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1. Ovarian cancer pathology characteristics as predictors of variant pathogenicity in BRCA1 and BRCA2

Author: O’Mahony, Denise G, Ramus, Susan J, Southey, Melissa C, Meagher, Nicola S, Hadjisavvas, Andreas, John, Esther M, Hamann, Ute, Imyanitov, Evgeny N, Andrulis, Irene L, Sharma, Priyanka, Daly, Mary B, Hake, Christopher R, Weitzel, Jeffrey N, Jakubowska, Anna, Godwin, Andrew K, Arason, Adalgeir, Bane, Anita, Simard, Jacques, Soucy, Penny, Caligo, Maria A, Mai, Phuong L, Claes, Kathleen BM, Teixeira, Manuel R, Chung, Wendy K, Lazaro, Conxi, Hulick, Peter J, Toland, Amanda E, Pedersen, Inge Sokilde, Neuhausen, Susan L, Vega, Ana, de la Hoya, Miguel, Nevanlinna, Heli, Dhawan, Mallika, Zampiga, Valentina, Danesi, Rita, Varesco, Liliana, Gismondi, Viviana, Vellone, Valerio Gaetano, James, Paul A, Janavicius, Ramunas, Nikitina-Zake, Liene, Nielsen, Finn Cilius, van Overeem Hansen, Thomas, Pejovic, Tanja, Borg, Ake, Rantala, Johanna, Offit, Kenneth, Montagna, Marco, Nathanson, Katherine L, Domchek, Susan M, Osorio, Ana, García, María J, Karlan, Beth Y, De Fazio, Anna, Bowtell, David, McGuffog, Lesley, Leslie, Goska, Parsons, Michael T, Dörk, Thilo, Speith, Lisa-Marie, dos Santos, Elizabeth Santana, da Costa, Alexandre André BA, Radice, Paolo, Peterlongo, Paolo, Papi, Laura, Engel, Christoph, Hahnen, Eric, Schmutzler, Rita K, Wappenschmidt, Barbara, Easton, Douglas F, Tischkowitz, Marc, Singer, Christian F, Tan, Yen Yen, Whittemore, Alice S, Sieh, Weiva, Brenton, James D, Yannoukakos, Drakoulis, Fostira, Florentia, Konstantopoulou, Irene, Soukupova, Jana, Vocka, Michal, Chenevix-Trench, Georgia, Pharoah, Paul DP, Antoniou, Antonis C, Goldgar, David E, Spurdle, Amanda B, and Michailidou, Kyriaki
Subjects: Biomedical and Clinical Sciences, Oncology and Carcinogenesis, Ovarian Cancer, Cancer, Breast Cancer, Women's Health, Rare Diseases, Genetics, 2.1 Biological and endogenous factors, Good Health and Well Being, Humans, Female, Virulence, BRCA1 Protein, BRCA2 Protein, Ovarian Neoplasms, Genetic Predisposition to Disease, Breast Neoplasms, HEBON Investigators, GEMO Study Collaborators, AOCS Group, CZECANCA Consortium, Consortium of Investigators of Modifiers of BRCA1/2, Evidence-based Network for the Interpretation of Germline Mutant Alleles Consortium, Public Health and Health Services, Oncology & Carcinogenesis, Oncology and carcinogenesis
Abstract: BackgroundThe distribution of ovarian tumour characteristics differs between germline BRCA1 and BRCA2 pathogenic variant carriers and non-carriers. In this study, we assessed the utility of ovarian tumour characteristics as predictors of BRCA1 and BRCA2 variant pathogenicity, for application using the American College of Medical Genetics and the Association for Molecular Pathology (ACMG/AMP) variant classification system.MethodsData for 10,373 ovarian cancer cases, including carriers and non-carriers of BRCA1 or BRCA2 pathogenic variants, were collected from unpublished international cohorts and consortia and published studies. Likelihood ratios (LR) were calculated for the association of ovarian cancer histology and other characteristics, with BRCA1 and BRCA2 variant pathogenicity. Estimates were aligned to ACMG/AMP code strengths (supporting, moderate, strong).ResultsNo histological subtype provided informative ACMG/AMP evidence in favour of BRCA1 and BRCA2 variant pathogenicity. Evidence against variant pathogenicity was estimated for the mucinous and clear cell histologies (supporting) and borderline cases (moderate). Refined associations are provided according to tumour grade, invasion and age at diagnosis.ConclusionsWe provide detailed estimates for predicting BRCA1 and BRCA2 variant pathogenicity based on ovarian tumour characteristics. This evidence can be combined with other variant information under the ACMG/AMP classification system, to improve classification and carrier clinical management.
Published: 2023

2. Comprehensive analysis of DNA damage repair genes reveals pathogenic variants beyond BRCA and suggests the need for extensive genetic testing in pancreatic cancer

Author: Rapposelli, Ilario Giovanni, Zampiga, Valentina, Cangini, Ilaria, Arcangeli, Valentina, Ravegnani, Mila, Valgiusti, Martina, Pini, Sara, Tamberi, Stefano, Bartolini, Giulia, Passardi, Alessandro, Martinelli, Giovanni, Calistri, Daniele, Frassineti, Giovanni Luca, Falcini, Fabio, and Danesi, Rita
Published: 2021
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3. Atypical cancer risk profile in carriers of Italian founder BRCA1 variant p.His1673del: Implications for classification and clinical management.

Author: Innella, Giovanni, Fortuno, Cristina, Caleca, Laura, Feng, Bing‐Jian, Carroll, Courtney, Parsons, Michael T., Miccoli, Sara, Montagna, Marco, Calistri, Daniele, Cortesi, Laura, Pasini, Barbara, Manoukian, Siranoush, Giachino, Daniela, Matricardi, Laura, Foti, Maria Cristina, Zampiga, Valentina, Piombino, Claudia, Barbieri, Elena, Lutati, Francesca Vignolo, and Azzolini, Jacopo
Subjects: UTERINE cancer, DISEASE risk factors, BREAST cancer, MAXIMUM likelihood statistics, CANCER diagnosis, OVARIAN cancer
Abstract: Background: BRCA1:c.5017_5019del (p.His1673del) is a founder variant relatively frequent in Northern Italy. Despite previous suggestion of pathogenicity, variant classification in public databases is still conflicting, needing additional evidence. Methods: Maximum likelihood penetrance of breast/ovarian and other cancer types was estimated using full pedigree data from 53 informative Italian families. The effect of the variant on BRCA1‐ABRAXAS1 interaction was assessed using a GFP‐fragment reassembly‐based PPI assay. Results were combined with additional data from multiple sources to classify the variant according to ACMG/AMP classification rules specified for BRCA1/2. Results: Variant‐carriers displayed increased risk for ovarian cancer (HR = 33.0, 95% CI = 7.0–155.0; cumulative risk at age 70 = 27.6%, 95% CI = 12.6–40.0%) but not for breast cancer (HR = 0.7, 95% CI = 0.2–2.2). An increased risk of uterine cancer (HR = 8.0, 95% CI = 1.03–61.6) emerged, warranting further evaluation. Likelihood‐ratio in favor of pathogenicity was 98898642.82 under assumption of standard BRCA1 breast and ovarian penetrance, and 104240832.84 after excluding breast cancer diagnoses (based on penetrance results). Functional analysis demonstrated that the variant abrogates the BRCA1‐ABRAXAS1 binding, supporting the PS3 code assignment within the ACMG/AMP rule‐based model. Collectively, these findings allowed to classify the variant as pathogenic. Conclusion: Pathogenicity of BRCA1:c.5017_5019del(p.His1673del) has been confirmed; however, breast cancer risk in Italian families is not increased, unlike in families from other countries and in carriers of most BRCA1 pathogenic variants. The knowledge of atypical risk profiles for this and other variants will pave the way for personalized management based on specific genotype. [ABSTRACT FROM AUTHOR]
Published: 2024
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4. Identification of a novel large EPCAM-MSH2 duplication, concurrently with LOHs in chromosome 20 and X, in a family with Lynch syndrome

Author: Pirini, Francesca, Tedaldi, Gianluca, Danesi, Rita, Cangini, Ilaria, Tumedei, Maria Maddalena, Ferrari, Anna, Vitali, Silvia, De Maio, Giulia, Terragna, Carolina, Solli, Vincenza, Tebaldi, Michela, Puccetti, Maurizio, Zampiga, Valentina, Ravegnani, Mila, Ulivi, Paola, Falcini, Fabio, Martinelli, Giovanni, and Calistri, Daniele
Published: 2019
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5. Impact of the time interval between primary or interval surgery and adjuvant chemotherapy in ovarian cancer patients

Author: Farolfi, Alberto, primary, Petracci, Elisabetta, additional, Gurioli, Giorgia, additional, Tedaldi, Gianluca, additional, Casanova, Claudia, additional, Arcangeli, Valentina, additional, Amadori, Andrea, additional, Rosati, Marta, additional, Stefanetti, Marco, additional, Burgio, Salvatore Luca, additional, Cursano, Maria Concetta, additional, Lolli, Cristian, additional, Zampiga, Valentina, additional, Cangini, Ilaria, additional, Schepisi, Giuseppe, additional, and De Giorgi, Ugo, additional
Published: 2023
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6. Figure 1 from ENIGMA CHEK2gether Project: A Comprehensive Study Identifies Functionally Impaired CHEK2 Germline Missense Variants Associated with Increased Breast Cancer Risk

Author: Stolarova, Lenka, primary, Kleiblova, Petra, primary, Zemankova, Petra, primary, Stastna, Barbora, primary, Janatova, Marketa, primary, Soukupova, Jana, primary, Achatz, Maria Isabel, primary, Ambrosone, Christine, primary, Apostolou, Paraskevi, primary, Arun, Banu K., primary, Auer, Paul, primary, Barnard, Mollie, primary, Bertelsen, Birgitte, primary, Matsuda, Koichi, primary, Kamatani, Yoichiro, primary, Morisaki, Takayuki, primary, Nagai, Akiko, primary, Muto, Kaori, primary, Murakami, Yoshinori, primary, Furukawa, Yoichi, primary, Yamanashi, Yuji, primary, Nakamura, Yusuke, primary, Mushiroda, Taisei, primary, Momozawa, Yukihide, primary, Tanaka, Toshihiro, primary, Ohnishi, Yozo, primary, Kubo, Michiaki, primary, Higashiue, Shinichi, primary, Kobayashi, Shuzo, primary, Minami, Shiro, primary, Yamaguhci, Hiroki, primary, Arai, Hajime, primary, Yamaji, Ken, primary, Okazaki, Yasushi, primary, Asai, Satoshi, primary, Takahashi, Yasuo, primary, Fujioka, Tomoaki, primary, Obara, Wataru, primary, Mori, Seijiro, primary, Murayama, Shigeo, primary, Nagayama, Satoshi, primary, Miki, Yoshio, primary, Masumoto, Akihide, primary, Yamada, Akira, primary, Nishizawa, Yasuko, primary, Higashiyama, Masahiko, primary, Kutsumi, Hiromu, primary, Koretsune, Yukihiro, primary, Yoshiyama, Takashi, primary, Blok, Marinus J., primary, Boddicker, Nicholas, primary, Brunet, Joan, primary, Burnside, Elizabeth S., primary, Calvello, Mariarosaria, primary, Campbell, Ian, primary, Chan, Sock Hoai, primary, Chen, Fei, primary, Chiang, Jian Bang, primary, Coppa, Anna, primary, Cortesi, Laura, primary, Crujeiras-González, Ana, primary, Borecka, Marianna, primary, Cerna, Marta, primary, Hovhannisyan, Milena, primary, Jelinkova, Sandra, primary, Nehasil, Petr, primary, Foretova, Lenka, primary, Machackova, Eva, primary, Krutilkova, Vera, primary, Tavandzis, Spiros, primary, Cerna, Leona, primary, Chvojka, Stepan, primary, Koudova, Monika, primary, Puchmajerova, Alena, primary, Havranek, Ondrej, primary, Novotny, Jan, primary, Vesela, Kamila, primary, Vocka, Michal, primary, Hruskova, Lucie, primary, Michalovska, Renata, primary, Schwetzova, Denisa, primary, Vlckova, Zdenka, primary, Cerna, Monika, primary, Hejnalova, Marketa, primary, Jedlickova, Nikol, primary, Subrt, Ivan, primary, Zavoral, Tomas, primary, Kosarova, Marcela, primary, Vacinova, Gabriela, primary, Janikova, Maria, primary, Kratochvilova, Romana, primary, Curtisova, Vaclava, primary, Vrtel, Radek, primary, Scheinost, Ondrej, primary, Duskova, Petra, primary, Stranecky, Viktor, primary, De Leeneer, Kim, primary, De Putter, Robin, primary, DePersia, Allison, primary, Devereux, Lisa, primary, Domchek, Susan, primary, Efremidis, Anna, primary, Engel, Christoph, primary, Ernst, Corinna, primary, Evans, D. Gareth R., primary, Feliubadaló, Lidia, primary, Fostira, Florentia, primary, Fuentes-Ríos, Olivia, primary, Gómez-García, Encarna B., primary, González, Sara, primary, Haiman, Christopher, primary, Hansen, Thomas van Overeem, primary, Hauke, Jan, primary, Hodge, James, primary, Hu, Chunling, primary, Huang, Hongyan, primary, Ishak, Nur Diana Binte, primary, Iwasaki, Yusuke, primary, Konstantopoulou, Irene, primary, Kraft, Peter, primary, Lacey, James, primary, Lázaro, Conxi, primary, Li, Na, primary, Lim, Weng Khong, primary, Lindstrom, Sara, primary, Lori, Adriana, primary, Martinez, Elana, primary, Martins, Alexandra, primary, Matullo, Giuseppe, primary, McInerny, Simone, primary, Michailidou, Kyriaki, primary, Montagna, Marco, primary, Monteiro, Alvaro N.A., primary, Mori, Luigi, primary, Nathanson, Katherine, primary, Neuhausen, Susan L., primary, Nevanlinna, Heli, primary, Olson, Janet E., primary, Palmer, Julie, primary, Pasini, Barbara, primary, Patel, Alpa, primary, Piane, Maria, primary, Poppe, Bruce, primary, Radice, Paolo, primary, Renieri, Alessandra, primary, Resta, Nicoletta, primary, Richardson, Marcy E., primary, Rosseel, Toon, primary, Ruddy, Kathryn J., primary, Santamariña, Marta, primary, Dos Santos, Elizabeth Santana, primary, Teras, Lauren, primary, Toland, Amanda E., primary, Trentham-Dietz, Amy, primary, Vachon, Celine M., primary, Volk, Alexander E., primary, Weber-Lassalle, Nana, primary, Weitzel, Jeffrey N., primary, Wiesmuller, Lisa, primary, Winham, Stacey, primary, Yadav, Siddhartha, primary, Yannoukakos, Drakoulis, primary, Yao, Song, primary, Zampiga, Valentina, primary, Zethoven, Magnus, primary, Zhang, Ze Wen, primary, Zima, Tomas, primary, Spurdle, Amanda B., primary, Vega, Ana, primary, Rossing, Maria, primary, Del Valle, Jesús, primary, De Nicolo, Arcangela, primary, Hahnen, Eric, primary, Claes, Kathleen B.M., primary, Ngeow, Joanne, primary, James, Paul A., primary, Couch, Fergus J., primary, Macurek, Libor, primary, and Kleibl, Zdenek, primary
Published: 2023
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7. Figure 3 from ENIGMA CHEK2gether Project: A Comprehensive Study Identifies Functionally Impaired CHEK2 Germline Missense Variants Associated with Increased Breast Cancer Risk

Author: Stolarova, Lenka, primary, Kleiblova, Petra, primary, Zemankova, Petra, primary, Stastna, Barbora, primary, Janatova, Marketa, primary, Soukupova, Jana, primary, Achatz, Maria Isabel, primary, Ambrosone, Christine, primary, Apostolou, Paraskevi, primary, Arun, Banu K., primary, Auer, Paul, primary, Barnard, Mollie, primary, Bertelsen, Birgitte, primary, Matsuda, Koichi, primary, Kamatani, Yoichiro, primary, Morisaki, Takayuki, primary, Nagai, Akiko, primary, Muto, Kaori, primary, Murakami, Yoshinori, primary, Furukawa, Yoichi, primary, Yamanashi, Yuji, primary, Nakamura, Yusuke, primary, Mushiroda, Taisei, primary, Momozawa, Yukihide, primary, Tanaka, Toshihiro, primary, Ohnishi, Yozo, primary, Kubo, Michiaki, primary, Higashiue, Shinichi, primary, Kobayashi, Shuzo, primary, Minami, Shiro, primary, Yamaguhci, Hiroki, primary, Arai, Hajime, primary, Yamaji, Ken, primary, Okazaki, Yasushi, primary, Asai, Satoshi, primary, Takahashi, Yasuo, primary, Fujioka, Tomoaki, primary, Obara, Wataru, primary, Mori, Seijiro, primary, Murayama, Shigeo, primary, Nagayama, Satoshi, primary, Miki, Yoshio, primary, Masumoto, Akihide, primary, Yamada, Akira, primary, Nishizawa, Yasuko, primary, Higashiyama, Masahiko, primary, Kutsumi, Hiromu, primary, Koretsune, Yukihiro, primary, Yoshiyama, Takashi, primary, Blok, Marinus J., primary, Boddicker, Nicholas, primary, Brunet, Joan, primary, Burnside, Elizabeth S., primary, Calvello, Mariarosaria, primary, Campbell, Ian, primary, Chan, Sock Hoai, primary, Chen, Fei, primary, Chiang, Jian Bang, primary, Coppa, Anna, primary, Cortesi, Laura, primary, Crujeiras-González, Ana, primary, Borecka, Marianna, primary, Cerna, Marta, primary, Hovhannisyan, Milena, primary, Jelinkova, Sandra, primary, Nehasil, Petr, primary, Foretova, Lenka, primary, Machackova, Eva, primary, Krutilkova, Vera, primary, Tavandzis, Spiros, primary, Cerna, Leona, primary, Chvojka, Stepan, primary, Koudova, Monika, primary, Puchmajerova, Alena, primary, Havranek, Ondrej, primary, Novotny, Jan, primary, Vesela, Kamila, primary, Vocka, Michal, primary, Hruskova, Lucie, primary, Michalovska, Renata, primary, Schwetzova, Denisa, primary, Vlckova, Zdenka, primary, Cerna, Monika, primary, Hejnalova, Marketa, primary, Jedlickova, Nikol, primary, Subrt, Ivan, primary, Zavoral, Tomas, primary, Kosarova, Marcela, primary, Vacinova, Gabriela, primary, Janikova, Maria, primary, Kratochvilova, Romana, primary, Curtisova, Vaclava, primary, Vrtel, Radek, primary, Scheinost, Ondrej, primary, Duskova, Petra, primary, Stranecky, Viktor, primary, De Leeneer, Kim, primary, De Putter, Robin, primary, DePersia, Allison, primary, Devereux, Lisa, primary, Domchek, Susan, primary, Efremidis, Anna, primary, Engel, Christoph, primary, Ernst, Corinna, primary, Evans, D. Gareth R., primary, Feliubadaló, Lidia, primary, Fostira, Florentia, primary, Fuentes-Ríos, Olivia, primary, Gómez-García, Encarna B., primary, González, Sara, primary, Haiman, Christopher, primary, Hansen, Thomas van Overeem, primary, Hauke, Jan, primary, Hodge, James, primary, Hu, Chunling, primary, Huang, Hongyan, primary, Ishak, Nur Diana Binte, primary, Iwasaki, Yusuke, primary, Konstantopoulou, Irene, primary, Kraft, Peter, primary, Lacey, James, primary, Lázaro, Conxi, primary, Li, Na, primary, Lim, Weng Khong, primary, Lindstrom, Sara, primary, Lori, Adriana, primary, Martinez, Elana, primary, Martins, Alexandra, primary, Matullo, Giuseppe, primary, McInerny, Simone, primary, Michailidou, Kyriaki, primary, Montagna, Marco, primary, Monteiro, Alvaro N.A., primary, Mori, Luigi, primary, Nathanson, Katherine, primary, Neuhausen, Susan L., primary, Nevanlinna, Heli, primary, Olson, Janet E., primary, Palmer, Julie, primary, Pasini, Barbara, primary, Patel, Alpa, primary, Piane, Maria, primary, Poppe, Bruce, primary, Radice, Paolo, primary, Renieri, Alessandra, primary, Resta, Nicoletta, primary, Richardson, Marcy E., primary, Rosseel, Toon, primary, Ruddy, Kathryn J., primary, Santamariña, Marta, primary, Dos Santos, Elizabeth Santana, primary, Teras, Lauren, primary, Toland, Amanda E., primary, Trentham-Dietz, Amy, primary, Vachon, Celine M., primary, Volk, Alexander E., primary, Weber-Lassalle, Nana, primary, Weitzel, Jeffrey N., primary, Wiesmuller, Lisa, primary, Winham, Stacey, primary, Yadav, Siddhartha, primary, Yannoukakos, Drakoulis, primary, Yao, Song, primary, Zampiga, Valentina, primary, Zethoven, Magnus, primary, Zhang, Ze Wen, primary, Zima, Tomas, primary, Spurdle, Amanda B., primary, Vega, Ana, primary, Rossing, Maria, primary, Del Valle, Jesús, primary, De Nicolo, Arcangela, primary, Hahnen, Eric, primary, Claes, Kathleen B.M., primary, Ngeow, Joanne, primary, James, Paul A., primary, Couch, Fergus J., primary, Macurek, Libor, primary, and Kleibl, Zdenek, primary
Published: 2023
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8. Figure 6 from ENIGMA CHEK2gether Project: A Comprehensive Study Identifies Functionally Impaired CHEK2 Germline Missense Variants Associated with Increased Breast Cancer Risk

Author: Stolarova, Lenka, primary, Kleiblova, Petra, primary, Zemankova, Petra, primary, Stastna, Barbora, primary, Janatova, Marketa, primary, Soukupova, Jana, primary, Achatz, Maria Isabel, primary, Ambrosone, Christine, primary, Apostolou, Paraskevi, primary, Arun, Banu K., primary, Auer, Paul, primary, Barnard, Mollie, primary, Bertelsen, Birgitte, primary, Matsuda, Koichi, primary, Kamatani, Yoichiro, primary, Morisaki, Takayuki, primary, Nagai, Akiko, primary, Muto, Kaori, primary, Murakami, Yoshinori, primary, Furukawa, Yoichi, primary, Yamanashi, Yuji, primary, Nakamura, Yusuke, primary, Mushiroda, Taisei, primary, Momozawa, Yukihide, primary, Tanaka, Toshihiro, primary, Ohnishi, Yozo, primary, Kubo, Michiaki, primary, Higashiue, Shinichi, primary, Kobayashi, Shuzo, primary, Minami, Shiro, primary, Yamaguhci, Hiroki, primary, Arai, Hajime, primary, Yamaji, Ken, primary, Okazaki, Yasushi, primary, Asai, Satoshi, primary, Takahashi, Yasuo, primary, Fujioka, Tomoaki, primary, Obara, Wataru, primary, Mori, Seijiro, primary, Murayama, Shigeo, primary, Nagayama, Satoshi, primary, Miki, Yoshio, primary, Masumoto, Akihide, primary, Yamada, Akira, primary, Nishizawa, Yasuko, primary, Higashiyama, Masahiko, primary, Kutsumi, Hiromu, primary, Koretsune, Yukihiro, primary, Yoshiyama, Takashi, primary, Blok, Marinus J., primary, Boddicker, Nicholas, primary, Brunet, Joan, primary, Burnside, Elizabeth S., primary, Calvello, Mariarosaria, primary, Campbell, Ian, primary, Chan, Sock Hoai, primary, Chen, Fei, primary, Chiang, Jian Bang, primary, Coppa, Anna, primary, Cortesi, Laura, primary, Crujeiras-González, Ana, primary, Borecka, Marianna, primary, Cerna, Marta, primary, Hovhannisyan, Milena, primary, Jelinkova, Sandra, primary, Nehasil, Petr, primary, Foretova, Lenka, primary, Machackova, Eva, primary, Krutilkova, Vera, primary, Tavandzis, Spiros, primary, Cerna, Leona, primary, Chvojka, Stepan, primary, Koudova, Monika, primary, Puchmajerova, Alena, primary, Havranek, Ondrej, primary, Novotny, Jan, primary, Vesela, Kamila, primary, Vocka, Michal, primary, Hruskova, Lucie, primary, Michalovska, Renata, primary, Schwetzova, Denisa, primary, Vlckova, Zdenka, primary, Cerna, Monika, primary, Hejnalova, Marketa, primary, Jedlickova, Nikol, primary, Subrt, Ivan, primary, Zavoral, Tomas, primary, Kosarova, Marcela, primary, Vacinova, Gabriela, primary, Janikova, Maria, primary, Kratochvilova, Romana, primary, Curtisova, Vaclava, primary, Vrtel, Radek, primary, Scheinost, Ondrej, primary, Duskova, Petra, primary, Stranecky, Viktor, primary, De Leeneer, Kim, primary, De Putter, Robin, primary, DePersia, Allison, primary, Devereux, Lisa, primary, Domchek, Susan, primary, Efremidis, Anna, primary, Engel, Christoph, primary, Ernst, Corinna, primary, Evans, D. Gareth R., primary, Feliubadaló, Lidia, primary, Fostira, Florentia, primary, Fuentes-Ríos, Olivia, primary, Gómez-García, Encarna B., primary, González, Sara, primary, Haiman, Christopher, primary, Hansen, Thomas van Overeem, primary, Hauke, Jan, primary, Hodge, James, primary, Hu, Chunling, primary, Huang, Hongyan, primary, Ishak, Nur Diana Binte, primary, Iwasaki, Yusuke, primary, Konstantopoulou, Irene, primary, Kraft, Peter, primary, Lacey, James, primary, Lázaro, Conxi, primary, Li, Na, primary, Lim, Weng Khong, primary, Lindstrom, Sara, primary, Lori, Adriana, primary, Martinez, Elana, primary, Martins, Alexandra, primary, Matullo, Giuseppe, primary, McInerny, Simone, primary, Michailidou, Kyriaki, primary, Montagna, Marco, primary, Monteiro, Alvaro N.A., primary, Mori, Luigi, primary, Nathanson, Katherine, primary, Neuhausen, Susan L., primary, Nevanlinna, Heli, primary, Olson, Janet E., primary, Palmer, Julie, primary, Pasini, Barbara, primary, Patel, Alpa, primary, Piane, Maria, primary, Poppe, Bruce, primary, Radice, Paolo, primary, Renieri, Alessandra, primary, Resta, Nicoletta, primary, Richardson, Marcy E., primary, Rosseel, Toon, primary, Ruddy, Kathryn J., primary, Santamariña, Marta, primary, Dos Santos, Elizabeth Santana, primary, Teras, Lauren, primary, Toland, Amanda E., primary, Trentham-Dietz, Amy, primary, Vachon, Celine M., primary, Volk, Alexander E., primary, Weber-Lassalle, Nana, primary, Weitzel, Jeffrey N., primary, Wiesmuller, Lisa, primary, Winham, Stacey, primary, Yadav, Siddhartha, primary, Yannoukakos, Drakoulis, primary, Yao, Song, primary, Zampiga, Valentina, primary, Zethoven, Magnus, primary, Zhang, Ze Wen, primary, Zima, Tomas, primary, Spurdle, Amanda B., primary, Vega, Ana, primary, Rossing, Maria, primary, Del Valle, Jesús, primary, De Nicolo, Arcangela, primary, Hahnen, Eric, primary, Claes, Kathleen B.M., primary, Ngeow, Joanne, primary, James, Paul A., primary, Couch, Fergus J., primary, Macurek, Libor, primary, and Kleibl, Zdenek, primary
Published: 2023
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9. Table S2 from ENIGMA CHEK2gether Project: A Comprehensive Study Identifies Functionally Impaired CHEK2 Germline Missense Variants Associated with Increased Breast Cancer Risk

Author: Stolarova, Lenka, primary, Kleiblova, Petra, primary, Zemankova, Petra, primary, Stastna, Barbora, primary, Janatova, Marketa, primary, Soukupova, Jana, primary, Achatz, Maria Isabel, primary, Ambrosone, Christine, primary, Apostolou, Paraskevi, primary, Arun, Banu K., primary, Auer, Paul, primary, Barnard, Mollie, primary, Bertelsen, Birgitte, primary, Matsuda, Koichi, primary, Kamatani, Yoichiro, primary, Morisaki, Takayuki, primary, Nagai, Akiko, primary, Muto, Kaori, primary, Murakami, Yoshinori, primary, Furukawa, Yoichi, primary, Yamanashi, Yuji, primary, Nakamura, Yusuke, primary, Mushiroda, Taisei, primary, Momozawa, Yukihide, primary, Tanaka, Toshihiro, primary, Ohnishi, Yozo, primary, Kubo, Michiaki, primary, Higashiue, Shinichi, primary, Kobayashi, Shuzo, primary, Minami, Shiro, primary, Yamaguhci, Hiroki, primary, Arai, Hajime, primary, Yamaji, Ken, primary, Okazaki, Yasushi, primary, Asai, Satoshi, primary, Takahashi, Yasuo, primary, Fujioka, Tomoaki, primary, Obara, Wataru, primary, Mori, Seijiro, primary, Murayama, Shigeo, primary, Nagayama, Satoshi, primary, Miki, Yoshio, primary, Masumoto, Akihide, primary, Yamada, Akira, primary, Nishizawa, Yasuko, primary, Higashiyama, Masahiko, primary, Kutsumi, Hiromu, primary, Koretsune, Yukihiro, primary, Yoshiyama, Takashi, primary, Blok, Marinus J., primary, Boddicker, Nicholas, primary, Brunet, Joan, primary, Burnside, Elizabeth S., primary, Calvello, Mariarosaria, primary, Campbell, Ian, primary, Chan, Sock Hoai, primary, Chen, Fei, primary, Chiang, Jian Bang, primary, Coppa, Anna, primary, Cortesi, Laura, primary, Crujeiras-González, Ana, primary, Borecka, Marianna, primary, Cerna, Marta, primary, Hovhannisyan, Milena, primary, Jelinkova, Sandra, primary, Nehasil, Petr, primary, Foretova, Lenka, primary, Machackova, Eva, primary, Krutilkova, Vera, primary, Tavandzis, Spiros, primary, Cerna, Leona, primary, Chvojka, Stepan, primary, Koudova, Monika, primary, Puchmajerova, Alena, primary, Havranek, Ondrej, primary, Novotny, Jan, primary, Vesela, Kamila, primary, Vocka, Michal, primary, Hruskova, Lucie, primary, Michalovska, Renata, primary, Schwetzova, Denisa, primary, Vlckova, Zdenka, primary, Cerna, Monika, primary, Hejnalova, Marketa, primary, Jedlickova, Nikol, primary, Subrt, Ivan, primary, Zavoral, Tomas, primary, Kosarova, Marcela, primary, Vacinova, Gabriela, primary, Janikova, Maria, primary, Kratochvilova, Romana, primary, Curtisova, Vaclava, primary, Vrtel, Radek, primary, Scheinost, Ondrej, primary, Duskova, Petra, primary, Stranecky, Viktor, primary, De Leeneer, Kim, primary, De Putter, Robin, primary, DePersia, Allison, primary, Devereux, Lisa, primary, Domchek, Susan, primary, Efremidis, Anna, primary, Engel, Christoph, primary, Ernst, Corinna, primary, Evans, D. Gareth R., primary, Feliubadaló, Lidia, primary, Fostira, Florentia, primary, Fuentes-Ríos, Olivia, primary, Gómez-García, Encarna B., primary, González, Sara, primary, Haiman, Christopher, primary, Hansen, Thomas van Overeem, primary, Hauke, Jan, primary, Hodge, James, primary, Hu, Chunling, primary, Huang, Hongyan, primary, Ishak, Nur Diana Binte, primary, Iwasaki, Yusuke, primary, Konstantopoulou, Irene, primary, Kraft, Peter, primary, Lacey, James, primary, Lázaro, Conxi, primary, Li, Na, primary, Lim, Weng Khong, primary, Lindstrom, Sara, primary, Lori, Adriana, primary, Martinez, Elana, primary, Martins, Alexandra, primary, Matullo, Giuseppe, primary, McInerny, Simone, primary, Michailidou, Kyriaki, primary, Montagna, Marco, primary, Monteiro, Alvaro N.A., primary, Mori, Luigi, primary, Nathanson, Katherine, primary, Neuhausen, Susan L., primary, Nevanlinna, Heli, primary, Olson, Janet E., primary, Palmer, Julie, primary, Pasini, Barbara, primary, Patel, Alpa, primary, Piane, Maria, primary, Poppe, Bruce, primary, Radice, Paolo, primary, Renieri, Alessandra, primary, Resta, Nicoletta, primary, Richardson, Marcy E., primary, Rosseel, Toon, primary, Ruddy, Kathryn J., primary, Santamariña, Marta, primary, Dos Santos, Elizabeth Santana, primary, Teras, Lauren, primary, Toland, Amanda E., primary, Trentham-Dietz, Amy, primary, Vachon, Celine M., primary, Volk, Alexander E., primary, Weber-Lassalle, Nana, primary, Weitzel, Jeffrey N., primary, Wiesmuller, Lisa, primary, Winham, Stacey, primary, Yadav, Siddhartha, primary, Yannoukakos, Drakoulis, primary, Yao, Song, primary, Zampiga, Valentina, primary, Zethoven, Magnus, primary, Zhang, Ze Wen, primary, Zima, Tomas, primary, Spurdle, Amanda B., primary, Vega, Ana, primary, Rossing, Maria, primary, Del Valle, Jesús, primary, De Nicolo, Arcangela, primary, Hahnen, Eric, primary, Claes, Kathleen B.M., primary, Ngeow, Joanne, primary, James, Paul A., primary, Couch, Fergus J., primary, Macurek, Libor, primary, and Kleibl, Zdenek, primary
Published: 2023
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10. Data from ENIGMA CHEK2gether Project: A Comprehensive Study Identifies Functionally Impaired CHEK2 Germline Missense Variants Associated with Increased Breast Cancer Risk

Author: Stolarova, Lenka, primary, Kleiblova, Petra, primary, Zemankova, Petra, primary, Stastna, Barbora, primary, Janatova, Marketa, primary, Soukupova, Jana, primary, Achatz, Maria Isabel, primary, Ambrosone, Christine, primary, Apostolou, Paraskevi, primary, Arun, Banu K., primary, Auer, Paul, primary, Barnard, Mollie, primary, Bertelsen, Birgitte, primary, Matsuda, Koichi, primary, Kamatani, Yoichiro, primary, Morisaki, Takayuki, primary, Nagai, Akiko, primary, Muto, Kaori, primary, Murakami, Yoshinori, primary, Furukawa, Yoichi, primary, Yamanashi, Yuji, primary, Nakamura, Yusuke, primary, Mushiroda, Taisei, primary, Momozawa, Yukihide, primary, Tanaka, Toshihiro, primary, Ohnishi, Yozo, primary, Kubo, Michiaki, primary, Higashiue, Shinichi, primary, Kobayashi, Shuzo, primary, Minami, Shiro, primary, Yamaguhci, Hiroki, primary, Arai, Hajime, primary, Yamaji, Ken, primary, Okazaki, Yasushi, primary, Asai, Satoshi, primary, Takahashi, Yasuo, primary, Fujioka, Tomoaki, primary, Obara, Wataru, primary, Mori, Seijiro, primary, Murayama, Shigeo, primary, Nagayama, Satoshi, primary, Miki, Yoshio, primary, Masumoto, Akihide, primary, Yamada, Akira, primary, Nishizawa, Yasuko, primary, Higashiyama, Masahiko, primary, Kutsumi, Hiromu, primary, Koretsune, Yukihiro, primary, Yoshiyama, Takashi, primary, Blok, Marinus J., primary, Boddicker, Nicholas, primary, Brunet, Joan, primary, Burnside, Elizabeth S., primary, Calvello, Mariarosaria, primary, Campbell, Ian, primary, Chan, Sock Hoai, primary, Chen, Fei, primary, Chiang, Jian Bang, primary, Coppa, Anna, primary, Cortesi, Laura, primary, Crujeiras-González, Ana, primary, Borecka, Marianna, primary, Cerna, Marta, primary, Hovhannisyan, Milena, primary, Jelinkova, Sandra, primary, Nehasil, Petr, primary, Foretova, Lenka, primary, Machackova, Eva, primary, Krutilkova, Vera, primary, Tavandzis, Spiros, primary, Cerna, Leona, primary, Chvojka, Stepan, primary, Koudova, Monika, primary, Puchmajerova, Alena, primary, Havranek, Ondrej, primary, Novotny, Jan, primary, Vesela, Kamila, primary, Vocka, Michal, primary, Hruskova, Lucie, primary, Michalovska, Renata, primary, Schwetzova, Denisa, primary, Vlckova, Zdenka, primary, Cerna, Monika, primary, Hejnalova, Marketa, primary, Jedlickova, Nikol, primary, Subrt, Ivan, primary, Zavoral, Tomas, primary, Kosarova, Marcela, primary, Vacinova, Gabriela, primary, Janikova, Maria, primary, Kratochvilova, Romana, primary, Curtisova, Vaclava, primary, Vrtel, Radek, primary, Scheinost, Ondrej, primary, Duskova, Petra, primary, Stranecky, Viktor, primary, De Leeneer, Kim, primary, De Putter, Robin, primary, DePersia, Allison, primary, Devereux, Lisa, primary, Domchek, Susan, primary, Efremidis, Anna, primary, Engel, Christoph, primary, Ernst, Corinna, primary, Evans, D. Gareth R., primary, Feliubadaló, Lidia, primary, Fostira, Florentia, primary, Fuentes-Ríos, Olivia, primary, Gómez-García, Encarna B., primary, González, Sara, primary, Haiman, Christopher, primary, Hansen, Thomas van Overeem, primary, Hauke, Jan, primary, Hodge, James, primary, Hu, Chunling, primary, Huang, Hongyan, primary, Ishak, Nur Diana Binte, primary, Iwasaki, Yusuke, primary, Konstantopoulou, Irene, primary, Kraft, Peter, primary, Lacey, James, primary, Lázaro, Conxi, primary, Li, Na, primary, Lim, Weng Khong, primary, Lindstrom, Sara, primary, Lori, Adriana, primary, Martinez, Elana, primary, Martins, Alexandra, primary, Matullo, Giuseppe, primary, McInerny, Simone, primary, Michailidou, Kyriaki, primary, Montagna, Marco, primary, Monteiro, Alvaro N.A., primary, Mori, Luigi, primary, Nathanson, Katherine, primary, Neuhausen, Susan L., primary, Nevanlinna, Heli, primary, Olson, Janet E., primary, Palmer, Julie, primary, Pasini, Barbara, primary, Patel, Alpa, primary, Piane, Maria, primary, Poppe, Bruce, primary, Radice, Paolo, primary, Renieri, Alessandra, primary, Resta, Nicoletta, primary, Richardson, Marcy E., primary, Rosseel, Toon, primary, Ruddy, Kathryn J., primary, Santamariña, Marta, primary, Dos Santos, Elizabeth Santana, primary, Teras, Lauren, primary, Toland, Amanda E., primary, Trentham-Dietz, Amy, primary, Vachon, Celine M., primary, Volk, Alexander E., primary, Weber-Lassalle, Nana, primary, Weitzel, Jeffrey N., primary, Wiesmuller, Lisa, primary, Winham, Stacey, primary, Yadav, Siddhartha, primary, Yannoukakos, Drakoulis, primary, Yao, Song, primary, Zampiga, Valentina, primary, Zethoven, Magnus, primary, Zhang, Ze Wen, primary, Zima, Tomas, primary, Spurdle, Amanda B., primary, Vega, Ana, primary, Rossing, Maria, primary, Del Valle, Jesús, primary, De Nicolo, Arcangela, primary, Hahnen, Eric, primary, Claes, Kathleen B.M., primary, Ngeow, Joanne, primary, James, Paul A., primary, Couch, Fergus J., primary, Macurek, Libor, primary, and Kleibl, Zdenek, primary
Published: 2023
Full Text: View/download PDF

11. Figure 4 from ENIGMA CHEK2gether Project: A Comprehensive Study Identifies Functionally Impaired CHEK2 Germline Missense Variants Associated with Increased Breast Cancer Risk

Author: Stolarova, Lenka, primary, Kleiblova, Petra, primary, Zemankova, Petra, primary, Stastna, Barbora, primary, Janatova, Marketa, primary, Soukupova, Jana, primary, Achatz, Maria Isabel, primary, Ambrosone, Christine, primary, Apostolou, Paraskevi, primary, Arun, Banu K., primary, Auer, Paul, primary, Barnard, Mollie, primary, Bertelsen, Birgitte, primary, Matsuda, Koichi, primary, Kamatani, Yoichiro, primary, Morisaki, Takayuki, primary, Nagai, Akiko, primary, Muto, Kaori, primary, Murakami, Yoshinori, primary, Furukawa, Yoichi, primary, Yamanashi, Yuji, primary, Nakamura, Yusuke, primary, Mushiroda, Taisei, primary, Momozawa, Yukihide, primary, Tanaka, Toshihiro, primary, Ohnishi, Yozo, primary, Kubo, Michiaki, primary, Higashiue, Shinichi, primary, Kobayashi, Shuzo, primary, Minami, Shiro, primary, Yamaguhci, Hiroki, primary, Arai, Hajime, primary, Yamaji, Ken, primary, Okazaki, Yasushi, primary, Asai, Satoshi, primary, Takahashi, Yasuo, primary, Fujioka, Tomoaki, primary, Obara, Wataru, primary, Mori, Seijiro, primary, Murayama, Shigeo, primary, Nagayama, Satoshi, primary, Miki, Yoshio, primary, Masumoto, Akihide, primary, Yamada, Akira, primary, Nishizawa, Yasuko, primary, Higashiyama, Masahiko, primary, Kutsumi, Hiromu, primary, Koretsune, Yukihiro, primary, Yoshiyama, Takashi, primary, Blok, Marinus J., primary, Boddicker, Nicholas, primary, Brunet, Joan, primary, Burnside, Elizabeth S., primary, Calvello, Mariarosaria, primary, Campbell, Ian, primary, Chan, Sock Hoai, primary, Chen, Fei, primary, Chiang, Jian Bang, primary, Coppa, Anna, primary, Cortesi, Laura, primary, Crujeiras-González, Ana, primary, Borecka, Marianna, primary, Cerna, Marta, primary, Hovhannisyan, Milena, primary, Jelinkova, Sandra, primary, Nehasil, Petr, primary, Foretova, Lenka, primary, Machackova, Eva, primary, Krutilkova, Vera, primary, Tavandzis, Spiros, primary, Cerna, Leona, primary, Chvojka, Stepan, primary, Koudova, Monika, primary, Puchmajerova, Alena, primary, Havranek, Ondrej, primary, Novotny, Jan, primary, Vesela, Kamila, primary, Vocka, Michal, primary, Hruskova, Lucie, primary, Michalovska, Renata, primary, Schwetzova, Denisa, primary, Vlckova, Zdenka, primary, Cerna, Monika, primary, Hejnalova, Marketa, primary, Jedlickova, Nikol, primary, Subrt, Ivan, primary, Zavoral, Tomas, primary, Kosarova, Marcela, primary, Vacinova, Gabriela, primary, Janikova, Maria, primary, Kratochvilova, Romana, primary, Curtisova, Vaclava, primary, Vrtel, Radek, primary, Scheinost, Ondrej, primary, Duskova, Petra, primary, Stranecky, Viktor, primary, De Leeneer, Kim, primary, De Putter, Robin, primary, DePersia, Allison, primary, Devereux, Lisa, primary, Domchek, Susan, primary, Efremidis, Anna, primary, Engel, Christoph, primary, Ernst, Corinna, primary, Evans, D. Gareth R., primary, Feliubadaló, Lidia, primary, Fostira, Florentia, primary, Fuentes-Ríos, Olivia, primary, Gómez-García, Encarna B., primary, González, Sara, primary, Haiman, Christopher, primary, Hansen, Thomas van Overeem, primary, Hauke, Jan, primary, Hodge, James, primary, Hu, Chunling, primary, Huang, Hongyan, primary, Ishak, Nur Diana Binte, primary, Iwasaki, Yusuke, primary, Konstantopoulou, Irene, primary, Kraft, Peter, primary, Lacey, James, primary, Lázaro, Conxi, primary, Li, Na, primary, Lim, Weng Khong, primary, Lindstrom, Sara, primary, Lori, Adriana, primary, Martinez, Elana, primary, Martins, Alexandra, primary, Matullo, Giuseppe, primary, McInerny, Simone, primary, Michailidou, Kyriaki, primary, Montagna, Marco, primary, Monteiro, Alvaro N.A., primary, Mori, Luigi, primary, Nathanson, Katherine, primary, Neuhausen, Susan L., primary, Nevanlinna, Heli, primary, Olson, Janet E., primary, Palmer, Julie, primary, Pasini, Barbara, primary, Patel, Alpa, primary, Piane, Maria, primary, Poppe, Bruce, primary, Radice, Paolo, primary, Renieri, Alessandra, primary, Resta, Nicoletta, primary, Richardson, Marcy E., primary, Rosseel, Toon, primary, Ruddy, Kathryn J., primary, Santamariña, Marta, primary, Dos Santos, Elizabeth Santana, primary, Teras, Lauren, primary, Toland, Amanda E., primary, Trentham-Dietz, Amy, primary, Vachon, Celine M., primary, Volk, Alexander E., primary, Weber-Lassalle, Nana, primary, Weitzel, Jeffrey N., primary, Wiesmuller, Lisa, primary, Winham, Stacey, primary, Yadav, Siddhartha, primary, Yannoukakos, Drakoulis, primary, Yao, Song, primary, Zampiga, Valentina, primary, Zethoven, Magnus, primary, Zhang, Ze Wen, primary, Zima, Tomas, primary, Spurdle, Amanda B., primary, Vega, Ana, primary, Rossing, Maria, primary, Del Valle, Jesús, primary, De Nicolo, Arcangela, primary, Hahnen, Eric, primary, Claes, Kathleen B.M., primary, Ngeow, Joanne, primary, James, Paul A., primary, Couch, Fergus J., primary, Macurek, Libor, primary, and Kleibl, Zdenek, primary
Published: 2023
Full Text: View/download PDF

12. Supplementary Methods 1 from ENIGMA CHEK2gether Project: A Comprehensive Study Identifies Functionally Impaired CHEK2 Germline Missense Variants Associated with Increased Breast Cancer Risk

Author: Stolarova, Lenka, primary, Kleiblova, Petra, primary, Zemankova, Petra, primary, Stastna, Barbora, primary, Janatova, Marketa, primary, Soukupova, Jana, primary, Achatz, Maria Isabel, primary, Ambrosone, Christine, primary, Apostolou, Paraskevi, primary, Arun, Banu K., primary, Auer, Paul, primary, Barnard, Mollie, primary, Bertelsen, Birgitte, primary, Matsuda, Koichi, primary, Kamatani, Yoichiro, primary, Morisaki, Takayuki, primary, Nagai, Akiko, primary, Muto, Kaori, primary, Murakami, Yoshinori, primary, Furukawa, Yoichi, primary, Yamanashi, Yuji, primary, Nakamura, Yusuke, primary, Mushiroda, Taisei, primary, Momozawa, Yukihide, primary, Tanaka, Toshihiro, primary, Ohnishi, Yozo, primary, Kubo, Michiaki, primary, Higashiue, Shinichi, primary, Kobayashi, Shuzo, primary, Minami, Shiro, primary, Yamaguhci, Hiroki, primary, Arai, Hajime, primary, Yamaji, Ken, primary, Okazaki, Yasushi, primary, Asai, Satoshi, primary, Takahashi, Yasuo, primary, Fujioka, Tomoaki, primary, Obara, Wataru, primary, Mori, Seijiro, primary, Murayama, Shigeo, primary, Nagayama, Satoshi, primary, Miki, Yoshio, primary, Masumoto, Akihide, primary, Yamada, Akira, primary, Nishizawa, Yasuko, primary, Higashiyama, Masahiko, primary, Kutsumi, Hiromu, primary, Koretsune, Yukihiro, primary, Yoshiyama, Takashi, primary, Blok, Marinus J., primary, Boddicker, Nicholas, primary, Brunet, Joan, primary, Burnside, Elizabeth S., primary, Calvello, Mariarosaria, primary, Campbell, Ian, primary, Chan, Sock Hoai, primary, Chen, Fei, primary, Chiang, Jian Bang, primary, Coppa, Anna, primary, Cortesi, Laura, primary, Crujeiras-González, Ana, primary, Borecka, Marianna, primary, Cerna, Marta, primary, Hovhannisyan, Milena, primary, Jelinkova, Sandra, primary, Nehasil, Petr, primary, Foretova, Lenka, primary, Machackova, Eva, primary, Krutilkova, Vera, primary, Tavandzis, Spiros, primary, Cerna, Leona, primary, Chvojka, Stepan, primary, Koudova, Monika, primary, Puchmajerova, Alena, primary, Havranek, Ondrej, primary, Novotny, Jan, primary, Vesela, Kamila, primary, Vocka, Michal, primary, Hruskova, Lucie, primary, Michalovska, Renata, primary, Schwetzova, Denisa, primary, Vlckova, Zdenka, primary, Cerna, Monika, primary, Hejnalova, Marketa, primary, Jedlickova, Nikol, primary, Subrt, Ivan, primary, Zavoral, Tomas, primary, Kosarova, Marcela, primary, Vacinova, Gabriela, primary, Janikova, Maria, primary, Kratochvilova, Romana, primary, Curtisova, Vaclava, primary, Vrtel, Radek, primary, Scheinost, Ondrej, primary, Duskova, Petra, primary, Stranecky, Viktor, primary, De Leeneer, Kim, primary, De Putter, Robin, primary, DePersia, Allison, primary, Devereux, Lisa, primary, Domchek, Susan, primary, Efremidis, Anna, primary, Engel, Christoph, primary, Ernst, Corinna, primary, Evans, D. Gareth R., primary, Feliubadaló, Lidia, primary, Fostira, Florentia, primary, Fuentes-Ríos, Olivia, primary, Gómez-García, Encarna B., primary, González, Sara, primary, Haiman, Christopher, primary, Hansen, Thomas van Overeem, primary, Hauke, Jan, primary, Hodge, James, primary, Hu, Chunling, primary, Huang, Hongyan, primary, Ishak, Nur Diana Binte, primary, Iwasaki, Yusuke, primary, Konstantopoulou, Irene, primary, Kraft, Peter, primary, Lacey, James, primary, Lázaro, Conxi, primary, Li, Na, primary, Lim, Weng Khong, primary, Lindstrom, Sara, primary, Lori, Adriana, primary, Martinez, Elana, primary, Martins, Alexandra, primary, Matullo, Giuseppe, primary, McInerny, Simone, primary, Michailidou, Kyriaki, primary, Montagna, Marco, primary, Monteiro, Alvaro N.A., primary, Mori, Luigi, primary, Nathanson, Katherine, primary, Neuhausen, Susan L., primary, Nevanlinna, Heli, primary, Olson, Janet E., primary, Palmer, Julie, primary, Pasini, Barbara, primary, Patel, Alpa, primary, Piane, Maria, primary, Poppe, Bruce, primary, Radice, Paolo, primary, Renieri, Alessandra, primary, Resta, Nicoletta, primary, Richardson, Marcy E., primary, Rosseel, Toon, primary, Ruddy, Kathryn J., primary, Santamariña, Marta, primary, Dos Santos, Elizabeth Santana, primary, Teras, Lauren, primary, Toland, Amanda E., primary, Trentham-Dietz, Amy, primary, Vachon, Celine M., primary, Volk, Alexander E., primary, Weber-Lassalle, Nana, primary, Weitzel, Jeffrey N., primary, Wiesmuller, Lisa, primary, Winham, Stacey, primary, Yadav, Siddhartha, primary, Yannoukakos, Drakoulis, primary, Yao, Song, primary, Zampiga, Valentina, primary, Zethoven, Magnus, primary, Zhang, Ze Wen, primary, Zima, Tomas, primary, Spurdle, Amanda B., primary, Vega, Ana, primary, Rossing, Maria, primary, Del Valle, Jesús, primary, De Nicolo, Arcangela, primary, Hahnen, Eric, primary, Claes, Kathleen B.M., primary, Ngeow, Joanne, primary, James, Paul A., primary, Couch, Fergus J., primary, Macurek, Libor, primary, and Kleibl, Zdenek, primary
Published: 2023
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13. Figure 2 from ENIGMA CHEK2gether Project: A Comprehensive Study Identifies Functionally Impaired CHEK2 Germline Missense Variants Associated with Increased Breast Cancer Risk

Author: Stolarova, Lenka, primary, Kleiblova, Petra, primary, Zemankova, Petra, primary, Stastna, Barbora, primary, Janatova, Marketa, primary, Soukupova, Jana, primary, Achatz, Maria Isabel, primary, Ambrosone, Christine, primary, Apostolou, Paraskevi, primary, Arun, Banu K., primary, Auer, Paul, primary, Barnard, Mollie, primary, Bertelsen, Birgitte, primary, Matsuda, Koichi, primary, Kamatani, Yoichiro, primary, Morisaki, Takayuki, primary, Nagai, Akiko, primary, Muto, Kaori, primary, Murakami, Yoshinori, primary, Furukawa, Yoichi, primary, Yamanashi, Yuji, primary, Nakamura, Yusuke, primary, Mushiroda, Taisei, primary, Momozawa, Yukihide, primary, Tanaka, Toshihiro, primary, Ohnishi, Yozo, primary, Kubo, Michiaki, primary, Higashiue, Shinichi, primary, Kobayashi, Shuzo, primary, Minami, Shiro, primary, Yamaguhci, Hiroki, primary, Arai, Hajime, primary, Yamaji, Ken, primary, Okazaki, Yasushi, primary, Asai, Satoshi, primary, Takahashi, Yasuo, primary, Fujioka, Tomoaki, primary, Obara, Wataru, primary, Mori, Seijiro, primary, Murayama, Shigeo, primary, Nagayama, Satoshi, primary, Miki, Yoshio, primary, Masumoto, Akihide, primary, Yamada, Akira, primary, Nishizawa, Yasuko, primary, Higashiyama, Masahiko, primary, Kutsumi, Hiromu, primary, Koretsune, Yukihiro, primary, Yoshiyama, Takashi, primary, Blok, Marinus J., primary, Boddicker, Nicholas, primary, Brunet, Joan, primary, Burnside, Elizabeth S., primary, Calvello, Mariarosaria, primary, Campbell, Ian, primary, Chan, Sock Hoai, primary, Chen, Fei, primary, Chiang, Jian Bang, primary, Coppa, Anna, primary, Cortesi, Laura, primary, Crujeiras-González, Ana, primary, Borecka, Marianna, primary, Cerna, Marta, primary, Hovhannisyan, Milena, primary, Jelinkova, Sandra, primary, Nehasil, Petr, primary, Foretova, Lenka, primary, Machackova, Eva, primary, Krutilkova, Vera, primary, Tavandzis, Spiros, primary, Cerna, Leona, primary, Chvojka, Stepan, primary, Koudova, Monika, primary, Puchmajerova, Alena, primary, Havranek, Ondrej, primary, Novotny, Jan, primary, Vesela, Kamila, primary, Vocka, Michal, primary, Hruskova, Lucie, primary, Michalovska, Renata, primary, Schwetzova, Denisa, primary, Vlckova, Zdenka, primary, Cerna, Monika, primary, Hejnalova, Marketa, primary, Jedlickova, Nikol, primary, Subrt, Ivan, primary, Zavoral, Tomas, primary, Kosarova, Marcela, primary, Vacinova, Gabriela, primary, Janikova, Maria, primary, Kratochvilova, Romana, primary, Curtisova, Vaclava, primary, Vrtel, Radek, primary, Scheinost, Ondrej, primary, Duskova, Petra, primary, Stranecky, Viktor, primary, De Leeneer, Kim, primary, De Putter, Robin, primary, DePersia, Allison, primary, Devereux, Lisa, primary, Domchek, Susan, primary, Efremidis, Anna, primary, Engel, Christoph, primary, Ernst, Corinna, primary, Evans, D. Gareth R., primary, Feliubadaló, Lidia, primary, Fostira, Florentia, primary, Fuentes-Ríos, Olivia, primary, Gómez-García, Encarna B., primary, González, Sara, primary, Haiman, Christopher, primary, Hansen, Thomas van Overeem, primary, Hauke, Jan, primary, Hodge, James, primary, Hu, Chunling, primary, Huang, Hongyan, primary, Ishak, Nur Diana Binte, primary, Iwasaki, Yusuke, primary, Konstantopoulou, Irene, primary, Kraft, Peter, primary, Lacey, James, primary, Lázaro, Conxi, primary, Li, Na, primary, Lim, Weng Khong, primary, Lindstrom, Sara, primary, Lori, Adriana, primary, Martinez, Elana, primary, Martins, Alexandra, primary, Matullo, Giuseppe, primary, McInerny, Simone, primary, Michailidou, Kyriaki, primary, Montagna, Marco, primary, Monteiro, Alvaro N.A., primary, Mori, Luigi, primary, Nathanson, Katherine, primary, Neuhausen, Susan L., primary, Nevanlinna, Heli, primary, Olson, Janet E., primary, Palmer, Julie, primary, Pasini, Barbara, primary, Patel, Alpa, primary, Piane, Maria, primary, Poppe, Bruce, primary, Radice, Paolo, primary, Renieri, Alessandra, primary, Resta, Nicoletta, primary, Richardson, Marcy E., primary, Rosseel, Toon, primary, Ruddy, Kathryn J., primary, Santamariña, Marta, primary, Dos Santos, Elizabeth Santana, primary, Teras, Lauren, primary, Toland, Amanda E., primary, Trentham-Dietz, Amy, primary, Vachon, Celine M., primary, Volk, Alexander E., primary, Weber-Lassalle, Nana, primary, Weitzel, Jeffrey N., primary, Wiesmuller, Lisa, primary, Winham, Stacey, primary, Yadav, Siddhartha, primary, Yannoukakos, Drakoulis, primary, Yao, Song, primary, Zampiga, Valentina, primary, Zethoven, Magnus, primary, Zhang, Ze Wen, primary, Zima, Tomas, primary, Spurdle, Amanda B., primary, Vega, Ana, primary, Rossing, Maria, primary, Del Valle, Jesús, primary, De Nicolo, Arcangela, primary, Hahnen, Eric, primary, Claes, Kathleen B.M., primary, Ngeow, Joanne, primary, James, Paul A., primary, Couch, Fergus J., primary, Macurek, Libor, primary, and Kleibl, Zdenek, primary
Published: 2023
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14. Figure 5 from ENIGMA CHEK2gether Project: A Comprehensive Study Identifies Functionally Impaired CHEK2 Germline Missense Variants Associated with Increased Breast Cancer Risk

Author: Stolarova, Lenka, primary, Kleiblova, Petra, primary, Zemankova, Petra, primary, Stastna, Barbora, primary, Janatova, Marketa, primary, Soukupova, Jana, primary, Achatz, Maria Isabel, primary, Ambrosone, Christine, primary, Apostolou, Paraskevi, primary, Arun, Banu K., primary, Auer, Paul, primary, Barnard, Mollie, primary, Bertelsen, Birgitte, primary, Matsuda, Koichi, primary, Kamatani, Yoichiro, primary, Morisaki, Takayuki, primary, Nagai, Akiko, primary, Muto, Kaori, primary, Murakami, Yoshinori, primary, Furukawa, Yoichi, primary, Yamanashi, Yuji, primary, Nakamura, Yusuke, primary, Mushiroda, Taisei, primary, Momozawa, Yukihide, primary, Tanaka, Toshihiro, primary, Ohnishi, Yozo, primary, Kubo, Michiaki, primary, Higashiue, Shinichi, primary, Kobayashi, Shuzo, primary, Minami, Shiro, primary, Yamaguhci, Hiroki, primary, Arai, Hajime, primary, Yamaji, Ken, primary, Okazaki, Yasushi, primary, Asai, Satoshi, primary, Takahashi, Yasuo, primary, Fujioka, Tomoaki, primary, Obara, Wataru, primary, Mori, Seijiro, primary, Murayama, Shigeo, primary, Nagayama, Satoshi, primary, Miki, Yoshio, primary, Masumoto, Akihide, primary, Yamada, Akira, primary, Nishizawa, Yasuko, primary, Higashiyama, Masahiko, primary, Kutsumi, Hiromu, primary, Koretsune, Yukihiro, primary, Yoshiyama, Takashi, primary, Blok, Marinus J., primary, Boddicker, Nicholas, primary, Brunet, Joan, primary, Burnside, Elizabeth S., primary, Calvello, Mariarosaria, primary, Campbell, Ian, primary, Chan, Sock Hoai, primary, Chen, Fei, primary, Chiang, Jian Bang, primary, Coppa, Anna, primary, Cortesi, Laura, primary, Crujeiras-González, Ana, primary, Borecka, Marianna, primary, Cerna, Marta, primary, Hovhannisyan, Milena, primary, Jelinkova, Sandra, primary, Nehasil, Petr, primary, Foretova, Lenka, primary, Machackova, Eva, primary, Krutilkova, Vera, primary, Tavandzis, Spiros, primary, Cerna, Leona, primary, Chvojka, Stepan, primary, Koudova, Monika, primary, Puchmajerova, Alena, primary, Havranek, Ondrej, primary, Novotny, Jan, primary, Vesela, Kamila, primary, Vocka, Michal, primary, Hruskova, Lucie, primary, Michalovska, Renata, primary, Schwetzova, Denisa, primary, Vlckova, Zdenka, primary, Cerna, Monika, primary, Hejnalova, Marketa, primary, Jedlickova, Nikol, primary, Subrt, Ivan, primary, Zavoral, Tomas, primary, Kosarova, Marcela, primary, Vacinova, Gabriela, primary, Janikova, Maria, primary, Kratochvilova, Romana, primary, Curtisova, Vaclava, primary, Vrtel, Radek, primary, Scheinost, Ondrej, primary, Duskova, Petra, primary, Stranecky, Viktor, primary, De Leeneer, Kim, primary, De Putter, Robin, primary, DePersia, Allison, primary, Devereux, Lisa, primary, Domchek, Susan, primary, Efremidis, Anna, primary, Engel, Christoph, primary, Ernst, Corinna, primary, Evans, D. Gareth R., primary, Feliubadaló, Lidia, primary, Fostira, Florentia, primary, Fuentes-Ríos, Olivia, primary, Gómez-García, Encarna B., primary, González, Sara, primary, Haiman, Christopher, primary, Hansen, Thomas van Overeem, primary, Hauke, Jan, primary, Hodge, James, primary, Hu, Chunling, primary, Huang, Hongyan, primary, Ishak, Nur Diana Binte, primary, Iwasaki, Yusuke, primary, Konstantopoulou, Irene, primary, Kraft, Peter, primary, Lacey, James, primary, Lázaro, Conxi, primary, Li, Na, primary, Lim, Weng Khong, primary, Lindstrom, Sara, primary, Lori, Adriana, primary, Martinez, Elana, primary, Martins, Alexandra, primary, Matullo, Giuseppe, primary, McInerny, Simone, primary, Michailidou, Kyriaki, primary, Montagna, Marco, primary, Monteiro, Alvaro N.A., primary, Mori, Luigi, primary, Nathanson, Katherine, primary, Neuhausen, Susan L., primary, Nevanlinna, Heli, primary, Olson, Janet E., primary, Palmer, Julie, primary, Pasini, Barbara, primary, Patel, Alpa, primary, Piane, Maria, primary, Poppe, Bruce, primary, Radice, Paolo, primary, Renieri, Alessandra, primary, Resta, Nicoletta, primary, Richardson, Marcy E., primary, Rosseel, Toon, primary, Ruddy, Kathryn J., primary, Santamariña, Marta, primary, Dos Santos, Elizabeth Santana, primary, Teras, Lauren, primary, Toland, Amanda E., primary, Trentham-Dietz, Amy, primary, Vachon, Celine M., primary, Volk, Alexander E., primary, Weber-Lassalle, Nana, primary, Weitzel, Jeffrey N., primary, Wiesmuller, Lisa, primary, Winham, Stacey, primary, Yadav, Siddhartha, primary, Yannoukakos, Drakoulis, primary, Yao, Song, primary, Zampiga, Valentina, primary, Zethoven, Magnus, primary, Zhang, Ze Wen, primary, Zima, Tomas, primary, Spurdle, Amanda B., primary, Vega, Ana, primary, Rossing, Maria, primary, Del Valle, Jesús, primary, De Nicolo, Arcangela, primary, Hahnen, Eric, primary, Claes, Kathleen B.M., primary, Ngeow, Joanne, primary, James, Paul A., primary, Couch, Fergus J., primary, Macurek, Libor, primary, and Kleibl, Zdenek, primary
Published: 2023
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15. A Novel FLCN Variant in a Suspected Birt–Hogg–Dubè Syndrome Patient

Author: Bandini, Erika, primary, Zampiga, Valentina, additional, Cangini, Ilaria, additional, Ravegnani, Mila, additional, Arcangeli, Valentina, additional, Rossi, Tania, additional, Mammi, Isabella, additional, Schiavi, Francesca, additional, Zovato, Stefania, additional, Falcini, Fabio, additional, Calistri, Daniele, additional, and Danesi, Rita, additional
Published: 2023
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16. Ovarian cancer pathology characteristics as predictors of variant pathogenicity in BRCA1 and BRCA2.

Author: O'Mahony, Denise G, O'Mahony, Denise G, Ramus, Susan J, Southey, Melissa C, Meagher, Nicola S, Hadjisavvas, Andreas, John, Esther M, Hamann, Ute, Imyanitov, Evgeny N, Andrulis, Irene L, Sharma, Priyanka, Daly, Mary B, Hake, Christopher R, Weitzel, Jeffrey N, Jakubowska, Anna, Godwin, Andrew K, Arason, Adalgeir, Bane, Anita, Simard, Jacques, Soucy, Penny, Caligo, Maria A, Mai, Phuong L, Claes, Kathleen BM, Teixeira, Manuel R, Chung, Wendy K, Lazaro, Conxi, Hulick, Peter J, Toland, Amanda E, Pedersen, Inge Sokilde, HEBON Investigators, Neuhausen, Susan L, Vega, Ana, de la Hoya, Miguel, Nevanlinna, Heli, Dhawan, Mallika, Zampiga, Valentina, Danesi, Rita, Varesco, Liliana, Gismondi, Viviana, Vellone, Valerio Gaetano, James, Paul A, Janavicius, Ramunas, Nikitina-Zake, Liene, Nielsen, Finn Cilius, van Overeem Hansen, Thomas, Pejovic, Tanja, Borg, Ake, Rantala, Johanna, Offit, Kenneth, Montagna, Marco, Nathanson, Katherine L, Domchek, Susan M, Osorio, Ana, García, María J, Karlan, Beth Y, GEMO Study Collaborators, De Fazio, Anna, Bowtell, David, AOCS Group, McGuffog, Lesley, Leslie, Goska, Parsons, Michael T, Dörk, Thilo, Speith, Lisa-Marie, Dos Santos, Elizabeth Santana, da Costa, Alexandre André BA, Radice, Paolo, Peterlongo, Paolo, Papi, Laura, Engel, Christoph, Hahnen, Eric, Schmutzler, Rita K, Wappenschmidt, Barbara, Easton, Douglas F, Tischkowitz, Marc, Singer, Christian F, Tan, Yen Yen, Whittemore, Alice S, Sieh, Weiva, Brenton, James D, Yannoukakos, Drakoulis, Fostira, Florentia, Konstantopoulou, Irene, Soukupova, Jana, Vocka, Michal, CZECANCA Consortium, Chenevix-Trench, Georgia, Pharoah, Paul DP, Antoniou, Antonis C, Goldgar, David E, Spurdle, Amanda B, Michailidou, Kyriaki, Consortium of Investigators of Modifiers of BRCA1/2, Evidence-based Network for the Interpretation of Germline Mutant Alleles Consortium, O'Mahony, Denise G, O'Mahony, Denise G, Ramus, Susan J, Southey, Melissa C, Meagher, Nicola S, Hadjisavvas, Andreas, John, Esther M, Hamann, Ute, Imyanitov, Evgeny N, Andrulis, Irene L, Sharma, Priyanka, Daly, Mary B, Hake, Christopher R, Weitzel, Jeffrey N, Jakubowska, Anna, Godwin, Andrew K, Arason, Adalgeir, Bane, Anita, Simard, Jacques, Soucy, Penny, Caligo, Maria A, Mai, Phuong L, Claes, Kathleen BM, Teixeira, Manuel R, Chung, Wendy K, Lazaro, Conxi, Hulick, Peter J, Toland, Amanda E, Pedersen, Inge Sokilde, HEBON Investigators, Neuhausen, Susan L, Vega, Ana, de la Hoya, Miguel, Nevanlinna, Heli, Dhawan, Mallika, Zampiga, Valentina, Danesi, Rita, Varesco, Liliana, Gismondi, Viviana, Vellone, Valerio Gaetano, James, Paul A, Janavicius, Ramunas, Nikitina-Zake, Liene, Nielsen, Finn Cilius, van Overeem Hansen, Thomas, Pejovic, Tanja, Borg, Ake, Rantala, Johanna, Offit, Kenneth, Montagna, Marco, Nathanson, Katherine L, Domchek, Susan M, Osorio, Ana, García, María J, Karlan, Beth Y, GEMO Study Collaborators, De Fazio, Anna, Bowtell, David, AOCS Group, McGuffog, Lesley, Leslie, Goska, Parsons, Michael T, Dörk, Thilo, Speith, Lisa-Marie, Dos Santos, Elizabeth Santana, da Costa, Alexandre André BA, Radice, Paolo, Peterlongo, Paolo, Papi, Laura, Engel, Christoph, Hahnen, Eric, Schmutzler, Rita K, Wappenschmidt, Barbara, Easton, Douglas F, Tischkowitz, Marc, Singer, Christian F, Tan, Yen Yen, Whittemore, Alice S, Sieh, Weiva, Brenton, James D, Yannoukakos, Drakoulis, Fostira, Florentia, Konstantopoulou, Irene, Soukupova, Jana, Vocka, Michal, CZECANCA Consortium, Chenevix-Trench, Georgia, Pharoah, Paul DP, Antoniou, Antonis C, Goldgar, David E, Spurdle, Amanda B, Michailidou, Kyriaki, Consortium of Investigators of Modifiers of BRCA1/2, and Evidence-based Network for the Interpretation of Germline Mutant Alleles Consortium
Abstract: BackgroundThe distribution of ovarian tumour characteristics differs between germline BRCA1 and BRCA2 pathogenic variant carriers and non-carriers. In this study, we assessed the utility of ovarian tumour characteristics as predictors of BRCA1 and BRCA2 variant pathogenicity, for application using the American College of Medical Genetics and the Association for Molecular Pathology (ACMG/AMP) variant classification system.MethodsData for 10,373 ovarian cancer cases, including carriers and non-carriers of BRCA1 or BRCA2 pathogenic variants, were collected from unpublished international cohorts and consortia and published studies. Likelihood ratios (LR) were calculated for the association of ovarian cancer histology and other characteristics, with BRCA1 and BRCA2 variant pathogenicity. Estimates were aligned to ACMG/AMP code strengths (supporting, moderate, strong).ResultsNo histological subtype provided informative ACMG/AMP evidence in favour of BRCA1 and BRCA2 variant pathogenicity. Evidence against variant pathogenicity was estimated for the mucinous and clear cell histologies (supporting) and borderline cases (moderate). Refined associations are provided according to tumour grade, invasion and age at diagnosis.ConclusionsWe provide detailed estimates for predicting BRCA1 and BRCA2 variant pathogenicity based on ovarian tumour characteristics. This evidence can be combined with other variant information under the ACMG/AMP classification system, to improve classification and carrier clinical management.
Published: 2023

17. ENIGMA CHEK2gether Project:A Comprehensive Study Identifies Functionally Impaired CHEK2 Germline Missense Variants Associated with Increased Breast Cancer Risk

Author: Stolarova, Lenka, Kleiblova, Petra, Zemankova, Petra, Stastna, Barbora, Janatova, Marketa, Soukupova, Jana, Achatz, Maria Isabel, Ambrosone, Christine, Apostolou, Paraskevi, Arun, Banu K., Auer, Paul, Barnard, Mollie, Bertelsen, Birgitte, Japan, Biobank, Blok, Marinus J., Boddicker, Nicholas, Brunet, Joan, Burnside, Elizabeth S., Calvello, Mariarosaria, Campbell, Ian, Chan, Sock Hoai, Chen, Fei, Chiang, Jian Bang, Coppa, Anna, Cortesi, Laura, Crujeiras-González, Ana, Czecanca, Consortium, De Leeneer, Kim, De Putter, Robin, DePersia, Allison, Devereux, Lisa, Domchek, Susan, Efremidis, Anna, Engel, Christoph, Ernst, Corinna, Evans, Gareth D.R., Feliubadaló, Lidia, Fostira, Florentia, Fuentes-Ríos, Olivia, Gómez-García, Encarna B., González, Sara, Haiman, Christopher, van Overeem Hansen, Thomas, Hauke, Jan, Hodge, James, Hu, Chunling, Huang, Hongyan, Binte Ishak, Nur Diana, Iwasaki, Yusuke, Konstantopoulou, Irene, Kraft, Peter, Lacey, James, Lázaro, Conxi, Li, Na, Lim, Weng Khong, Lindstrom, Sara, Lori, Adriana, Martinez, Elana, Martins, Alexandra, Matsuda, Koichi, Matullo, Giuseppe, McInerny, Simone, Michailidou, Kyriaki, Montagna, Marco, Monteiro, Alvaro N.A., Mori, Luigi, Nathanson, Katherine, Neuhausen, Susan L., Nevanlinna, Heli, Olson, Janet E., Palmer, Julie, Pasini, Barbara, Patel, Alpa, Piane, Maria, Poppe, Bruce, Radice, Paolo, Renieri, Alessandra, Resta, Nicoletta, Richardson, Marcy E., Rosseel, Toon, Ruddy, Kathryn J., Santamariña, Marta, Dos Santos, Elizabeth Santana, Teras, Lauren, Toland, Amanda E., Trentham-Dietz, Amy, Vachon, Celine M., Volk, Alexander E., Weber-Lassalle, Nana, Weitzel, Jeffrey N., Wiesmuller, Lisa, Winham, Stacey, Yadav, Siddhartha, Yannoukakos, Drakoulis, Yao, Song, Zampiga, Valentina, Zethoven, Magnus, Zhang, Ze Wen, Zima, Tomas, Spurdle, Amanda B., Vega, Ana, Rossing, Maria, Valle, Jesús Del, De Nicolo, Arcangela, Hahnen, Eric, Claes, Kathleen B.M., Ngeow, Joanne, Momozawa, Yukihide, James, Paul A., Couch, Fergus J., Macurek, Libor, Kleibl, Zdenek, Stolarova, Lenka, Kleiblova, Petra, Zemankova, Petra, Stastna, Barbora, Janatova, Marketa, Soukupova, Jana, Achatz, Maria Isabel, Ambrosone, Christine, Apostolou, Paraskevi, Arun, Banu K., Auer, Paul, Barnard, Mollie, Bertelsen, Birgitte, Japan, Biobank, Blok, Marinus J., Boddicker, Nicholas, Brunet, Joan, Burnside, Elizabeth S., Calvello, Mariarosaria, Campbell, Ian, Chan, Sock Hoai, Chen, Fei, Chiang, Jian Bang, Coppa, Anna, Cortesi, Laura, Crujeiras-González, Ana, Czecanca, Consortium, De Leeneer, Kim, De Putter, Robin, DePersia, Allison, Devereux, Lisa, Domchek, Susan, Efremidis, Anna, Engel, Christoph, Ernst, Corinna, Evans, Gareth D.R., Feliubadaló, Lidia, Fostira, Florentia, Fuentes-Ríos, Olivia, Gómez-García, Encarna B., González, Sara, Haiman, Christopher, van Overeem Hansen, Thomas, Hauke, Jan, Hodge, James, Hu, Chunling, Huang, Hongyan, Binte Ishak, Nur Diana, Iwasaki, Yusuke, Konstantopoulou, Irene, Kraft, Peter, Lacey, James, Lázaro, Conxi, Li, Na, Lim, Weng Khong, Lindstrom, Sara, Lori, Adriana, Martinez, Elana, Martins, Alexandra, Matsuda, Koichi, Matullo, Giuseppe, McInerny, Simone, Michailidou, Kyriaki, Montagna, Marco, Monteiro, Alvaro N.A., Mori, Luigi, Nathanson, Katherine, Neuhausen, Susan L., Nevanlinna, Heli, Olson, Janet E., Palmer, Julie, Pasini, Barbara, Patel, Alpa, Piane, Maria, Poppe, Bruce, Radice, Paolo, Renieri, Alessandra, Resta, Nicoletta, Richardson, Marcy E., Rosseel, Toon, Ruddy, Kathryn J., Santamariña, Marta, Dos Santos, Elizabeth Santana, Teras, Lauren, Toland, Amanda E., Trentham-Dietz, Amy, Vachon, Celine M., Volk, Alexander E., Weber-Lassalle, Nana, Weitzel, Jeffrey N., Wiesmuller, Lisa, Winham, Stacey, Yadav, Siddhartha, Yannoukakos, Drakoulis, Yao, Song, Zampiga, Valentina, Zethoven, Magnus, Zhang, Ze Wen, Zima, Tomas, Spurdle, Amanda B., Vega, Ana, Rossing, Maria, Valle, Jesús Del, De Nicolo, Arcangela, Hahnen, Eric, Claes, Kathleen B.M., Ngeow, Joanne, Momozawa, Yukihide, James, Paul A., Couch, Fergus J., Macurek, Libor, and Kleibl, Zdenek
Abstract: Purpose: Germline pathogenic variants in CHEK2 confer moderately elevated breast cancer risk (odds ratio, OR ∼ 2.5), qualifying carriers for enhanced breast cancer screening. Besides pathogenic variants, dozens of missense CHEK2 variants of uncertain significance (VUS) have been identified, hampering the clinical utility of germline genetic testing (GGT). Experimental Design: We collected 460 CHEK2 missense VUS identified by the ENIGMA consortium in 15 countries. Their functional characterization was performed using CHEK2-complementation assays quantifying KAP1 phosphorylation and CHK2 autophosphorylation in human RPE1–CHEK2-knockout cells. Concordant results in both functional assays were used to categorize CHEK2 VUS from 12 ENIGMA case–control datasets, including 73,048 female patients with breast cancer and 88,658 ethnicity-matched controls. Results: A total of 430/460 VUS were successfully analyzed, of which 340 (79.1%) were concordant in both functional assays and categorized as functionally impaired (N = 102), functionally intermediate (N = 12), or functionally wild-type (WT)–like (N = 226). We then examined their association with breast cancer risk in the case–control analysis. The OR and 95% CI (confidence intervals) for carriers of functionally impaired, intermediate, and WT-like variants were 2.83 (95% CI, 2.35–3.41), 1.57 (95% CI, 1.41–1.75), and 1.19 (95% CI, 1.08–1.31), respectively. The meta-analysis of population-specific datasets showed similar results. Conclusions: We determined the functional consequences for the majority of CHEK2 missense VUS found in patients with breast cancer (3,660/4,436; 82.5%). Carriers of functionally impaired missense variants accounted for 0.5% of patients with breast cancer and were associated with a moderate risk similar to that of truncating CHEK2 variants. In contrast, 2.2% of all patients with breast cancer carried functionally wild-type/intermediate missense variants with n, Purpose: Germline pathogenic variants in CHEK2 confer moderately elevated breast cancer risk (odds ratio, OR ~ 2.5), qualifying carriers for enhanced breast cancer screening. Besides pathogenic variants, dozens of missense CHEK2 variants of uncertain significance (VUS) have been identified, hampering the clinical utility of germline genetic testing (GGT). Experimental Design: We collected 460 CHEK2 missense VUS identified by the ENIGMA consortium in 15 countries. Their functional characterization was performed using CHEK2-complementation assays quantifying KAP1 phosphorylation and CHK2 autophosphorylation in human RPE1–CHEK2-knockout cells. Concordant results in both functional assays were used to categorize CHEK2 VUS from 12 ENIGMA case–control datasets, including 73,048 female patients with breast cancer and 88,658 ethnicity-matched controls. Results: A total of 430/460 VUS were successfully analyzed, of which 340 (79.1%) were concordant in both functional assays and categorized as functionally impaired (N ¼ 102), functionally intermediate (N ¼ 12), or functionally wild-type (WT)–like (N ¼ 226). We then examined their association with breast cancer risk in the case–control analysis. The OR and 95% CI (confidence intervals) for carriers of functionally impaired, intermediate, and WT-like variants were 2.83 (95% CI, 2.35–3.41), 1.57 (95% CI, 1.41–1.75), and 1.19 (95% CI, 1.08–1.31), respectively. The meta-analysis of population-specific datasets showed similar results. Conclusions: We determined the functional consequences for the majority of CHEK2 missense VUS found in patients with breast cancer (3,660/4,436; 82.5%). Carriers of functionally impaired missense variants accounted for 0.5% of patients with breast cancer and were associated with a moderate risk similar to that of truncating CHEK2 variants. In contrast, 2.2% of all patients with breast cancer carried functionally wild-type/intermediate missense variants with no clinically relevant breast cancer risk
Published: 2023

18. Prevalence of a BRCA2 Pathogenic Variant in Hereditary-Breast-and-Ovarian-Cancer-Syndrome Families with Increased Risk of Pancreatic Cancer in a Restricted Italian Area

Author: Zampiga, Valentina, primary, Cangini, Ilaria, additional, Bandini, Erika, additional, Azzali, Irene, additional, Ravegnani, Mila, additional, Ravaioli, Alessandra, additional, Mancini, Silvia, additional, Tebaldi, Michela, additional, Tedaldi, Gianluca, additional, Pirini, Francesca, additional, Veneroni, Luigi, additional, Frassineti, Giovanni Luca, additional, Falcini, Fabio, additional, Danesi, Rita, additional, Calistri, Daniele, additional, and Arcangeli, Valentina, additional
Published: 2023
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19. Ovarian cancer pathology characteristics as predictors of variant pathogenicity in BRCA1 and BRCA2

Author: O’Mahony, Denise G., Ramus, Susan J., Southey, Melissa C., Meagher, Nicola S., Hadjisavvas, Andreas, John, Esther M., Hamann, Ute, Imyanitov, Evgeny N., Andrulis, Irene L., Sharma, Priyanka, Daly, Mary B., Hake, Christopher R., Weitzel, Jeffrey N., Jakubowska, Anna, Godwin, Andrew K., Arason, Adalgeir, Bane, Anita, Simard, Jacques, Soucy, Penny, Caligo, Maria A., Mai, Phuong L., Claes, Kathleen B.M., Teixeira, Manuel R., Chung, Wendy K., Lazaro, Conxi, Hulick, Peter J., Toland, Amanda E., Pedersen, Inge Sokilde, Mourits, Marian J.E., Neuhausen, Susan L., Vega, Ana, de la Hoya, Miguel, Nevanlinna, Heli, Dhawan, Mallika, Zampiga, Valentina, Danesi, Rita, Varesco, Liliana, Gismondi, Viviana, Vellone, Valerio Gaetano, James, Paul A., Janavicius, Ramunas, Nikitina-Zake, Liene, Nielsen, Finn Cilius, van Overeem Hansen, Thomas, Pejovic, Tanja, Borg, Ake, Rantala, Johanna, Offit, Kenneth, Montagna, Marco, Nathanson, Katherine L., Domchek, Susan M., Osorio, Ana, García, María J., Karlan, Beth Y., Lesueur, Fabienne, De Fazio, Anna, Bowtell, David, McGuffog, Lesley, Leslie, Goska, Parsons, Michael T., Dörk, Thilo, Speith, Lisa Marie, dos Santos, Elizabeth Santana, da Costa, Alexandre André B.A., Radice, Paolo, Peterlongo, Paolo, Papi, Laura, Engel, Christoph, Hahnen, Eric, Schmutzler, Rita K., Wappenschmidt, Barbara, Easton, Douglas F., Tischkowitz, Marc, Singer, Christian F., Tan, Yen Yen, Whittemore, Alice S., Sieh, Weiva, Brenton, James D., Yannoukakos, Drakoulis, Fostira, Florentia, Konstantopoulou, Irene, Soukupova, Jana, Vocka, Michal, Chenevix-Trench, Georgia, Pharoah, Paul D.P., Antoniou, Antonis C., Goldgar, David E., Spurdle, Amanda B., Michailidou, Kyriaki, O'Mahony, Denise G [0000-0002-7212-0920], Ramus, Susan J [0000-0003-0005-7798], Meagher, Nicola S [0000-0001-9134-2118], Andrulis, Irene L [0000-0002-4226-6435], Weitzel, Jeffrey N [0000-0001-6714-092X], Jakubowska, Anna [0000-0002-5650-0501], Godwin, Andrew K [0000-0002-3987-9580], Arason, Adalgeir [0000-0003-0480-886X], Simard, Jacques [0000-0001-6906-3390], Teixeira, Manuel R [0000-0002-4896-5982], Chung, Wendy K [0000-0003-3438-5685], Hulick, Peter J [0000-0001-8397-4078], Toland, Amanda E [0000-0002-0271-1792], Pedersen, Inge Sokilde [0000-0002-9902-8040], Neuhausen, Susan L [0000-0001-5053-0390], Vega, Ana [0000-0002-7416-5137], de la Hoya, Miguel [0000-0002-8113-1410], Nevanlinna, Heli [0000-0002-0916-2976], Nathanson, Katherine L [0000-0002-6740-0901], Osorio, Ana [0000-0001-8124-3984], García, María J [0000-0002-2236-9912], Karlan, Beth Y [0000-0002-9451-2933], De Fazio, Anna [0000-0003-0057-4744], Leslie, Goska [0000-0001-5756-6222], Dörk, Thilo [0000-0002-9458-0282], Peterlongo, Paolo [0000-0001-6951-6855], Easton, Douglas F [0000-0003-2444-3247], Singer, Christian F [0000-0003-1294-0027], Sieh, Weiva [0000-0003-0085-1190], Brenton, James D [0000-0002-5738-6683], Konstantopoulou, Irene [0000-0002-0470-0309], Soukupova, Jana [0000-0003-2413-1542], Vocka, Michal [0000-0002-9386-657X], Pharoah, Paul DP [0000-0001-8494-732X], Spurdle, Amanda B [0000-0003-1337-7897], Michailidou, Kyriaki [0000-0001-7065-1237], and Apollo - University of Cambridge Repository
Subjects: BRCA2 Protein, Ovarian Neoplasms, Virulence, BRCA1 Protein, Humans, Female, Genetic Predisposition to Disease, Breast Neoplasms
Abstract: Background: The distribution of ovarian tumour characteristics differs between germline BRCA1 and BRCA2 pathogenic variant carriers and non-carriers. In this study, we assessed the utility of ovarian tumour characteristics as predictors of BRCA1 and BRCA2 variant pathogenicity, for application using the American College of Medical Genetics and the Association for Molecular Pathology (ACMG/AMP) variant classification system.Methods: Data for 10,373 ovarian cancer cases, including carriers and non-carriers of BRCA1 or BRCA2 pathogenic variants, were collected from unpublished international cohorts and consortia and published studies. Likelihood ratios (LR) were calculated for the association of ovarian cancer histology and other characteristics, with BRCA1 and BRCA2 variant pathogenicity. Estimates were aligned to ACMG/AMP code strengths (supporting, moderate, strong).Results: No histological subtype provided informative ACMG/AMP evidence in favour of BRCA1 and BRCA2 variant pathogenicity. Evidence against variant pathogenicity was estimated for the mucinous and clear cell histologies (supporting) and borderline cases (moderate). Refined associations are provided according to tumour grade, invasion and age at diagnosis.Conclusions: We provide detailed estimates for predicting BRCA1 and BRCA2 variant pathogenicity based on ovarian tumour characteristics. This evidence can be combined with other variant information under the ACMG/AMP classification system, to improve classification and carrier clinical management. Background: The distribution of ovarian tumour characteristics differs between germline BRCA1 and BRCA2 pathogenic variant carriers and non-carriers. In this study, we assessed the utility of ovarian tumour characteristics as predictors of BRCA1 and BRCA2 variant pathogenicity, for application using the American College of Medical Genetics and the Association for Molecular Pathology (ACMG/AMP) variant classification system.Methods: Data for 10,373 ovarian cancer cases, including carriers and non-carriers of BRCA1 or BRCA2 pathogenic variants, were collected from unpublished international cohorts and consortia and published studies. Likelihood ratios (LR) were calculated for the association of ovarian cancer histology and other characteristics, with BRCA1 and BRCA2 variant pathogenicity. Estimates were aligned to ACMG/AMP code strengths (supporting, moderate, strong).Results: No histological subtype provided informative ACMG/AMP evidence in favour of BRCA1 and BRCA2 variant pathogenicity. Evidence against variant pathogenicity was estimated for the mucinous and clear cell histologies (supporting) and borderline cases (moderate). Refined associations are provided according to tumour grade, invasion and age at diagnosis.Conclusions: We provide detailed estimates for predicting BRCA1 and BRCA2 variant pathogenicity based on ovarian tumour characteristics. This evidence can be combined with other variant information under the ACMG/AMP classification system, to improve classification and carrier clinical management.
Published: 2023
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20. Clinical Impact of Next-Generation Sequencing Multi-Gene Panel Highlighting the Landscape of Germline Alterations in Ovarian Cancer Patients

Author: Gurioli, Giorgia, primary, Tedaldi, Gianluca, additional, Farolfi, Alberto, additional, Petracci, Elisabetta, additional, Casanova, Claudia, additional, Comerci, Giuseppe, additional, Danesi, Rita, additional, Arcangeli, Valentina, additional, Ravegnani, Mila, additional, Calistri, Daniele, additional, Zampiga, Valentina, additional, Cangini, Ilaria, additional, Fonzi, Eugenio, additional, Virga, Alessandra, additional, Tassinari, Davide, additional, Rosati, Marta, additional, Ulivi, Paola, additional, and De Giorgi, Ugo, additional
Published: 2022
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21. Review of: "Impact of deleterious variants in other genes beyond BRCA1/2 in breast/ovarian and pancreatic cancer patients by NGS-based multi-gene panel testing"

Author: ZAMPIGA, VALENTINA, primary
Published: 2022
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22. Case Report: A BRCA2 Mutation Identified Through Next-Generation Sequencing in a Birt–Hogg–Dubè Syndrome Family

Author: Bandini, Erika, primary, Cangini, Ilaria, additional, Arcangeli, Valentina, additional, Ravegnani, Mila, additional, Andreotti, Virginia, additional, Prisinzano, Giovanna, additional, Pastorino, Lorenza, additional, Martinelli, Giovanni, additional, Falcini, Fabio, additional, Calistri, Daniele, additional, Zampiga, Valentina, additional, and Danesi, Rita, additional
Published: 2022
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23. Results of a population-based screening for hereditary breast cancer in a region of North-Central Italy: contribution of BRCA1/2 germ-line mutations

Author: Seymour, Ian J., Casadei, Silvia, Zampiga, Valentina, Rosato, Simonetta, Danesi, Rita, Scarpi, Emanuela, Falcini, Fabio, Strada, Miria, Morini, Nori, Naldoni, Carlo, Amadori, Dino, and Calistri, Daniele
Published: 2008
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24. Characterization of Molecular Alterations of BRCA1/2: Analysis and Interpretation Guidelines

Author: Calistri, Daniele, Zampiga, Valentina, and Zoli, Wainer
Published: 2012

25. Olaparib as salvage treatment for advanced germ cell tumors after chemotherapy failure: Results of the open-label, single-arm, IGG-02 phase II trial.

Author: De Giorgi, Ugo, primary, Schepisi, Giuseppe, additional, Gurioli, Giorgia, additional, Pisano, Carmela, additional, Basso, Umberto, additional, Lolli, Cristian, additional, Petracci, Elisabetta, additional, Casadei, Chiara, additional, Cecere, Sabrina Chiara, additional, Attademo, Laura, additional, Clemente, Alberto, additional, Zampiga, Valentina, additional, Galla, Valentina, additional, Cangini, Ilaria, additional, Di Napoli, Marilena, additional, Valmorri, Linda, additional, and Pignata, Sandro, additional
Published: 2020
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26. Male Breast Cancer: Results of the Application of Multigene Panel Testing to an Italian Cohort of Patients

Author: Tedaldi, Gianluca, primary, Tebaldi, Michela, additional, Zampiga, Valentina, additional, Cangini, Ilaria, additional, Pirini, Francesca, additional, Ferracci, Elisa, additional, Danesi, Rita, additional, Arcangeli, Valentina, additional, Ravegnani, Mila, additional, Martinelli, Giovanni, additional, Falcini, Fabio, additional, Ulivi, Paola, additional, and Calistri, Daniele, additional
Published: 2020
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27. Multigene Panel Testing Increases the Number of Loci Associated with Gastric Cancer Predisposition

Author: Tedaldi, Gianluca, primary, Pirini, Francesca, additional, Tebaldi, Michela, additional, Zampiga, Valentina, additional, Cangini, Ilaria, additional, Danesi, Rita, additional, Arcangeli, Valentina, additional, Ravegnani, Mila, additional, Abou Khouzam, Raefa, additional, Molinari, Chiara, additional, Oliveira, Carla, additional, Morgagni, Paolo, additional, Saragoni, Luca, additional, Bencivenga, Maria, additional, Ulivi, Paola, additional, Amadori, Dino, additional, Martinelli, Giovanni, additional, Falcini, Fabio, additional, Ranzani, Guglielmina Nadia, additional, and Calistri, Daniele, additional
Published: 2019
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28. Large scale multifactorial likelihood quantitative analysis of BRCA1 and BRCA2 variants: An ENIGMA resource to support clinical variant classification

Author: Parsons, Michael T., primary, Tudini, Emma, additional, Li, Hongyan, additional, Hahnen, Eric, additional, Wappenschmidt, Barbara, additional, Feliubadaló, Lidia, additional, Aalfs, Cora M., additional, Agata, Simona, additional, Aittomäki, Kristiina, additional, Alducci, Elisa, additional, Alonso‐Cerezo, María Concepción, additional, Arnold, Norbert, additional, Auber, Bernd, additional, Austin, Rachel, additional, Azzollini, Jacopo, additional, Balmaña, Judith, additional, Barbieri, Elena, additional, Bartram, Claus R., additional, Blanco, Ana, additional, Blümcke, Britta, additional, Bonache, Sandra, additional, Bonanni, Bernardo, additional, Borg, Åke, additional, Bortesi, Beatrice, additional, Brunet, Joan, additional, Bruzzone, Carla, additional, Bucksch, Karolin, additional, Cagnoli, Giulia, additional, Caldés, Trinidad, additional, Caliebe, Almuth, additional, Caligo, Maria A., additional, Calvello, Mariarosaria, additional, Capone, Gabriele L., additional, Caputo, Sandrine M., additional, Carnevali, Ileana, additional, Carrasco, Estela, additional, Caux‐Moncoutier, Virginie, additional, Cavalli, Pietro, additional, Cini, Giulia, additional, Clarke, Edward M., additional, Concolino, Paola, additional, Cops, Elisa J., additional, Cortesi, Laura, additional, Couch, Fergus J., additional, Darder, Esther, additional, Hoya, Miguel, additional, Dean, Michael, additional, Debatin, Irmgard, additional, Del Valle, Jesús, additional, Delnatte, Capucine, additional, Derive, Nicolas, additional, Diez, Orland, additional, Ditsch, Nina, additional, Domchek, Susan M., additional, Dutrannoy, Véronique, additional, Eccles, Diana M., additional, Ehrencrona, Hans, additional, Enders, Ute, additional, Evans, D. Gareth, additional, Farra, Chantal, additional, Faust, Ulrike, additional, Felbor, Ute, additional, Feroce, Irene, additional, Fine, Miriam, additional, Foulkes, William D., additional, Galvao, Henrique C.R., additional, Gambino, Gaetana, additional, Gehrig, Andrea, additional, Gensini, Francesca, additional, Gerdes, Anne‐Marie, additional, Germani, Aldo, additional, Giesecke, Jutta, additional, Gismondi, Viviana, additional, Gómez, Carolina, additional, Garcia, Encarna B., additional, González, Sara, additional, Grau, Elia, additional, Grill, Sabine, additional, Gross, Eva, additional, Guerrieri‐Gonzaga, Aliana, additional, Guillaud‐Bataille, Marine, additional, Gutiérrez‐Enríquez, Sara, additional, Haaf, Thomas, additional, Hackmann, Karl, additional, Hansen, Thomas V.O., additional, Harris, Marion, additional, Hauke, Jan, additional, Heinrich, Tilman, additional, Hellebrand, Heide, additional, Herold, Karen N., additional, Honisch, Ellen, additional, Horvath, Judit, additional, Houdayer, Claude, additional, Hübbel, Verena, additional, Iglesias, Silvia, additional, Izquierdo, Angel, additional, James, Paul A., additional, Janssen, Linda A.M., additional, Jeschke, Udo, additional, Kaulfuß, Silke, additional, Keupp, Katharina, additional, Kiechle, Marion, additional, Kölbl, Alexandra, additional, Krieger, Sophie, additional, Kruse, Torben A., additional, Kvist, Anders, additional, Lalloo, Fiona, additional, Larsen, Mirjam, additional, Lattimore, Vanessa L., additional, Lautrup, Charlotte, additional, Ledig, Susanne, additional, Leinert, Elena, additional, Lewis, Alexandra L., additional, Lim, Joanna, additional, Loeffler, Markus, additional, López‐Fernández, Adrià, additional, Lucci‐Cordisco, Emanuela, additional, Maass, Nicolai, additional, Manoukian, Siranoush, additional, Marabelli, Monica, additional, Matricardi, Laura, additional, Meindl, Alfons, additional, Michelli, Rodrigo D., additional, Moghadasi, Setareh, additional, Moles‐Fernández, Alejandro, additional, Montagna, Marco, additional, Montalban, Gemma, additional, Monteiro, Alvaro N., additional, Montes, Eva, additional, Mori, Luigi, additional, Moserle, Lidia, additional, Müller, Clemens R., additional, Mundhenke, Christoph, additional, Naldi, Nadia, additional, Nathanson, Katherine L., additional, Navarro, Matilde, additional, Nevanlinna, Heli, additional, Nichols, Cassandra B., additional, Niederacher, Dieter, additional, Nielsen, Henriette R., additional, Ong, Kai‐ren, additional, Pachter, Nicholas, additional, Palmero, Edenir I., additional, Papi, Laura, additional, Pedersen, Inge Sokilde, additional, Peissel, Bernard, additional, Perez‐Segura, Pedro, additional, Pfeifer, Katharina, additional, Pineda, Marta, additional, Pohl‐Rescigno, Esther, additional, Poplawski, Nicola K., additional, Porfirio, Berardino, additional, Quante, Anne S., additional, Ramser, Juliane, additional, Reis, Rui M., additional, Revillion, Françoise, additional, Rhiem, Kerstin, additional, Riboli, Barbara, additional, Ritter, Julia, additional, Rivera, Daniela, additional, Rofes, Paula, additional, Rump, Andreas, additional, Salinas, Monica, additional, Sánchez de Abajo, Ana María, additional, Schmidt, Gunnar, additional, Schoenwiese, Ulrike, additional, Seggewiß, Jochen, additional, Solanes, Ares, additional, Steinemann, Doris, additional, Stiller, Mathias, additional, Stoppa‐Lyonnet, Dominique, additional, Sullivan, Kelly J., additional, Susman, Rachel, additional, Sutter, Christian, additional, Tavtigian, Sean V., additional, Teo, Soo H., additional, Teulé, Alex, additional, Thomassen, Mads, additional, Tibiletti, Maria Grazia, additional, Tischkowitz, Marc, additional, Tognazzo, Silvia, additional, Toland, Amanda E., additional, Tornero, Eva, additional, Törngren, Therese, additional, Torres‐Esquius, Sara, additional, Toss, Angela, additional, Trainer, Alison H., additional, Tucker, Katherine M., additional, Asperen, Christi J., additional, Mackelenbergh, Marion T., additional, Varesco, Liliana, additional, Vargas‐Parra, Gardenia, additional, Varon, Raymonda, additional, Vega, Ana, additional, Velasco, Ángela, additional, Vesper, Anne‐Sophie, additional, Viel, Alessandra, additional, Vreeswijk, Maaike P. G., additional, Wagner, Sebastian A., additional, Waha, Anke, additional, Walker, Logan C., additional, Walters, Rhiannon J., additional, Wang‐Gohrke, Shan, additional, Weber, Bernhard H. F., additional, Weichert, Wilko, additional, Wieland, Kerstin, additional, Wiesmüller, Lisa, additional, Witzel, Isabell, additional, Wöckel, Achim, additional, Woodward, Emma R., additional, Zachariae, Silke, additional, Zampiga, Valentina, additional, Zeder‐Göß, Christine, additional, Investigators, KConFab, additional, Lázaro, Conxi, additional, Nicolo, Arcangela, additional, Radice, Paolo, additional, Engel, Christoph, additional, Schmutzler, Rita K., additional, Goldgar, David E., additional, and Spurdle, Amanda B., additional
Published: 2019
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29. Large scale multifactorial likelihood quantitative analysis of BRCA1 and BRCA2 variants: An ENIGMA resource to support clinical variant classification

Author: Parsons, Michael T., Tudini, Emma, Li, Hongyan, Hahnen, Eric, Wappenschmidt, Barbara, Feliubadalo, Lidia, Aalfs, Cora M., Agata, Simona, Aittomaki, Kristiina, Alducci, Elisa, Concepcion Alonso-Cerezo, Maria, Arnold, Norbert, Auber, Bernd, Austin, Rachel, Azzollini, Jacopo, Balmana, Judith, Barbieri, Elena, Bartram, Claus R., Blanco, Ana, Bluemcke, Britta, Bonache, Sandra, Bonanni, Bernardo, Borg, Ake, Bortesi, Beatrice, Brunet, Joan, Bruzzone, Carla, Bucksch, Karolin, Cagnoli, Giulia, Caldes, Trinidad, Caliebe, Almuth, Caligo, Maria A., Calvello, Mariarosaria, Capone, Gabriele L., Caputo, Sandrine M., Carnevali, Ileana, Carrasco, Estela, Caux-Moncoutier, Virginie, Cavalli, Pietro, Cini, Giulia, Clarke, Edward M., Concolino, Paola, Cops, Elisa J., Cortesi, Laura, Couch, Fergus J., Darder, Esther, de la Hoya, Miguel, Dean, Michael, Debatin, Irmgard, Del Valle, Jesus, Delnatte, Capucine, Derive, Nicolas, Diez, Orland, Ditsch, Nina, Domchek, Susan M., Dutrannoy, Veronique, Eccles, Diana M., Ehrencrona, Hans, Enders, Ute, Evans, D. Gareth, Farra, Chantal, Faust, Ulrike, Felbor, Ute, Feroce, Irene, Fine, Miriam, Foulkes, William D., Galvao, Henrique Cr, Gambino, Gaetana, Gehrig, Andrea, Gensini, Francesca, Gerdes, Anne-Marie, Germani, Aldo, Giesecke, Jutta, Gismondi, Viviana, Gomez, Carolina, Garcia, Encarna B. Gomez, Gonzalez, Sara, Grau, Elia, Grill, Sabine, Gross, Eva, Guerrieri-Gonzaga, Aliana, Guillaud-Bataille, Marine, Gutierrez-Enriquez, Sara, Haaf, Thomas, Hackmann, Karl, Hansen, Thomas Vo, Harris, Marion, Hauke, Jan, Heinrich, Tilman, Hellebrand, Heide, Herold, Karen N., Honisch, Ellen, Horvath, Judit, Houdayer, Claude, Huebbel, Verena, Iglesias, Silvia, Izquierdo, Angel, James, Paul A., Janssen, Linda Am, Jeschke, Udo, Kaulfuss, Silke, Keupp, Katharina, Kiechle, Marion, Koelbl, Alexandra, Krieger, Sophie, Kruse, Torben A., Kvist, Anders, Lalloo, Fiona, Larsen, Mirjam, Lattimore, Vanessa L., Lautrup, Charlotte, Ledig, Susanne, Leinert, Elena, Lewis, Alexandra L., Lim, Joanna, Loeffler, Markus, Lopez-Fernandez, Adria, Lucci-Cordisco, Emanuela, Maass, Nicolai, Manoukian, Siranoush, Marabelli, Monica, Matricardi, Laura, Meindl, Alfons, Michelli, Rodrigo D., Moghadasi, Setareh, Moles-Fernandez, Alejandro, Montagna, Marco, Montalban, Gemma, Monteiro, Alvaro N., Montes, Eva, Mori, Luigi, Moserle, Lidia, Mueller, Clemens R., Mundhenke, Christoph, Naldi, Nadia, Nathanson, Katherine L., Navarro, Matilde, Nevanlinna, Heli, Nichols, Cassandra B., Niederacher, Dieter, Nielsen, Henriette R., Ong, Kai-ren, Pachter, Nicholas, Palmero, Edenir, I, Papi, Laura, Pedersen, Inge Sokilde, Peissel, Bernard, Perez-Segura, Pedro, Pfeifer, Katharina, Pineda, Marta, Pohl-Rescigno, Esther, Poplawski, Nicola K., Porfirio, Berardino, Quante, Anne S., Ramser, Juliane, Reis, Rui M., Revillion, Francoise, Rhiem, Kerstin, Riboli, Barbara, Ritter, Julia, Rivera, Daniela, Rofes, Paula, Rump, Andreas, Salinas, Monica, Sanchez de Abajo, Ana Maria, Schmidt, Gunnar, Schoenwiese, Ulrike, Seggewiss, Jochen, Solanes, Ares, Steinemann, Doris, Stiller, Mathias, Stoppa-Lyonnet, Dominique, Sullivan, Kelly J., Susman, Rachel, Sutter, Christian, Tavtigian, Sean, V, Teo, Soo H., Teule, Alex, Thomassen, Mads, Tibiletti, Maria Grazia, Tischkowitz, Marc, Tognazzo, Silvia, Toland, Amanda E., Tornero, Eva, Torngren, Therese, Torres-Esquius, Sara, Toss, Angela, Trainer, Alison H., Tucker, Katherine M., van Asperen, Christi J., van Mackelenbergh, Marion T., Varesco, Liliana, Vargas-Parra, Gardenia, Varon, Raymonda, Vega, Ana, Velasco, Angela, Vesper, Anne-Sophie, Viel, Alessandra, Vreeswijk, Maaike P. G., Wagner, Sebastian A., Waha, Anke, Walker, Logan C., Walters, Rhiannon J., Wang-Gohrke, Shan, Weber, Bernhard H. F., Weichert, Wilko, Wieland, Kerstin, Wiesmueller, Lisa, Witzel, Isabell, Woeckel, Achim, Woodward, Emma R., Zachariae, Silke, Zampiga, Valentina, Zeder-Goss, Christine, Lazaro, Conxi, De Nicolo, Arcangela, Radice, Paolo, Engel, Christoph, Schmutzler, Rita K., Goldgar, David E., Spurdle, Amanda B., Parsons, Michael T., Tudini, Emma, Li, Hongyan, Hahnen, Eric, Wappenschmidt, Barbara, Feliubadalo, Lidia, Aalfs, Cora M., Agata, Simona, Aittomaki, Kristiina, Alducci, Elisa, Concepcion Alonso-Cerezo, Maria, Arnold, Norbert, Auber, Bernd, Austin, Rachel, Azzollini, Jacopo, Balmana, Judith, Barbieri, Elena, Bartram, Claus R., Blanco, Ana, Bluemcke, Britta, Bonache, Sandra, Bonanni, Bernardo, Borg, Ake, Bortesi, Beatrice, Brunet, Joan, Bruzzone, Carla, Bucksch, Karolin, Cagnoli, Giulia, Caldes, Trinidad, Caliebe, Almuth, Caligo, Maria A., Calvello, Mariarosaria, Capone, Gabriele L., Caputo, Sandrine M., Carnevali, Ileana, Carrasco, Estela, Caux-Moncoutier, Virginie, Cavalli, Pietro, Cini, Giulia, Clarke, Edward M., Concolino, Paola, Cops, Elisa J., Cortesi, Laura, Couch, Fergus J., Darder, Esther, de la Hoya, Miguel, Dean, Michael, Debatin, Irmgard, Del Valle, Jesus, Delnatte, Capucine, Derive, Nicolas, Diez, Orland, Ditsch, Nina, Domchek, Susan M., Dutrannoy, Veronique, Eccles, Diana M., Ehrencrona, Hans, Enders, Ute, Evans, D. Gareth, Farra, Chantal, Faust, Ulrike, Felbor, Ute, Feroce, Irene, Fine, Miriam, Foulkes, William D., Galvao, Henrique Cr, Gambino, Gaetana, Gehrig, Andrea, Gensini, Francesca, Gerdes, Anne-Marie, Germani, Aldo, Giesecke, Jutta, Gismondi, Viviana, Gomez, Carolina, Garcia, Encarna B. Gomez, Gonzalez, Sara, Grau, Elia, Grill, Sabine, Gross, Eva, Guerrieri-Gonzaga, Aliana, Guillaud-Bataille, Marine, Gutierrez-Enriquez, Sara, Haaf, Thomas, Hackmann, Karl, Hansen, Thomas Vo, Harris, Marion, Hauke, Jan, Heinrich, Tilman, Hellebrand, Heide, Herold, Karen N., Honisch, Ellen, Horvath, Judit, Houdayer, Claude, Huebbel, Verena, Iglesias, Silvia, Izquierdo, Angel, James, Paul A., Janssen, Linda Am, Jeschke, Udo, Kaulfuss, Silke, Keupp, Katharina, Kiechle, Marion, Koelbl, Alexandra, Krieger, Sophie, Kruse, Torben A., Kvist, Anders, Lalloo, Fiona, Larsen, Mirjam, Lattimore, Vanessa L., Lautrup, Charlotte, Ledig, Susanne, Leinert, Elena, Lewis, Alexandra L., Lim, Joanna, Loeffler, Markus, Lopez-Fernandez, Adria, Lucci-Cordisco, Emanuela, Maass, Nicolai, Manoukian, Siranoush, Marabelli, Monica, Matricardi, Laura, Meindl, Alfons, Michelli, Rodrigo D., Moghadasi, Setareh, Moles-Fernandez, Alejandro, Montagna, Marco, Montalban, Gemma, Monteiro, Alvaro N., Montes, Eva, Mori, Luigi, Moserle, Lidia, Mueller, Clemens R., Mundhenke, Christoph, Naldi, Nadia, Nathanson, Katherine L., Navarro, Matilde, Nevanlinna, Heli, Nichols, Cassandra B., Niederacher, Dieter, Nielsen, Henriette R., Ong, Kai-ren, Pachter, Nicholas, Palmero, Edenir, I, Papi, Laura, Pedersen, Inge Sokilde, Peissel, Bernard, Perez-Segura, Pedro, Pfeifer, Katharina, Pineda, Marta, Pohl-Rescigno, Esther, Poplawski, Nicola K., Porfirio, Berardino, Quante, Anne S., Ramser, Juliane, Reis, Rui M., Revillion, Francoise, Rhiem, Kerstin, Riboli, Barbara, Ritter, Julia, Rivera, Daniela, Rofes, Paula, Rump, Andreas, Salinas, Monica, Sanchez de Abajo, Ana Maria, Schmidt, Gunnar, Schoenwiese, Ulrike, Seggewiss, Jochen, Solanes, Ares, Steinemann, Doris, Stiller, Mathias, Stoppa-Lyonnet, Dominique, Sullivan, Kelly J., Susman, Rachel, Sutter, Christian, Tavtigian, Sean, V, Teo, Soo H., Teule, Alex, Thomassen, Mads, Tibiletti, Maria Grazia, Tischkowitz, Marc, Tognazzo, Silvia, Toland, Amanda E., Tornero, Eva, Torngren, Therese, Torres-Esquius, Sara, Toss, Angela, Trainer, Alison H., Tucker, Katherine M., van Asperen, Christi J., van Mackelenbergh, Marion T., Varesco, Liliana, Vargas-Parra, Gardenia, Varon, Raymonda, Vega, Ana, Velasco, Angela, Vesper, Anne-Sophie, Viel, Alessandra, Vreeswijk, Maaike P. G., Wagner, Sebastian A., Waha, Anke, Walker, Logan C., Walters, Rhiannon J., Wang-Gohrke, Shan, Weber, Bernhard H. F., Weichert, Wilko, Wieland, Kerstin, Wiesmueller, Lisa, Witzel, Isabell, Woeckel, Achim, Woodward, Emma R., Zachariae, Silke, Zampiga, Valentina, Zeder-Goss, Christine, Lazaro, Conxi, De Nicolo, Arcangela, Radice, Paolo, Engel, Christoph, Schmutzler, Rita K., Goldgar, David E., and Spurdle, Amanda B.
Abstract: The multifactorial likelihood analysis method has demonstrated utility for quantitative assessment of variant pathogenicity for multiple cancer syndrome genes. Independent data types currently incorporated in the model for assessing BRCA1 and BRCA2 variants include clinically calibrated prior probability of pathogenicity based on variant location and bioinformatic prediction of variant effect, co-segregation, family cancer history profile, co-occurrence with a pathogenic variant in the same gene, breast tumor pathology, and case-control information. Research and clinical data for multifactorial likelihood analysis were collated for 1,395 BRCA1/2 predominantly intronic and missense variants, enabling classification based on posterior probability of pathogenicity for 734 variants: 447 variants were classified as (likely) benign, and 94 as (likely) pathogenic; and 248 classifications were new or considerably altered relative to ClinVar submissions. Classifications were compared with information not yet included in the likelihood model, and evidence strengths aligned to those recommended for ACMG/AMP classification codes. Altered mRNA splicing or function relative to known nonpathogenic variant controls were moderately to strongly predictive of variant pathogenicity. Variant absence in population datasets provided supporting evidence for variant pathogenicity. These findings have direct relevance for BRCA1 and BRCA2 variant evaluation, and justify the need for gene-specific calibration of evidence types used for variant classification.
Published: 2019

30. Multiple-gene panel analysis in a case series of 255 women with hereditary breast and ovarian cancer

Author: Tedaldi, Gianluca, primary, Tebaldi, Michela, additional, Zampiga, Valentina, additional, Danesi, Rita, additional, Arcangeli, Valentina, additional, Ravegnani, Mila, additional, Cangini, Ilaria, additional, Pirini, Francesca, additional, Petracci, Elisabetta, additional, Rocca, Andrea, additional, Falcini, Fabio, additional, Amadori, Dino, additional, and Calistri, Daniele, additional
Published: 2017
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31. BRCA1 p.His1673del is a pathogenic mutation associated with a predominant ovarian cancer phenotype

Author: Zuntini, Roberta, primary, Cortesi, Laura, additional, Calistri, Daniele, additional, Pippucci, Tommaso, additional, Martelli, Pier Luigi, additional, Casadio, Rita, additional, Capizzi, Elisa, additional, Santini, Donatella, additional, Miccoli, Sara, additional, Medici, Veronica, additional, Danesi, Rita, additional, Marchi, Isabella, additional, Zampiga, Valentina, additional, Fiorentino, Michelangelo, additional, Ferrari, Simona, additional, and Turchetti, Daniela, additional
Published: 2017
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32. Coexistence of Two Novel Mutations in CDKN2A and PMS1 Genes in a Single Patient Identifies a New and Severe Cancer Predisposition Syndrome

Author: Cassone, Marco, primary, Salehi, Leila Baghernajad, additional, Tedaldi, Gianluca, additional, Tebaldi, Michela, additional, Zampiga, Valentina, additional, Biancolella, Michela, additional, Testa, Barbara, additional, Calistri, Daniele, additional, Mastrogiorgio, Gerarda, additional, Lanciotti, Silvia, additional, D'Apice, Maria Rosaria, additional, Novelli, Giuseppe, additional, and Sangiuolo, Federica, additional
Published: 2017
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33. Multiple Primary Tumors in a Family with Li-Fraumeni Syndrome with a TP53 Germline Mutation Identified by Next-Generation Sequencing

Author: Zampiga, Valentina, primary, Danesi, Rita, additional, Tedaldi, Gianluca, additional, Tebaldi, Michela, additional, Cangini, Ilaria, additional, Pirini, Francesca, additional, Pittureri, Cristina, additional, Amaducci, Elena, additional, Guidi, Luciano, additional, Faedi, Marina, additional, Amadori, Dino, additional, Falcini, Fabio, additional, and Calistri, Daniele, additional
Published: 2016
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34. First evidence of a large CHEK2 duplication involved in cancer predisposition in an Italian family with hereditary breast cancer

Author: Tedaldi, Gianluca, primary, Danesi, Rita, additional, Zampiga, Valentina, additional, Tebaldi, Michela, additional, Bedei, Lucia, additional, Zoli, Wainer, additional, Amadori, Dino, additional, Falcini, Fabio, additional, and Calistri, Daniele, additional
Published: 2014
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35. Disease family history and modification of breast cancer risk in common BRCA2 variants

Author: Seymour, Ian, primary, Casadei, Silvia, additional, Zampiga, Valentina, additional, Rosato, Simonetta, additional, Danesi, Rita, additional, Falcini, Fabio, additional, Strada, Miria, additional, Morini, Nori, additional, Naldoni, Carlo, additional, Paradiso, Angelo, additional, Tommasi, Stefania, additional, Schittulli, Francesco, additional, Amadori, Dino, additional, and Calistri, Daniele, additional
Published: 2008
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36. Results of a population-based screening for hereditary breast cancer in a region of North-Central Italy: contribution of BRCA1/2 germ-line mutations

Author: Seymour, Ian J., primary, Casadei, Silvia, additional, Zampiga, Valentina, additional, Rosato, Simonetta, additional, Danesi, Rita, additional, Scarpi, Emanuela, additional, Falcini, Fabio, additional, Strada, Miria, additional, Morini, Nori, additional, Naldoni, Carlo, additional, Amadori, Dino, additional, and Calistri, Daniele, additional
Published: 2007
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37. Results of a population-based screening for hereditary breast cancer in a region of North-Central Italy: contribution of BRCA1/ 2 germ-line mutations.

Author: Seymour, Ian, Casadei, Silvia, Zampiga, Valentina, Rosato, Simonetta, Danesi, Rita, Scarpi, Emanuela, Falcini, Fabio, Strada, Miria, Morini, Nori, Naldoni, Carlo, Amadori, Dino, and Calistri, Daniele
Abstract: BRCA1/2 mutation status is of paramount importance to identify families at risk of Hereditary Breast and Ovarian Cancer (HBOC). Most HBOC and BRCA1/2 mutation studies have focused on highly selected sub-populations, and few data are available for large population cohorts. For this reason, as part of a regional cancer prevention strategy in North-Central Italy, we set up a population-based screening programme to identify all resident HBOC families, and to determine their BRCA1/2 mutation status. To date, 44 different BRCA1/2 variants have been identified in 55 HBOC families. Of the seven newly reported mutations, only BRCA1 Q284X is clearly deleterious. The analysis of clinical disease characteristics in relation to age of disease onset and family history showed a difference between BRCA1/2 wild type and mutation carrier families. Interestingly, BRCA1/2 mutations were significantly more common in women who developed breast cancer ?40 years of age than in BRCA1/2 wild type women (50% vs. 29%, respectively, P = 0.005). The family history selection criteria most likely to indicate the presence of deleterious BRCA1/2 mutations are breast cancer ?35 years ( P = 0.012), two first-degree relatives with breast cancer ?50 years ( P = 0.022), and male breast cancer ( P = 0.047). The penetrance of BRCA1/2 alterations in our cohort seems to be aligned with other published results. However, new data interpretations have emerged in relation to the clinical criteria and the presence of deleterious mutations. This information shows that a correct and accurate clinical selection could avoid unnecessary molecular tests and could better address genetic analysis and clinical management. [ABSTRACT FROM AUTHOR]
Published: 2008
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38. Insights into Genetic Susceptibility to Melanoma by Gene Panel Testing: Potential Pathogenic Variants in ACD, ATM, BAP1, and POT1.

Author: Pastorino, Lorenza, Andreotti, Virginia, Dalmasso, Bruna, Vanni, Irene, Ciccarese, Giulia, Mandalà, Mario, Spadola, Giuseppe, Pizzichetta, Maria Antonietta, Ponti, Giovanni, Tibiletti, Maria Grazia, Sala, Elena, Genuardi, Maurizio, Chiurazzi, Pietro, Maccanti, Gabriele, Manoukian, Siranoush, Sestini, Serena, Danesi, Rita, Zampiga, Valentina, La Starza, Roberta, and Stanganelli, Ignazio
Subjects: GENETIC techniques, MELANOMA, GENETIC mutation, TUMOR markers, DISEASE risk factors
Abstract: The contribution of recently established or candidate susceptibility genes to melanoma missing heritability has yet to be determined. Multigene panel testing could increase diagnostic yield and better define the role of candidate genes. We characterized 273 CDKN2A/ARF and CDK4-negative probands through a custom-designed targeted gene panel that included CDKN2A/ARF, CDK4, ACD, BAP1, MITF, POT1, TERF2IP, ATM, and PALB2. Co-segregation, loss of heterozygosity (LOH)/protein expression analysis, and splicing characterization were performed to improve variant classification. We identified 16 (5.9%) pathogenic and likely pathogenic variants in established high/medium penetrance cutaneous melanoma susceptibility genes (BAP1, POT1, ACD, MITF, and TERF2IP), including two novel variants in BAP1 and 4 in POT1. We also found four deleterious and five likely deleterious variants in ATM (3.3%). Thus, including potentially deleterious variants in ATM increased the diagnostic yield to about 9%. Inclusion of rare variants of uncertain significance would increase the overall detection yield to 14%. At least 10% of melanoma missing heritability may be explained through panel testing in our population. To our knowledge, this is the highest frequency of putative ATM deleterious variants reported in melanoma families, suggesting a possible role in melanoma susceptibility, which needs further investigation. [ABSTRACT FROM AUTHOR]
Published: 2020
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39. BRCA1 p.His1673del is a pathogenic mutation associated with a predominant ovarian cancer phenotype

Author: Elisa Capizzi, Daniela Turchetti, Pier Luigi Martelli, Sara Miccoli, Isabella Marchi, Laura Cortesi, Veronica Medici, Tommaso Pippucci, Rita Danesi, Roberta Zuntini, Simona Ferrari, Valentina Zampiga, Rita Casadio, Donatella Santini, Daniele Calistri, Michelangelo Fiorentino, Zuntini, Roberta, Cortesi, Laura, Calistri, Daniele, Pippucci, Tommaso, Martelli, Pier Luigi, Casadio, Rita, Capizzi, Elisa, Santini, Donatella, Miccoli, Sara, Medici, Veronica, Danesi, Rita, Marchi, Isabella, Zampiga, Valentina, Fiorentino, Michelangelo, Ferrari, Simona, and Turchetti, Daniela
Subjects: Adult, 0301 basic medicine, endocrine system diseases, Loss of Heterozygosity, Breast Neoplasms, Locus (genetics), Biology, 03 medical and health sciences, Breast cancer, 0302 clinical medicine, Ovarian cancer, Biomarkers, Tumor, medicine, Humans, Genetic Predisposition to Disease, Genetic Testing, Aged, Neoplasm Staging, Sequence Deletion, Ovarian Neoplasms, Genetics, BRCA1 Protein, Pathogenic mutation, Haplotype, Brca1 protein, Middle Aged, Prognosis, BRCA1, medicine.disease, Pedigree, Hereditary cancer, VUS, Phenotype, 030104 developmental biology, Haplotypes, Oncology, 030220 oncology & carcinogenesis, Ovarian carcinomas, Female, Hereditary Cancer, Research Paper
Abstract: // Roberta Zuntini 1 , Laura Cortesi 2 , Daniele Calistri 3 , Tommaso Pippucci 1 , Pier Luigi Martelli 4 , Rita Casadio 4 , Elisa Capizzi 5 , Donatella Santini 5 , Sara Miccoli 1 , Veronica Medici 2 , Rita Danesi 3 , Isabella Marchi 2 , Valentina Zampiga 3 , Michelangelo Fiorentino 5 , Simona Ferrari 1 , Daniela Turchetti 1 1 Dipartimento di Scienze Mediche e Chirurgiche, Centro di Ricerca sui Tumori Ereditari, UO Genetica Medica, Universita di Bologna, Bologna, Italy 2 Dipartimento di Oncologia ed Ematologia, Azienda Ospedaliero-Universitaria Policlinico di Modena, Modena, Italy 3 Istituto Scientifico Romagnolo per lo Studio e la Cura dei Tumori (IRST) IRCCS, Meldola, Italy 4 Biocomputing Group, BIGEA/Giorgio Prodi Interdepartmental Center for Cancer Research, Universita di Bologna, Bologna, Italy 5 UO Anatomia Patologica, Azienda Ospedaliero-Universitaria di Bologna Policlinico S.Orsola-Malpighi, Bologna, Italy Correspondence to: Daniela Turchetti, email: daniela.turchetti@unibo.it Keywords: BRCA1, ovarian cancer, hereditary cancer, VUS, breast cancer Received: October 24, 2016 Accepted: January 26, 2017 Published: February 07, 2017 ABSTRACT We have investigated the clinical significance of the BRCA1 variant p.His1673del in 14 families from the Emilia-Romagna region of Italy, including 20 breast and 23 ovarian cancer cases; four families displayed site-specific ovarian cancer. The variant, absent in human variation databases, has been reported three times in BRCA1 specific databases; all probands shared the same rare haplotype at the BRCA1 locus, consistent with a common ancestor. The multifactorial likelihood method by Goldgar, used to estimate the probability of the variant being causative, gave a ratio of 2,263,474:1 in favor of causality. Moreover, in silico modeling suggested that His1673-lacking BRCA1 protein may have a decreased ability to bind BARD1 and other related proteins. All six ovarian carcinomas and two out of four breast carcinomas available showed a loss of the BRCA1 wild-type allele, which in three out of four ovarian carcinomas analyzed by FISH was associated with duplication of the chromosome 17 containing the variant. Although the pathogenicity of the allele is strongly supported by the multifactorial ratio,we cannot exclude that p.His1673del is not itself deleterious, but is linked to another undetected mutation on the same ancestral allele.
Published: 2017
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40. Evaluation of an Italian Population-Based Programme for Risk Assessment and Genetic Counselling and Testing for BRCA1/2-Related Hereditary Breast and Ovarian Cancer after 10 Years of Operation: An Observational Study Protocol.

Author: Ferretti S, Sassoli de Bianchi P, Canuti D, Campari C, Cortesi L, Arcangeli V, Barbieri E, D'Aloia C, Danesi R, De Iaco P, De Lillo M, Lombardo L, Moretti G, Musolino A, Palli D, Palmonari C, Ravegnani M, Tafà A, Tononi A, Turchetti D, Zamagni C, Zampiga V, Bucchi L, and The Hboc Study Group
Abstract: Hereditary breast/ovarian cancer (HBOC) syndrome is caused by the inheritance of monoallelic germline BRCA1/2 gene mutations. If BRCA1/2 mutation carriers are identified before the disease develops, effective actions against HBOC can be taken, including intensive screening, risk-reducing mastectomy and salpingo-oophorectomy, and risk-reducing medications. The Italian National Prevention Plan mandates the creation of regional BRCA genetic testing programmes. So far, however, only informal data have been reported on their implementation. We have designed a study aimed at evaluating the results of a population-based programme for risk assessment and genetic counselling and testing for BRCA1/2-related HBOC that is underway in the Emilia-Romagna region (northern Italy). The programme-which is entirely free-includes basic screening with an estimate of the likelihood of carrying a BRCA1/2 mutation using a familial risk assessment tool, a closer examination of women with suspected risk increase, an assessment of the need for further genetic counselling and, if needed, genetic testing and risk-reducing interventions. In this paper, the design of the programme and the protocol of the study are presented. The study has an observational, historical cohort design. Eligible are the women found to be at an increased risk of HBOC (profile 3 women). The main objectives are (i) to determine the precision of the programme in measuring the level of risk of HBOC for profile 3 women; (ii) to determine the characteristics of profile 3 women and their association with the risk management strategy chosen; (iii) to compare the age at onset, histologic type, tumour stage, molecular subtype, and prognosis of breast/ovarian cancers observed in the cohort of profile 3 women with the features of sporadic cancers observed in the general female population; (iv) to determine the level and the determinants of adherence to recommendations; and (v) to determine the appropriateness and timing of risk-reducing surgery and medications. Investigating the quality and results of the programme is necessary because the best practices in risk assessment and genetic counselling and testing for BRCA1/2-related cancer and the challenges they encounter should be identified and shared. The study has the potential to provide sound empirical evidence for the factors affecting the effectiveness of this type of service.
Published: 2024
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41. ENIGMA CHEK2gether Project: A Comprehensive Study Identifies Functionally Impaired CHEK2 Germline Missense Variants Associated with Increased Breast Cancer Risk.

Author: Stolarova L, Kleiblova P, Zemankova P, Stastna B, Janatova M, Soukupova J, Achatz MI, Ambrosone C, Apostolou P, Arun BK, Auer P, Barnard M, Bertelsen B, Blok MJ, Boddicker N, Brunet J, Burnside ES, Calvello M, Campbell I, Chan SH, Chen F, Chiang JB, Coppa A, Cortesi L, Crujeiras-González A, De Leeneer K, De Putter R, DePersia A, Devereux L, Domchek S, Efremidis A, Engel C, Ernst C, Evans DGR, Feliubadaló L, Fostira F, Fuentes-Ríos O, Gómez-García EB, González S, Haiman C, Hansen TVO, Hauke J, Hodge J, Hu C, Huang H, Ishak NDB, Iwasaki Y, Konstantopoulou I, Kraft P, Lacey J, Lázaro C, Li N, Lim WK, Lindstrom S, Lori A, Martinez E, Martins A, Matsuda K, Matullo G, McInerny S, Michailidou K, Montagna M, Monteiro ANA, Mori L, Nathanson K, Neuhausen SL, Nevanlinna H, Olson JE, Palmer J, Pasini B, Patel A, Piane M, Poppe B, Radice P, Renieri A, Resta N, Richardson ME, Rosseel T, Ruddy KJ, Santamariña M, Dos Santos ES, Teras L, Toland AE, Trentham-Dietz A, Vachon CM, Volk AE, Weber-Lassalle N, Weitzel JN, Wiesmuller L, Winham S, Yadav S, Yannoukakos D, Yao S, Zampiga V, Zethoven M, Zhang ZW, Zima T, Spurdle AB, Vega A, Rossing M, Del Valle J, De Nicolo A, Hahnen E, Claes KBM, Ngeow J, Momozawa Y, James PA, Couch FJ, Macurek L, and Kleibl Z
Subjects: Humans, Female, Genetic Predisposition to Disease, Checkpoint Kinase 2 genetics, Mutation, Missense, Germ-Line Mutation, Germ Cells, Breast Neoplasms epidemiology, Breast Neoplasms genetics
Abstract: Purpose: Germline pathogenic variants in CHEK2 confer moderately elevated breast cancer risk (odds ratio, OR ∼ 2.5), qualifying carriers for enhanced breast cancer screening. Besides pathogenic variants, dozens of missense CHEK2 variants of uncertain significance (VUS) have been identified, hampering the clinical utility of germline genetic testing (GGT)., Experimental Design: We collected 460 CHEK2 missense VUS identified by the ENIGMA consortium in 15 countries. Their functional characterization was performed using CHEK2-complementation assays quantifying KAP1 phosphorylation and CHK2 autophosphorylation in human RPE1-CHEK2-knockout cells. Concordant results in both functional assays were used to categorize CHEK2 VUS from 12 ENIGMA case-control datasets, including 73,048 female patients with breast cancer and 88,658 ethnicity-matched controls., Results: A total of 430/460 VUS were successfully analyzed, of which 340 (79.1%) were concordant in both functional assays and categorized as functionally impaired (N = 102), functionally intermediate (N = 12), or functionally wild-type (WT)-like (N = 226). We then examined their association with breast cancer risk in the case-control analysis. The OR and 95% CI (confidence intervals) for carriers of functionally impaired, intermediate, and WT-like variants were 2.83 (95% CI, 2.35-3.41), 1.57 (95% CI, 1.41-1.75), and 1.19 (95% CI, 1.08-1.31), respectively. The meta-analysis of population-specific datasets showed similar results., Conclusions: We determined the functional consequences for the majority of CHEK2 missense VUS found in patients with breast cancer (3,660/4,436; 82.5%). Carriers of functionally impaired missense variants accounted for 0.5% of patients with breast cancer and were associated with a moderate risk similar to that of truncating CHEK2 variants. In contrast, 2.2% of all patients with breast cancer carried functionally wild-type/intermediate missense variants with no clinically relevant breast cancer risk in heterozygous carriers., (©2023 The Authors; Published by the American Association for Cancer Research.)
Published: 2023
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42. The Spectrum of FANCM Protein Truncating Variants in European Breast Cancer Cases.

Author: Figlioli G, Kvist A, Tham E, Soukupova J, Kleiblova P, Muranen TA, Andrieu N, Azzollini J, Balmaña J, Barroso A, Benítez J, Bertelsen B, Blanco A, Bonanni B, Borg Å, Brunet J, Calistri D, Calvello M, Chvojka S, Cortesi L, Darder E, Del Valle J, Diez O, Eon-Marchais S, Fostira F, Gensini F, Houdayer C, Janatova M, Kiiski JI, Konstantopoulou I, Kubelka-Sabit K, Lázaro C, Lesueur F, Manoukian S, Marcinkute R, Mickys U, Moncoutier V, Myszka A, Nguyen-Dumont T, Nielsen FC, Norvilas R, Olah E, Osorio A, Papi L, Peissel B, Peixoto A, Plaseska-Karanfilska D, Pócza T, Rossing M, Rudaitis V, Santamariña M, Santos C, Smichkoska S, Southey MC, Stoppa-Lyonnet D, Teixeira M, Törngren T, Toss A, Urioste M, Vega A, Vlckova Z, Yannoukakos D, Zampiga V, Kleibl Z, Radice P, Nevanlinna H, Ehrencrona H, Janavicius R, and Peterlongo P
Abstract: Germline protein truncating variants (PTVs) in the FANCM gene have been associated with a 2-4-fold increased breast cancer risk in case-control studies conducted in different European populations. However, the distribution and the frequency of FANCM PTVs in Europe have never been investigated. In the present study, we collected the data of 114 European female breast cancer cases with FANCM PTVs ascertained in 20 centers from 13 European countries. We identified 27 different FANCM PTVs. The p.Gln1701* PTV is the most common PTV in Northern Europe with a maximum frequency in Finland and a lower relative frequency in Southern Europe. On the contrary, p.Arg1931* seems to be the most common PTV in Southern Europe. We also showed that p.Arg658*, the third most common PTV, is more frequent in Central Europe, and p.Gln498Thrfs*7 is probably a founder variant from Lithuania. Of the 23 rare or unique FANCM PTVs, 15 have not been previously reported. We provide here the initial spectrum of FANCM PTVs in European breast cancer cases., Competing Interests: The authors declare no conflict of interest.
Published: 2020
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