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Your search keyword '"Zentner, Gabriel E."' showing total 244 results
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244 results on '"Zentner, Gabriel E."'

1. Design and testing of a humanized porcine donor for xenotransplantation

Author

Anand, Ranjith P., Layer, Jacob V., Heja, David, Hirose, Takayuki, Lassiter, Grace, Firl, Daniel J., Paragas, Violette B., Akkad, Adam, Chhangawala, Sagar, Colvin, Robert B., Ernst, Russell J., Esch, Nicholas, Getchell, Kristen, Griffin, Alexandra K., Guo, Xiaoyun, Hall, Katherine C., Hamilton, Paula, Kalekar, Lokesh A., Kan, Yinan, Karadagi, Ahmad, Li, Feng, Low, Susan C., Matheson, Rudy, Nehring, Claudia, Otsuka, Ryo, Pandelakis, Matthew, Policastro, Robert A., Pols, Rebecca, Queiroz, Luis, Rosales, Ivy A., Serkin, William T., Stiede, Kathryn, Tomosugi, Toshihide, Xue, Yongqiang, Zentner, Gabriel E., Angeles-Albores, David, Chris Chao, J., Crabtree, Juliet N., Harken, Sierra, Hinkle, Nicole, Lemos, Tania, Li, Mailin, Pantano, Lorena, Stevens, Denise, Subedar, Omar D., Tan, Xiaoqing, Yin, Shiyi, Anwar, Imran J., Aufhauser, David, Capuano, Saverio, Kaufman, Dixon B., Knechtle, Stuart J., Kwun, Jean, Shanmuganayagam, Dhanansayan, Markmann, James F., Church, George M., Curtis, Mike, Kawai, Tatsuo, Youd, Michele E., and Qin, Wenning

Published
2023
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2. Renal L-2-hydroxyglutarate dehydrogenase activity promotes hypoxia tolerance and mitochondrial metabolism in Drosophila melanogaster

Author

Mahmoudzadeh, Nader H., Heidarian, Yasaman, Tourigny, Jason P., Fitt, Alexander J., Beebe, Katherine, Li, Hongde, Luhur, Arthur, Buddika, Kasun, Mungcal, Liam, Kundu, Anirban, Policastro, Robert A., Brinkley, Garrett J., Zentner, Gabriel E., Nemkov, Travis, Pepin, Robert, Chawla, Geetanjali, Sudarshan, Sunil, Rodan, Aylin R., D'Alessandro, Angelo, and Tennessen, Jason M.

Published
2024
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3. Sufficient principal component regression for pattern discovery in transcriptomic data

Author

Ding, Lei, Zentner, Gabriel E., and McDonald, Daniel J.

Subjects
Statistics - Methodology
Abstract

Methods for global measurement of transcript abundance such as microarrays and RNA-Seq generate datasets in which the number of measured features far exceeds the number of observations. Extracting biologically meaningful and experimentally tractable insights from such data therefore requires high-dimensional prediction. Existing sparse linear approaches to this challenge have been stunningly successful, but some important issues remain. These methods can fail to select the correct features, predict poorly relative to non-sparse alternatives, or ignore any unknown grouping structures for the features. We propose a method called SuffPCR that yields improved predictions in high-dimensional tasks including regression and classification, especially in the typical context of omics with correlated features. SuffPCR first estimates sparse principal components and then estimates a linear model on the recovered subspace. Because the estimated subspace is sparse in the features, the resulting predictions will depend on only a small subset of genes. SuffPCR works well on a variety of simulated and experimental transcriptomic data, performing nearly optimally when the model assumptions are satisfied. We also demonstrate near-optimal theoretical guarantees., Comment: 28 pages, 9 figures, 10 tables

Published
2021
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11. Supplementary Table 7 from BORIS Expression in Ovarian Cancer Precursor Cells Alters the CTCF Cistrome and Enhances Invasiveness through GALNT14

Author

Hillman, Joanna C., primary, Pugacheva, Elena M., primary, Barger, Carter J., primary, Sribenja, Sirinapa, primary, Rosario, Spencer, primary, Albahrani, Mustafa, primary, Truskinovsky, Alexander M., primary, Stablewski, Aimee, primary, Liu, Song, primary, Loukinov, Dmitri I., primary, Zentner, Gabriel E., primary, Lobanenkov, Victor V., primary, Karpf, Adam R., primary, and Higgins, Michael J., primary

Published
2023
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12. Supplementary Table 4 from BORIS Expression in Ovarian Cancer Precursor Cells Alters the CTCF Cistrome and Enhances Invasiveness through GALNT14

Author

Hillman, Joanna C., primary, Pugacheva, Elena M., primary, Barger, Carter J., primary, Sribenja, Sirinapa, primary, Rosario, Spencer, primary, Albahrani, Mustafa, primary, Truskinovsky, Alexander M., primary, Stablewski, Aimee, primary, Liu, Song, primary, Loukinov, Dmitri I., primary, Zentner, Gabriel E., primary, Lobanenkov, Victor V., primary, Karpf, Adam R., primary, and Higgins, Michael J., primary

Published
2023
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13. Supplementary Materials and Methods from Lysine-Specific Demethylase 1 Mediates AKT Activity and Promotes Epithelial-to-Mesenchymal Transition in PIK3CA-Mutant Colorectal Cancer

Author

Miller, Samuel A., primary, Policastro, Robert A., primary, Savant, Sudha S., primary, Sriramkumar, Shruthi, primary, Ding, Ning, primary, Lu, Xiaoyu, primary, Mohammad, Helai P., primary, Cao, Sha, primary, Kalin, Jay H., primary, Cole, Philip A., primary, Zentner, Gabriel E., primary, and O'Hagan, Heather M., primary

Published
2023
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14. Supplementary Table 5 from BORIS Expression in Ovarian Cancer Precursor Cells Alters the CTCF Cistrome and Enhances Invasiveness through GALNT14

Author

Hillman, Joanna C., primary, Pugacheva, Elena M., primary, Barger, Carter J., primary, Sribenja, Sirinapa, primary, Rosario, Spencer, primary, Albahrani, Mustafa, primary, Truskinovsky, Alexander M., primary, Stablewski, Aimee, primary, Liu, Song, primary, Loukinov, Dmitri I., primary, Zentner, Gabriel E., primary, Lobanenkov, Victor V., primary, Karpf, Adam R., primary, and Higgins, Michael J., primary

Published
2023
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15. Supplemental Figure Legends 1-9 from BORIS Expression in Ovarian Cancer Precursor Cells Alters the CTCF Cistrome and Enhances Invasiveness through GALNT14

Author

Hillman, Joanna C., primary, Pugacheva, Elena M., primary, Barger, Carter J., primary, Sribenja, Sirinapa, primary, Rosario, Spencer, primary, Albahrani, Mustafa, primary, Truskinovsky, Alexander M., primary, Stablewski, Aimee, primary, Liu, Song, primary, Loukinov, Dmitri I., primary, Zentner, Gabriel E., primary, Lobanenkov, Victor V., primary, Karpf, Adam R., primary, and Higgins, Michael J., primary

Published
2023
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16. Supplementary Figures 1-7 and Table S1 from Lysine-Specific Demethylase 1 Mediates AKT Activity and Promotes Epithelial-to-Mesenchymal Transition in PIK3CA-Mutant Colorectal Cancer

Author

Miller, Samuel A., primary, Policastro, Robert A., primary, Savant, Sudha S., primary, Sriramkumar, Shruthi, primary, Ding, Ning, primary, Lu, Xiaoyu, primary, Mohammad, Helai P., primary, Cao, Sha, primary, Kalin, Jay H., primary, Cole, Philip A., primary, Zentner, Gabriel E., primary, and O'Hagan, Heather M., primary

Published
2023
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17. Supplementary Table 1 from BORIS Expression in Ovarian Cancer Precursor Cells Alters the CTCF Cistrome and Enhances Invasiveness through GALNT14

Author

Hillman, Joanna C., primary, Pugacheva, Elena M., primary, Barger, Carter J., primary, Sribenja, Sirinapa, primary, Rosario, Spencer, primary, Albahrani, Mustafa, primary, Truskinovsky, Alexander M., primary, Stablewski, Aimee, primary, Liu, Song, primary, Loukinov, Dmitri I., primary, Zentner, Gabriel E., primary, Lobanenkov, Victor V., primary, Karpf, Adam R., primary, and Higgins, Michael J., primary

Published
2023
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18. Supplementary Data from BORIS Expression in Ovarian Cancer Precursor Cells Alters the CTCF Cistrome and Enhances Invasiveness through GALNT14

Author

Hillman, Joanna C., primary, Pugacheva, Elena M., primary, Barger, Carter J., primary, Sribenja, Sirinapa, primary, Rosario, Spencer, primary, Albahrani, Mustafa, primary, Truskinovsky, Alexander M., primary, Stablewski, Aimee, primary, Liu, Song, primary, Loukinov, Dmitri I., primary, Zentner, Gabriel E., primary, Lobanenkov, Victor V., primary, Karpf, Adam R., primary, and Higgins, Michael J., primary

Published
2023
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19. Supplementary Table 3 from BORIS Expression in Ovarian Cancer Precursor Cells Alters the CTCF Cistrome and Enhances Invasiveness through GALNT14

Author

Hillman, Joanna C., primary, Pugacheva, Elena M., primary, Barger, Carter J., primary, Sribenja, Sirinapa, primary, Rosario, Spencer, primary, Albahrani, Mustafa, primary, Truskinovsky, Alexander M., primary, Stablewski, Aimee, primary, Liu, Song, primary, Loukinov, Dmitri I., primary, Zentner, Gabriel E., primary, Lobanenkov, Victor V., primary, Karpf, Adam R., primary, and Higgins, Michael J., primary

Published
2023
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20. Data from BORIS Expression in Ovarian Cancer Precursor Cells Alters the CTCF Cistrome and Enhances Invasiveness through GALNT14

Author

Hillman, Joanna C., primary, Pugacheva, Elena M., primary, Barger, Carter J., primary, Sribenja, Sirinapa, primary, Rosario, Spencer, primary, Albahrani, Mustafa, primary, Truskinovsky, Alexander M., primary, Stablewski, Aimee, primary, Liu, Song, primary, Loukinov, Dmitri I., primary, Zentner, Gabriel E., primary, Lobanenkov, Victor V., primary, Karpf, Adam R., primary, and Higgins, Michael J., primary

Published
2023
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21. Supplementary Table 2 from BORIS Expression in Ovarian Cancer Precursor Cells Alters the CTCF Cistrome and Enhances Invasiveness through GALNT14

Author

Hillman, Joanna C., primary, Pugacheva, Elena M., primary, Barger, Carter J., primary, Sribenja, Sirinapa, primary, Rosario, Spencer, primary, Albahrani, Mustafa, primary, Truskinovsky, Alexander M., primary, Stablewski, Aimee, primary, Liu, Song, primary, Loukinov, Dmitri I., primary, Zentner, Gabriel E., primary, Lobanenkov, Victor V., primary, Karpf, Adam R., primary, and Higgins, Michael J., primary

Published
2023
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22. Supplementary Table 6 from BORIS Expression in Ovarian Cancer Precursor Cells Alters the CTCF Cistrome and Enhances Invasiveness through GALNT14

Author

Hillman, Joanna C., primary, Pugacheva, Elena M., primary, Barger, Carter J., primary, Sribenja, Sirinapa, primary, Rosario, Spencer, primary, Albahrani, Mustafa, primary, Truskinovsky, Alexander M., primary, Stablewski, Aimee, primary, Liu, Song, primary, Loukinov, Dmitri I., primary, Zentner, Gabriel E., primary, Lobanenkov, Victor V., primary, Karpf, Adam R., primary, and Higgins, Michael J., primary

Published
2023
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23. Data from Lysine-Specific Demethylase 1 Mediates AKT Activity and Promotes Epithelial-to-Mesenchymal Transition in PIK3CA-Mutant Colorectal Cancer

Author

Miller, Samuel A., primary, Policastro, Robert A., primary, Savant, Sudha S., primary, Sriramkumar, Shruthi, primary, Ding, Ning, primary, Lu, Xiaoyu, primary, Mohammad, Helai P., primary, Cao, Sha, primary, Kalin, Jay H., primary, Cole, Philip A., primary, Zentner, Gabriel E., primary, and O'Hagan, Heather M., primary

Published
2023
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38. Genetic and epigenetic regulation of skeletal muscle ribosome biogenesis with exercise

Author

Figueiredo, Vandré C., primary, Wen, Yuan, additional, Alkner, Björn, additional, Fernandez‐Gonzalo, Rodrigo, additional, Norrbom, Jessica, additional, Vechetti, Ivan J., additional, Valentino, Taylor, additional, Mobley, C. Brooks, additional, Zentner, Gabriel E., additional, Peterson, Charlotte A., additional, McCarthy, John J., additional, Murach, Kevin A., additional, and von Walden, Ferdinand, additional

Published
2021
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44. Genetic and Epigenetic Regulation of Skeletal Muscle Ribosome Biogenesis with Exercise

Author

Figueiredo, Vandré C., primary, Wen, Yuan, additional, Alkner, Björn, additional, Fernandez-Gonzalo, Rodrigo, additional, Norrbom, Jessica, additional, Vechetti, Ivan J., additional, Valentino, Taylor, additional, Mobley, C. Brooks, additional, Zentner, Gabriel E., additional, Peterson, Charlotte A., additional, McCarthy, John J., additional, Murach, Kevin A., additional, and von Walden, Ferdinand, additional

Published
2020
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48. Lysine-Specific Demethylase 1 Mediates AKT Activity and Promotes Epithelial-to-Mesenchymal Transition in PIK3CA-Mutant Colorectal Cancer

Author

Miller, Samuel A., primary, Policastro, Robert A., additional, Savant, Sudha S., additional, Sriramkumar, Shruthi, additional, Ding, Ning, additional, Lu, Xiaoyu, additional, Mohammad, Helai P., additional, Cao, Sha, additional, Kalin, Jay H., additional, Cole, Philip A., additional, Zentner, Gabriel E., additional, and O'Hagan, Heather M., additional

Published
2020
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