13 results on '"feeding RNAi"'
Search Results
2. Usefulness of multiple chalk‐based food colorings for inducing better gene silencing by feeding RNA interference in planarians.
- Author
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Hattori, Miki, Miyamoto, Mai, Hosoda, Kazutaka, and Umesono, Yoshihiko
- Subjects
- *
RNA interference , *ANIMAL models in research , *COLORING matter in food , *INVERTEBRATES , *GENE silencing - Abstract
Planarians have become widely recognized as one of the major animal models for regeneration studies in invertebrates. To induce RNA interference (RNAi) by feeding in planarians, the widely accepted protocol is one in which animals undergo two or three feedings of food containing double‐stranded RNA (dsRNA) plus visible food coloring (e.g., blood) for confirmation of feeding by individual animals. However, one possible problem is that incorporated food coloring is often retained within the gut for several days, which makes it difficult to confirm the success of each round of dsRNA feeding based on the difference of the color density within the gut before and after feeding. As a consequence, the difference of appetite levels among individuals undergoing dsRNA feeding leads to phenotypic variability among them due to insufficient knockdown. In our attempts to overcome this problem, we have developed a novel method for achieving robust confirmation of the success of dsRNA feeding in individuals fed multiple times by means of including a combination of three different colored chalks (pink, yellow and blue) as food coloring. Notably, we found that this method is superior to the conventional method for positively marking individuals that actively consumed the dsRNA‐containing food during four times of once‐daily feeding. Using these selected animals, we obtained stable and sufficiently strong RNAi‐induced phenotypes. We termed this improved multi‐colored chalk‐spiked method of feeding RNAi “Candi” and propose its benefits for gene function analysis in planarians. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
3. Feeding Delivery of dsHvSnf7 Is a Promising Method for Management of the Pest Henosepilachna vigintioctopunctata (Coleoptera: Coccinellidae)
- Author
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Jing Lü, Zhuoqi Liu, Wei Guo, Mujuan Guo, Shimin Chen, Huali Li, Chunxiao Yang, Youjun Zhang, and Huipeng Pan
- Subjects
henosepilachna vigintioctopunctata ,hvsnf7 ,feeding rnai ,mortality ,ultrastructural change ,Science - Abstract
RNA interference (RNAi) techniques have emerged as powerful tools in the development of novel management strategies for the control of insect pests, such as Henosepilachna vigintioctopunctata, which is a major solanaceous pest in Asia. Our results showed that levels of HvSnf7 expression were greater in larval midguts than in other tissues. Silencing of HvSnf7 led to greater H. vigintioctopunctata mortality rates and appeared to be time- and partially dose-dependent. Bacterially expressed dsHvSnf7 that was applied to detached plant leaves caused 98, 88, and 60% mortality in 1st and 3rd instars, and adults after 10, 12, and 14 d, respectively; when applied to living plants, bacterially expressed dsHvSnf7 led to mortality in 1st and 3rd instars, with no effect on adults. Bacterially expressed dsHvSnf7 led to improved plant protection against H. vigintioctopunctata. Ultrastructural changes caused by HvSnf7-RNAi in larval midguts showed extensive loss of cellular contents that indicate loss of membrane integrity. This study indicate that HvSnf7 potentially can be used as RNAi target gene for controlling of H. vigintioctopunctata.
- Published
- 2019
- Full Text
- View/download PDF
4. RNAi assays in the striped flea beetle (Phyllotreta striolata) suggest Psγ-COPI and PsArf1COPI as potential molecular targets for pest control.
- Author
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Guo, Mujuan, Gao, Ran, Nanda, Satyabrata, Li, Yingqiu, Guo, Changfei, Zhou, Xuguo, Zhang, Youjun, Yang, Chunxiao, and Pan, Huipeng
- Subjects
- *
FLEA beetles , *DRUG target , *RNA interference , *LETHAL mutations , *INSECT mortality - Abstract
Phyllotreta striolata (Fabricius), commonly known as the striped flea beetle (SFB), is a notorious insect pest that attacks Brassicaceae plants worldwide, leading to tremendous economic losses. RNA interference (RNAi) has been proposed as a promising strategy for sustainable and eco-friendly pest control. In this study, a total of nine housekeeping genes including PsVATPA , PsHSP90 , PsEF1A , PsRPL6 , PsRPS24 , PsActin , PsTUBA , PsRPS18 , and PsRPL4 were evaluated under four different conditions (organization, population, sex, and RNAi). PsEF1A and PsVATPA were identified as the best reference genes for RNAi bioassay. Furthermore, a total of 24 target genes were selected to investigate their RNAi effects in SFB adults with double-stranded RNAs (dsRNAs), five of them showed significant mortality (28.00% to 70.00%), namely Psα-COPI , Psβ-COPI , PsRPS18 , Psγ-COPI , and PsArf1COPI. We found that gene transcript levels of the two most lethal genes, Psγ-COPI and PsArf1COPI , were significantly decreased after treated with the target dsRNAs either by feeding or injection method. The findings from this study demonstrated that the introduction of dsRNAs via oral feedings or injection induces the RNAi-mediated silencing of target genes and can lead to insect mortality. Overall, the identified target genes can be explored in developing RNAi-based insecticides for SFB control. [Display omitted] • Key candidate gene orthologs were identified in P. striolata based on the transcriptome data. • PsEF1A and PsVATPA were identified as the best reference genes for RNAi study. • ds Psγ-COPI and ds PsArf1COPI caused P. striolata mortality by both feeding or injection. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
5. EF-1α silencing by feeding RNAi suppresses resting cyst formation in Colpoda cucullus Nag-1 strain.
- Author
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Sogame, Y., Hori, M., and Matsuoka, T.
- Subjects
- *
COLPODA , *ENCYSTMENT , *RNA interference - Abstract
It is reported that the expression level of EF-1α in Colpoda cucullus Nag-1 is markedly enhanced within several hours after the onset of encystment induction. In this study, the Colpoda strain (stock EQ-1) known to promptly encyst also showed early EF-1α expression while the strain (stock ES-1) known to show prolonged encystment also showed delayed EF-1α expression. In cells in which EF-1α is silenced by feeding RNAi, the cyst formation was prolonged, but normal cyst walls were formed. These results suggest that Colpoda EF-1α is involved in the early morphogenetic events of the resting cyst formation by accelerating protein translation or cytosleletal dynamics such as microtubule disintegration. [ABSTRACT FROM AUTHOR]
- Published
- 2016
6. Screening of lethal genes for feeding RNAi by leaf disc-mediated systematic delivery of dsRNA in Tetranychus urticae
- Author
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Kwon, Deok Ho, Park, Ji Hyun, and Lee, Si Hyeock
- Subjects
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TWO-spotted spider mite , *DOUBLE-stranded RNA , *RNA interference , *LETHAL mutations , *RIBOSOMAL proteins , *GENETIC transcription , *POLYMERASE chain reaction , *TISSUE analysis - Abstract
Abstract: To identify genes that kill Tetranychus urticae when knocked down via RNA interference (RNAi), several lethal genes were screened by the systemic delivery of dsRNA via leaf disc feeding. Four candidate genes (β subunit of coatomer protein complex, T-COPB2; M1 metalloprotease, T-M1MP; Ribosomal protein S4, T-RPS4; A subunit of V-ATPase, T-VATPase) and a control gene (EGFP) were tested for RNAi. All dsRNAs that permeated the leaf disc (ca. 15-mm diameter) were detected at 12h post-treatment, indicating that dsRNA could move through vascular tissues. To evaluate RNAi toxicity, mortalities were assessed for 120h following treatment with dsRNA. Treatment with T-COPB2, T-M1MP, T-RPS4 and T-VATPase dsRNAs caused 65.4%, 15.9%, 36.1% and 21.1% mortalities at 120h post-treatment, respectively. Reduction of all target gene transcripts following dsRNA treatment was confirmed by quantitative PCR, demonstrating that dsRNA feeding-based RNAi could indeed kill T. urticae. In summary, dsRNA delivery via leaf disc is an effective system to screen for lethal genes. Furthermore, some genes, such as T-COPB2, T-M1MP, T-RPS4 and T-VATPase, can be used to establish an RNAi-based control system against T. urticae. [Copyright &y& Elsevier]
- Published
- 2013
- Full Text
- View/download PDF
7. Ingested RNA interference for managing the populations of the Colorado potato beetle, Leptinotarsa decemlineata.
- Author
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Zhu, Fang, Xu, Jingjing, Palli, Roshan, Ferguson, Joseph, and Palli, Subba R
- Subjects
COLORADO potato beetle ,INSECT pest control ,DISEASE resistance of plants ,DOUBLE-stranded RNA ,BIOLOGICAL pest control agents ,BACTERIAL insecticides - Abstract
BACKGROUND: RNA interference (RNAi) is a breakthrough technology for conducting functional genomics studies and also as a potential tool for crop protection against insect pests. The major challenge for efficient pest control using RNAi in the field is the development of efficient and reliable methods for production and delivery of double-stranded RNA (dsRNA). In this paper, the potential of feeding dsRNA expressed in bacteria or synthesized in vitro to manage populations of Colorado potato beetle, Leptinotarsa decemlineata (Say) (CPB), was investigated. RESULTS: Feeding RNAi successfully triggered the silencing of all five target genes tested and caused significant mortality and reduced body weight gain in the treated beetles. This study provides the first example of an effective RNAi response in insects after feeding dsRNA produced in bacteria. CONCLUSION: These results suggest that the efficient induction of RNAi using bacteria to deliver dsRNA is a possible method for management of CPB. This could be also a promising bioassay approach for genome-wide screens to identify effective target genes for use as novel RNAi-based insecticides. Copyright © 2010 Society of Chemical Industry [ABSTRACT FROM AUTHOR]
- Published
- 2011
- Full Text
- View/download PDF
8. Feeding Delivery of dsHvSnf7 Is a Promising Method for Management of the Pest Henosepilachna vigintioctopunctata (Coleoptera: Coccinellidae)
- Author
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Huipeng Pan, Jing Lü, Liu Zhuoqi, Guo Mujuan, Chunxiao Yang, Guo Wei, Chen Shimin, Youjun Zhang, and Huali Li
- Subjects
0106 biological sciences ,Veterinary medicine ,media_common.quotation_subject ,Henosepilachna vigintioctopunctata ,Insect ,01 natural sciences ,ultrastructural change ,03 medical and health sciences ,RNA interference ,feeding RNAi ,Gene silencing ,lcsh:Science ,030304 developmental biology ,media_common ,0303 health sciences ,Larva ,biology ,fungi ,biology.organism_classification ,HvSnf7 ,mortality ,010602 entomology ,Insect Science ,Coccinellidae ,Instar ,lcsh:Q ,PEST analysis - Abstract
RNA interference (RNAi) techniques have emerged as powerful tools in the development of novel management strategies for the control of insect pests, such as Henosepilachna vigintioctopunctata, which is a major solanaceous pest in Asia. Our results showed that levels of HvSnf7 expression were greater in larval midguts than in other tissues. Silencing of HvSnf7 led to greater H. vigintioctopunctata mortality rates and appeared to be time- and partially dose-dependent. Bacterially expressed dsHvSnf7 that was applied to detached plant leaves caused 98, 88, and 60% mortality in 1st and 3rd instars, and adults after 10, 12, and 14 d, respectively, when applied to living plants, bacterially expressed dsHvSnf7 led to mortality in 1st and 3rd instars, with no effect on adults. Bacterially expressed dsHvSnf7 led to improved plant protection against H. vigintioctopunctata. Ultrastructural changes caused by HvSnf7-RNAi in larval midguts showed extensive loss of cellular contents that indicate loss of membrane integrity. This study indicate that HvSnf7 potentially can be used as RNAi target gene for controlling of H. vigintioctopunctata.
- Published
- 2019
- Full Text
- View/download PDF
9. Role of arginine kinase in Paramecium tetraurelia (Ciliophora, Peniculida): Subcellular localization of AK3 and phosphoarginine shuttle system in cilia.
- Author
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Yano, Daichi, Funadani, Ryouji, Uda, Kouji, Matsuoka, Tatsuomi, and Suzuki, Tomohiko
- Subjects
PARAMECIUM ,WESTERN immunoblotting ,CILIATA ,TRITON X-100 ,POST-translational modification ,CILIA & ciliary motion - Abstract
• The PMF analysis indicated that the C-terminal peptide of AK3 is farnesylated, suggesting that the AK3 is likely to be bound to membrane. • AK3 was detected in the ciliary fraction by Western blot analysis. • The feeding RNA interference experiment indicated that the ciliary movement of AK1- and AK3-silenced cells was significantly reduced to half the value of control cells. • P. tetraurelia AK3 affects swimming velocity, presumably through the phosphoarginine shuttle system present in cilia. The ciliate Paramecium tetraurelia has four arginine kinase genes (AK1, AK2, AK3, and AK4). Of these genes, only AK3 has a signal sequence for farnesylation, a post-translational modification that enables anchoring of the modified enzyme to the ciliary membrane. To confirm this modification, AK3 was synthesized using a cell-free protein synthesis system and the peptide masses were analyzed using peptide mass fingerprinting (PMF). The PMF analysis indicated that the C-terminal peptide of AK3 is farnesylated. Thus, AK3 can be farnesylated under physiologically appropriate conditions. To determine the subcellular localization of P. tetraurelia AK3, Western blot analysis was performed using an AK3 polyclonal antibody for the proteins extracted from intact cells and ciliary fractions. When extraction was performed using Triton X-100, AK3 was detected the ciliary fraction. This result suggested that the ciliary fraction contains AK3. In addition, we investigated the role of P. tetraurelia AKs in ciliary movement using the feeding RNA interference method. The swimming velocity of AK1- and AK3-silenced cells was significantly reduced to half the value of that control cells. In summary, P. tetraurelia AK3 is likely to be located in the ciliary membrane and influences swimming velocity, presumably through the phosphoarginine shuttle system present in cilia. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
10. Feeding Delivery of dsHvSnf7 Is a Promising Method for Management of the Pest Henosepilachnavigintioctopunctata (Coleoptera: Coccinellidae).
- Author
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Lü, Jing, Liu, Zhuoqi, Guo, Wei, Guo, Mujuan, Chen, Shimin, Li, Huali, Yang, Chunxiao, Zhang, Youjun, and Pan, Huipeng
- Subjects
- *
PEST control , *LADYBUGS , *BEETLES , *RNA interference , *INSECT pest control , *PLANT protection - Abstract
RNA interference (RNAi) techniques have emerged as powerful tools in the development of novel management strategies for the control of insect pests, such as Henosepilachna vigintioctopunctata, which is a major solanaceous pest in Asia. Our results showed that levels of HvSnf7 expression were greater in larval midguts than in other tissues. Silencing of HvSnf7 led to greater H. vigintioctopunctata mortality rates and appeared to be time- and partially dose-dependent. Bacterially expressed dsHvSnf7 that was applied to detached plant leaves caused 98, 88, and 60% mortality in 1st and 3rd instars, and adults after 10, 12, and 14 d, respectively; when applied to living plants, bacterially expressed dsHvSnf7 led to mortality in 1st and 3rd instars, with no effect on adults. Bacterially expressed dsHvSnf7 led to improved plant protection against H. vigintioctopunctata. Ultrastructural changes caused by HvSnf7-RNAi in larval midguts showed extensive loss of cellular contents that indicate loss of membrane integrity. This study indicate that HvSnf7 potentially can be used as RNAi target gene for controlling of H. vigintioctopunctata. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
11. Orally delivered dsRNA induces knockdown of target genes and mortality in the Asian long-horned beetle, Anoplophora glabripennis.
- Author
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Dhandapani RK, Duan JJ, and Palli SR
- Subjects
- Administration, Oral, Animals, Coleoptera growth & development, Gene Knockdown Techniques, Inhibitor of Apoptosis Proteins genetics, Insect Control, Insect Proteins genetics, Larva genetics, Larva growth & development, Coleoptera genetics, RNA Interference, RNA, Double-Stranded
- Abstract
The Asian long-horned beetle (ALB) Anoplophora glabripennis is a serious invasive forest pest in several countries, including the United States. Methods available to manage or eradicate this pest are extremely limited, but RNA interference (RNAi) technology is a potentially effective method to control ALB. In this study, we used sucrose feeding bioassay for oral delivery of double-strand RNA (dsRNA) to ALB larvae.
32 P-labeled dsRNA orally delivered to ALB larvae using the sucrose droplet feeding method was processed to small interfering RNA. Feeding neonate larvae with dsRNA targeting genes coding for the inhibitor of apoptosis (IAP), vacuolar sorting protein SNF7 (SNF7), and snakeskin (SSK) induced knockdown of target genes and mortality. Feeding 2 µg of dsRNA per day for 3 days did not induce a significant decrease in the expression of target genes or mortality. However, feeding 5 or 10 µg of dsRNA per day for 3 days induced a significant decrease in the expression of target genes and 50-90% mortality. Interestingly, feeding 2.5 µg each of dsIAP plus dsSNF7, dsIAP plus dsSSK, or dsSNF7 plus dsSSK per day for 3 days induced a significant decrease in the expression of both target genes and approximately 80% mortality. Our findings demonstrate that orally delivered dsRNA induces target gene knockdown and mortality in ALB neonate larvae and RNAi technology may have the potential for effective ALB control., (© 2020 Wiley Periodicals, Inc.)- Published
- 2020
- Full Text
- View/download PDF
12. Feeding Delivery of dsHvSnf7 Is a Promising Method for Management of the Pest Henosepilachna vigintioctopunctata (Coleoptera: Coccinellidae).
- Author
-
Lü J, Liu Z, Guo W, Guo M, Chen S, Li H, Yang C, Zhang Y, and Pan H
- Abstract
RNA interference (RNAi) techniques have emerged as powerful tools in the development of novel management strategies for the control of insect pests, such as Henosepilachna vigintioctopunctata , which is a major solanaceous pest in Asia. Our results showed that levels of HvSnf7 expression were greater in larval midguts than in other tissues. Silencing of HvSnf7 led to greater H. vigintioctopunctata mortality rates and appeared to be time- and partially dose-dependent. Bacterially expressed dsHvSnf7 that was applied to detached plant leaves caused 98, 88, and 60% mortality in 1st and 3rd instars, and adults after 10, 12, and 14 d, respectively; when applied to living plants, bacterially expressed dsHvSnf7 led to mortality in 1st and 3rd instars, with no effect on adults. Bacterially expressed dsHvSnf7 led to improved plant protection against H. vigintioctopunctata . Ultrastructural changes caused by HvSnf7-RNAi in larval midguts showed extensive loss of cellular contents that indicate loss of membrane integrity. This study indicate that HvSnf7 potentially can be used as RNAi target gene for controlling of H. vigintioctopunctata .
- Published
- 2019
- Full Text
- View/download PDF
13. EF-1α silencing by feeding RNAi suppresses resting cyst formation in Colpoda cucullus Nag-1 strain
- Author
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Yoichiro Sogame, Hori, M., and Matsuoka, T.
- Subjects
0301 basic medicine ,03 medical and health sciences ,encystment ,030104 developmental biology ,lcsh:Biology (General) ,feeding RNAi ,Colpoda ,EF-1α ,lcsh:QH301-705.5 - Abstract
It is reported that the expression level of EF-1α in Colpoda cucullus Nag-1 is markedly enhanced within several hours after the onset of encystment induction. In this study, the Colpoda strain (stock EQ-1) known to promptly encyst also showed early EF-1α expression while the strain (stock ES-1) known to show prolonged encystment also showed delayed EF-1α expression. In cells in which EF-1α is silenced by feeding RNAi, the cyst formation was prolonged, but normal cyst walls were formed. These results suggest that Colpoda EF-1α is involved in the early morphogenetic events of the resting cyst formation by accelerating protein translation or cytosleletal dynamics such as microtubule disintegration., Invertebrate Survival Journal, Vol 13 No 1 (2016)
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