition in plants.
- Author
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Li, Xiaoxiao, Lin, Chuyu, Lan, Chenghao, and Tao, Zeng
- Subjects
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PLANT hormones , *ABSCISIC acid , *FLOWERING time , *EPIGENETICS , *FLOWERING of plants , *JASMONATE , *POLLINATORS - Abstract
The timing of the developmental transition from the vegetative to the reproductive stage is critical for angiosperms, and is fine-tuned by the integration of endogenous factors and external environmental cues to ensure successful reproduction. Plants have evolved sophisticated mechanisms to response to diverse environmental or stress signals, and these can be mediated by hormones to coordinate flowering time. Phytohormones such as gibberellin, auxin, cytokinin, jasmonate, abscisic acid, ethylene, and brassinosteroids and the cross-talk among them are critical for the precise regulation of flowering time. Recent studies of the model flowering plant Arabidopsis have revealed that diverse transcription factors and epigenetic regulators play key roles in relation to the phytohormones that regulate floral transition. This review aims to summarize our current knowledge of the genetic and epigenetic mechanisms that underlie the phytohormonal control of floral transition in Arabidopsis, offering insights into how these processes are regulated and their implications for plant biology. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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