43 results on '"de Souza AJ"'
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2. Effects Caused by the Ingestion of Microplastics: First Evidence in the Lambari Rosa ( Astyanax altiparanae ).
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Lourenço ALA, Olivatto GP, de Souza AJ, and Tornisielo VL
- Abstract
Microplastics are a class of contaminants that pose a threat to aquatic biota, as they are easily found in aquatic ecosystems and can be ingested by a wide variety of organisms, such as fish. The lambari rosa ( Astyanax altiparanae ) is a microphage fish, which feeds on microscopic beings and particles, making it potentially susceptible to ingesting MPs discarded in the environment. In addition, this fish is of great economic and food importance, as it is used for human consumption. This study aimed to evaluate the accumulation and possible toxicological effects caused to lambari rosa ( n = 450) by the ingestion of polyethylene (PE) and polyethylene terephthalate (PET) MPs, since the MPs of these polymers in the form of granules, fragments, and fibers are the most commonly reported in the aquatic environment. The parameters investigated here were the quantitative analysis of ingested MPs using microscopic and staining techniques, as well as the mortality rate, malformations/injuries, and impaired weight gain. At the end of the experiment, it was concluded that MPs from both polymers accumulated in the gastrointestinal tract of the lambari rosa, and that dietary exposure, especially to the PET polymer, was responsible for increasing the mortality rate in this species.
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- 2023
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3. Crotalaria juncea L. enhances the bioremediation of sulfentrazone-contaminated soil and promotes changes in the soil bacterial community.
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de Souza AJ, Santos E, Ribeiro FP, de Araújo Pereira AP, Viana DG, da Silva Coelho I, Filho FBE, and Santaren KCF
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- Biodegradation, Environmental, Soil Microbiology, Crotalaria metabolism, Sulfonamides metabolism, Triazoles metabolism
- Abstract
Sulfentrazone (STZ) is an efficient tool for the pre- and post-emergence control of monocotyledonous and dicotyledonous weeds in fields of crops such as pineapple, coffee, sugarcane, citrus, eucalyptus, tobacco, and soybean. However, this herbicide persists in the soil, causing phytotoxicity in the subsequent crop. Therefore, it is important to use efficient strategies for the remediation of STZ-contaminated areas. The aim of this study was to evaluate the effects of Crotalaria juncea L. on the remediation of STZ-contaminated soil and on the microbial activity and bacterial community structure therein. The study was conducted in three stages: (i) cultivation of C. juncea in soil contaminated with 200, 400, and 800 g ha
-1 STZ; (ii) determination of the soil microbial activity (basal respiration, microbial biomass carbon, and bacterial community structure); and (iii) cultivation of a bioindicator species and determination of the residual fraction of STZ. The soil microbial activity was impacted by the soil type and STZ dose. Soil previously cultivated with C. juncea (rhizospheric soil) displayed higher CO2 and lower qCO2 values than non-rhizospheric soil (no previous C. juncea cultivation). Increasing doses of STZ reduced the activity and lowered the diversity indices of the soil microorganisms. The bacterial community structure was segregated between the rhizospheric and non-rhizospheric soils. Regardless of soil type, the bioindicator of remediation (Pennisetum glaucum R.Br.) grew only at the STZ dose of 200 g ha-1 , and the plant intoxication level was also lower in rhizospheric soil treated with this herbicide dose. All P. glaucum plants died in the soils treated with 400 and 800 g ha-1 STZ. Previous cultivation of C. juncea in soils contaminated with 200, 400, and 800 g ha-1 STZ reduced the residual fraction of the herbicide by 4.8%, 12.5%, and 17.4%, respectively, compared with that in the non-rhizospheric soils. In conclusion, previous cultivation with C. juncea promoted increases in the soil bacterial activity and diversity indices, mitigated the deleterious effects of STZ on the bioindicator crop, and reduced the residual fraction of the herbicide in the soil., (© 2023. The Author(s) under exclusive licence to Sociedade Brasileira de Microbiologia.)- Published
- 2023
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4. The role of land use, management, and microbial diversity depletion on glyphosate biodegradation in tropical soils.
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Martins GL, de Souza AJ, Osti JF, Gontijo JB, Cherubin MR, Viana DG, Rodrigues MM, Tornisielo VL, and Regitano JB
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- Soil Microbiology, Agriculture, Bacteria genetics, Bacteria metabolism, Glyphosate, Soil, Ecosystem
- Abstract
Land use and management changes affect the composition and diversity of soil bacteria and fungi, which in turn may alter soil health and the provision of key ecological functions, such as pesticide degradation and soil detoxification. However, the extent to which these changes affect such services is still poorly understood in tropical agroecosystems. Our main goal was to evaluate how land-use (tilled versus no-tilled soil), soil management (N-fertilization), and microbial diversity depletion [tenfold (D1 = 10
-1 ) and thousandfold (D3 = 10-3 ) dilutions] impacted soil enzyme activities (β-glycosidase and acid phosphatase) involved in nutrient cycles and glyphosate mineralization. Soils were collected from a long-term experimental area (35 years) and compared to its native forest soil (NF). Glyphosate was selected due to its intensive use in agriculture worldwide and in the study area, as well as its recalcitrance in the environment by forming inner sphere complexes. Bacterial communities played a more important role than the fungi in glyphosate degradation. For this function, the role of microbial diversity was more critical than land use and soil management. Our study also revealed that conservation tillage systems, such as no-tillage, regardless of nitrogen fertilizer use, mitigates the negative effects of microbial diversity depletion, being more efficient and resilient regarding glyphosate degradation than conventional tillage systems. No-tilled soils also presented much higher β-glycosidase and acid phosphatase activities as well as higher bacterial diversity indexes than those under conventional tillage. Consequently, conservation tillage is a key component for sustaining soil health and its functionality, providing critical ecosystem functions, such as soil detoxification in tropical agroecosystems., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper, (Copyright © 2023 Elsevier Inc. All rights reserved.)- Published
- 2023
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5. Physicochemical and bacterial changes during composting of vegetable and animal-derived agro-industrial wastes.
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Martins GL, de Souza AJ, Mendes LW, Gontijo JB, Rodrigues MM, Coscione AR, Oliveira FC, and Regitano JB
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- Animals, Vegetables, Soil, Manure microbiology, Bacteria, Nitrogen analysis, Poultry, Chickens, Industrial Waste analysis, Composting
- Abstract
This study investigates the impact of different agro-industrial organic wastes (i.e., sugarcane filter cake, poultry litter, and chicken manure) on the bacterial community and their relationship with physicochemical attributes during composting. Integrative analysis was performed by combining high-throughput sequencing and environmental data to decipher changes in the waste microbiome. The results revealed that animal-derived compost stabilized more carbon and mineralized a more organic nitrogen than vegetable-derived compost. Composting enhanced bacterial diversity and turned the bacterial community structure similar among all wastes, reducing Firmicutes abundance in animal-derived wastes. Potential biomarkers indicating compost maturation were Proteobacteria and Bacteroidota phyla, Chryseolinea genus and Rhizobiales order. The waste source influenced the final physicochemical attributes, whereas composting enhanced the complexity of the microbial community in the order of poultry litter > filter cake > chicken manure. Therefore, composted wastes, mainly the animal-derived ones, seem to present more sustainable attributes for agricultural use, despite their losses of C, N, and S., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023. Published by Elsevier Ltd.)
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- 2023
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6. NMR-Based Metabolomics Reveals Effects of Water Stress in the Primary and Specialized Metabolisms of Bauhinia ungulata L. (Fabaceae).
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Borim de Souza AJ, Ocampos FMM, Catoia Pulgrossi R, Dokkedal AL, Colnago LA, Cechin I, and Saldanha LL
- Abstract
Bauhinia ungulata is a plant used in Brazilian traditional medicine for the treatment of diabetes. Phytochemical studies revealed flavonoids and the saccharide pinitol related to hypoglycemic activity of the Bauhinia species. To determine the effects of water deficit on ecophysiological parameter and metabolite fingerprints of B. ungulata , specimens were treated with the following water regimens under greenhouse conditions: daily watering (control), watering every 7 days (group 7D), and watering every 15 days (group 15D). Metabolite profiling of the plants subjected to water deficit was determined by LC-HRMS/MS. An NMR-based metabolomics approach applied to analyze the extracts revealed increased levels of known osmoprotective and bioactive compounds, such as D-pinitol, in the water deficit groups. Physiological parameters were determined by gas exchange in planta analysis. The results demonstrated a significant decrease in gas exchange under severe drought stress, while biomass production was not significantly different between the control and group 7D under moderate stress. Altogether, the results revealed that primary and specialized/secondary metabolism is affected by long periods of severe water scarcity downregulating the biosynthesis of bioactive metabolites such as pinitol, and the flavonoids quercetin and kaempferol. These results may be useful for guiding agricultural production and standardizing medicinal herb materials of this medicinal plant.
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- 2023
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7. One stage procedure for developmental dysplasia of the hip in patients aged eight years or older. Systematic review and meta-analysis.
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Matos MA, Almeida ND, Hocevar LS, Tartaglia A, Salles C, and DE Souza AJ
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- Humans, Female, Child, Treatment Outcome, Retrospective Studies, Acetabulum diagnostic imaging, Acetabulum surgery, Hip Dislocation, Congenital diagnostic imaging, Hip Dislocation, Congenital surgery, Developmental Dysplasia of the Hip diagnostic imaging, Developmental Dysplasia of the Hip surgery, Developmental Dysplasia of the Hip complications
- Abstract
The objective of the present study is to perform a systematic review with meta-analysis of the literature on treatment of developmental dysplasia of the hip (DDH) in patients over eight years of age to provide better understanding of therapeutic strategies and results. Authors carried out a systematic review and metanalysis of the literature on DDH treated in patients aged eight years of age or older. A literature search was carefully performed from June 2019 to June 2020. The articles had to report one stage reconstructive surgical treatment of DDH for patients eight years or older, presenting clinical and radiographic evaluation according to the Tonnis and Severin, and McKay systems. Meta-analysis was carried out using the software metanalyst to perform the pooled effect size Nine studies met the inclusion criteria. They assessed a total of 234 patients and 266 hips. Female patients accounted for 75.7% (eight unknown) and the follow-up ranged from 1 to 17.4 years. The majority of the procedures included an acetabular surgery (93.9%) while femoral shortening was performed in 78%. Acceptable outcomes were found in between 67% (Mckay system) and 91% (Severin system) of the cases. Femoral varus and derrotation shortening associated with redirectional osteotomy of the acetabulum (for those with closed triradiate cartilage) or acetabular redirection/reshaping were the most prevalent combined procedures; this strategy can lead to 60% of acceptable clinical results and 90% of radiographically acceptable results. Therefore, our findings give credence to the recommendation for the treatment of DDH in patients over eight years old.
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- 2023
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8. Blend of secondary metabolites from mesquite to improve nutrient digestibility, microbial protein, efficient use of nitrogen, ruminal parameters, and blood metabolites in sheep.
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Barbosa SN, da Silva JRC, Torres TR, Véras RML, de Carvalho AL, de Souza AJ, Dos Santos Neto EL, de Carvalho Sobral G, Feitoza ERF, Morais IMV, and de Souza EJO
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- Animal Feed analysis, Animals, Diet veterinary, Digestion, Fermentation, Male, Nitrogen metabolism, Nutrients, Sheep, Prosopis metabolism, Rumen metabolism
- Abstract
Although chemical additives are able to improve the efficiency of ruminal fermentation, they can leave residues in the meat. However, a blend of secondary metabolites can improve ruminal fermentation without harming the population welfare. Five levels (0.0, 1.5, 3.0, 4.5, and 6.0 g/day) of a blend of secondary metabolites from mesquite extract in sheep feed to promote increases in the nutritional value, ruminal parameters, nitrogen (N) use efficiency, microbial protein (MP) synthesis, and blood metabolites. Ten intact male Santa Inês sheep with average body weight of 55 ± 9.81 kg were used in a 5 × 5 Latin square design, replicated twice. There was a quadratic response of the digestibility of dry matter (DM), organic matter (OM), crude protein (CP), and total digestible nutrients (TDN). Microbial protein concentrations, MP synthesis efficiency, propionic acid levels, and acetic/propionic acid ratio also showed a quadratic response. The blend promoted a quadratic effect on plasma glucose and lactate levels. On the other hand, it decreased the concentrations of ammoniacal nitrogen, plasma urea, and plasma cholesterol. It is recommended to supply a blend of secondary metabolites at 3.43 g/day., (© 2022. The Author(s), under exclusive licence to Springer Nature B.V.)
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- 2022
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9. Land use and roles of soil bacterial community in the dissipation of atrazine.
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de Souza AJ, de Araújo Pereira AP, Pedrinho A, Andreote FD, Tornisielo VL, Tizioto PC, Coutinho LL, and Regitano JB
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- Bacteria metabolism, RNA, Ribosomal, 16S, Soil chemistry, Soil Microbiology, Atrazine analysis, Soil Pollutants analysis
- Abstract
Atrazine (ATZ) is one of the most widely used herbicides in the world even though it is classified as a carcinogenic endocrine disruptor. This study focused on how land use (grazing versus cultivation in parallel soils, the latter under no-till with a seven-year history of ATZ application) and bacterial community diversity affected ATZ dissipation. Proteobacteria, Bacteroidetes, Firmicutes, Actinobacteria, Acidobacteria, Verrucomicrobia, Planctomycetes, and Gemmatimonadetes were the dominant phyla in both soils. The mineralization of ATZ was much higher in soils under cultivation up to the onset of moderate diversity depletion (dilution =10
-3 ), corresponding to 44-52% of the amount applied (< 5% in the grazed soil). This was attributed to the higher diversity and complexity of the soils´ bacterial communities which consist of microbial groups that were more adapted as a result of previous exposure to ATZ. In these cases, ATZ dissipation was attributed mainly to mineralization (DT50 = 4-11 d). However, formation of non-extractable ATZ residues was exceptionally important in the other cases (DT50 = 17-44 d). The cultivated soils also presented a higher number of bacterial genera correlated with ATZ dissipation, in which Acidothermus, Aquicela, Arenimonas, Candidatus_Koribacter, Hirschia, MND1, Nitrospira, Occallatibacter, OM27_clade, and Ralstonia are suggested as potential ATZ-degraders. Finally, ATZ dissipation was mostly associated with an abundance of microbial functions related to energy supply and N-metabolism, suggesting co-metabolism is its first biodegradation step., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)- Published
- 2022
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10. Corrigendum to "Sulfadiazine dissipation as a function of soil bacterial diversity" [Environ. Pollut. 271 (2021) 116374].
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de Souza AJ, Pereira APA, Andreote FD, Tornisielo VL, Tizioto PC, Coutinho LL, and Regitano JB
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- 2021
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11. Bovine tuberculosis due to Mycobacterium bovis and other mycobacteria among water buffalo (Bubalus bubalis) from the Brazilian Amazon.
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Da Silva Pedroso SC, Batista Lima KV, Perini Furlaneto I, Corrêa Rodrigues Y, Saraiva Queiroz Pantoja DK, Souza de Souza AJ, and Assunção Pereira WL
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- Abattoirs, Animals, Brazil epidemiology, Humans, Mycobacterium bovis genetics, Tuberculosis epidemiology, Tuberculosis microbiology, Zoonoses prevention & control, Buffaloes, Mycobacterium bovis isolation & purification, Tuberculosis veterinary
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Introduction: Zoonotic tuberculosis is a disease of public health importance worldwide, especially in developing countries. The present study aimed to investigate the role played by Mycobacterium bovis and other mycobacteria as etiologic agents of bubaline tuberculosis (TB) in the Brazilian Amazon region., Methodology: Granulomatous lesions suggestive of TB obtained from 109 buffaloes (n =109) during sanitary inspection at slaughter were subjected to histopathological evaluation, immunohistochemical (IHC) detection of Mycobacterium antigens, and to molecular tests (PCR) to detect hsp65, IS6110 and RD4 genes, which are specific to Mycobacterium spp., Mycobacterium tuberculosis Complex (MTBC) and M. bovis, respectively., Results: PCR results indicated Mycobacterium infection in 87.2% of the cases, of which 69.5% were positive for M. bovis, 27.4% belonged to MTBC, and 3.1% were probably non-TB mycobacteria. There was good agreement between the genus-specific molecular technique and the histopathological analysis. This high frequency of TB cases caused by non-M. bovis suggests a diversified scenario of mycobacteria associated with bubaline TB in the Brazilian Amazon region., Conclusions: The results reinforce the need of discussing the inclusion of more accurate techniques in examinations carried out by Inspection Services in Brazil., Competing Interests: No Conflict of Interest is declared, (Copyright (c) 2021 Silvia Cristina da Silva Pedroso, Karla Valeria Batista Lima, Ismari Perini Furlaneto, Yan Correa Rodrigues, Darlene Kassia Saraiva Queiroz Pantoja, Alex Junior Souza de Souza, Washington Luiz Assuncao Pereira.)
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- 2021
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12. High Incidence of Congenital Syphilis after Implementation of the Brazilian Ministry of Health Ordinances Related to Maternal Diagnostics.
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Veras ÍS, Feitosa CA, de Souza AJ, Campos LC, Barbosa Costa G, and Ferreira VM
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The increasing rates of maternal and congenital syphilis (CS) infections are public health concerns and need further investigation in order to provide better assistance in epidemiological surveillance and new strategies for the assistance and prevention of CS. In December 2011, the Brazilian Ministry of Health (BMH) implemented ordinance number 3.242, reinforced in 2012 by ordinance number 77, aiming to improve the quality of the syphilis diagnosis system using rapid tests. Here, we evaluate the incidence, lethality, and possible factors associated with CS in Salvador, Bahia, in the pre-resolution period (2007 to 2011) and post-resolution (2012 to 2016). An observational, ecological time-series study is conducted using secondary data collected from the National Notifiable Diseases Information System (SINAN). Linear regression analysis to estimate increases or reductions in the mean incidence over time is also performed. A total of 5470 CS cases are analyzed. The incidence ranges from 2.1 cases per 1000 live births in 2007 to 17.1 cases per 1000 live births in 2019, showing a progressive increase in incidence over the years and reduction of lethality in the post-resolution period. The number of CS cases reported prior to the implementation of the ordinances (2007-2011) does not reveal a significant increase in the incidence. However, in the post-ordinances period (2012-2019), there is an average increase of the number of CS cases by three times over the years, with an average increase of 1.8 new cases annually. Our findings highlight the importance of diagnosis and support information in strategies for CS prevention. Furthermore, these data show a positive impact of resolutions on the diagnosis and evolution of the disease.
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- 2021
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13. Blood plasma metabolomics of children and adolescents with sickle cell anaemia treated with hydroxycarbamide: a new tool for uncovering biochemical alterations.
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Ribeiro PR, Teixeira RDS, Souza AR, Pereira TCS, Boffo EF, Carosio MGA, Ferreira AG, Oliveira RV, Rodrigues LEA, Silva JJ, de Souza AJ, and Ladeia AMT
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- Acids blood, Acute Chest Syndrome etiology, Adolescent, Amino Acids blood, Anemia, Sickle Cell complications, Anemia, Sickle Cell drug therapy, Antisickling Agents pharmacology, Arterial Occlusive Diseases etiology, Biomarkers, Butyrates blood, Child, Chromatography, High Pressure Liquid, Creatine blood, Creatinine blood, Female, Humans, Hydroxyurea pharmacology, Lysophospholipids blood, Male, Mass Spectrometry, Membrane Lipids blood, Models, Biological, Nuclear Magnetic Resonance, Biomolecular, Sphingosine analogs & derivatives, Sphingosine blood, Anemia, Sickle Cell blood, Antisickling Agents therapeutic use, Hydroxyurea therapeutic use, Metabolomics
- Abstract
Sickle cell anaemia (SCA) is a debilitating genetic haemoglobinopathy predominantly affecting the disenfranchised strata of society in Africa and the Americas. The most common pharmacological treatment for this disease is the administration of hydroxycarbamide (HC) for which questions remain regarding its mechanism of action, efficacy and long-term toxicity specifically in paediatric individuals. A multiplatform metabolomics approach was used to assess the metabolome of plasma samples from a population of children and adolescents with SCA with and without HC treatment along with non-SCA individuals. Fifty-three metabolites were identified by ultra-high performance liquid chromatography coupled to high-resolution mass spectrometry (UHPLC-HRMS) and
1 H nuclear magnetic resonance (NMR) with a predominance of membrane lipids, amino acids and organic acids. The partial least-squares discriminant analysis (PLS-DA) analysis allowed a clear discrimination between the different studied groups, revealing clear effects of the HC treatment in the patients' metabolome including rescue of specific metabolites to control levels. Increased creatine/creatinine levels under HC treatment suggests a possible increase in the arginine pool and increased NO synthesis, supporting existing models for HC action in SCA. The metabolomics results extend the current knowledge on the models for SCA pathophysiology including impairment of Lands' cycle and increased synthesis of sphingosine 1-phosphate. Putative novel biomarkers are suggested., (© 2021 British Society for Haematology and John Wiley & Sons Ltd.)- Published
- 2021
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14. The bacterial and fungal communities associated with Anthurium ssp. leaves: Insights into plant endemism and microbe association.
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Andrade PAM, de Souza AJ, Lira SP, Assis MA, Berlinck RGS, and Andreote FD
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- Bacteria classification, Bacteria genetics, Biodiversity, Brazil, Fungi classification, Fungi genetics, Plant Leaves microbiology, Araceae microbiology, Bacteria isolation & purification, Fungi isolation & purification, Microbiota, Mycobiome
- Abstract
It is known that different plant species select specific microbes to live inside their tissues in a process determined by the host genotype, phenotype and geographic location, which can introduce discussion on plant endemism and the assembly of specific microbial communities. Herein, we report the results of an investigation relating the geographic distribution of plant species and the composition of microbial communities associated with plant hosts. The bacterial and fungal community associated with Anthurium plant leaves was mapped to assess the diversity and ecology of the endophytic community associated with Anthurium spp. collected on islands and on the Brazilian mainland. Twenty-six Anthurium specimens were surveyed, distributed throughout the São Paulo state coastline, including Alcatrazes Island, some coastal islands and distinct mainland environments. Bacterial and fungal endophytes were obtained from the leaves of A. alcatrazense, A. loefgrenii, A. penthaphyllum, A. urvellianum and A. intermedium and subjected to massive bacterial 16S rRNA and fungal ITS sequencing. The results indicated that A. alcatrazense, endemic to Alcatrazes Island, hosted a specific bacterial community structure, while its fungal community was similar to that of Anthurium species from other locations. Betaproteobacteria showed a high differential occurrence in A. alcatrazense. Some groups of fungi were found mainly inhabiting A. loefgrenii plants. While Alphaproteobacteria, Gammaproteobacteria, Actinobacteria and Sordariomycetes, Dothiodeomycetes and Tremellomycetes composed the core microbial community among Anthurium plants. The results suggest crucial role for the bacterial communities to endemic plants, while endophytic fungal diversity is less specifically distributed among endemic and nonendemic plant species., (Copyright © 2020. Published by Elsevier GmbH.)
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- 2021
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15. Sulfadiazine dissipation as a function of soil bacterial diversity.
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de Souza AJ, Pereira APA, Andreote FD, Tornisielo VL, Tizioto PC, Coutinho LL, and Regitano JB
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- Animals, Anti-Bacterial Agents, Bacteria genetics, Biodegradation, Environmental, Manure, Soil, Soil Microbiology, Swine, Soil Pollutants analysis, Sulfadiazine
- Abstract
Antibiotic residues in the environment are concerning since results in dispersion of resistance genes. Their degradation is often closely related to microbial metabolism. However, the impacts of soil bacterial community on sulfadiazine (SDZ) dissipation remains unclear, mainly in tropical soils. Our main goals were to evaluate effects of long-term swine manure application on soil bacterial structure as well as effects of soil microbial diversity depletion on SDZ dissipation, using "extinction dilution approach" and
14 C-SDZ. Manure application affected several soil attributes, such as pH, organic carbon (OC), and macronutrient contents as well as bacterial community structure and diversity. Even minor bacterial diversity depletion impacted SDZ mineralization and non-extractible residue (NER) formation rates, but NER recovered along 42 d likely due to soil diversity recovery. However, this period may be enough to spread resistance genes into the environment. Surprisingly, the non-manured natural soil (NS-S1) showed faster SDZ dissipation rate (DT90 = 2.0 versus 21 d) and had a great number of bacterial families involved in major SDZ dissipation pathways (mineralization and mainly NER), such as Isosphaeraceae, Ktedonobacteraceae, Acidobacteriaceae_(Subgroup_1), Micromonosporaceae, and Sphingobacteriaceae. This result is unique and contrasts our hypothesis that long-term manured soils would present adaptive advantages and, consequently, have higher SDZ dissipation rates. The literature suggests instantaneous chemical degradation of SDZ in acidic soils responsible to the fast formation of NER. Our results show that if chemical degradation happens, it is soon followed by microbial metabolism (biodegradation) performed by a pool of bacteria and the newly formed metabolites should favors NER formation since SDZ presented low sorption. It also showed that SDZ mineralization is a low redundancy function., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier Ltd. All rights reserved.)- Published
- 2021
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16. Hydroxyurea treatment is associated with reduced degree of oxidative perturbation in children and adolescents with sickle cell anemia.
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Vinhaes CL, Teixeira RS, Monteiro-Júnior JAS, Tibúrcio R, Cubillos-Angulo JM, Arriaga MB, Sabarin AG, de Souza AJ, Silva JJ, Lyra IM, Ladeia AM, and Andrade BB
- Subjects
- Adolescent, Anemia, Sickle Cell blood, Brazil, Case-Control Studies, Child, Female, Humans, Hydroxyurea pharmacology, Male, Principal Component Analysis, Prospective Studies, Treatment Outcome, Anemia, Sickle Cell drug therapy, Biomarkers blood, Hydroxyurea administration & dosage, Oxidative Stress drug effects
- Abstract
Sickle cell anemia (SCA) is the most common inherited hemolytic anemia worldwide. Here, we performed an exploratory study to investigate the systemic oxidative stress in children and adolescents with SCA. Additionally, we evaluated the potential impact of hydroxyurea therapy on the status of oxidative stress in a case-control study from Brazil. To do so, a panel containing 9 oxidative stress markers was measured in plasma samples from a cohort of 47 SCA cases and 40 healthy children and adolescents. Among the SCA patients, 42.5% were undertaking hydroxyurea. Multidimensional analysis was employed to describe disease phenotypes. Our results demonstrated that SCA is associated with increased levels of oxidative stress markers, suggesting the existence of an unbalanced inflammatory response in peripheral blood. Subsequent analyses revealed that hydroxyurea therapy was associated with diminished oxidative imbalance in SCA patients. Our findings reinforce the idea that SCA is associated with a substantial dysregulation of oxidative responses which may be dampened by treatment with hydroxyurea. If validated by larger prospective studies, our observations argue that reduction of oxidative stress may be a main mechanism through which hydroxyurea therapy attenuates the tissue damage and can contribute to improved clinical outcomes in SCA.
- Published
- 2020
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17. Acoustic Measurements of the Glottic Source of Female Teachers With Dysphonia.
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de Souza AJ, Gonçalves DDS, Bastilha GR, Christmann MK, Scapini F, and Cielo CA
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- Acoustics, Adult, Cross-Sectional Studies, Female, Humans, Phonation, Retrospective Studies, Speech Acoustics, Speech Production Measurement, Voice Quality, Dysphonia diagnosis
- Abstract
Objective: To verify the acoustic measurements of glottic source of dysphonic teachers of a medium-sized municipality of interior of the state., Methods: Retrospective, cross-sectional, and quantitative study, with a composite sample of 34 dysphonic teachers, of which 21 teachers without laryngeal affections and 13 with laryngeal affections, mean age 39.1 years old and 39.5 years old, respectively. Glottic source acoustic analysis was performed with the Multi-Dimensional Voice Program Advanced. The data were analyzed statistically to verify the significance of each acoustic measure between the groups (with laryngeal affection, without laryngeal affection, and total) and in relation to the normality proposed by the software., Results: In the three conditions (groups with and without affection and total) the means were statistically below normality in the measurements of maximum and minimum fundamental frequency. In the group without affection, frequency, and noise measurements presented above normality. In both groups, measurements of frequency, noise, and subharmonic segments were above normal, and number of voice breaks below normal., Conclusion: Acoustic parameters outside the normal pattern showed an aperiodic vocal production, with presence of noise and instability in the vocal signal, in dysphonic teachers with or without alteration at the laryngeal level., (Copyright © 2019 The Voice Foundation. Published by Elsevier Inc. All rights reserved.)
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- 2020
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18. Shifts in the bacterial community of saliva give insights on the relationship between obesity and oral microbiota in adolescents.
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de Andrade PAM, Giovani PA, Araujo DS, de Souza AJ, Pedroni-Pereira A, Kantovitz KR, Andreote FD, Castelo PM, and Nociti-Jr FH
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- Adolescent, Bacteria genetics, Denaturing Gradient Gel Electrophoresis, Female, Haemophilus isolation & purification, Humans, Male, Micrococcaceae isolation & purification, Neisseria isolation & purification, Prevotella isolation & purification, RNA, Ribosomal, 16S genetics, Veillonella isolation & purification, Bacteria classification, Bacteria isolation & purification, Microbiota genetics, Obesity microbiology, Saliva microbiology
- Abstract
The current study aimed at the determination of the impact of obesity on the salivary microbiome in adolescents. Sixty subjects ranging 14-17 years old were enrolled (obese: n = 30-50% females, and normal weight: n = 30-50% females). Stimulated saliva was collected for denaturing gradient gel electrophoresis (DGGE) band patterns and massive 16S rRNA gene sequencing using the Ion Torrent platform. Overall, data analysis revealed that male subjects harbored a higher diverse salivary microbiome, defined by a significant higher richness (32.48 versus 26.74) and diversity (3.36 versus 3.20), higher Simpson values (0.96 versus 0.95) and distinct bacterial community structure considering either sex or condition (p < 0.05). Bacterial community fingerprinting analysis in human saliva showed a positive correlation with increased body mass index (BMI) in adolescents. Veillonella, Haemophilus and Prevotella occurrence was found to be affected by BMI, whereas Neisseria and Rothia occurrence was significantly impacted by sex in obese subjects. Our findings suggest that male and female adolescents may harbor a naturally distinct salivary microbiota and that obesity may specifically have an impact on their oral bacterial community. The potential dysbiotic oral microbiome in obese adolescents raises new insights on the etiology and prevention of future conditions in these populations.
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- 2020
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19. Third record of Rhodnius amazonicus and comparative study with R. pictipes (Hemiptera, Reduviidae, Triatominae).
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da Rosa JA, Souza ES, da Costa Teixeira A, Barbosa RR, de Souza AJ, Belintani T, Nascimento JD, Gil-Santana HR, and de Oliveira J
- Subjects
- Animals, Brazil, Female, Genitalia, Female ultrastructure, Male, Microscopy, Electron, Scanning, Ovum ultrastructure, Rhodnius ultrastructure, Thorax ultrastructure, Abdomen anatomy & histology, Genitalia, Female anatomy & histology, Head anatomy & histology, Rhodnius anatomy & histology, Thorax anatomy & histology
- Abstract
Rhodnius amazonicus Almeida et al. (1973) is a triatomine of rare occurrence. This species was found for the third time in Breves city, Pará state, Brazil. Morphometric and morphological studies were carried out on one male and one female. Lent and Wygodzinsky (1979) considered this species as a synonym of R. pictipes, until its revalidation after 23 years by Bérenger and Pluot-Sigwalt (2002). Considering the synonym mentioned above, a comparative study between these two species was performed in order to report the third encounter of this species, and increase the number of morphological characters that distinguish R. amazonicus from R. pictipes. The dorsal side of the head, the dorsal and ventral portions of the thorax, the dorsal, ventral and posterior sides of the female genitalia, eggs and the median process of the pygophore were examined by scanning electronic microscopy (SEM). The head, thorax, abdomen and egg parameters of these two species were also measured. The identification of characters on the head, stridulatory sulcus, mesosternum, metasternum, scutellum, process of urotergite I, external female genitalia, pygophore and eggs made the distinction between R. amazonicus and R. pictipes possible. This study has shown the new characters recorded and described for the first time for R. amazonicus and R. pictipes by SEM here made it possible to confirm the morphological separation between these two species. The morphometric analysis also confirmed that the above two taxa are different at specific level., (Copyright © 2017. Published by Elsevier B.V.)
- Published
- 2017
- Full Text
- View/download PDF
20. The depleted mineralization of the fungicide chlorothalonil derived from loss in soil microbial diversity.
- Author
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de Souza AJ, de Andrade PAM, de Araújo Pereira AP, Andreote FD, Tornisielo VL, and Regitano JB
- Subjects
- Bacteria drug effects, Biodiversity, Soil Microbiology, Bacteria classification, Bacteria metabolism, Biodegradation, Environmental, Fungicides, Industrial metabolism, Nitriles metabolism, Soil chemistry, Soil Pollutants metabolism
- Abstract
There are lack of studies regarding the effects of microbial diversity on specific soil functions, such as pesticides degradation. This study evaluated the role of bacterial community diversity and biochar on chlorothalonil (CTN) degradation, using 'dilution to extinction' approach, PCR-DGGE/16S rRNA gene technique, and radiorespirometry (
14 C-CTN). Biochar and microbial community dilution affected structure of the microbial community. In spite of that, CTN mineralization was slow, but dissipation was very fast (D50 < 1.0 d) due to immediate chemical degradation and formation of non-extractable (bound) residues. However, any depletion on soil microbial diversity strongly affected CTN mineralization, suggesting that this function is related to less abundant but specific microbial groups (CTN degraders) or to soil microbial diversity. The extent of these effects will strongly depend on the compound nature (recalcitrance) and soil matrix/substrate (bioavailability). It can be corroborated by the fact that biochar affected CTN sorption, its bioavailability, and subsequently its mineralization rate in the NS. These data indicate a strong relationship between soil microbial diversity and pesticide degradation, which is an acting form to mitigate xenobiotics accumulation in the environment.- Published
- 2017
- Full Text
- View/download PDF
21. First New World Primate Papillomavirus Identification in the Atlantic Forest, Brazil: Alouatta guariba papillomavirus 1.
- Author
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Silvestre RV, de Souza AJ, Júnior EC, Silva AK, de Mello WA, Nunes MR, Júnior JL, Cardoso JF, de Vasconcelos JM, de Oliveira LF, da Silva SP, da Silva AM, Fries BG, Summa ME, and de Sá LR
- Abstract
We report here the complete genome sequence of the first papillomavirus detected in a New World primate, howler monkey, Alouatta guariba clamitans papillomavirus 1 (AgPV1), from the Atlantic Forest in São Paulo State, Brazil., (Copyright © 2016 Silvestre et al.)
- Published
- 2016
- Full Text
- View/download PDF
22. Comparative genomics of pectinacetylesterases: Insight on function and biology.
- Author
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de Souza AJ and Pauly M
- Subjects
- Acetates metabolism, Arabidopsis enzymology, Pectins metabolism, Phylogeny, Species Specificity, Esterases metabolism, Genomics
- Abstract
Pectin acetylation influences the gelling ability of this important plant polysaccharide for the food industry. Plant apoplastic pectinacetylesterases (PAEs) play a key role in regulating the degree of pectin acetylation and modifying their expression thus represents one way to engineer plant polysaccharides for food applications. Identifying the major active enzymes within the PAE gene family will aid in our understanding of this biological phenomena as well as provide the tools for direct trait manipulation. Using comparative genomics we propose that there is a minimal set of 4 distinct PAEs in plants. Possible functional diversification of the PAE family in the grasses is also explored with the identification of 3 groups of PAE genes specific to grasses.
- Published
- 2015
- Full Text
- View/download PDF
23. Neotropical echinococcosis: second report of Echinococcus vogeli natural infection in its main definitive host, the bush dog (Speothos venaticus).
- Author
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do Carmo Pereira Soares M, Souza de Souza AJ, Pinheiro Malheiros A, Nunes HM, Almeida Carneiro L, Alves MM, Farias da Conceição B, Gomes-Gouvêa MS, and Marins Póvoa M
- Subjects
- Animals, Echinococcosis epidemiology, Echinococcosis parasitology, Echinococcus genetics, Phylogeny, Canidae, Echinococcosis veterinary, Echinococcus classification, Echinococcus isolation & purification
- Abstract
The bush dog (Speothos venaticus) acts as the natural definitive host in the life cycle of Echinococcus vogeli, the causative agent of polycystic hydatid disease, a zoonotic neglected disease in the South America. We report a case of natural infection by Echinococcus vogeli in a bush dog from the Brazilian Amazon, confirmed by the morphological and morphometric examination of adult parasites and their hooks obtained from the small intestine of the canid. Additionally, mitochondrial DNA sequence analysis corroborated these findings. This is the second report of natural infection by E. vogeli in a bush dog., (© 2013.)
- Published
- 2014
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- View/download PDF
24. Identification of two novel cytolysins from the hydrozoan Olindias sambaquiensis (Cnidaria).
- Author
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Junior VH, Zara F, Marangoni S, Toyama Dde O, de Souza AJ, de Oliveira SC, and Toyama MH
- Abstract
Background: Although the hydrozoan Olindias sambaquiensis is the most common jellyfish associated with human envenomation in southeastern and southern Brazil, information about the composition of its venom is rare. Thus, the present study aimed to analyze pharmacological aspects of O. sambaquiensis venom as well as clinical manifestations observed in affected patients. Crude protein extracts were prepared from the tentacles of animals; peptides and proteins were sequenced and submitted to circular dichroism spectroscopy. Creatine kinase, cytotoxicity and hemolytic activity were evaluated by specific methods., Results: We identified two novel cytolysins denominated oshem 1 and oshem 2 from the tentacles of this jellyfish. The cytolysins presented the amino acid sequences NEGKAKCGNTAGSKLTFKSADECTKTGQK (oshem 1) and NNSKAKCGDLAGWSKLTFKSADECTKTGQKS (oshem 2) with respective molecular masses of 3.013 kDa and 3.375 kDa. Circular dichroism revealed that oshem 1 has random coils and small α-helix conformation as main secondary structure whereas oshem 2 presents mainly random coils as its main secondary structure probably due to the presence of W (13) in oshem 2. The hemolysis levels induced by oshem 1 and oshem 2 using a peptide concentration of 0.2 mg/mL were, respectively, 51.7 ± 6.5% and 32.9 ± 8.7% (n = 12 and p ≤ 0.05). Oshem 1 and oshem 2 showed significant myonecrotic activity, evaluated by respective CK level measurements of 1890.4 ± 89 and 1212.5 ± 103 (n = 4 and p ≤ 0.05). In addition, myonecrosis was also evaluated by cell survival, which was measured at 72.4 ± 8.6% and 83.5 ± 6.7% (n = 12 and p ≤ 0.05), respectively. The structural analysis showed that both oshem 1 and oshem 2 should be classified as a small basic hemolytic peptide., Conclusion: The amino acid sequences of two peptides were highly similar while the primary amino acid sequence analysis revealed W (22th) as the most important mutation. Finally oshem 1 and oshem 2 are the first cytolytic peptides isolated from the Olindias sambaquiensis and should probably represent a novel class of cytolytic peptides.
- Published
- 2014
- Full Text
- View/download PDF
25. Gastric lesions in free-ranging black caimans (Melanosuchus niger) associated with Brevimulticaecum species.
- Author
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Cardoso AM, de Souza AJ, Menezes RC, Pereira WL, and Tortelly R
- Subjects
- Animals, Ascaridida Infections pathology, Brazil, Chronic Disease, Granuloma parasitology, Granuloma pathology, Humans, Male, Stomach parasitology, Stomach pathology, Stomach Ulcer parasitology, Stomach Ulcer pathology, Alligators and Crocodiles parasitology, Ascaridida Infections veterinary, Ascaridoidea isolation & purification, Granuloma veterinary, Stomach Ulcer veterinary
- Abstract
The stomachs of 100 free-ranging black caimans (Melanosuchus niger Spix, 1825) from the Mamirauá Sustainable Development Reserve, Amazonas state, Brazil, were examined for parasitism and pathologic lesions. All animals were harvested for human consumption. Ascaridoid nematodes were found in 67 caimans and were identified as Brevimulticaecum sp. These parasites were associated with focally extensive, chronic gastric ulcers and formation of localized intramural granulomas containing nematodes. All caiman were in good nutritional condition, which suggests that effects of gastric nematodiasis on the crocodilian hosts were minimal at the time of slaughter.
- Published
- 2013
- Full Text
- View/download PDF
26. HEV infection in swine from Eastern Brazilian Amazon: evidence of co-infection by different subtypes.
- Author
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de Souza AJ, Gomes-Gouvêa MS, Soares Mdo C, Pinho JR, Malheiros AP, Carneiro LA, dos Santos DR, and Pereira WL
- Subjects
- Animals, Antibodies, Viral blood, Base Sequence, Brazil epidemiology, Coinfection virology, Feces virology, Hepatitis E virology, Hepatitis E virus classification, Hepatitis E virus genetics, Hepatitis E virus isolation & purification, Liver virology, Molecular Sequence Data, Phylogeny, RNA, Viral metabolism, Zoonoses virology, Coinfection veterinary, Hepatitis E veterinary, Hepatitis E virus pathogenicity, RNA, Viral genetics, Swine virology, Swine Diseases virology
- Abstract
Hepatitis E virus (HEV) is a fecal-orally transmitted member of the genus Hepevirus that causes acute hepatitis in humans and is widely distributed throughout the world. Pigs have been reported as the main source of genotypes 3 and 4 infection to humans in non-endemic areas. To investigate HEV infection in pigs from different regions of Pará state (Eastern Brazilian Amazon), we performed serological and molecular analyses of serum, fecal and liver samples from 151 adult pigs slaughtered between April and October 2010 in slaughterhouses in the metropolitan region of Belém, Pará. Among the animals tested, 8.6% (13/151) were positive for anti-HEV IgG but not for anti-HEV IgM. HEV RNA was detected in 4.8% (22/453) of the samples analyzed and 9.9% (15/151) of the animals had at least one positive sample. Phylogenetic analysis showed that all sequences belonged to genotype 3 that were related to human isolates from other non-endemic regions, suggesting that the isolates had zoonotic potential. Subtypes 3c and 3f were simultaneously detected in some pigs, suggesting co-infection by more than one strain and/or the presence of a recombinant virus. These results constitute the first molecular and serologic evidence of swine HEV circulation in the Eastern Brazilian Amazon., (Copyright © 2012 Elsevier Ltd. All rights reserved.)
- Published
- 2012
- Full Text
- View/download PDF
27. Branchiomycosis in tambaqui, Colossoma macropomum (Cuvier), from the eastern Brazilian Amazon.
- Author
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Pereira WL, de Souza AJ, Gabriel AM, Cardoso AM, Monger SG, Seligmann IC, Pereira AC, and Queiroz DK
- Subjects
- Animals, Animals, Zoo, Brazil, Fish Diseases microbiology, Gills microbiology, Gills pathology, Hyphae cytology, Mycoses microbiology, Mycoses pathology, Characiformes microbiology, Fish Diseases pathology, Mycoses veterinary
- Published
- 2012
- Full Text
- View/download PDF
28. Complex transition to cooperative behavior in a structured population model.
- Author
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Miranda L, de Souza AJ, Ferreira FF, and Campos PR
- Subjects
- Computer Simulation, Humans, Biological Evolution, Cooperative Behavior, Emigration and Immigration, Game Theory, Models, Biological, Population Dynamics
- Abstract
Cooperation plays an important role in the evolution of species and human societies. The understanding of the emergence and persistence of cooperation in those systems is a fascinating and fundamental question. Many mechanisms were extensively studied and proposed as supporting cooperation. The current work addresses the role of migration for the maintenance of cooperation in structured populations. This problem is investigated in an evolutionary perspective through the prisoner's dilemma game paradigm. It is found that migration and structure play an essential role in the evolution of the cooperative behavior. The possible outcomes of the model are extinction of the entire population, dominance of the cooperative strategy and coexistence between cooperators and defectors. The coexistence phase is obtained in the range of large migration rates. It is also verified the existence of a critical level of structuring beyond that cooperation is always likely. In resume, we conclude that the increase in the number of demes as well as in the migration rate favor the fixation of the cooperative behavior.
- Published
- 2012
- Full Text
- View/download PDF
29. The extract of the jellyfish Phyllorhiza punctata promotes neurotoxic effects.
- Author
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Carneiro RF, Nascimento NR, Costa PP, Gomes VM, de Souza AJ, de Oliveira SC, Dos Santos Diz Filho EB, Zara FJ, Fonteles MC, de Oliveira Toyama D, Toyama MH, and Santos CF
- Subjects
- Animals, Chickens, Cnidarian Venoms isolation & purification, Lidocaine metabolism, Male, Marine Toxins, Mice, Neuromuscular Junction metabolism, Oxocins isolation & purification, Oxocins toxicity, Phentolamine metabolism, Phospholipases A2 isolation & purification, Phospholipases A2 toxicity, Saxitoxin analogs & derivatives, Saxitoxin isolation & purification, Saxitoxin toxicity, Specimen Handling, Tetrodotoxin isolation & purification, Tetrodotoxin toxicity, Vas Deferens drug effects, Cnidarian Venoms toxicity, Neuromuscular Junction drug effects, Scyphozoa chemistry, Synaptic Transmission drug effects
- Abstract
Phyllorhiza punctata (P. punctata) is a jellyfish native to the southwestern Pacific. Herewith we present the biochemical and pharmacological characterization of an extract of the tentacles of P. punctata. The tentacles were subjected to three freeze-thaw cycles, homogenized, ultrafiltered, precipitated, centrifuged and lyophilized to obtain a crude extract (PHY-N). Paralytic shellfish poisoning compounds such as saxitoxin, gonyautoxin-4, tetrodotoxin and brevetoxin-2, as well as several secretory phospholipase A(2) were identified. PHY-N was tested on autonomic and somatic neuromuscular preparations. In mouse vas deferens, PHY-N induced phasic contractions that reached a peak of 234 ± 34.7% of control twitch height, which were blocked with either 100 μ m of phentolamine or 1 m m of lidocaine. In mouse corpora cavernosa, PHY-N evoked a relaxation response, which was blocked with either L-N(G) -Nitroarginine methyl ester (0.5 m m) or 1 m m of lidocaine. PHY-N (1, 3 and 10 μg ml(-1) ) induced an increase in tonus of the biventer-cervicis neuromuscular preparation that was blocked with pre-treatment of galamine (10 μ m). Administration of 6 mg kg(-1) PHY-N intramuscularly produced death in broilers by spastic paralysis. In conclusion, PHY-N induces nerve depolarization and nonspecifically increases neurotransmitter release., (2011 John Wiley & Sons, Ltd.)
- Published
- 2011
- Full Text
- View/download PDF
30. [Construction and evaluation of educational software on urinary indwelling catheters].
- Author
-
Lopes AC, de Andrade Ferreira A, Fernandes JA, da Silva Morita AB, de Brito Poveda V, and de Souza AJ
- Subjects
- Adolescent, Adult, Humans, Male, Young Adult, Catheters, Indwelling, Computer-Assisted Instruction, Education, Nursing methods, Software, Urinary Catheterization
- Abstract
Since this is an era in which information is open concerning the benefits it brings, the field of nursing informatics earns its moment. The objective of this study was to design educational software for teaching and learning the technique of urinary indwelling catheterization and compare the acquisition of knowledge regarding the technique before and after the implementation of the educational software. This is a descriptive study using a quantitative approach. The pedagogical foundations for designing the software were the theories of Piaget and Vygotsky. The teaching-learning process was evaluated through a questionnaire consisting of 10 multiple choice questions which the 60 participants completed before and after using the software. The results showed the software made significant contributions after its application, thus being very useful in the teaching-learning process.
- Published
- 2011
- Full Text
- View/download PDF
31. Toxicity of hydrolyzed vicilins toward Callosobruchus maculatus and phytopathogenic fungi.
- Author
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Uchôa AF, de Miranda MR, de Souza AJ, Gomes VM, Fernandes KV, Lemos FJ, Oliveira AE, and Xavier-Filho J
- Subjects
- Animals, Chitin metabolism, Chymotrypsin metabolism, Colletotrichum drug effects, Fabaceae chemistry, Fusarium drug effects, Peptide Fragments metabolism, Peptide Fragments pharmacology, Saccharomyces cerevisiae drug effects, Seed Storage Proteins metabolism, Coleoptera, Fungicides, Industrial pharmacology, Insecticides, Seed Storage Proteins pharmacology, Seeds chemistry
- Abstract
Studies have shown that vicilins (7S storage proteins) from seeds were able to bind to the surface of the Callosobruchus maculatus larval midgut and to the peritrophic matrices of the midguts of Diatraea saccharalis and Tenebrio molitor , inhibiting larval development. Vicilins were also shown to inhibit yeast growth and bind to yeast cells through the association with chitin-containing structures. The present work studies the association of peptides from vicilins of genotypes of Vigna unguiculata (susceptible and resistant to bruchid) with acetylated chitin and the toxicity of vicilin fragments and chitin-binding vicilin fragments to C. maculatus and phytopathogenic fungi. Hydrolysis of vicilins with alpha-chymotrypsin results in a complex mixture of fragments that were separated by chitin-affinity chromatography. Chitin-binding peptides from both genotypes were toxic to C. maculatus larvae, and alpha-chymotrypsin-hydrolyzed vicilins were deleterious to the above insect and to Fusarium oxysporum , Colletotrichum musae , and Saccharomyces cerevisiae fungi.
- Published
- 2009
- Full Text
- View/download PDF
32. T cell Ig and mucin domain-1-mediated T cell activation requires recruitment and activation of phosphoinositide 3-kinase.
- Author
-
de Souza AJ, Oak JS, Jordanhazy R, DeKruyff RH, Fruman DA, and Kane LP
- Subjects
- Animals, Antigens, CD metabolism, Antigens, Differentiation, T-Lymphocyte metabolism, CD4-Positive T-Lymphocytes immunology, Enzyme-Linked Immunosorbent Assay, Flow Cytometry, Hepatitis A Virus Cellular Receptor 1, Humans, Interleukin-2 biosynthesis, Jurkat Cells, Lectins, C-Type, Membrane Glycoproteins chemistry, Mice, Mice, Knockout, Phosphatidylinositol 3-Kinases genetics, Phosphorylation, Receptors, Virus chemistry, Transfection, Tyrosine, CD4-Positive T-Lymphocytes metabolism, Lymphocyte Activation immunology, Membrane Glycoproteins metabolism, Phosphatidylinositol 3-Kinases metabolism, Receptors, Virus metabolism, Signal Transduction immunology
- Abstract
Ligation of the transmembrane protein T cell Ig and mucin domain (Tim)-1 can costimulate T cell activation. Agonistic Abs to Tim-1 are also capable of inducing T cell activation without additional stimuli. However, little is known about the biochemical mechanisms underlying T cell stimulation or costimulation through Tim-1. We show that a tyrosine in Tim-1 becomes phosphorylated in a lck-dependent manner, whereupon it can directly recruit p85 adaptor subunits of PI3K. This results in PI3K activation, which is required for Tim-1 function. We also provide genetic evidence that p85 expression is required for optimal Tim-1 function. Thus, we describe a pathway from Tim-1 tyrosine phosphorylation to the PI3K signaling pathway, which appears to be a major effector of Tim-1-mediated T cell activation.
- Published
- 2008
- Full Text
- View/download PDF
33. Cutting edge: inhibition of T cell activation by TIM-2.
- Author
-
Knickelbein JE, de Souza AJ, Tosti R, Narayan P, and Kane LP
- Subjects
- Animals, Calcineurin, Cell Line, Humans, MAP Kinase Kinase Kinases, Mice, NFATC Transcription Factors antagonists & inhibitors, Receptors, Antigen, T-Cell metabolism, Transcription Factor AP-1 antagonists & inhibitors, ras Proteins, Lymphocyte Activation, Membrane Proteins physiology, T-Lymphocytes physiology
- Abstract
T cell Ig and mucin domain protein 2 (TIM-2) has been shown to regulate T cell activation in vitro and T cell-mediated disease in vivo. However, it is still not clear whether TIM-2 acts mainly to augment T cell function or to inhibit it. We have directly examined the function of TIM-2 in murine and human T cell lines. Our results indicate that expression of TIM-2 significantly impairs the induction of NFAT and AP-1 transcriptional reporters by not only TCR ligation but also by the pharmacological stimuli PMA and ionomycin. This does not appear to be due to a general effect on cell viability, and the block in NFAT activation can be bypassed by expression of activated alleles of Ras or calcineurin, or MEK kinase, in the case of AP-1. Thus, our data are consistent with a model whereby TIM-2 inhibits T cell activation.
- Published
- 2006
- Full Text
- View/download PDF
34. Immune regulation by the TIM gene family.
- Author
-
de Souza AJ and Kane LP
- Subjects
- Animals, Hepatitis A Virus Cellular Receptor 1, Humans, Lymphocyte Activation immunology, Membrane Glycoproteins immunology, Receptors, Virus immunology, T-Lymphocytes immunology
- Abstract
Recent studies have demonstrated that proteins of the T cell immunoglobulin and mucin domain (TIM) family are important regulators of immune function. Here we discuss the functional effects of TIM proteins on immune responses, how the effects of TIM proteins may be modulated by interactions with ligands and the limited information available on intracellular signals downstream of TIM proteins.
- Published
- 2006
- Full Text
- View/download PDF
35. T cell Ig and mucin 1 (TIM-1) is expressed on in vivo-activated T cells and provides a costimulatory signal for T cell activation.
- Author
-
de Souza AJ, Oriss TB, O'malley KJ, Ray A, and Kane LP
- Subjects
- Administration, Intranasal, Animals, CD4-Positive T-Lymphocytes cytology, CD4-Positive T-Lymphocytes immunology, Cell Differentiation genetics, Cholera Toxin administration & dosage, Cholera Toxin immunology, Gene Expression Regulation immunology, Hepatitis A Virus Cellular Receptor 1, Humans, Interferon-gamma biosynthesis, Interleukin-4 biosynthesis, Jurkat Cells, Membrane Proteins genetics, Membrane Proteins metabolism, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Ovalbumin administration & dosage, Ovalbumin immunology, Phosphorylation, Phosphotyrosine metabolism, Protein Structure, Tertiary, Signal Transduction genetics, T-Lymphocytes, Helper-Inducer metabolism, Transcription, Genetic immunology, CD4-Positive T-Lymphocytes metabolism, Lymphocyte Activation physiology, Membrane Proteins biosynthesis, Membrane Proteins physiology, Signal Transduction immunology
- Abstract
Polymorphisms in TIM-1, a member of the T cell Ig and mucin (TIM) domain family, are associated with relative susceptibility to the development of T helper 2-dominated immune responses such as in allergic asthma. Recent data have also suggested that ligation of TIM-1 can augment T cell activation. We have found that the TIM-1 protein is expressed on CD4(+) T cells in vivo after intranasal immunization. Ectopic expression of TIM-1 during T cell differentiation results in a significant increase in the number of cells producing IL-4 but not IFN-gamma. Furthermore, TIM-1 expression provides a costimulatory signal that increases transcription from the IL-4 promoter and from isolated nuclear factor of activated T cells/activating protein-1 (NFAT/AP-1) elements. Finally, we provide evidence that TIM-1 can be phosphorylated on tyrosine and that TIM-1 costimulation requires its cytoplasmic tail and the conserved tyrosine within that domain. These results constitute evidence that TIM-1 directly couples to phosphotyrosine-dependent intracellular signaling pathways.
- Published
- 2005
- Full Text
- View/download PDF
36. Fractality of largest clusters and the percolation transition in power-law diluted chains.
- Author
-
Albuquerque SS, de Moura FA, Lyra ML, and de Souza AJ
- Abstract
Relying on the fractal character of the largest clusters at criticality, we employ a finite-size scaling analysis to obtain an accurate phase-diagram of the percolation transition in chains with bond concentration decaying as a power-law on the form 1/ r(1+sigma) . For the particular case of sigma=1, no percolation transition is observed to occur at a finite dilution, in contrast with the finite temperature Kosterlitz-Thouless transition exhibited in Ising and Potts chains with inverse square-law couplings. The fractal dimension of the critical percolation cluster is found to follow distinct dependencies on the decay exponent being numerically fitted by d(f) =0.35+4sigma/5 for 0
- Published
- 2005
- Full Text
- View/download PDF
37. Continuous majority-vote model.
- Author
-
Costa LS and de Souza AJ
- Abstract
We introduce a kinetic irreversible XY model and investigate its dynamic critical behavior through short-time Monte Carlo simulations on square lattices with periodic boundary conditions, starting from an ordered state. We find evidence that this system exhibits a Kosterlitz-Thouless-like phase for low values of the noise parameter. We present results for the correlation function exponent eta for several noise values. We also find that the dynamic critical exponent z is in agreement with the value expected for local update Monte Carlo rules.
- Published
- 2005
- Full Text
- View/download PDF
38. Effect of different intensity light curing modes on microleakage of two resin composite restorations.
- Author
-
Barros GK, Aguiar FH, Santos AJ, and Lovadino JR
- Subjects
- Analysis of Variance, Animals, Cattle, Light, Polymers chemistry, Xenon, Composite Resins radiation effects, Dental Equipment, Dental Leakage, Dental Marginal Adaptation, Dental Restoration, Permanent methods
- Abstract
This in vitro study evaluated the marginal leakage of two resin composites light cured in four different polymerization modes. Standardized Class V cavities were prepared on the buccal enamel surface of 80 sound, freshly extracted inferior bovine incisors. The teeth were randomly divided into eight experimental groups: two resin composites (Z250 Charisma) and four polymerization modes (conventional-680 mW/cm2/30 seconds; soft start-380mW/cm2/10 seconds + 680 mW/cm2/20 seconds; plasma arc curing- 1480mW/cm(2)-3 seconds; combined- 380mW/cm2-10 seconds + 1480mW/cm(2)-3 seconds). All specimens were thermocycled (1,000 cycles at 5 degrees C and 55 degrees C) with a dwell time of one minute at each temperature and immersed in a 2% methylene blue solution for more than 12 hours. The specimens were then washed and prepared for spectrophotometric analysis to quantify the dye concentration. Soft start and combined polymerization modes presented better results and were statistically different from conventional and plasma arc curing polymerization methods for both resin composites. There were no statistical differences between the two resin composites.
- Published
- 2003
39. Influence of treatment with immunosuppressive drugs in mice chronically infected with Trypanosoma cruzi.
- Author
-
Andrade SG, Carneiro Filho A, de Souza AJ, de Lima ES, and Andrade ZA
- Subjects
- Animals, Antibodies, Helminth blood, Azathioprine adverse effects, Betamethasone adverse effects, Brain parasitology, Chronic Disease, Cyclosporine adverse effects, Leukocyte Count, Lymphocyte Count, Mice, Mice, Inbred Strains, Recurrence, Transplantation, Chagas Disease immunology, Disease Models, Animal, Immunosuppressive Agents adverse effects
- Abstract
Latent Trypanosoma cruzi infection may be reactivated in immunosuppressed individuals, with unusual clinical patterns, such as meningoencephalitis, pseudo neoplastic lesions in the central nervous system, and myocarditis with numerous parasites in the heart muscle. To investigate this problem 68 Swiss mice chronically infected with different strains of T. cruzi were treated with different combinations of immunosuppressive drugs (azathioprine, cyclosporine and betamethasone), in such a way as to imitate the situation during post transplantation treatment. Mortality varied from 6 to 25% in treated mice. There were no deaths in untreated controls. Normal mice have been submitted to the same schedules of immunosuppression as controls of treatment and no deaths were registered during treatment. Chronically infected mice showed significant elevation of total number of leukocytes and lymphocytes in comparison with intact controls; a significant decrease in blood leukocytes and lymphocytes occurred post-treatment in two of the treated experimental groups. Exacerbation of myocarditis and myositis and a high incidence of brain lesions, with focal necrosis, granulomatous lesions and glial proliferation even in the absence of parasites were present in immunosuppressed mice but not in infected controls. Although differing in some aspects from Chagas' disease in immunosuppressed humans, the murine model did show some features that resembled it, especially the peculiar pattern of central nervous system involvement.
- Published
- 1997
- Full Text
- View/download PDF
40. Numerical computation of finite size scaling functions: An alternative approach to finite size scaling.
- Author
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Kim JK, de Souza AJ, and Landau DP
- Published
- 1996
- Full Text
- View/download PDF
41. Damage spreading in the Ising model with a microcanonical constraint.
- Author
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Brady Moreira FG, de Souza AJ, and Mariz AM
- Published
- 1996
- Full Text
- View/download PDF
42. Microcanonical simulation of the site-diluted three-dimensional Ising model.
- Author
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de Alcântara AA, de Souza AJ, and Brady Moreira FG
- Published
- 1994
- Full Text
- View/download PDF
43. Microcanonical renormalization-group simulation of Ising systems.
- Author
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de Souza AJ and Brady Moreira FG
- Published
- 1993
- Full Text
- View/download PDF
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