25 results on '"Z. Ghobadi"'
Search Results
2. Influence of dietary non-phytate phosphorous levels and phytase supplementation on the performance and bone characteristics of broilers
- Author
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A Karimi, MR Bedford, Gh Sadeghi, and Z Ghobadi
- Subjects
Bone ash ,broiler ,phosphorous ,phytate ,phytase ,Animal culture ,SF1-1100 ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
Precise phosphorus nutrition is important for significant reductions in both P pollution and ration costs. The influence of different levels (%) of dietary nPP fed from 0 to 20 d (0.45, 0.40, 0.35, 0.30, 0.25, compared with feeding 0.20 nPP with and without 500 F.T.U. of phytase per kg of diet) and from 21 to 36 d of age (0.414, 0.364, 0.314, 0.264, 0.214, compared with 0.164 nPP with and without 500 F.T.U. of phytase per kg of diet) were evaluate using a total of 588 day-old commercial broiler chicks. Each treatment was replicated four times in a completely randomized design. Body weight (BW), daily gain (DG), feed intake (DFI), feed conversion ratio, plasma P level and bone characteristics were determined, and from these data the P equivalency of the phytase was estimated. Feeding diets containing less than 0.40% of nPP to birds between 0 and 20d resulted in inferior BW, DFI, plasma P level and bone characteristics compared with the control. However, optimum FCR and mortality was supported at lower levels of nPP (0.25%). Between 21 and 36 d, 0.364% was enough to optimise BW, DFI, and femur ash (%); whilst only 0.314% or greater was needed to support optimum DG, toe and tibia ash and only 0.214 to 0.264% was required to optimise shank, femur and tibia lengths; FCR and survivability. A broken line analysis also showed that the nPP (%) requirement ranged from 0.267 to 0.410 and 0.272 to 0.380% during 0 to 20 and 21 to 36 d, respectively. Phytase supplementation improved performance and bone criterion and its P equivalency, depending upon the response of interest and birds age, ranged from 0.00 to 0.110%. In conclusion, the results showed that the combination of a lower level of nPP and phytase may be used to increase dietary P utilization, without severe changes in performance and bone quality.
- Published
- 2011
- Full Text
- View/download PDF
3. Biodegradation of synthetic dye using partially purified and characterized laccase and its proposed mechanism
- Author
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Soheila Yaghmaei, Z. Ghobadi Nejad, and Seyed Mehdi Borghei
- Subjects
Environmental Engineering ,biology ,Substrate (chemistry) ,Enzyme assay ,Eriochrome Black T ,chemistry.chemical_compound ,chemistry ,Safranin ,Methyl red ,Rhodamine B ,biology.protein ,Environmental Chemistry ,Crystal violet ,Malachite green ,General Agricultural and Biological Sciences ,Nuclear chemistry - Abstract
The supernatant obtained from the extracellular laccase produced by Phanerochaete chrysosporium was used as the enzyme source to conduct a partial purification, characterization and dye decolorization study. The partially purified enzyme was stable in the pH range of 3–5 and showed an optimum activity at pH 4.0, using guaiacol as a substrate. Laccase stability of pH was determined and discovered to retain 100% of its activity at a pH of 4.0 after 2 h. The maximum enzyme activity was obtained between 30 and 50 °C. The maximum velocity and Michaelis constant were calculated as 3.171 µM−1·min and 1628.23 µM, respectively. The enzyme was activated by Fe2+, Zn2+, Ca2+ and Cu2+, while Hg2+, Mn2+, Co2+, Mg2+, Cd2+, Ni2+ reduced the laccase activity. The partially purified enzyme was strongly inhibited by 1 mM of NaN3 and sodium thioglycolate. Among the eight different dyes (Malachite green, Safranin, Crystal violet, Methylene blue, Eriochrome black T, Methyl red, Methyl orange, Rhodamine B and Nigrosin), the enzyme showed highly efficient decolorizing activity (99%) toward Malachite green after treatment for 24 h at 30 °C. Antibacterial results showed that the product obtained by treating the dye with the enzyme is completely non-toxic to Staphylococcus aureus, Pseudomonas aeruginosa and Escherichia coli. High-performance liquid chromatography and mass spectroscopy analysis of the extracted product confirmed the complete biodegradation of Malachite green and Leucomalachite green. Di-benzyl methane and 4-(dimethylamino) benzaldehyde were the ultimate products identified in this research.
- Published
- 2019
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- View/download PDF
4. Immobilization of Laccase from Trametes hirsuta onto CMC Coated Magnetic Nanoparticles
- Author
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S. Hejazi, Soheila Yaghmaei, Z. Ghobadi Nejad, Sadegh Sadeghzadeh, and Saba Ghazvini
- Subjects
Laccase ,Immobilized enzyme ,biology ,technology, industry, and agriculture ,General Engineering ,Nanoparticle ,Trametes hirsuta ,biology.organism_classification ,Carboxymethyl cellulose ,chemistry.chemical_compound ,chemistry ,Dynamic light scattering ,medicine ,Magnetic nanoparticles ,Carbodiimide ,Nuclear chemistry ,medicine.drug - Abstract
In this study, Fe3O4/CMC magnetic nanoparticles were synthesized through co-precipitation method. Afterward, laccase from Trametes hirsuta was immobilized onto Carboxymethyl cellulose (CMC)-coated magnetic Fe3O4 nanoparticles by covalent bonding between carboxyl groups of carboxymethyl cellulose and amine group of laccases. Also, the resulted magnetic nanoparticles and immobilized laccase were characterized by Fourier-transform infrared spectroscopy (FTIR), scanning electron microscope (SEM) and dynamic light scattering (DLS) analysis. Moreover, the vital factors in enzyme immobilization, such as contact time, amount of N-hydroxysuccinimide (NHS), and the amount of nanoparticles were optimized, which successively 48 h, 0.01 g, and 0.0125 g were achieved for 0.01g of N-ethyl-N′-(3-dimethylaminopropyl)carbodiimide (EDC). Activity recovery of 51 ± 0.8% was achieved by optimizing the immobilization process. The results also indicated that the loading of laccase onto carboxymethyl cellulose-coated Fe3O4 nanoparticles was approximately 120 (mg/g). Finally, the immobilized laccases on magnetic support could save nearly 50% of their initial activity after five consecutive cycles.
- Published
- 2020
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5. Kinetic studies of Bisphenol A in aqueous solutions by enzymatic treatment
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Seyed Mehdi Borghei, Soheila Yaghmaei, and Z. Ghobadi Nejad
- Subjects
Laccase ,endocrine system ,Bisphenol A ,Environmental Engineering ,Aqueous solution ,Chromatography ,biology ,urogenital system ,Chemistry ,Kinetics ,010501 environmental sciences ,biology.organism_classification ,01 natural sciences ,Michaelis–Menten kinetics ,Enzyme assay ,chemistry.chemical_compound ,biology.protein ,Environmental Chemistry ,Phanerochaete ,Response surface methodology ,General Agricultural and Biological Sciences ,hormones, hormone substitutes, and hormone antagonists ,0105 earth and related environmental sciences - Abstract
Bisphenol A (BPA), which is a major component in the production of various consumer products, is one of the most significant endocrine-disrupting chemicals. In this research, the biocatalytic elimination of Bisphenol A using laccase produced by Phanerochaete chrysosporium was examined and optimized. The response surface methodology was used to study the effect of independent variables such as pH, temperature, initial laccase activity, initial Bisphenol A concentration, and the interactive effects of each variable on the removal of Bisphenol A and residual enzyme activity. Based on response surface plots, the maximum Bisphenol A removal (93%) was detected at a pH value of 8, temperature 40 °C, initial laccase concentration 3 U/ml, and initial Bisphenol A concentration 2 mM after 3 h of treatment. The results showed that pH and temperature are the primary determining factors in Bisphenol A elimination. Maximum reaction rate and Michaelis constant were calculated from the Lineweaver–Burk plots and are 20.12 µM−1 min and 820 µM, respectively. The linearity of the data on the Lineweaver–Burk plot and the excellent correlation coefficient imply that laccase has a propensity to pursue Michaelis–Menten kinetics. In the present study, a high Bisphenol A degradation velocity with a low Km value was attained using the enzyme produced by P. chrysosporium. The degradation of Bisphenol A by the crude extract of laccase using the P. chrysosporium strain would provide a cost effective solution and seems to be an attractive option for the removal of micropollutants, including the recognized and suspected endocrine disruptors.
- Published
- 2018
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6. Enhancing biosurfactant production from an indigenous strain of Bacillus mycoides by optimizing the growth conditions using a response surface methodology
- Author
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Mohammad Reza Rahimpour, Abdolhossein Jahanmiri, Z. Ghobadi, D. Arabian, R. Roostaazad, and Ali Najafi
- Subjects
Chromatography ,biology ,Strain (chemistry) ,Central composite design ,Chemistry ,General Chemical Engineering ,General Chemistry ,Bacillus mycoides ,biology.organism_classification ,Industrial and Manufacturing Engineering ,Thin-layer chromatography ,Salinity ,Surface tension ,Environmental Chemistry ,Response surface methodology ,Bacteria - Abstract
In this study, we have investigated the potential of a native bacterial strain isolated from an Iranian oil field for the production of biosurfactant. The bacterium was identified to be Bacillus mycoides by biochemical tests and 16S ribotyping. The biosurfactant, which was produced by this bacterium, was able to reduce the surface tension of media to 34 mN/m. Compositional analysis of the produced biosurfactant has been carried out by thin layer chromatography (TLC) and FT-IR. The biosurfactant produced by the isolate was characterized as lipopeptide derivative. Biosurfactant production was optimized by the combination of central composite design (CCD) and response surface methodology (RSM). The factor selected for optimization of growth conditions were pH, temperature, glucose and salinity concentrations. The empirical model developed through RSM in terms of effective operational factors mentioned above was found to be adequate to describe the biosurfactant production. Through the analysis, glucose and temperature were found to be the most significant factors, whereas pH and salinity had less effect within the ranges investigated. A maximum reduction in surface tension was obtained under the optimal conditions of 16.55 g/l glucose concentration, 39.03 °C, 55.05 g/l total salt concentration and medium pH 7.37.
- Published
- 2010
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7. Optimization of ferrous biooxidation rate in a packed bed bioreactor using Taguchi approach
- Author
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Manouchehr Vossoughi, Soheila Yaghmaei, Arezou Jafari, Z. Ghobadi, and Seyyed Mohammad Mousavi
- Subjects
Packed bed ,Waste management ,Chemistry ,Process Chemistry and Technology ,General Chemical Engineering ,Energy Engineering and Power Technology ,General Chemistry ,Pulp and paper industry ,Industrial and Manufacturing Engineering ,Dilution ,Ferrous ,Flue-gas desulfurization ,Reaction rate ,Taguchi methods ,Bioreactor ,Aeration - Abstract
The biological oxidation of ferrous ion by iron-oxidizing bacteria is potentially a useful industrial process for removal of H2S from industrial gases, desulphurization of coal, removal of sulfur dioxide from flue gas, treatment of acid mine drainage and regeneration of an oxidant agent in hydrometallurgical leaching operations. The main purpose of this study was to find optimum values of the process parameters on the ferrous biooxidation rate by immobilization of a native Sulfobacillus species on the surface of low density polyethylene (LDPE) particles in a packed-bed bioreactor using Taguchi method. Five control factors, including temperature, initial pH of feed solution, dilution rate, initial concentration of Fe3+ and aeration rate in four levels are considered in Taguchi technique. L16 orthogonal array has been used to determine the signal to noise (S/N) ratio. Analysis of variance (ANOVA) was used to determine the optimum conditions and most significant process parameters affecting the reaction rate. Analysis of the experiments using Taguchi method indicated that pH of feed solution has the most contribution in the biooxidation rate of ferrous ion. The biological reaction rate was obtained 8.4 g L−1 h−1 by setting the control factors according to the Taguchi approach. Finally, based on the primary results, a verification test was also performed to check the optimum condition.
- Published
- 2007
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8. Determination of Effective Variables on Arachidonic Acid Production by Mortierella alpina CBS 754.68in Solid-State Fermentation using Plackett-Burman Screening Design
- Author
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Z. Ghobadi, Z. Hamidi- Esfahani, and M. H. Azizi
- Subjects
Solid-statefermentation ,Arachidonic acid ,Mortierella alpine ,Plackett-Burman design - Abstract
In the present study, the oleaginous fungus Mortierella alpina CBS 754.68 was screened for arachidonic acidproduction using inexpensive agricultural by-products as substrate. Four oilcakes were analysed to choose the best substrate among them. Sunflower oilcake was the most effective substrate for ARA production followed by soybean, colza and olive oilcakes. In the next step, seven variables including substrate particle size, moisture content, time, temperature, yeast extract supply, glucose supply and glutamate supply were surveyed and effective variables for ARA production were determined using a Plackett-Burman screening design. Analysis results showed that time (12 days), substrate particle size (1-1.4 mm) and temperature (20ºC) were the most effective variables for the highest level of ARA production respectively., {"references":["H. D. Jang, S. S. Yang. Polyunsaturated fatty acids production with a\nsolid-state column reactor. Bioresource Technol. 2008, 99: 6181-6189.","M. H. Cheng, T. H. Walker, G. J. Hulbert and D. R. Raman. Fungal\nproduction of eicosapentaenoic acid and arachidonic acids from\nindustrial waste streams and crude soybean oil. Bioresource Technol.\n1999, 67: 101-110.","S. Papanilolaou, M. Komaitis and G. Aggelis. Single cell oil (SCO)\nproduction by Mortierella isabellina grown on high-sugar content media.\nBioresource Technol. 2004, 95: 287-291","T. Aki, Y. Nagahata, K. Ishihara, Y. Tanaka, T. Morinaha, K.\nHigashiyama, K. Akimoto, S. Fujikawa, S. Kawamoto, S. Shigeta, K.\nono and O. Suzuki. Production of arachidonic acid by filamentous\nfangus, Mortierella alliacea strain YN-15. J Amer Oil Chem Soc. 2001,\n78(6): 599-604","H. D. Jang, Y. Y. Lin and S. S. Yang. Polyunsaturated fatty acid\nproduction with Mortierella alpina by solid substrate fermentation. Bot\nBull Acad Sin. 2000, 41: 41-48.","M. Certik, L. Slavikova and J. Sajbidor. Enhancement of nutritional\nvalue of cereals with ╬│-linolenic acid by fungal solid state fermentation.\nFood Technol Biotechnol. 2006, 44(1): 75-82","E. Conti, M. Stredansky, S. Stredanska and F. Zanetti. ╬│-Linolenic acid\nproduction by solid-state fermentation of Mucorales strains on cereals.\nBioresourse Technol. 2001, 76: 283-286.","H. Gema, A. Cavadia, D. Dimou, V. Tsagou, M. Komaitis and G.\nAggelis. Production of ╬│-linolenic acid by Cunninghamella echinulata\ncultivated on glucose and orange peel. Appl Microbiol Biotechnol. 2002,\n58: 303-307","P. Jangbua, K. Laoteng, P. Kitsubun, M. Nopharatana and A. Tongata.\nGamma-linolenic acid production of Mucor rouxii by solid-state\nfermentation using agricultural by-products. Lett Appl Microbiol. 2009,\n49(1): 91-97\n[10] M. Veen, C. lang. Production of lipid compounds in the yeast\nSaccharomyces servisiae. Appl Microbiol Biotechnol. 2004, 63: 635-646\n[11] M. Zhu, L.-J. Yu and Y.-X. Wu. An inexpensive medium for production\nof arachidonic acid by Mortierella alpina. J Ind Microbiol Biotechnol.\n2003, 30: 75-79.\n[12] P. B. L. Fregolente, L. V. Fregolente, M. R. W. Maciel and P. O.\nCarvalho. Screening of microbial lipases and evalutaion of their\npotential to produce glycerides with high gamma linolenic acid\nconcentration. Braz J Microbiol. 2009, 40(4): 747-756\n[13] M. Stradansky, E. Conti and A. Salaris. Production of polyunsaturated\nfatty acids by Pythium ultimum in solid-stste cultivation. Enzyme\nMicrob Technol. 2000, 26: 304-307\n[14] L. C. Metcalf, A. A. Schmitz, and J. R. Pelka. Rapid preparation of\nmethyl esters from lipid for gas chromatography analysis. Anal Chem.\n1996, 38: 514-518.\n[15] S. Stredanska, D. Slugen, M. Stredansky and J. Grego. Arachidonic acid\nproduction by Mortierella alpina grown on solid substrates. World J\nMicrobiol Biotechnol. 1993, 9: 511-513."]}
- Published
- 2011
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9. Influence of dietary non-phytate phosphorous levels and phytase supplementation on the performance and bone characteristics of broilers
- Author
-
A. Karimi, Z Ghobadi, G.H. Sadeghi, and Bedford
- Subjects
chemistry.chemical_element ,Biology ,broiler ,Feed conversion ratio ,chemistry.chemical_compound ,Animal science ,phytate ,lcsh:Zoology ,Femur ,lcsh:QL1-991 ,Completely randomized design ,lcsh:SF1-1100 ,lcsh:Veterinary medicine ,Phosphorus ,Bone ash ,Broiler ,Improved performance ,Biochemistry ,chemistry ,phytase ,lcsh:SF600-1100 ,Animal Science and Zoology ,Phytase ,lcsh:Animal culture ,phosphorous - Abstract
Precise phosphorus nutrition is important for significant reductions in both P pollution and ration costs. The influence of different levels (%) of dietary nPP fed from 0 to 20 d (0.45, 0.40, 0.35, 0.30, 0.25, compared with feeding 0.20 nPP with and without 500 F.T.U. of phytase per kg of diet) and from 21 to 36 d of age (0.414, 0.364, 0.314, 0.264, 0.214, compared with 0.164 nPP with and without 500 F.T.U. of phytase per kg of diet) were evaluate using a total of 588 day-old commercial broiler chicks. Each treatment was replicated four times in a completely randomized design. Body weight (BW), daily gain (DG), feed intake (DFI), feed conversion ratio, plasma P level and bone characteristics were determined, and from these data the P equivalency of the phytase was estimated. Feeding diets containing less than 0.40% of nPP to birds between 0 and 20d resulted in inferior BW, DFI, plasma P level and bone characteristics compared with the control. However, optimum FCR and mortality was supported at lower levels of nPP (0.25%). Between 21 and 36 d, 0.364% was enough to optimise BW, DFI, and femur ash (%); whilst only 0.314% or greater was needed to support optimum DG, toe and tibia ash and only 0.214 to 0.264% was required to optimise shank, femur and tibia lengths; FCR and survivability. A broken line analysis also showed that the nPP (%) requirement ranged from 0.267 to 0.410 and 0.272 to 0.380% during 0 to 20 and 21 to 36 d, respectively. Phytase supplementation improved performance and bone criterion and its P equivalency, depending upon the response of interest and birds age, ranged from 0.00 to 0.110%. In conclusion, the results showed that the combination of a lower level of nPP and phytase may be used to increase dietary P utilization, without severe changes in performance and bone quality.
- Published
- 2011
10. Acoustically presented semantic decision-making tasks provide a robust depiction of the temporo-parietal speech areas
- Author
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Stephan Ulmer, Ulf R. Jensen-Kondering, Z. Ghobadi, Stephan Wolff, and Olav Jansen
- Subjects
Adult ,Male ,Word generation ,Speech recognition ,Rest ,Decision Making ,Stimulus (physiology) ,Functional Laterality ,Block design ,Verb generation ,Young Adult ,Physiology (medical) ,Noun ,Parietal Lobe ,Healthy volunteers ,Image Processing, Computer-Assisted ,Humans ,Speech ,Communication ,Brain Mapping ,business.industry ,General Medicine ,Magnetic Resonance Imaging ,Electric Stimulation ,Temporal Lobe ,Frontal Lobe ,Semantics ,Neurology ,Reading ,Data Interpretation, Statistical ,Depiction ,Surgery ,Female ,Neurology (clinical) ,Psychology ,business ,Algorithms ,Photic Stimulation - Abstract
Functional MRI (fMRI) is routinely used to depict language areas, for example in the preoperative diagnostic work-up of patients with a brain tumour. The objective of this study was to test whether semantic decision making can activate the temporo-parietal language areas better than phonological generation stimuli. Five fMRI language stimuli were tested in 20 healthy volunteers: (i) word generation to a given letter (WG); (ii) verb generation to a given noun (VG); (iii) generation of groups of words (GW); (iv) detection of a semantic violation in sentences (SV); and (v) detection of pseudowords (PW). The stimuli were presented both visually and acoustically. We used a block design and evaluated the data with SPM5 with predefined regions of interest in the frontal and temporo-parietal language areas. A lateralisation index (LI) was also calculated. We found that WG and VG achieved the best results in frontal language areas; VG, SV and PW presented acoustically achieved the best results in the temporo-parietal language areas; and that LI was most reliably calculated in the frontal language areas. An acoustically presented semantic decision making stimulus should be implemented in the preoperative diagnostic work-up to robustly depict the temporo-parietal language areas. The stimulus is easy to understand and perform, and it achieves robust results.
- Published
- 2011
11. Chitosan Extraction by Fungi in Solid State Fermentation
- Author
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S. Mohammad, V. Maghsoudi, S. Yaghmaie, and Z. Ghobadinejad
- Subjects
Polymers and polymer manufacture ,TP1080-1185 - Published
- 2006
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12. Rosuvastatin attenuates total-tau serum levels and increases expression of miR-124-3p in dyslipidemic Alzheimer's patients: a historic cohort study.
- Author
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Usefi F, Rustamzadeh A, Ghobadi Z, Sadigh N, Mohebi N, Ariaei A, and Moradi F
- Subjects
- Aged, Female, Humans, Male, Middle Aged, Biomarkers blood, Cohort Studies, Hydroxymethylglutaryl-CoA Reductase Inhibitors pharmacology, Hydroxymethylglutaryl-CoA Reductase Inhibitors therapeutic use, Alzheimer Disease drug therapy, Alzheimer Disease blood, Dyslipidemias drug therapy, Dyslipidemias blood, MicroRNAs blood, Rosuvastatin Calcium pharmacology, Rosuvastatin Calcium therapeutic use, tau Proteins blood
- Abstract
microRNAs are candidate diagnostic biomarkers for Alzheimer's disease. This study aimed to compare Silymarin with Rosuvastatin and placebo on total-Tau protein level and expression levels of microRNAs and TGF-β and COX-2 in Alzheimer's patients with secondary dyslipidemia. 36 mild AD patients with dyslipidemia were divided into three groups of 12. The first group received silymarin (140mg), the second group received placebo (140mg), and the third group recieved Rosuvastatin (10mg). Tablets were administered three times a day for Six months. The blood samples of the patients were collected before and after the intervention and the serum was separated. Using the RT-qPCR method, the expression levels of miR-124-3p and miR-125b-5p were assessed, and the serum levels of total-Tau, TGF-β, and COX-2 enzyme were measured using the ELISA method. Data were analyzed with SPSS software. In this study, the level of Δtotal-Tau was significantly lower in the Rosuvastatin group compared to the placebo (P = 0.038). Also, a significant reduction in the level of ΔTGF-β was observed in the Silymarin to Rosuvastatin group (p = 0.046) and ΔmiR-124-3p was significantly increased in the Rosuvastatin compared to the placebo group (p = 0.044). Rosuvastatin outperformed silymarin in decreasing Δtotal-Tau serum levels and enhancing expression of ΔmiR-124-3p, attributed to Rosuvastatin's capacity to lower cholesterol levels and inflammation concurrently. Conversely, silymarin was more effective than Rosuvastatin in reducing levels of ΔTGF-β. Serum miR-124-3p could serve as a promising diagnostic biomarker and a new therapeutic focus in AD., (© 2024. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2024
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13. Effects silymarin and rosuvastatin on amyloid-carriers level in dyslipidemic Alzheimer's patients: A double-blind placebo-controlled randomized clinical trial.
- Author
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Rustamzadeh A, Sadigh N, Vahabi Z, Khamseh F, Mohebi N, Ghobadi Z, and Moradi F
- Abstract
Purpose: The production/excretion rate of Amyloid-β (Aβ) is the basis of the plaque burden in alzheimer's disease (AD), which depends on both central and peripheral clearance. In this study, the effect of silymarin and rosuvastatin on serum markers and clinical outcomes in dyslipidemic AD patients was investigated., Methods: Participants (n=36) were randomized to silymarin (140 mg), placebo, and rosuvastatin 10 mg orally three times a day for 6 months. Serum collection and clinical outcome tests were performed at baseline and after completion of treatment. Lipid profile markers, oxidative stress markers, Aβ
1-42 /Aβ1-40 ratio, and Soluble Low-density lipoprotein receptor-Related Protein-1 (sLRP1)/Soluble Receptor for Advanced Glycation End Products (sRAGE) ratio were measured., Results: There was a statistically significant increase in Δ-high density lipoprotein (ΔHDL) between silymarin and placebo (P<0.000) and also between rosuvastatin and placebo (p=0.044). The level of Δ-triglycerides (ΔTG) in the silymarin group has a significant decrease compared to both the placebo and the rosuvastatin group (p<0.000 and p=0.036, respectively). The Δ-superoxide dismutase (ΔSOD) level in the silymarin group compared to placebo and rosuvastatin had a significant increase (p<0.000 and p=0.008, respectively). The ΔAβ1-42 /Aβ1-40 in the silymarin group compared to both the placebo and rosuvastatin groups had a significant increase (p<0.05). There was an inverse relationship between ΔTG and ΔAβ1-42 /Aβ1-40 (p=-0.493 and p=0.004). ΔAβ1-42 /Aβ1-40 has a direct statistical relationship with ΔSOD marker (p=0.388 and p=0.031). Also, there was a direct correlation between the level of ΔAβ1-42 /Aβ1-40 and ΔsLRP1/sRAGE (p=0.491 and p=0.005)., Conclusion: Our study showed the relationship between plasma lipids, especially ΔTG and ΔHDL, with ΔAβ1-42 /Aβ1-40 in dyslipidemic AD patients, and modulation of these lipid factors can be used to monitor the response to treatments., Competing Interests: The Authors declare no competing financial or non-financial interests directly or indirectly related to the work submitted for publication., (© 2024 The Authors.)- Published
- 2024
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14. Which neuroimaging and fluid biomarkers method is better in theranostic of Alzheimer's disease? An umbrella review.
- Author
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Mohammadi H, Ariaei A, Ghobadi Z, Gorgich EAC, and Rustamzadeh A
- Abstract
Biomarkers are measured to evaluate physiological and pathological processes as well as responses to a therapeutic intervention. Biomarkers can be classified as diagnostic, prognostic, predictor, clinical, and therapeutic. In Alzheimer's disease (AD), multiple biomarkers have been reported so far. Nevertheless, finding a specific biomarker in AD remains a major challenge. Three databases, including PubMed, Web of Science, and Scopus were selected with the keywords of Alzheimer's disease, neuroimaging, biomarker, and blood. The results were finalized with 49 potential CSF/blood and 35 neuroimaging biomarkers. To distinguish normal from AD patients, amyloid-beta
42 (Aβ42 ), plasma glial fibrillary acidic protein (GFAP), and neurofilament light (NFL) as potential biomarkers in cerebrospinal fluid (CSF) as well as the serum could be detected. Nevertheless, most of the biomarkers fairly change in the CSF during AD, listed as kallikrein 6, virus-like particles (VLP-1), galectin-3 (Gal-3), and synaptotagmin-1 (Syt-1). From the neuroimaging aspect, atrophy is an accepted biomarker for the neuropathologic progression of AD. In addition, Magnetic resonance spectroscopy (MRS), diffusion weighted imaging (DWI), diffusion tensor imaging (DTI), tractography (DTT), positron emission tomography (PET), and functional magnetic resonance imaging (fMRI), can be used to detect AD. Using neuroimaging and CSF/blood biomarkers, in combination with artificial intelligence, it is possible to obtain information on prognosis and follow-up on the different stages of AD. Hence physicians could select the suitable therapy to attenuate disease symptoms and follow up on the efficiency of the prescribed drug., (© 2024 The Authors.)- Published
- 2024
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15. Synthesis, design, biological evaluation, and computational analysis of some novel uracil-azole derivatives as cytotoxic agents.
- Author
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Emami L, Zare F, Khabnadideh S, Rezaei Z, Sabahi Z, Zare Gheshlaghi S, Behrouz M, Emami M, Ghobadi Z, Madadelahi Ardekani S, Barzegar F, Ebrahimi A, and Sabet R
- Abstract
The design and synthesis of novel cytotoxic agents is still an interesting topic for medicinal chemistry researchers due to the unwanted side effects of anticancer drugs. In this study, a novel series of uracil-azole hybrids were designed and synthesized. The cytotoxic activity, along with computational studies: molecular docking, molecular dynamic simulation, density functional theory, and ADME properties were also, evaluated. The compounds were synthesized by using 3-methyl-6-chlorouracil as the starting material. Cytotoxicity was determined using MTT assay in the breast carcinoma cell line (MCF-7) and Hepatocellular carcinoma cell line (HEPG-2). These derivatives demonstrated powerful inhibitory activity against breast and hepatocellular carcinoma cell lines in comparison to Cisplatin as positive control. Among these compounds, 4j displayed the best selectivity profile and good activity with IC
50 values of 16.18 ± 1.02 and 7.56 ± 5.28 µM against MCF-7 and HEPG-2 cell lines respectively. Structure-activity relationships revealed that the variation in the cytotoxic potency of the synthesized compounds was affected by various substitutions of benzyl moiety. The docking output showed that 4j bind well in the active site of EGFR and formed a stable complex with the EGFR protein. DFT was used to investigate the reactivity descriptors of 4a and 4j. The outputs demonstrated that these uracil-azole hybrids can be considered as potential cytotoxic agents., (© 2023. The Author(s).)- Published
- 2024
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16. Biological treatment of triclosan using a novel strain of Enterobacter cloacae and introducing naphthalene dioxygenase as an effective enzyme.
- Author
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Ghafouri M, Pourjafar F, Ghobadi Nejad Z, and Yaghmaei S
- Subjects
- Enterobacter cloacae metabolism, Multienzyme Complexes, Triclosan analysis, Dioxygenases, Water Pollutants, Chemical chemistry
- Abstract
In recent years, triclosan (TCS) has been widely used as an antibacterial agent in personal care products due to the spread of the Coronavirus. TSC is an emerging contaminant, and due to its stability and toxicity, it cannot be completely degraded through traditional wastewater treatment methods. In this study, a novel strain of Enterobacter cloacae was isolated and identified that can grow in high TCS concentrations. Also, we introduced naphthalene dioxygenase as an effective enzyme in TCS biodegradation, and its role during the removal process was investigated along with the laccase enzyme. The change of cell surface hydrophobicity during TCS removal revealed that a glycolipid biosurfactant called rhamnolipid was involved in TCS removal, leading to enhanced biodegradation of TCS. The independent variables, such as initial TCS concentration, pH, removal duration, and temperature, were optimized using the response surface method (RSM). As a result, the maximum TCS removal (97%) was detected at a pH value of 7 and a temperature of 32 °C after 9 days and 12 h of treatment. Gas chromatography-mass spectrometry (GC/MS) analysis showed five intermediate products and a newly proposed pathway for TCS degradation. Finally, the phytotoxicity experiment conducted on Cucumis sativus and Lens culinaris seeds demonstrated an increase in germination power and growth of stems and roots in comparison to untreated water. These results indicate that the final treated water was less toxic., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2023
- Full Text
- View/download PDF
17. In-silico design of peptides for inhibition of HLA-A*03-KLIETYFSK complex as a new drug design for treatment of multiples sclerosis disease.
- Author
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Ghobadi Z, Mahnam K, and Shakhsi-Niaei M
- Subjects
- Drug Design, Humans, Peptides, Sclerosis, HLA-A Antigens, Multiple Sclerosis drug therapy
- Abstract
Multiple sclerosis is recognized as a chronic inflammatory disease. Human leukocyte antigen (HLA) plays an important role in initiating adaptive immune responses. HLA class I is present in almost all nucleated cells and presents the cleaved endogenous peptide antigens to cytotoxic T cells. HLA-A*03 is one of the HLA class I alleles, which is reported as substantially related HLA to MS disease. In 2011, the structure of the HLA-A*03 in complex was identified with an immunodominant proteolipid protein (PLP) epitope (KLIETYFSK). This complex has been reported as an important autoantigen-presenting complex in MS pathogenesis. In this study, new peptides were designed to bind to this complex that may prevent specific pathogenic cytotoxic T cell binding to this autoantigen-presenting complex and CNS demyelination. Herein, 14 new helical peptides containing 19 amino acids were designed and their structures were predicted using the PEP-FOLD server. The binding of each designed peptide to the mentioned complex was then performed. A mutation approach was used by the BeAtMuSiC server to improve the binding affinity of the designed peptide. In each position, amino acid substitutions leading to an increase in the binding affinity of the peptide to the mentioned complex were determined. Finally, the resulting complexes were simulated for 40 ns using AMBER18 software. The results revealed that out of 14 designed peptides, "WRYWWKDWAKQFRQFYRWF" peptide exhibited the highest affinity for binding to the mentioned complex. This peptide can be considered as a potential drug to control multiple sclerosis disease in patients carrying the HLA-A*03 allele., (Copyright © 2021 Elsevier Inc. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
18. Finding a prospective dual-target drug for the treatment of coronavirus disease by theoretical study.
- Author
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Mahnam K and Ghobadi Z
- Subjects
- Humans, Prospective Studies, Protein Binding, Molecular Dynamics Simulation, Molecular Docking Simulation, SARS-CoV-2 metabolism, Spike Glycoprotein, Coronavirus chemistry
- Abstract
Spike protein of coronavirus is a key protein in binding and entrance of virus to the human cell via binding to the receptor-binding domain (RBD) domain of S1 subunit to peptidase domain region of ACE2 receptor. In this study, the possible effect of 24 antiviral drugs on the RBD domain of spike protein was investigated via docking and molecular dynamics simulation for finding a dual-target drug. At first, all drugs were docked to the RBD domain of spike protein, and then all complexes and free RBD domains were separately used for molecular dynamics simulation for 50 ns via amber18 software. The simulation results showed that 10 ligands from 28 ligands were separated from the RBD domain, and among 18 remained ligands, baloxavir marboxil, and danoprevir drugs, besides endonuclease activity and protease inhibitory, can bind to key residues of the RBD domain. Then these drugs have a dual target and should be more effective than current drugs, and experimental studies should be done on baloxavir marboxil and danoprevir as more potential drugs for coronavirus disease Communicated by Ramaswamy H. Sarma.
- Published
- 2022
- Full Text
- View/download PDF
19. Statistical optimization of arachidonic acid synthesis by Mortierella alpina CBS 754.68 in a solid-state fermenter.
- Author
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Ghobadi Z, Hamidi-Esfahani Z, and Azizi MH
- Abstract
Arachidonic acid (ARA) is an omega-6 fatty acid that plays a major role in human health. The present study optimizes the production of ARA by the soil fungus Mortierella alpina CBS 754.68 on oil cakes. In the first step, the best substrate was chosen from four oil cakes, namely soybean, sunflower, olive, and colza oil cakes, of which sunflower oil cake showed the highest yield. In the next step, screening tests were performed using the Plackett-Burman design. Seven variables (substrate particle size, moisture content, time, temperature, yeast extract, glucose, and glutamate) were investigated (each taking values of +1 and -1). Among these variables, time, temperature, and substrate particle size significantly affected ARA production ( p < .05), so they were further investigated in the optimization step. The optimal fermentation time, temperature, and substrate particle size calculated by response surface methodology were 8.75 days, 18.5°C, and 1.3 mm-1.7 mm, respectively. Under these conditions, M. alpina was predicted to produce 4.19 mg of ARA/g dry weight of substrate (DWS). The actual yield, determined in evaluation tests, was 4.48 ± 0.16 mg ARA/g DWS, which shows the accuracy of the model. In the final step, the effect of the aeration rate on producing ARA was investigated in a packed-bed solid-state fermenter under the determined optimal conditions. In this stage, the highest ARA yield was 10.13 ± 0.26 mg/g DWS, approximately double that of the optimization step, and this confirms that aeration increases ARA production by M. alpina ., Competing Interests: The authors declare no conflicts of interest., (© 2021 The Authors. Food Science & Nutrition published by Wiley Periodicals LLC.)
- Published
- 2021
- Full Text
- View/download PDF
20. Pharmaceuticals removal by immobilized laccase on polyvinylidene fluoride nanocomposite with multi-walled carbon nanotubes.
- Author
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Masjoudi M, Golgoli M, Ghobadi Nejad Z, Sadeghzadeh S, and Borghei SM
- Subjects
- Enzymes, Immobilized, Hydrogen-Ion Concentration, Laccase, Polyporaceae, Polyvinyls, Trametes, Nanocomposites, Nanotubes, Carbon, Pharmaceutical Preparations
- Abstract
The presence of pharmaceutical micropollutants in water and wastewater is considered a serious environmental issue. To eliminate these pollutants, biodegradation of pharmaceuticals using enzymes such as laccase, is proposed as a green method. In this study, immobilized laccase was used for the removal of two model pharmaceutical compounds, carbamazepine and diclofenac. Polyvinylidene fluoride (PVDF) membrane modified with multi-walled carbon nanotubes (MWCNTs) were synthesized as a tailor-made support for enzyme immobilization. Covalently immobilized laccase from Trametes hirsuta exhibited remarkable activity and activity recovery of 4.47 U/cm
2 and 38.31%, respectively. The results also indicated improvement in the operational and thermal stability of the immobilized laccase compared to free laccase. Finally, by using immobilized laccase in a mini-membrane reactor, removal efficiencies of 27% in 48 h and 95% in 4 h were obtained for carbamazepine and diclofenac, respectively. The findings suggest that immobilized laccase on PVDF/MWCNT membranes is a promising catalyst for large-scale water and wastewater treatment which is also compatible with existing treatment facilities., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier Ltd. All rights reserved.)- Published
- 2021
- Full Text
- View/download PDF
21. Removal of bisphenol A in aqueous solution using magnetic cross-linked laccase aggregates from Trametes hirsuta.
- Author
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Sadeghzadeh S, Ghobadi Nejad Z, Ghasemi S, Khafaji M, and Borghei SM
- Abstract
Enzymatic removal of Bisphenol A (BPA), acknowledged as an environmentally friendly approach, is a promising method to deal with hard degradable contaminants. However, the application of "enzymatic treatment" has been limited due to lower operational stability and practical difficulties associated with recovery and recycling. Enzyme immobilization is an innovative approach which circumvents these drawbacks. In this study, laccase from Trametes hirsuta was used for BPA removal. Amino-functionalized magnetic Fe
3 O4 nanoparticles were synthesized via the co-precipitation method followed by surface modification with (3-aminopropyl)trimethoxysilane (APTMS). The as-prepared nanoparticles were utilized for the immobilization of laccase with the magnetic cross-linked enzyme aggregates method (MCLEAs). Activity recovery of 27% was achieved, while no immobilized laccase was observed in the cross-linked enzyme aggregates method. The performance of immobilized laccase was measured by analyzing the degradation of BPA pollutant. The maximum removal efficiency of 87.3% was attained with an initial concentration of 60 ppm throughout 11 h., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier Ltd. All rights reserved.)- Published
- 2020
- Full Text
- View/download PDF
22. Developing a new approach for (biological) optimal control problems: Application to optimization of laccase production with a comparison between response surface methodology and novel geometric procedure.
- Author
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Ghobadi Nejad Z, Borghei SM, Yaghmaei S, and Hasan-Zadeh A
- Subjects
- Laccase metabolism, Models, Biological, Phanerochaete enzymology
- Abstract
Laccase production by indigenous fungus, Phanerochaete chrysosporium, requires solving optimal problems to determine the maximum production of the enzyme within a definite time period and conditions specified in the solid-state fermentation process. For this purpose, parallel to response surface methodology, an analytical approach has been proposed based on the advanced concepts of Poisson geometry and Lie groups, which lead to a system of the Hamiltonian equations. Despite the dating of the Hamiltonian approach to solving biological problems, the novelty of this paper is based on the expression of a Hamiltonian system in notions of Poisson geometry, Lie algebras and symmetry groups and first integrals. In this way, all collected data and the variables are taken into account in their actual role in the Hamiltonian system without any limitation on their number and dimensions. Also, the Hamiltonian system obtained can be reduced by symmetry concepts of Lie algebras, which result in the exact solution of the initial optimal problem. In addition, it can be converted to Lagrangian and vice versa. The proposed approach applies to the mathematical models describing the production of biomass and lignocellulolytic enzymes, consumption of the lignocellulosic matrix, fermentation model of the Tequila production process, and the laccase production. Ultimately, a comparison between the approximate method for producing laccase using the response surface methodology and the proposed analytical method has been made., (Copyright © 2018 Elsevier Inc. All rights reserved.)
- Published
- 2019
- Full Text
- View/download PDF
23. Biodegradation of cyanide by a new isolated strain under alkaline conditions and optimization by response surface methodology (RSM).
- Author
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Mirizadeh S, Yaghmaei S, and Ghobadi Nejad Z
- Abstract
Background: Biodegradation of free cyanide from industrial wastewaters has been proven as a viable and robust method for treatment of wastewaters containing cyanide., Results: Cyanide degrading bacteria were isolated from a wastewater treatment plant for coke-oven-gas condensate by enrichment culture technique. Five strains were able to use cyanide as the sole nitrogen source under alkaline conditions and among them; one strain (C2) was selected for further studies on the basis of the higher efficiency of cyanide degradation. The bacterium was able to tolerate free cyanide at concentrations of up to 500 ppm which makes it a good potentially candidate for the biological treatment of cyanide contaminated residues. Cyanide degradation corresponded with growth and reached a maximum level 96% during the exponential phase. The highest growth rate (1.23 × 10(8)) was obtained on day 4 of the incubation time. Both glucose and fructose were suitable carbon sources for cyanotrophic growth. No growth was detected in media with cyanide as the sole carbon source. Four control factors including, pH, temperature, agitation speed and glucose concentration were optimized according to central composite design in response surface method. Cyanide degradation was optimum at 34.2°C, pH 10.3 and glucose concentration 0.44 (g/l)., Conclusions: Bacterial species degrade cyanide into less toxic products as they are able to use the cyanide as a nitrogen source, forming ammonia and carbon dioxide as end products. Alkaliphilic bacterial strains screened in this study evidentially showed the potential to possess degradative activities that can be harnessed to remediate cyanide wastes.
- Published
- 2014
- Full Text
- View/download PDF
24. The effect of platelet-rich plasma on healing of palatal donor site following connective tissue harvesting: a pilot study in dogs.
- Author
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Shayesteh YS, Eshghyar N, Moslemi N, Dehghan MM, Motahhary P, Ghobadi Z, and Golestan B
- Subjects
- Animals, Connective Tissue transplantation, Dogs, Growth Substances pharmacology, Male, Pilot Projects, Random Allocation, Wound Healing physiology, Palate, Hard surgery, Platelet-Rich Plasma physiology, Tissue and Organ Harvesting, Wound Healing drug effects
- Abstract
Background: Peri-implant plastic surgery includes soft tissue enhancement by connective tissue grafting. The palatal donor site provides peri-implant keratinized mucosa and soft tissue height. Platelet-rich plasma (PRP) contains growth factors that may enhance early healing., Purpose: The present animal study investigated the effect of PRP on wound healing of palatal donor site after connective tissue harvesting., Materials and Methods: In 12 mongrel dogs, bilateral palatal connective tissues of 10 × 15 mm were harvested. At test site, PRP was applied into the wound, and the contralateral site served as control. The healing was evaluated clinically and histologically at 1 week, 2 weeks, and 4 weeks after surgeries. Exact binomial probability and Wilcoxon signed-rank test were used to compare the clinical and histologic measurements., Results: No statistically significant differences between PRP and control sites were measured with regard to clinical healing (p = 1.000) and histologic variables, including inflammatory cells (p = .750), collagen fibers (p = .375), and granulation tissue (p = .500) at any time interval., Conclusion: The addition of PRP to palatal mucosal wound sites did not accelerate wound healing., (© 2010 Wiley Periodicals, Inc.)
- Published
- 2012
- Full Text
- View/download PDF
25. Acoustically presented semantic decision-making tasks provide a robust depiction of the temporo-parietal speech areas.
- Author
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Jensen-Kondering UR, Ghobadi Z, Wolff S, Jansen O, and Ulmer S
- Subjects
- Adult, Algorithms, Brain Mapping methods, Data Interpretation, Statistical, Electric Stimulation, Female, Frontal Lobe physiology, Functional Laterality physiology, Humans, Image Processing, Computer-Assisted, Magnetic Resonance Imaging, Male, Photic Stimulation, Reading, Rest physiology, Young Adult, Decision Making physiology, Parietal Lobe physiology, Semantics, Speech physiology, Temporal Lobe physiology
- Abstract
Functional MRI (fMRI) is routinely used to depict language areas, for example in the preoperative diagnostic work-up of patients with a brain tumour. The objective of this study was to test whether semantic decision making can activate the temporo-parietal language areas better than phonological generation stimuli. Five fMRI language stimuli were tested in 20 healthy volunteers: (i) word generation to a given letter (WG); (ii) verb generation to a given noun (VG); (iii) generation of groups of words (GW); (iv) detection of a semantic violation in sentences (SV); and (v) detection of pseudowords (PW). The stimuli were presented both visually and acoustically. We used a block design and evaluated the data with SPM5 with predefined regions of interest in the frontal and temporo-parietal language areas. A lateralisation index (LI) was also calculated. We found that WG and VG achieved the best results in frontal language areas; VG, SV and PW presented acoustically achieved the best results in the temporo-parietal language areas; and that LI was most reliably calculated in the frontal language areas. An acoustically presented semantic decision making stimulus should be implemented in the preoperative diagnostic work-up to robustly depict the temporo-parietal language areas. The stimulus is easy to understand and perform, and it achieves robust results., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2012
- Full Text
- View/download PDF
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