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Transcriptome-wide association studies (TWASs), as a practical and prevalent approach for detecting the associations between genetically regulated genes and traits, are now leading to a better understanding of the complex mechanisms of genetic variants in regulating various diseases and traits. Despite the ever-increasing TWAS outputs, there is still a lack of databases curating massive public TWAS information and knowledge. To fill this gap, here we present TWAS Atlas (https://ngdc.cncb.ac.cn/twas/), an integrated knowledgebase of TWAS findings manually curated from extensive literature. In the current implementation, TWAS Atlas collects 401,266 high-quality human gene–trait associations from 200 publications, covering 22,247 genes and 257 traits across 135 tissue types. In particular, an interactive knowledge graph of the collected gene–trait associations is constructed together with single nucleotide polymorphism (SNP)–gene associations to build up comprehensive regulatory networks at multi-omics levels. In addition, TWAS Atlas, as a user-friendly web interface, efficiently enables users to browse, search and download all association information, relevant research metadata and annotation information of interest. Taken together, TWAS Atlas is of great value for promoting the utility and availability of TWAS results in explaining the complex genetic basis as well as providing new insights for human health and disease research.

Two tetranuclear coordination clusters and four dinuclear heterometallic complexes have been synthesized and their structural analyses, magnetic investigations as well as luminescence studies are reported herein.

With the proliferating studies of human cancers by single-cell RNA sequencing technique (scRNA-seq), cellular heterogeneity, immune landscape and pathogenesis within diverse cancers have been uncovered successively. The exponential explosion of massive cancer scRNA-seq datasets in the past decade are calling for a burning demand to be integrated and processed for essential investigations in tumor microenvironment of various cancer types. To fill this gap, we developed a database of Cancer Single-cell Expression Map (CancerSCEM, https://ngdc.cncb.ac.cn/cancerscem), particularly focusing on a variety of human cancers. To date, CancerSCE version 1.0 consists of 208 cancer samples across 28 studies and 20 human cancer types. A series of uniformly and multiscale analyses for each sample were performed, including accurate cell type annotation, functional gene expressions, cell interaction network, survival analysis and etc. Plus, we visualized CancerSCEM as a user-friendly web interface for users to browse, search, online analyze and download all the metadata as well as analytical results. More importantly and unprecedentedly, the newly-constructed comprehensive online analyzing platform in CancerSCEM integrates seven analyze functions, where investigators can interactively perform cancer scRNA-seq analyses. In all, CancerSCEM paves an informative and practical way to facilitate human cancer studies, and also provides insights into clinical therapy assessments.

Compared with conventional comparative genomics, the recent studies in pan-genomics have provided further insights into species genomic dynamics, taxonomy and identification, pathogenicity and environmental adaptation. To better understand genome characteristics of species of interest and to fully excavate key metabolic and resistant genes and their conservations and variations, here we present ProPan (https://ngdc.cncb.ac.cn/propan), a public database covering 23 archaeal species and 1,481 bacterial species (in a total of 51,882 strains) for comprehensively profiling prokaryotic pan-genome dynamics. By analyzing and integrating these massive datasets, ProPan offers three major aspects for the pan-genome dynamics of the species of interest: 1) the evaluations of various species' characteristics and composition in pan-genome dynamics; 2) the visualization of map association, the functional annotation and presence/absence variation for all contained species' gene clusters; 3) the typical characteristics of the environmental adaptation, including resistance genes prediction of 126 substances (biocide, antimicrobial drug and metal) and evaluation of 31 metabolic cycle processes. Besides, ProPan develops a very user-friendly interface, flexible retrieval and multi-level real-time statistical visualization. Taken together, ProPan will serve as a weighty resource for the studies of prokaryotic pan-genome dynamics, taxonomy and identification as well as environmental adaptation.

A novel [DyIIINaI] complex, [DyNa(L)2(MeOH)]·MeOH (1, H2L = N,N′-bis(2-oxy-3-methoxybenzylidene)-1,2-phenylenediamine), and a zigzag 1D chain based on the [DyIIINaI2] subunit, [DyNa2(L)2(NO3)]n·MeOH (2), were obtained by employing a multidentate Schiff base ligand H2L reacting with Dy(NO3)3·5H2O, NaN3 and NMe4OH·5H2O in MeOH or reacting with Dy(NO3)3·5H2O and NaOH in methanol. Structural analyses revealed that the DyIII in 1 and 2 is sandwiched between two L2− ligands, namely, the DyIII ion was coordinated by four phenoxido O and four amine N atoms from two L2− ligands. SHAPE software calculations and structural analysis indicated that the coordination geometry of DyIII in 1 and 2 is a distorted square antiprism (D4d), but the distortion degree of DyIII in 1 was smaller than that in 2. Additionally, in 1, one NaI is located on one of the N2O2 planes, and the NaI is coordinated by three phenoxido O and three methoxy O atoms from two L2− ligands and one coordinated MeOH molecule. However, in 2, two NaI ions are located on each of the N2O2 planes, in which the coordination environment of each NaI is completed by three phenoxido O atoms, three methoxy O atoms and two O atoms from one NO3− ion. Moreover, the [DyIIINaI2] units are linked into a zigzag 1D chain by nitrate anions. ac magnetic susceptibility measurements revealed that both complexes 1 and 2 exhibit field-induced single ion magnet behavior under a 1000 Oe dc field, with values of the effective energy barrier (Ueff) of 65.33(1) K for 1 and 84.23(1) K for 2. Interestingly, the Ueff values of 1 and 2 are both higher than the corresponding value of 40.1 K for a reported complex with the coordination geometry of a bicapped triangular prism. The moderate SIM performance of 1 and 2 in the Dy(III)-based SIMs with a SAP coordination geometry could be ascribed to the compressed SAP coordination environment of DyIII ions, dipole–dipole interactions and the deviation of the anisotropic axes from the S8 axis.

A pentanuclear heterometallic complex [MnIII4DyIII(HL)4{(py)2CO2}2Cl2](OH) (1, H3L = 2-((2-hydroxybenzylidene)amino)propane-1,3-diol, (py)2C(OH)2 = the gem-diol form of 2,2′-dipyridyl ketone) and a one-dimensional (1D) chain [Mn2Dy(HL)2(hmp)2(CH3COO)2N3]n·H2O (2, Hhmp = 2-pyridinemethanol) were obtained by the assemblies of the H3L ligand and Dy(NO3)3·5H2O with MnCl2·4H2O and 2,2′-dipyridyl ketone or with manganese acetate and 2-pyridinemethanol under different alkaline solutions. In 1, four MnIII ions formed an irregular tetrahedron, in which four MnIII ions were linked with the central DyIII by eight O atoms from HL2− or from (py)2CO22− ligands. In 2, one DyIII and two MnIII formed a [Mn2Dy] unit, in which the metal ions were bridged by one N3− ion and by four O atoms of two HL2− and two hmp− ligands, and then these [Mn2Dy] units were further linked by the O atoms from HL2− ligands and formed a 1D zigzag chain. Magnetic studies indicated that both complexes exhibit slow relaxation behavior, with the effective energy barriers of 7.9 K and 9.6(0) K for 1 and 2, respectively, which might represent new members for the rarely polynuclear Mn–Dy single molecule magnets. The orientations of the easy magnetization axes of DyIII ions in 1 and 2 were estimated by the Magellan program, indicating that the easy axes of DyIII in 1 are nearly directed to C16 and C47 from (py)2CO22− ligands, while the axis in 2 is almost directed to O5 (from the acetate ligand).

An increasing attention has been witnessed to the field of crystal engineering of energetic materials very recently. This study revealed the synthesis, structure, and energetic properties of 4,6-di...

A new Dy Na complex [DyIIINaI(CH3CO2)2(DMF)3(H6C8A)]·4DMF (1, DMF = N,N-dimethylformamide, H8C8A = p-tert-butylcalix[8]arene) was obtained and it was characterized by elemental analyses, IR spectroscopy, single-crystal X-ray diffraction analyses, PXRD and magnetic properties. In 1, one DyIII and one NaIII were linked by two O atoms from two CH3CO2− and the two metal ions were enclosed into a H8C8A. The remaining coordination sites of the DyIII and NaI ions were occupied by three O atoms from three DMF coordinated molecules. The DyIII ion in 1 adopts eight coordinate with a triangular dodecahedron. Magnetic property studies indicated complex 1 show slow magnetic relaxation behavior under 1000 Oe applied dc field. Additionally, the orientation of the anisotropy axis for the DyIII in 1 was estimated by Magellan program and the anisotropic axis is aligned along Dy1-O2 bond with an angle of 12.608°.

Four tetranuclear 3d–4f complexes, namely [Fe2Ln2(L)2(teaH)2(Cl)2](NO3)2·4CH3CN (H2L = N1,N3-bis(3-methoxysalicylidene)diethylenetriamine, teaH3 = triethanolamine, Ln = Dy for 1 and Ln = Gd for 1′) and [Co2Ln2(L)2(pdm)2(CH3COO)2(CH3OH)2](NO3)2·xCH3OH·yH2O (pdmH2 = 2,6-pyridinedimethanol, Ln = Dy, x = 5 and y = 2.5 for 2 and Ln = Gd, x = 6 and y = 1.5 for 2′), have been reported. Two FeIII and two DyIII in 1 formed a zigzag Fe1–Dy1–Dy1a–Fe1a arrangement with a Fe1–Dy1–Dy1a angle of 105.328(3)°. However, in contrast to 1, two CoIII and two DyIII ions in 2 formed a more linear Co1–Dy1–Dy1a–Co1a arrangement with a Co1–Dy1–Dy1a angle of 141.86(2)°. Additionally, two DyIII ions in 1 are eight-coordinated with a triangular dodecahedron geometry, while two DyIII ions in 2 adopt nine-coordination with a muffin geometry. Magnetic studies revealed slow magnetic relaxation behavior for 1, with an energy barrier Ea of 6.9 K. For 2, single molecule magnet behavior was presented under a zero dc field with an effective energy barrier Ueff of 64.0(9) K. Ab initio calculations for 1 and 2 indicate that compared to 2, complex 1 has a larger transversal magnetic moment of its ground Kramers doublets (KD) and a larger value of the tunnelling parameter (Δt) for the exchanged coupled ground state, which may result in poor single molecule magnet behavior for 1.

In this work, we report the syntheses, crystal structures and magnetic properties of three novel Zn–Ln mixed metal complexes, namely [Zn4Dy2(L1)2(L2)2(N3)2]Cl2·2H2O (1), [Zn4Tb2(L1)2(L2)2(Cl)2][ZnN3Cl3]·2H2O (2), and [Zn4Gd2(L1)2(L2)2(Cl)2][ZnN3Cl3]·2H2O (3), in which L12− and L23− were formed from the ligand L [L = N1,N3-bis(3-methoxysalicylidene)diethylenetriamine] through in situ reactions. Interestingly, carbon dioxide in air was absorbed in the process of forming carbamate ligand L23−; this can be ascribed to the insertion of CO2 into M–N amide bonds. Moreover, 1 and 2 represent the first series of 3d–4f SMMs containing carbamate ligands by fixation of CO2 in air. Single-crystal X-ray diffraction analyses reveal that the crystal structures of 1 and 2 are anion-dependent, i.e., the apical positions of the two ZnII ions in 1 and 2 are occupied by an N atom of N3− and by Cl−, respectively. However, the topologies of 2 and 3 are similar. Two ZnII ions and one LnIII (Ln = Dy (1), Tb (2) and Gd (3)) form nearly linear trinuclear [Zn2Ln] units which are double-bridged by two L23− ligands. Magnetic studies reveal that two complexes show single molecule magnet behavior under a direct current (dc) field, with effective energy barriers (Ueff) of 30.66(5) K for 1 and 8.87(3) K for 2. Ab initio calculations reveal that the DyIII ions in 1 and the TbIII ions in 2 are axial in nature; however, a difference in the tunnel splitting of 1 and 2 leads to variation in the magnetization blockades of the two complexes. Theoretical calculations also indicate that the directions of the main magnetic axes severely deviate from the coordination atoms of the first spheres of DyIII and TbIII in 1 and 2; thus further results in poor SMM behavior of the two complexes.

To modulate the molecular symmetry of tetrahedral Dy4 complexes, in this paper, we reported two complexes based on a Dy4 or Dy2Fe2 tetrahedral unit, namely, [Dy4(NO3)(HL)4{(py)2C(OH)O}2](OH)·6CH3CN·0.5H2O (1, H3L = 2-((2-hydroxybenzylidene)amino) propane-1,3-diol, (py)2C(OH)2 = the gem-diol form of di-2-pyridyl ketone) and [Fe4Dy2(μ4-O)(HL)3{(py)2CO2}{(py)2C(OH)O}{(py)2C(OCH3)O}(L′)Cl3]Cl·6CH3CN·3.5H2O (2, H2L′ = 2-amino-1,3-propanediol). In 1, each of the four sides of the Dy4 tetrahedron was constructed from one O atom of one (py)2C(OH)O− ligand and one O atom of one HL12− ligand, one side was constructed from two O atoms of two (py)2C(OH)O− ligands, and the remaining side was not constructed from organic ligands. Consequently, NO3− in 1 adopts an unprecedented η4, η1, η1, μ4 coordination mode, in which one O atom (O17) linked with four DyIII and each of another two O atoms further coordinated with a DyIII ion. For 2, the tetrahedral unit was composed of two DyIII ions and two FeIII ions, and each of the two DyIII ions is further linked with an FeIII ion. Slow relaxation behavior was observed for both complexes, with an energy barrier of 8.73 K for 1 under a zero dc field and 13.80 K for 2 under a 1500 Oe dc field, respectively. The orientations of the magnetic anisotropy of DyIII in 1 and 2 were calculated by the Magellan program, indicating that the easy magnetization axes of the four DyIII ions in 1 were not directed to O17, while the axes in 2 are nearly parallel to each other.

In this paper, we present the synthesis, crystal structures and magnetic properties of three complexes with formulae [Cu3Ln2(L)2(teaH)2(N3)2Cl2]·xCH3CN (H2L = N1,N3-bis(3-methoxysalicylidene)diethylenetriamine, teaH3 = triethanolamine; Ln = Ho, x = 3 for 1, Ln = Dy, x = 2 for 2 and Ln = Gd, x = 3 for 3), and the structural topologies of 1–3 are unprecedented. The structural analyses revealed that the metal ions in 1–3 formed a kite-like topology with Ln1, Ln2 and Cu1 located on the body, while Cu2 and Cu3 located on both wings. The dc data of 3 were fitted, which showed that the magnetic couplings are antiferromagnetic between CuII and between GdIII ions, while they are ferromagnetic between CuII and GdIII ions. AC magnetic susceptibility studies for 1 and 2 indicated that both complexes exhibit frequency dependent χ′′ signals at low temperature, but no χ′′ peaks were observed, which may be due to the deviation from ideal geometry for HoIII in 1 and DyIII in 2 and the presence of weak magnetic couplings between paramagnetic ions within the two complexes. For 3, the ac magnetic susceptibilities with zero dc fields show no frequency dependent χ′′ signals because of the isotropy of GdIII. The orientation of the easy magnetization axes of two DyIII in 2 was estimated using the Magellan program, indicating that the magnetic anisotropy axes for Dy1 and Dy2 are almost perpendicular with the angle of 86.630°.

Among energetic materials, there is a significant challenge faced by researchers to seek an optimal balance between high performance and safety. By combination of furoxan and 1,2,4-oxadiazole backbones and C–NO2 moieties, a promising energetic molecule, bis(4-nitro-1,2,5-oxadiazole-2-oxid-3-yl)-azo-1,2,4-oxadiazole (6), was prepared and characterized by IR, multinuclear NMR spectroscopy, elemental analysis, DSC measurements and single crystal X-ray diffraction. It has a high density (1.92 g cm−3), an acceptable thermal stability (182 °C) and a high heat of formation (1188.8 kJ mol−1/2.8 kJ g−1). The calculated detonation performance (D = 9666 m s−1 and P = 42.8 GPa) is comparable to that of CL-20 (9706 m s−1 and 45.2 GPa). More importantly, it shows desirable impact and friction sensitivity (IS: 12 J and FS: 180 N), which is less sensitive than HMX (IS: 7.4 J and FS: 120 N). Furthermore, a detonation test of compound 6 was conducted. The results indicate that compound 6 is more powerful than the commonly used secondary explosive RDX (D = 8795 m s−1 and P = 34.9 GPa). The combination of advanced performances and desirable safety makes this substance a potential secondary explosive.

In this work, we first synthesized a Zn-Dy complex, [Zn6Dy2(L)6(tea)2(CH3OH)2]·6CH3OH·8H2O (H2L = N-3-methoxysalicylidene-2-amino-3-hydroxypyridine, teaH3 = triethanolamine, 1), by employing H2L, anhydrous ZnCl2, and Dy(NO3)3·5H2O reacting with auxiliary ligand teaH3 in the mixture of CH3OH and DMF. When teaH3 and the solvent CH3OH in the reaction system of 1 were replaced by the auxiliary ligand 2,6-pyridinedimethanol (pdmH2) and the solvent MeCN, another Zn-Dy complex, [Zn4Dy4(L)6(pdm)2(pdmH)4]·10CH3CN·5H2O (2), was obtained. For 1, its crystal structure can be viewed as a dimer of two Zn3DyIII units. However, for 2, four DyIII form a zigzag arrangement, and each of its terminals linked two ZnII ions. Interestingly, although the structural topologies of 1 and 2 are different, the coordination geometries of DyIII in 1 and 2 are all triangular dodecahedron (TDD-8). The difference is that the continuous shape measure (CShM) values of DyIII in 1 are larger than the corresponding values in 2. Magnetic investigation revealed that the diluted sample 1@Y exhibits two magnetic relaxation processes, while 2 only exhibits a single relaxation process. Ab initio calculations indicated that, in the crystal lattice of 1, two complexes exhibiting slightly different CShM values of DyIII result in the double relaxation behavior of 1@Y. However, for 2, one of two DyIII fragments possesses a fast quantum tunneling of magnetization (QTM), resulting in its magnetic process presented at T < 1.8 K, so 2 exhibits single relaxation behavior. More importantly, the theoretical calculations also clearly indicated that the weak ligation at equatorial sites of DyIII in 1 and 2 ensure 1@Y and 2 possess SMM behavior, although the coordination geometry of DyIII (TDD-8) in 1 and 2 severely deviates from the ideal polyhedron and its axial symmetry is low.

A novel DyIII-NaI one-dimensional chain, namely [DyIIINaI(L)(CH3CO2)2]n·2CH3CN (1, H2L = N1,N3‑bis(3‑methoxysalicylidene)diethylenetriamine), was synthesized by treating H2L, di-2-pyridyl ketone (dpk), and NaHCO3 with Dy(CH3CO2)2·6H2O in acetonitrile. Complex 1 was characterized by elemental analyses, IR spectroscopy, single-crystal X-ray diffraction analyses and magnetic properties. Structural analyses revealed that 1 consists of a neutral one-dimensional (1D) chain. In each [DyNa] unit, one DyIII and one NaI ions are bridged by two phenoxido O atoms from one L2− ligand and one carboxyl O atom from one CH3CO2−. Moreover, the [DyNa] units were further connected by two carboxyl O atoms from another CH3CO2−. The magnetic studies revealed that 1 exhibits the field-induced single molecule magnet behavior with an effective energy of 13.21 K. The orientation of the anisotropy axes for the DyIII in 1 was estimated by Magellan program, indicating that the directionality of the anisotropic axes is almost collinear to the Dy1-O8 bond, with an angle of 3.085°.

A new and effective method for the preparation of 3-(4-amino-1,2,5-oxadiazol-3-yl)-1,2,4-oxadiazol-5(4H)-one is presented. In order to develop high energy density materials, compounds 3, 4 and 6 were synthesized by the simple nitration, oxidation and oxidation coupling reaction of compound 2. In addition, six energetic salts based on 3 and 4 were synthesized, respectively. Compounds 2–12 were characterized by IR spectroscopy, multinuclear NMR spectroscopy and elemental analysis. The structures of compounds 2, 4 and 7 were determined by single crystal X-ray diffraction. In addition, the energetic properties of compounds 3–12 including density (1.60–1.88 g cm−3), thermal stability (161.83–315.75 °C), except compound 3 which decomposed at 127.25 °C, and sensitivity were also investigated. The energetic performance (P: 22.25–35.81 GPa; D: 7749–8892 m s−1) from the experimental densities and calculated heats of formation suggests that many of them have potential applications as energetic materials.

Inorganic defect halide compounds such as Cs3Bi2I9 have been regarded as promising alternatives to overcome the instability and toxicity issues of conventional perovskite solar cells. However, their wide indirect bandgaps and deep defect states severely limit their photoelectronic conversion efficiency when implemented in devices. Trivalent cation substitution has been proposed by previous calculations allowing the engineering of their band structures, but experimental evidences are still lacking. Herein we use the trivalent cation Ru3+ to partially replace Bi3+ in Cs3Bi2I9, and reveal their structural and optoelectronic properties, as well as the environmental stability. The Ru-doped Cs3Bi2I9 shows a decreasing bandgap with the increasing doping levels and an overall up-shift of band structure, owing to the dopant-induced defect states and thus enhanced phonon–electron coupling. As a result, upon Ru3+ doping, the narrowed bandgap and the upward shift of the band structures might facilitate and broaden their applications in optoelectronic devices.

Using a simple and efficient approach, a series of fused triazolo-triazine compounds, namely, 2,5-dinitramide-7-amino-[1,2,4]triazolo[1,5-a][1,3,5]triazine (2) and its energetic salts (4–9, 11–13), were prepared by nitration of 2,5,7-triamine [1,2,4]triazolo[1,5-a][1,3,5]triazine (1) with 100% nitric acid, followed by reacting with the corresponding bases. All new compounds were comprehensively characterized. Structures of 2 and 4 were further confirmed by single crystal X-ray diffraction. Based on the measured densities and calculated heats of formation (Gaussian 09), detonation pressures and velocities were evaluated by EXPLO5, falling in the range of 21.5–34.2 GPa and 7823–9313 m s−1, respectively. Notably, impact and friction tests show that these compounds are very insensitive (IS > 40 J; FS > 360 N). Moreover, two representative compounds 5 and 6 with high decomposition temperature (5: 194 °C; 6: 199 °C), excellent detonation properties (vD = 9313, 9088 m s−1; P = 33.9, 34.1 GPa) as well as rarely low sensitivities (IS > 40 J; FS > 360 N) are promising candidates as high-energy and insensitive explosives.

Salts containing aniline radical cations have been isolated and characterized by electron paramagnetic resonance (EPR) spectroscopy, UV-Vis absorption spectroscopy and single crystal X-ray diffraction. The EPR spectra and theoretical calculations indicate the unpaired electron is delocalized on phenyl rings and nitrogen atoms. Both radical cations feature a quinoidal geometry with a partially double C–N bond, but are distinct in that the C–N bond is coplanar to the phenyl plane in one cation while deviates from the plane in the other due to steric crowding. The work provides the first unequivocal examples of stable aniline radical cations.

Two tetraazacyclophane dications ( 1 2+ and 2 2+) with different remote substituents have been synthesized, isolated and characterized. Their electronic structures and physical property were studied by various spectroscopic techniques, single crystal X-ray diffraction, super conducting quantum interference device (SQUID) measurements and theoretical calculations. The dications have triplet ground states with ferromagnetic interaction exceeding the thermal energy at room temperature. The solid-state structures of these species were tunable by substituent effect, with 1 2+ as a monomer and 2 2+ as a dimer.

By using weakly coordinating anions we succeeded in the stabilization and isolation of two Wurster’s blue-based diradicaloid dications with saturated spacers. Their geometries and electronic structures were investigated by various experiments in conjunction with DFT calculations. Both one-dimensional alkylate-bridged dications show considerable diradical character with spacer-dependent singlet-triplet energy gaps. One of them displays a much enhanced diradical character and could basically be viewed as a pure diradical with degeneracy of singlet and triplet states.

Defense systems are vital weapons for prokaryotes to resist heterologous DNA and survive from the constant invasion of viruses, and they are widely used in biochemistry investigation and antimicrobial drug research. So far, numerous types of defense systems have been discovered, but there is no comprehensive defense systems database to organize prokaryotic defense gene datasets. To fill this gap, we unveil the prokaryotic antiviral defense system (PADS) Arsenal (https://bigd.big.ac.cn/padsarsenal), a public database dedicated to gathering, storing, analyzing and visualizing prokaryotic defense gene datasets. The initial version of PADS Arsenal integrates 18 distinctive categories of defense system with the annotation of 6 600 264 genes retrieved from 63,701 genomes across 33 390 species of archaea and bacteria. PADS Arsenal provides various ways to retrieve defense systems related genes information and visualize them with multifarious function modes. Moreover, an online analysis pipeline is integrated into PADS Arsenal to facilitate annotation and evolutionary analysis of defense genes. PADS Arsenal can also visualize the dynamic variation information of defense genes from pan-genome analysis. Overall, PADS Arsenal is a state-of-the-art open comprehensive resource to accelerate the research of prokaryotic defense systems.

The false spider mite Brevipalpus yothersi infests a broad host plant range and has become one of the most economically important species within the genus Brevipalpus. This phytophagous mite inflicts damage by both feeding on plants and transmitting plant viruses., The false spider mite Brevipalpus yothersi infests a broad host plant range and has become one of the most economically important species within the genus Brevipalpus. This phytophagous mite inflicts damage by both feeding on plants and transmitting plant viruses. Here, we report the first draft genome sequence of the false spider mite, which is also the first plant virus mite vector to be sequenced. The ∼72 Mb genome (sequenced at 42× coverage) encodes ∼16,000 predicted protein-coding genes.

As an important zoonotic pathogen, Staphylococcus aureus has led to serious mastitis and endometritis in infected dairy cows. In this study, a total of 164 strains of S. aureus were isolated from dairy cows in Xinjiang Province, China, and subjected to assays to determine drug susceptibility and biofilm (BF) formation ability. Enterotoxin-related genes were detected, and the transcription levels of genes related to BF formation were determined by using reverse transcription-quantitative polymerase chain reaction. Moreover, the pathogenicity of isolates with different BF formation abilities was determined by measuring their hemolysis activity, half lethal dose (LD50) and organ bacterial load. The results showed that 86.0% of S. aureus isolates could form BF. Among them, 42.1% of the strains had weak BF formation ability, and most strains with a strong BF formation ability were ica gene carriers. The S. aureus isolates displayed multidrug resistance and their drug resistance was positively correlated with their BF formation ability. Moreover, 96.3% of the S. aureus isolates carried enterotoxin genes. Among them, the detection rates of the novel enterotoxin genes were higher than those of conventional enterotoxin genes. Furthermore, isolates with a strong BF formation ability had higher LD50 but lower hemolysis ability and organ bacterial load than those of the isolates with weak or no BF ability. However, isolates without BF ability produced more severe pathological changes than those of isolates with strong BF formation ability. These findings suggest that higher BF ability and presence of novel enterotoxin genes are important characteristics of S. aureus isolates from dairy cows in Xinjiang Province, China, and such isolates may pose potential threats to food safety.

The false spider mite Brevipalpus yothersi infests a broad host plant range and has become one of the most economically important species within the genus Brevipalpus. This phytophagous mite inflicts damage by both feeding on plants and transmitting plant viruses. Here, we report the first draft genome sequence of the false spider mite, which is also the first plant virus mite vector to be sequenced. The similar to 72 Mb genome (sequenced at 42x coverage) encodes similar to 16,000 predicted protein-coding genes.

As an important zoonotic pathogen, Staphylococcus aureus has led to serious mastitis and endometritis in infected dairy cows. In this study, a total of 164 strains of S. aureus were isolated from dairy cows in Xinjiang Province, China, and subjected to assays to determine drug susceptibility and biofilm (BF) formation ability. Enterotoxin-related genes were detected, and the transcription levels of genes related to BF formation were determined by using reverse transcription-quantitative polymerase chain reaction. Moreover, the pathogenicity of isolates with different BF formation abilities was determined by measuring their hemolysis activity, half lethal dose (LD50) and organ bacterial load. The results showed that 86.0% of S. aureus isolates could form BF. Among them, 42.1% of the strains had weak BF formation ability, and most strains with a strong BF formation ability were ica gene carriers. The S. aureus isolates displayed multidrug resistance and their drug resistance was positively correlated with their BF formation ability. Moreover, 96.3% of the S. aureus isolates carried enterotoxin genes. Among them, the detection rates of the novel enterotoxin genes were higher than those of conventional enterotoxin genes. Furthermore, isolates with a strong BF formation ability had higher LD50 but lower hemolysis ability and organ bacterial load than those of the isolates with weak or no BF ability. However, isolates without BF ability produced more severe pathological changes than those of isolates with strong BF formation ability. These findings suggest that higher BF ability and presence of novel enterotoxin genes are important characteristics of S. aureus isolates from dairy cows in Xinjiang Province, China, and such isolates may pose potential threats to food safety.

One-electron oxidation of the stibines Aryl3Sb (1, Aryl=2,6-iPr2-4-OMe-C6H2; 2, Aryl=2,4,6-iPr3-C6H2) with AgSbF6 and NaBArylF4 (ArylF=3,5-(CF3)2C6H3) afforded the first structurally characterized examples of antimony-centered radical cations 1.+[BArylF4]− and 2.+[BArylF4]−. Their molecular and electronic structures were investigated by single-crystal X-ray diffraction, electron paramagnetic resonance spectroscopy (EPR) and UV/Vis absorption spectroscopy, in conjunction with theoretical calculations. Moreover, their reactivity was investigated. The reaction of 2.+[BArylF4]− and p-benzoquinone afforded a dinuclear antimony dication salt 32+[BArylF4]2−, which was characterized by NMR spectroscopy and X-ray diffraction analysis. The formation of the dication 32+ further confirms that the isolated stibine radical cations are antimony-centered.

Diradicals, molecules with two unpaired electrons, are reactive intermediates that play an important role in many fields., Diradicals, molecules with two unpaired electrons, are reactive intermediates that play an important role in many fields. Their defining feature is the energy difference between their singlet and triplet states, which provides direct information on the extent of their electron exchange interactions. Such knowledge is essential for understanding their diradical character, which is controllable internally by modification of the electronic and steric properties of the substituents. We now report that the energy gap of a diradical in the solid state can also be controlled by an external stimulus. The dication diradical of 4,4′′-di(bisphenylamino)-p-terphenyl exhibits two singlet states with different exchange coupling constants at different temperatures as determined by SQUID and EPR measurements. The behavior is induced by the conformation change of the terphenyl bridge, the key structural unit of the species. The work presents an unprecedented instance of a thermally controllable singlet–triplet gap for a crystalline diradical and provides a novel diradical material relevant to the design of functional materials.

Inorganic defect halide compounds such as Cs

Melatonin (N-acetyl-5-methoxy-tryptamine) is a universal molecule that is present in animals and plants. It has been detected in different kinds of plants and organs in different levels. Melatonin in plants shares the same initial biosynthesis compound with auxin, and therefore functions as indole-3-acetic acid like hormones. Moreover, melatonin is involved in regulating plant growth and development, protecting plants against biotic and abiotic stresses, such as salt, drought, cold, heat and heavy metal stresses. Melatonin improves the stress tolerance of plants via a direct pathway, which scavenges reactive oxygen species directly, and indirect pathways, such as increasing antioxidate enzymes activity, photosynthetic efficiency and metabolites content. In addition, melatonin plays a role in regulating gene expression, and hence affects performance of plants. In this review, the biosynthesis pathway, growth and development regulation, and the environment stress response of melatonin in plants are summarized and future research directions and priorities of melatonin in plants are speculated.

A radical cation of ruthenium was isolated and structurally characterized. The EPR spectrum and theoretical calculations indicate that the spin density mainly resides on ligands. The X-ray structure shows that the change in metal-metal bond lengths is negligible upon one-electron oxidation. sp(3) C-H bond activation was observed during the reaction of the parent molecule with the trityl cation, which possibly occurs via an oxidative EC mechanism: a thermodynamically favorable electron-transfer to give the radical cation intermediate, followed by the hydrogen atom abstraction to afford a cationic tetramethylfulvene complex with formation of a metal-carbon bond.

A highly air-sensitive seventeen-electron half-sandwich radical, [(C6Me6)Cr(CO)3](+), which has been long sought over 40 years, was isolated and structurally characterized. EPR spectroscopy and theoretical calculations indicate that the spin density mainly resides on the chromium atom. The radical can undergo a substitution reaction with PPh3 to form a more stable cation, [(C6Me6)Cr(CO)2(PPh3)](+). This work provides a direct observation of the radical process for CO-substitution reactions found in (arene)M(CO)3 (M = Cr, Mo, or W) systems, and suggests that other stable radicals of the type [(arene)M(CO)3](+) are accessible.

Two new diboranes, 2,6-bis(BMes2 )mesitylene (1) and 3,3'-bis(BMes2 )bimesitylene (3), were synthesized. Two-electron reduction of 1 with elemental potassium afforded the C-H activation product [(18-c-6)K(THF)2 ]2+ ⋅22- bearing a BC3 four-membered ring as colorless crystals, whereas the reduction of 3 with potassium led to the isolation of [(18-c-6)K(THF)2 ]2+ ⋅32-.. as dark blue crystals. Both reduction products were characterized by structural and spectroscopic methods. Electron paramagnetic resonance (EPR) spectroscopy and theoretical calculations revealed that the electron spin density of 32-.. mainly resides on the two boron nuclei and features a triplet ground state, which was confirmed by superconducting quantum interference device (SQUID) measurements as well as theoretical calculations. 32-.. represents the first structurally characterized boron-centered diradical with a triplet ground state. In addition, the reactivity of [(18-c-6)K(THF)2 ]2+ ⋅32-.. toward PhSeSePh and nBu3 SnH was investigated, which is consistent with its radical character.