8 results on '"Zarnt T"'
Search Results
2. Time-dependent inhibition of peptidylprolyl cis-trans-isomerases by FK506 is probably due to cis-trans isomerization of the inhibitor's imide bond
- Author
-
Zarnt, T, primary, Lang, K, additional, Burtscher, H, additional, and Fischer, G, additional
- Published
- 1995
- Full Text
- View/download PDF
3. Autocatalytic folding of the folding catalyst FKBP12.
- Author
-
Scholz, C, Zarnt, T, Kern, G, Lang, K, Burtscher, H, Fischer, G, and Schmid, F X
- Abstract
Prolyl isomerases are folding enzymes and thus have the potential to catalyze their own folding. We show here that the folding of cytosolic FKBP12 (FK 506 binding protein) is an autocatalytic process both for the mature protein and for a fusion protein with an amino-terminal extension of 16 residues. Native FKBP contains seven trans-prolyl peptide bonds, and the cis-to-trans isomerizations of some or all of them constitute the slow, rate-limiting events in folding. The rate of an autocatalytic reaction increases with reactant concentration, because the product catalyzes its own formation. Accordingly, the folding of the fusion protein was more than 10-fold accelerated when the protein concentration was increased from 0.05 microM to 10 microM. At high concentrations of both forms of FKBP12 autocatalysis was very efficient, and the observed folding rate seemed to approach the rate of the fast direct folding reaction of the protein molecules with the correct (all trans) peptidyl-prolyl bond conformation.
- Published
- 1996
4. Chaperone-aided in vitro renaturation of an engineered E1 envelope protein for detection of anti-Rubella virus IgG antibodies.
- Author
-
Scholz C, Thirault L, Schaarschmidt P, Zarnt T, Faatz E, Engel AM, Upmeier B, Bollhagen R, Eckert B, and Schmid FX
- Subjects
- Amino Acid Sequence, Chromatography, Gel, Circular Dichroism, Disulfides metabolism, Gene Expression, Molecular Sequence Data, Peptide Fragments immunology, Peptide Fragments metabolism, Protein Denaturation, Protein Engineering, Rubella virus chemistry, Rubella virus genetics, Solubility, Viral Envelope Proteins chemistry, Viral Envelope Proteins genetics, Antibodies, Viral immunology, Immunoglobulin G immunology, Molecular Chaperones metabolism, Rubella virus immunology, Rubella virus metabolism, Viral Envelope Proteins immunology, Viral Envelope Proteins metabolism
- Abstract
The envelope glycoproteins of Rubella virus, E1 and E2, mediate cell tropism, and E1 in particular plays a pivotal role in the fusion of the virus with the endosomal membrane. Both are the prime targets of the humoral immune response. Recombinant variants of the E1 ectodomain as well as E1 antigen preparations from virus lysates are commonly used to detect anti-Rubella immunoglobulins in human sera. Hitherto, recombinant E1 for diagnostic applications has been produced chiefly in eukaryotic expression systems. Here, we report the high-yield overproduction of an engineered E1 ectodomain in the Escherichia coli cytosol and its simple and convenient renaturation into a highly soluble and immunoreactive conformation. C-Terminal fusion to one or two units of the E. coli chaperone SlyD enhances expression, facilitates in vitro refolding, and improves the overall solubility of Rubella E1. As part of this fusion protein, the E1 ectodomain fragment of residues 201-432 adopts an immunoreactive fold, providing a promising tool for the sensitive and specific detection of anti-E1 IgG in Rubella serology. Two disulfide bonds in the membrane-adjacent part of the E1 ectodomain are sufficient to generate conformations with a high and specific antigenicity. The covalently attached chaperone modules do not impair antibody recognition and binding of Rubella E1 when assessed in a heterogeneous immunoassay. SlyD and related folding helpers are apparently generic tools for the expression and refolding of otherwise unavailable proteins of diagnostic or medical importance.
- Published
- 2008
- Full Text
- View/download PDF
5. Increased backbone flexibility in threonine45-phosphorylated hirudin upon pH change.
- Author
-
Kipping M, Zarnt T, Kiessig S, Reimer U, Fischer G, and Bayer P
- Subjects
- Amino Acid Sequence, Animals, Anions metabolism, Deuterium chemistry, Hydrogen Bonding, Hydrogen-Ion Concentration, Molecular Sequence Data, Nuclear Magnetic Resonance, Biomolecular, Organophosphates metabolism, Peptide Fragments metabolism, Phosphorylation, Protein Conformation, Protons, Hirudins chemistry, Hirudins metabolism, Threonine metabolism
- Abstract
Protein phosphorylation on serine/threonine side chains represents a major regulatory event in the posttranslational control of protein functionality, where it is thought to operate at the level of structural changes in the polypeptide chain. However, key questions about molecular aspects of phosphate ester induced conformational alterations remain open. Among these concerns are the radius of action of the phosphate ester group, its effective ionic state, and its interplay with distinct bonds of the polypeptide chain. Primarily to define short-range effects upon threonine phosphorylation, the native 65 amino acid protein hirudin, conformationally restrained by a proline flanking the pThr(45) site and three intramolecular disulfide bonds, was structurally characterized in both the phosphorylated and the unphosphorylated state in solution. Circular dichroism and hydrogen exchange experiments (MALDI-TOF) showed that structural changes were caused by Thr(45)-Pro(46) phosphorylation only when the phosphate ester group was in its dianionic state. The spatial arrangement of the amino acids, monitored by 1H NMR spectroscopy, appears to be affected within a radius of about 10 A around the pThr(45)-OgammaH, with phosphorylation resulting in a loss of structure and increased flexibility within a segment of at least seven amino acid residues. Thus, the transition from the monoanionic to the dianionic phosphate group over the pH range 5.2-8.5 represents a general phosphorylation-dependent conformational switch operating at physiological pH values.
- Published
- 2001
- Full Text
- View/download PDF
6. The mode of action of peptidyl prolyl cis/trans isomerases in vivo: binding vs. catalysis.
- Author
-
Fischer G, Tradler T, and Zarnt T
- Subjects
- Binding Sites, Carrier Proteins metabolism, DNA-Binding Proteins metabolism, Heat-Shock Proteins metabolism, Humans, Mutagenesis, Site-Directed, Proline chemistry, Protein Binding, Protein Conformation, Structure-Activity Relationship, Tacrolimus Binding Proteins, Peptidylprolyl Isomerase metabolism
- Abstract
Polypeptides often display proline-mediated conformational substates that are prone to isomer-specific recognition and function. Both possibilities can be of biological significance. Distinct families of peptidyl prolyl cis/trans isomerases (PPIases) evolved proved to be highly specific for proline moieties arranged in a special context of subsites. Structural and chemical features of molecules specifically bound to the active site of PPIases served to improve catalysis of prolyl isomerization rather than ground state binding. For example, results inferred from receptor Ser/Thr or Tyr phosphorylation in the presence of site-directed FKBP12 mutant proteins provided evidence for the crucial role of the enzymatic activity in downregulating function of FKBP12.
- Published
- 1998
- Full Text
- View/download PDF
7. Modular structure of the trigger factor required for high activity in protein folding.
- Author
-
Zarnt T, Tradler T, Stoller G, Scholz C, Schmid FX, and Fischer G
- Subjects
- Amino Acid Isomerases genetics, Amino Acid Isomerases metabolism, Carrier Proteins genetics, Carrier Proteins metabolism, Catalysis, Circular Dichroism, DNA-Binding Proteins, Escherichia coli enzymology, Heat-Shock Proteins, Kinetics, Peptide Fragments chemistry, Peptide Fragments isolation & purification, Peptidylprolyl Isomerase, Protein Denaturation, Recombinant Fusion Proteins, Spectrometry, Fluorescence, Tacrolimus Binding Proteins, Urea pharmacology, Amino Acid Isomerases chemistry, Carrier Proteins chemistry, Protein Folding
- Abstract
The Escherichia coli trigger factor is a peptidyl-prolyl cis/trans isomerase (PPIase) which catalyzes proline-limited protein folding extremely well. It has been found associated with nascent protein chains as well as with the chaperone GroEL. The trigger factor utilizes protein regions outside the central catalytic domain for catalyzing refolding of unfolded proteins efficiently. Here we produced several fragments which encompass individual domains or combinations of the middle FKBP-like domain (M) with the N-terminal (N) and C-terminal (C) regions, respectively. These fragments appear to be stably folded. They show ordered structure and cooperative urea-induced unfolding transitions, and the far-UV CD spectrum of the intact trigger factor is well represented by the sum of the spectra of the fragments. This suggests that the native trigger factor shows a modular structure, which is composed of three fairly independent folding units. In the intact protein there is a slight mutual stabilization of these units. The high enzymatic activity in protein folding could not be restored by fusing alternatively the N or the C-terminal regions to the catalytic domain (in NM and MC constructs, respectively). Surprisingly, the high folding activity of the intact trigger factor has been regained partially by functional complementation of the overlapping NM and MC constructs., (Copyright 1997 Academic Press Limited.)
- Published
- 1997
- Full Text
- View/download PDF
8. Cooperation of enzymatic and chaperone functions of trigger factor in the catalysis of protein folding.
- Author
-
Scholz C, Stoller G, Zarnt T, Fischer G, and Schmid FX
- Subjects
- Amino Acid Isomerases antagonists & inhibitors, Binding Sites, Binding, Competitive, Carrier Proteins antagonists & inhibitors, Catalysis, Chaperonins antagonists & inhibitors, Escherichia coli enzymology, Humans, Isomerism, Kinetics, Peptidylprolyl Isomerase, Ribonuclease T1 metabolism, Amino Acid Isomerases physiology, Carrier Proteins physiology, Chaperonins physiology, Protein Folding
- Abstract
The trigger factor of Escherichia coli is a prolyl isomerase and accelerates proline-limited steps in protein folding with a very high efficiency. It associates with nascent polypeptide chains at the ribosome and is thought to catalyse the folding of newly synthesized proteins. In its enzymatic mechanism the trigger factor follows the Michaelis-Menten equation. The unusually high folding activity of the trigger factor originates from its tight binding to the folding protein substrate, as reflected in the low Km value of 0.7 microM. In contrast, the catalytic constant kcat is small and shows a value of 1.3 s(-1) at 15 degrees C. An unfolded protein inhibits the trigger factor in a competitive fashion. The isolated catalytic domain of the trigger factor retains the full prolyl isomerase activity towards short peptides, but in a protein folding reaction its activity is 800-fold reduced and no longer inhibited by an unfolded protein. Unlike the prolyl isomerase site, the polypeptide binding site obviously extends beyond the FKBP domain. Together, this suggests that the good substrate binding, i.e. the chaperone property, of the intact trigger factor is responsible for its high efficiency as a catalyst of proline-limited protein folding.
- Published
- 1997
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.