90 results on '"Yunhong Zha"'
Search Results
2. Repositioning linifanib as a potent anti-necroptosis agent for sepsis
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Liang Yu, Kai Yang, Xiaoyan He, Min Li, Lin Gao, and Yunhong Zha
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Cytology ,QH573-671 - Abstract
Abstract Sepsis is a systemic inflammatory syndrome (SIRS) caused by acute microbial infection, and it has an extremely high mortality rate. Tumor necrosis factor-α (TNF-α)-induced necroptosis contributes to the pathophysiology of sepsis, so inhibiting necroptosis might be expected to improve clinical outcomes in septic patients. Here we predicted candidate drugs for treating sepsis in silico by combining genes differentially expressed in septic patients and controls combined with interrogation of the Library of Integrated Network-based Cellular Signatures (LINCS) L1000 perturbation database. Sixteen candidate drugs were screened out through bioinformatics analysis, and the top candidate linifanib was validated in cellular and mouse models of TNF-α-induced necroptosis. Cell viability was measured using a luminescent ATP assay, while the effects of linifanib on necroptosis were investigated by western blotting, immunoprecipitation, and RIPK1 kinase assays. Linifanib effectively protected cells from necroptosis and rescued SIRS mice from TNF-α-induced shock and death. In vitro, linifanib directly suppressed RIPK1 kinase activity. In vivo, linifanib effectively reduced overexpressed IL-6, a marker of sepsis severity, in the lungs of SIRS mice. Our preclinical evidence using an integrated in silico and experimental drug repositioning approach supports the potential clinical utility of linifanib in septic patients. Further clinical validation is now warranted.
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- 2023
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3. Cofilin 1 promotes the pathogenicity and transmission of pathological α-synuclein in mouse models of Parkinson’s disease
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Mingmin Yan, Min Xiong, Lijun Dai, Xingyu Zhang, Yunhong Zha, Xiaorong Deng, Zhui Yu, and Zhentao Zhang
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Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract The pathological hallmark of Parkinson’s disease (PD) is the presence of Lewy bodies (LBs) with aggregated α-synuclein being the major component. The abnormal α-synuclein aggregates transfer between cells, recruit endogenous α-synuclein into toxic LBs, and finally trigger neuronal injury. However, the molecular mechanisms mediating the aggregation and transmission of pathological α-synuclein remain unknown. Previously we found that cofilin 1, a member of the actin-binding protein, promotes the aggregation and pathogenicity of α-synuclein in vitro. Here we further investigated the effect of cofilin 1 in mouse models of PD. We found that the mixed fibrils composed of cofilin 1 and α-synuclein are more pathogenic to mice and more prone to propagation than pure α-synuclein fibrils. Overexpression of cofilin 1 enhances the seeding and spreading of α-synuclein aggregates, and induces PD-like behavioral impairments in mice. Together, these results illustrate the important role of cofilin 1 in the pathogenicity and transmission of α-synuclein during the onset and progression of PD.
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- 2022
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4. Therapeutic targeting of both dihydroorotate dehydrogenase and nucleoside transport in MYCN-amplified neuroblastoma
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Yajie Yu, Jane Ding, Shunqin Zhu, Ahmet Alptekin, Zheng Dong, Chunhong Yan, Yunhong Zha, and Han-Fei Ding
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Cytology ,QH573-671 - Abstract
Abstract Metabolic reprogramming is an integral part of the growth-promoting program driven by the MYC family of oncogenes. However, this reprogramming also imposes metabolic dependencies that could be exploited therapeutically. Here we report that the pyrimidine biosynthetic enzyme dihydroorotate dehydrogenase (DHODH) is an attractive therapeutic target for MYCN-amplified neuroblastoma, a childhood cancer with poor prognosis. Gene expression profiling and metabolomic analysis reveal that MYCN promotes pyrimidine nucleotide production by transcriptional upregulation of DHODH and other enzymes of the pyrimidine-synthesis pathway. Genetic and pharmacological inhibition of DHODH suppresses the proliferation and tumorigenicity of MYCN-amplified neuroblastoma cell lines. Furthermore, we obtain evidence suggesting that serum uridine is a key factor in determining the efficacy of therapeutic agents that target DHODH. In the presence of physiological concentrations of uridine, neuroblastoma cell lines are highly resistant to DHODH inhibition. This uridine-dependent resistance to DHODH inhibitors can be abrogated by dipyridamole, an FDA-approved drug that blocks nucleoside transport. Importantly, dipyridamole synergizes with DHODH inhibition to suppress neuroblastoma growth in animal models. These findings suggest that a combination of targeting DHODH and nucleoside transport is a promising strategy to overcome intrinsic resistance to DHODH-based cancer therapeutics.
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- 2021
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5. Conserved Disease Modules Extracted From Multilayer Heterogeneous Disease and Gene Networks for Understanding Disease Mechanisms and Predicting Disease Treatments
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Liang Yu, Shunyu Yao, Lin Gao, and Yunhong Zha
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conserved disease modules ,multilayer networks ,gene networks ,disease mechanisms ,drug repositioning ,Genetics ,QH426-470 - Abstract
Disease relationship studies for understanding the pathogenesis of complex diseases, diagnosis, prognosis, and drug development are important. Traditional approaches consider one type of disease data or aggregating multiple types of disease data into a single network, which results in important temporal- or context-related information loss and may distort the actual organization. Therefore, it is necessary to apply multilayer network model to consider multiple types of relationships between diseases and the important interplays between different relationships. Further, modules extracted from multilayer networks are smaller and have more overlap that better capture the actual organization. Here, we constructed a weighted four-layer disease-disease similarity network to characterize the associations at different levels between diseases. Then, a tensor-based computational framework was used to extract Conserved Disease Modules (CDMs) from the four-layer disease network. After filtering, nine significant CDMs were reserved. The statistical significance test proved the significance of the nine CDMs. Comparing with modules got from four single layer networks, CMDs are smaller, better represent the actual relationships, and contain potential disease-disease relationships. KEGG pathways enrichment analysis and literature mining further contributed to confirm that these CDMs are highly reliable. Furthermore, the CDMs can be applied to predict potential drugs for diseases. The molecular docking techniques were used to provide the direct evidence for drugs to treat related disease. Taking Rheumatoid Arthritis (RA) as a case, we found its three potential drugs Carvedilol, Metoprolol, and Ramipril. And many studies have pointed out that Carvedilol and Ramipril have an effect on RA. Overall, the CMDs extracted from multilayer networks provide us with an impressive understanding disease mechanisms from the perspective of multi-layer network and also provide an effective way to predict potential drugs for diseases based on its neighbors in a same CDM.
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- 2019
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6. Transcriptional Profiling Reveals a Common Metabolic Program in High-Risk Human Neuroblastoma and Mouse Neuroblastoma Sphere-Forming Cells
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Mengling Liu, Yingfeng Xia, Jane Ding, Bingwei Ye, Erhu Zhao, Jeong-Hyeon Choi, Ahmet Alptekin, Chunhong Yan, Zheng Dong, Shuang Huang, Liqun Yang, Hongjuan Cui, Yunhong Zha, and Han-Fei Ding
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cancer metabolism ,cholesterol biosynthesis ,high-risk neuroblastoma ,mevalonate pathway ,MYCN ,neuroblastoma stem cells ,serine-glycine biosynthesis ,statin ,TH-MYCN mouse ,Biology (General) ,QH301-705.5 - Abstract
High-risk neuroblastoma remains one of the deadliest childhood cancers. Identification of metabolic pathways that drive or maintain high-risk neuroblastoma may open new avenues of therapeutic interventions. Here, we report the isolation and propagation of neuroblastoma sphere-forming cells with self-renewal and differentiation potential from tumors of the TH-MYCN mouse, an animal model of high-risk neuroblastoma with MYCN amplification. Transcriptional profiling reveals that mouse neuroblastoma sphere-forming cells acquire a metabolic program characterized by transcriptional activation of the cholesterol and serine-glycine synthesis pathways, primarily as a result of increased expression of sterol regulatory element binding factors and Atf4, respectively. This metabolic reprogramming is recapitulated in high-risk human neuroblastomas and is prognostic for poor clinical outcome. Genetic and pharmacological inhibition of the metabolic program markedly decreases the growth and tumorigenicity of both mouse neuroblastoma sphere-forming cells and human neuroblastoma cell lines. These findings suggest a therapeutic strategy for targeting the metabolic program of high-risk neuroblastoma.
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- 2016
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7. KDM4C and ATF4 Cooperate in Transcriptional Control of Amino Acid Metabolism
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Erhu Zhao, Jane Ding, Yingfeng Xia, Mengling Liu, Bingwei Ye, Jeong-Hyeon Choi, Chunhong Yan, Zheng Dong, Shuang Huang, Yunhong Zha, Liqun Yang, Hongjuan Cui, and Han-Fei Ding
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Biology (General) ,QH301-705.5 - Abstract
The histone lysine demethylase KDM4C is often overexpressed in cancers primarily through gene amplification. The molecular mechanisms of KDM4C action in tumorigenesis are not well defined. Here, we report that KDM4C transcriptionally activates amino acid biosynthesis and transport, leading to a significant increase in intracellular amino acid levels. Examination of the serine-glycine synthesis pathway reveals that KDM4C epigenetically activates the pathway genes under steady-state and serine deprivation conditions by removing the repressive histone modification H3 lysine 9 (H3K9) trimethylation. This action of KDM4C requires ATF4, a transcriptional master regulator of amino acid metabolism and stress responses. KDM4C activates ATF4 transcription and interacts with ATF4 to target serine pathway genes for transcriptional activation. We further present evidence for KDM4C in transcriptional coordination of amino acid metabolism and cell proliferation. These findings suggest a molecular mechanism linking KDM4C-mediated H3K9 demethylation and ATF4-mediated transactivation in reprogramming amino acid metabolism for cancer cell proliferation.
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- 2016
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8. Functional dissection of HOXD cluster genes in regulation of neuroblastoma cell proliferation and differentiation.
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Yunhong Zha, Emily Ding, Liqun Yang, Ling Mao, Xiangwei Wang, Brian A McCarthy, Shuang Huang, and Han-Fei Ding
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Medicine ,Science - Abstract
Retinoic acid (RA) can induce growth arrest and neuronal differentiation of neuroblastoma cells and has been used in clinic for treatment of neuroblastoma. It has been reported that RA induces the expression of several HOXD genes in human neuroblastoma cell lines, but their roles in RA action are largely unknown. The HOXD cluster contains nine genes (HOXD1, HOXD3, HOXD4, and HOXD8-13) that are positioned sequentially from 3' to 5', with HOXD1 at the 3' end and HOXD13 the 5' end. Here we show that all HOXD genes are induced by RA in the human neuroblastoma BE(2)-C cells, with the genes located at the 3' end being activated generally earlier than those positioned more 5' within the cluster. Individual induction of HOXD8, HOXD9, HOXD10 or HOXD12 is sufficient to induce both growth arrest and neuronal differentiation, which is associated with downregulation of cell cycle-promoting genes and upregulation of neuronal differentiation genes. However, induction of other HOXD genes either has no effect (HOXD1) or has partial effects (HOXD3, HOXD4, HOXD11 and HOXD13) on BE(2)-C cell proliferation or differentiation. We further show that knockdown of HOXD8 expression, but not that of HOXD9 expression, significantly inhibits the differentiation-inducing activity of RA. HOXD8 directly activates the transcription of HOXC9, a key effector of RA action in neuroblastoma cells. These findings highlight the distinct functions of HOXD genes in RA induction of neuroblastoma cell differentiation.
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- 2012
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9. OPTN variants in ALS cases: a case report of a novel mutation and literature review
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Yan, Mou, Min, Li, Mengling, Liu, Jia, Wang, Guofeng, Zhu, and Yunhong, Zha
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Male ,Heterozygote ,Psychiatry and Mental health ,Phenotype ,Transcription Factor TFIIIA ,Amyotrophic Lateral Sclerosis ,Mutation ,Humans ,Cell Cycle Proteins ,Female ,Neurology (clinical) ,Dermatology ,General Medicine - Abstract
Optineurin (OPTN)-associated mutations have been implicated in the development of type 12 amyotrophic lateral sclerosis (ALS12). We reported a case of ALS with a new OPTN variant (p.D527fs) and reviewed relevant literature to better understand the phenotypes and pathophysiological mechanisms of ALS12.We report a case of a 55-year-old female patient with a new heterozygous variant of the OPTN gene. A literature search of ALS cases associated with the OPTN gene mutations was performed in PubMed with the search criteria as [("amyotrophic lateral sclerosis") OR ("motor neuron disease")] AND ("OPTN").The case of ALS with a new OPTN variant (p.D527fs) in our report manifested with bulbar involvement in onset and a rapidly progressive course. A literature review of 37 ALS patients with OPTN mutations included 20 males and 16 females with another patient whose gender was not described. The mean onset age of 37 ALS12 patients was 48 with the youngest 23 and the oldest 83 years old. Differences in onset age between male and female patients were not significant. Mean time from initiation to death was 61.8 ± 12.0 months. Patients present with either limb onset (73.5% cases) or bulbar onset (23.5% cases).Through the literature review, we summarized the clinical characteristics of ALS12. The phenotypes of the reported patients elucidate the genetic profiles and clinical phenotypes of ALS12. Clinicians should pay close attention to the role of receptor-interacting kinase 1 (RIPK1)-dependent necroptosis in the pathophysiologic development of ALS12, since necroptosis inhibitors are expected as potential therapeutic agents for treating ALS12.
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- 2022
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10. Identification of Piperlongumine as Potent Inhibitor of Necroptosis
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Xiaoyan He, Min Li, Zhi Ye, Xiaoling You, Jia Wang, Xin Xiao, Guofeng Zhu, Jun Wei, and Yunhong Zha
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Pharmacology ,Drug Design, Development and Therapy ,Drug Discovery ,Pharmaceutical Science - Abstract
Xiaoyan He,* Min Li,* Zhi Ye,* Xiaoling You, Jia Wang, Xin Xiao, Guofeng Zhu, Jun Wei, Yunhong Zha Department of Neurology, Institute of Neural Regeneration and Repair, Hubei Clinical Medical Research Center for Rare Disease of Nervous System, The First Hospital of Yichang, Medical College of China Three Gorges University, Yichang, Peopleâs Republic of China*These authors contributed equally to this workCorrespondence: Jun Wei; Yunhong Zha, Tel +86-15090922368 ; +86-13872662508, Email junwei@ctgu.edu.cn; yzha7808@ctgu.edu.cnPurpose: Excessive necroptosis contributes to the pathogenesis of several inflammatory and neurodegenerative diseases. Here, using a high-throughput screening approach, we investigated the anti-necroptosis effects of piperlongumine, an alkaloid isolated from the long pepper plant, in vitro and in a mouse model of systemic inflammatory response syndrome (SIRS).Methods: A natural compound library was screened for anti-necroptosis effects in cellular. The underlying mechanism of action of the top candidate piperlongumine was explored by quantifying the necroptosis marker phosphorylated receptor-interacting protein kinase 1 (p-RIPK1) by Western blotting. The anti-inflammatory effect of piperlongumine was assessed in a tumor necrosis factor α (TNFα)-induced SIRS model in mice.Results: Among the compounds investigated, piperlongumine significantly rescued cell viability. The half maximal effective concentration (EC50) of piperlongumine for inhibiting necroptosis was 0.47 μM in HT-29 cells, 6.41 μM in FADD-deficient Jurkat cells, and 2.33 μM in CCRF-CEM cells, while the half maximal inhibitory concentration (IC50) was 95.4 μM in HT-29 cells, 93.02 μM in FADD-deficient Jurkat cells, and 161.1 μM in CCRF-CEM cells. Piperlongumine also significantly inhibited TNFα-induced intracellular RIPK1 Ser166 phosphorylation in cell lines and significantly prevented decreases in body temperature and improved survival in SIRS mice.Conclusion: As a potent necroptosis inhibitor, piperlongumine prevents phosphorylation of RIPK1 at its activation residue Ser166. Piperlongumine thus potently inhibits necroptosis at concentrations safe enough for human cells in vitro and inhibits TNFα-induced SIRS in mice. Piperlongumine has potential clinical translational value for the treatment of the spectrum of diseases associated with necroptosis, including SIRS.Keywords: piperlongumine, natural product, drug repositioning, necroptosis, RIPK1
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- 2023
11. Caffeine supplementation and FOXM1 inhibition enhance the antitumor effect of statins in neuroblastoma
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Gia-Buu Tran, Jane Ding, Bingwei Ye, Mengling Liu, Yajie Yu, Yunhong Zha, Zheng Dong, Kebin Liu, Sunil Sudarshan, and Han-Fei Ding
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Cancer Research ,Oncology - Abstract
High-risk neuroblastoma exhibits transcriptional activation of the mevalonate pathway that produces cholesterol and non-sterol isoprenoids. A better understanding of how this metabolic reprogramming contributes to neuroblastoma development could help identify potential prevention and treatment strategies. Here, we report that both the cholesterol and non-sterol geranylgeranyl-pyrophosphate branches of the mevalonate pathway are critical to sustain neuroblastoma cell growth. Blocking the mevalonate pathway by simvastatin, a cholesterol-lowering drug, impeded neuroblastoma growth in neuroblastoma cell line xenograft, patient-derived xenograft (PDX), and TH-MYCN transgenic mouse models. Transcriptional profiling revealed that the mevalonate pathway was required to maintain the FOXM1-mediated transcriptional program that drives mitosis. High FOXM1 expression contributed to statin resistance and led to a therapeutic vulnerability to the combination of simvastatin and FOXM1 inhibition. Furthermore, caffeine synergized with simvastatin to inhibit the growth of neuroblastoma cells and PDX tumors by blocking statin-induced feedback activation of the mevalonate pathway. This function of caffeine depended on its activity as an adenosine receptor antagonist, and the A2A adenosine receptor antagonist istradefylline, an add-on drug for Parkinson's disease, could recapitulate the synergistic effect of caffeine with simvastatin. This study reveals that the FOXM1-mediated mitotic program is a molecular statin target in cancer and identifies classes of agents for maximizing the therapeutic efficacy of statins with implications for treatment of high-risk neuroblastoma
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- 2023
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12. Supplementary Data from Metabolic Reprogramming by MYCN Confers Dependence on the Serine-Glycine-One-Carbon Biosynthetic Pathway
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Han-Fei Ding, Yunhong Zha, Zheng Dong, Chunhong Yan, Oliver Fiehn, Bei Gao, Jeong-Hyeon Choi, Eun Jeong Park, Zhi-Chun Ding, Puttur D. Prasad, Muthusamy Thangaraju, Ahmet Alptekin, Yajie Yu, Jane Ding, Bingwei Ye, and Yingfeng Xia
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Supplementary Figures: SF1, MYCN amplification vs SGOC gene expression; SF2, MYCN activates SGOC gene expression; SF3, ATF4 activates SGOC gene expression; SF4, MYCN and ATF4 form a positive feedback loop; SF5, MYCN sensitizes neuroblastoma cells to PHGDH inhibition; SF6, PHGDH inhibition induces metabolic stress response. Supplementary Materials and Methods
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- 2023
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13. Table S1 from Metabolic Reprogramming by MYCN Confers Dependence on the Serine-Glycine-One-Carbon Biosynthetic Pathway
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Han-Fei Ding, Yunhong Zha, Zheng Dong, Chunhong Yan, Oliver Fiehn, Bei Gao, Jeong-Hyeon Choi, Eun Jeong Park, Zhi-Chun Ding, Puttur D. Prasad, Muthusamy Thangaraju, Ahmet Alptekin, Yajie Yu, Jane Ding, Bingwei Ye, and Yingfeng Xia
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List of genes regulated by the PHGDH inhibitor NCT-503
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- 2023
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14. Data from Metabolic Reprogramming by MYCN Confers Dependence on the Serine-Glycine-One-Carbon Biosynthetic Pathway
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Han-Fei Ding, Yunhong Zha, Zheng Dong, Chunhong Yan, Oliver Fiehn, Bei Gao, Jeong-Hyeon Choi, Eun Jeong Park, Zhi-Chun Ding, Puttur D. Prasad, Muthusamy Thangaraju, Ahmet Alptekin, Yajie Yu, Jane Ding, Bingwei Ye, and Yingfeng Xia
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MYCN amplification drives the development of neuronal cancers in children and adults. Given the challenge in therapeutically targeting MYCN directly, we searched for MYCN-activated metabolic pathways as potential drug targets. Here we report that neuroblastoma cells with MYCN amplification show increased transcriptional activation of the serine-glycine-one-carbon (SGOC) biosynthetic pathway and an increased dependence on this pathway for supplying glucose-derived carbon for serine and glycine synthesis. Small molecule inhibitors that block this metabolic pathway exhibit selective cytotoxicity to MYCN-amplified cell lines and xenografts by inducing metabolic stress and autophagy. Transcriptional activation of the SGOC pathway in MYCN-amplified cells requires both MYCN and ATF4, which form a positive feedback loop, with MYCN activation of ATF4 mRNA expression and ATF4 stabilization of MYCN protein by antagonizing FBXW7-mediated MYCN ubiquitination. Collectively, these findings suggest a coupled relationship between metabolic reprogramming and increased sensitivity to metabolic stress, which could be exploited as a strategy for selective cancer therapy.Significance:This study identifies a MYCN-dependent metabolic vulnerability and suggests a coupled relationship between metabolic reprogramming and increased sensitivity to metabolic stress, which could be exploited for cancer therapy.See related commentary by Rodriguez Garcia and Arsenian-Henriksson, p. 3818
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- 2023
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15. Supplementary Methods, Figures 1-13, Tables 1-4 from HOXC9 Links Cell-Cycle Exit and Neuronal Differentiation and Is a Prognostic Marker in Neuroblastoma
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Han-Fei Ding, Hongjuan Cui, William King, Brian A. McCarthy, Liqun Yang, Yunhong Zha, Jane Ding, and Ling Mao
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Supplementary Methods, Figures 1-13, Tables 1-4 from HOXC9 Links Cell-Cycle Exit and Neuronal Differentiation and Is a Prognostic Marker in Neuroblastoma
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- 2023
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16. Flexible Graphene Field-Effect Transistors and Their Application in Flexible Biomedical Sensing
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Mingyuan Sun, Shuai Wang, Yanbo Liang, Chao Wang, Yunhong Zhang, Hong Liu, Yu Zhang, and Lin Han
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Flexible ,Graphene ,Field-effect transistor ,Wearable ,Implantable ,Biosensor ,Technology - Abstract
Highlights The review provides a brief overview of the basic structure, operating mechanism, and key performance indicators of flexible graphene field-effect transistors. The review details the preparation strategy of flexible graphene field-effect transistors focusing on material selection and patterning techniques. The review analyzes the latest strategies for developing wearable and implantable flexible biomedical sensors based on flexible graphene field-effect transistors.
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- 2024
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17. MIR937 amplification potentiates ovarian cancer progression by attenuating FBXO16 inhibition on ULK1-mediated autophagy
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Zhen Zhang, Xinkui Liu, Chu Chu, Yingjie Zhang, Wei Li, Xiaoyan Yu, Qiaoqiao Han, Haoyu Sun, Yunhong Zhang, Xiaoxiao Zhu, Liang Chen, Ran Wei, Nannan Fan, Miaomiao Zhou, and Xia Li
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Cytology ,QH573-671 - Abstract
Abstract High-grade serous ovarian carcinoma (HGSOC) is one of the most lethal gynecological cancer. Genetic studies have revealed gene copy number alterations (CNAs) frequently occurred in HGSOC pathogenesis, however the function and mechanism of CNAs for microRNAs are still not fully understood. Here, we show the dependence on gene copy number amplification of MIR937 that enhances cell autophagy and dictates HGSOC proliferative activity. Data mining of TCGA database revealed MIR937 amplification is correlated with increased MIR937 expression and cell proliferation of HGSOC. Deletion of MIR937 in HGSOC cells led to impaired autophagy and retarded cell proliferation, and the extent for its inhibitory effects scaled with the degree of MIR937 copy loss. Rescue assay confirmed miR-937-5p, a mature product of MIR937, was sufficient to restore its oncogenic function. Mechanistically, MIR937 amplification raised the expression of miR-937-5p, enhanced its binding to 3′ UTR of FBXO16 transcript, and thereby restricting FBXO16 degradative effects on ULK1. Our results demonstrate that MIR937 amplification augments cell autophagy and proliferation, and suggest an alternative strategy of MIR937/FBXO16/ULK1 targeting for HGSOC treatment.
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- 2024
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18. Machine learning assisted screening of two dimensional chalcogenide ferromagnetic materials with Dzyaloshinskii Moriya interaction
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Peng Han, Jingtong Zhang, Shengbin Shi, Yunhong Zhao, Yajun Zhang, and Jie Wang
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Materials of engineering and construction. Mechanics of materials ,TA401-492 ,Computer software ,QA76.75-76.765 - Abstract
Abstract Magnetic skyrmions are potential candidates for high-density storage and logic devices because of their inherent topological stability and nanoscale size. Two-dimensional (2D) Janus transition metal chalcogenides (TMDs) are widely used to induce skyrmions due to the breaking of inversion symmetry. However, the experimental synthesis of Janus TMDs is rare, which indicates that the Janus configuration might not be the most stable MXY structure. Here, through machine-learning-assisted high-throughput first-principles calculations, we demonstrate that not all MXY compounds can be stabilized in Janus layered structure and a large proportion prefer to form other configurations with lower energy than the Janus configuration. Interestingly, these new configurations exhibit a strong Dzyaloshinskii–Moriya interaction (DMI), which can generate and stabilize skyrmions even under a strong magnetic field. This work provides not only an efficient method for obtaining ferromagnetic materials with strong DMI but also a theoretical guidance for the synthesis of TMDs via experiments.
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- 2024
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19. Insights into the assembly of the neovaginal microbiota in Mayer-Rokitansky-Küster-Hauser (MRKH) syndrome patients
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Na Chen, Lilan Hao, Zhe Zhang, Chenglu Qin, Zhuye Jie, Hongxin Pan, Jiali Duan, Xincheng Huang, Yunhong Zhang, Hongqin Gao, Ruike Lu, Tianshu Sun, Hua Yang, Jinqiu Shi, Maolian Liang, Jianbin Guo, Qianqian Gao, Xiaoyue Zhao, Zhiyuan Dou, Liang Xiao, Shaoqiao Zhang, Xin Jin, Xun Xu, Huanming Yang, Jian Wang, Huijue Jia, Tao Zhang, Karsten Kristiansen, Chen Chen, and Lan Zhu
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Science - Abstract
Abstract Neovaginas are surgically constructed to correct uterovaginal agenesis in women with Mayer-Rokitansky-Küster-Hauser (MRKH) syndrome or as part of gender-affirming surgery for transfeminine individuals. Understanding the assembly of the neovaginal microbiota is crucial for guiding its management. To address this, we conducted a longitudinal study on MRKH patients following laparoscopic peritoneal vaginoplasty. Our findings reveal that the early microbial assemblage exhibited stochastic characteristics, accompanied with a notable bloom of Enterococcus faecalis and genital Mycoplasmas. While both the pre-surgery dimple microbiota and the fecal microbiota constituted the primary species pool, the neovaginal microbiota developed into a microbiota that resembled that of a normal vagina at 6–12 months post-surgery, albeit with a bacterial vaginosis (BV)-like structure. By 2–4 years post-surgery, the neovaginal microbiota had further evolved into a structure closely resembling with the homeostatic pre-surgery dimple microbiota. This concords with the development of the squamous epithelium in the neovagina and highlights the pivotal roles of progressive selective forces imposed by the evolving neovaginal environment and the colonization tropism of vaginal species. Notably, we observed that strains of Lactobacillus crispatus colonizing the neovagina primarily originated from the dimple. Since L. crispatus is generally associated with vaginal health, this finding suggests potential avenues for future research to promote its colonization.
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- 2024
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20. Becker muscular dystrophy: case report, review of the literature, and analysis of differentially expressed hub genes
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Liang Yu, Mengling Liu, Shuying Wang, Zhi He, He Xiaoyan, Wang Jun, Yongli Han, Ling Zhou, Yajie Yu, Ze’an Weng, Min Li, Yunhong Zha, and Yingfeng Xia
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Male ,musculoskeletal diseases ,Proband ,Neuromuscular disease ,Duchenne muscular dystrophy ,Gene Expression ,Dermatology ,Bioinformatics ,Humans ,Medicine ,Family ,Muscular dystrophy ,Child ,Extracellular structure organization ,X-linked recessive inheritance ,business.industry ,Microarray analysis techniques ,General Medicine ,musculoskeletal system ,medicine.disease ,Muscular Dystrophy, Duchenne ,Psychiatry and Mental health ,Mutation ,Neurology (clinical) ,business ,Extracellular matrix organization - Abstract
INTRODUCTION Becker muscular dystrophy (BMD) is a genetic and progressive neuromuscular disease caused by mutations in the dystrophin gene with no available cure. A case report and comprehensive review of BMD cases aim to provide important clues for early diagnosis and implications for clinical practice. Genes and pathways identified from microarray data of muscle samples from patients with BMD help uncover the potential mechanism and provide novel therapeutic targets for dystrophin-deficient muscular dystrophies. METHODS We describe a BMD family with a 10-year-old boy as the proband and reviewed BMD cases from PubMed. Datasets from the Gene Expression Omnibus database were downloaded and integrated with the online software. RESULTS The systematic review revealed the clinical manifestations and mutation points of the dystrophin gene. Gene ontology analysis showed that extracellular matrix organization and extracellular structure organization with enrichment of upregulated genes coexist in three datasets. We present the first report of TUBA1A involvement in the development of BMD/Duchenne muscular dystrophy (DMD). DISCUSSION This study provides important implications for clinical practice, uncovering the potential mechanism of the progress of BMD/DMD, and provided new therapeutic targets.
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- 2021
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21. Therapeutic targeting of both dihydroorotate dehydrogenase and nucleoside transport in MYCN-amplified neuroblastoma
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Zheng Dong, Jane Ding, Yunhong Zha, Han Fei Ding, Chunhong Yan, Yajie Yu, Ahmet Alptekin, and Shunqin Zhu
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Male ,Cancer Research ,Transcription, Genetic ,Cancer therapy ,Carcinogenesis ,Immunology ,Carbazoles ,Dihydroorotate Dehydrogenase ,Mice, SCID ,Article ,Cellular and Molecular Neuroscience ,chemistry.chemical_compound ,Neuroblastoma ,Downregulation and upregulation ,Mice, Inbred NOD ,Cell Line, Tumor ,medicine ,Animals ,Humans ,Nucleotide ,Molecular Targeted Therapy ,Enzyme Inhibitors ,Uridine ,Cell Proliferation ,chemistry.chemical_classification ,N-Myc Proto-Oncogene Protein ,QH573-671 ,Biphenyl Compounds ,Gene Amplification ,Biological Transport ,Nucleosides ,Cell Biology ,medicine.disease ,Cancer metabolism ,Gene expression profiling ,chemistry ,Cancer research ,Dihydroorotate dehydrogenase ,Female ,Cytology ,Reprogramming ,Nucleoside - Abstract
Metabolic reprogramming is an integral part of the growth-promoting program driven by the MYC family of oncogenes. However, this reprogramming also imposes metabolic dependencies that could be exploited therapeutically. Here we report that the pyrimidine biosynthetic enzyme dihydroorotate dehydrogenase (DHODH) is an attractive therapeutic target for MYCN-amplified neuroblastoma, a childhood cancer with poor prognosis. Gene expression profiling and metabolomic analysis reveal that MYCN promotes pyrimidine nucleotide production by transcriptional upregulation of DHODH and other enzymes of the pyrimidine-synthesis pathway. Genetic and pharmacological inhibition of DHODH suppresses the proliferation and tumorigenicity of MYCN-amplified neuroblastoma cell lines. Furthermore, we obtain evidence suggesting that serum uridine is a key factor in determining the efficacy of therapeutic agents that target DHODH. In the presence of physiological concentrations of uridine, neuroblastoma cell lines are highly resistant to DHODH inhibition. This uridine-dependent resistance to DHODH inhibitors can be abrogated by dipyridamole, an FDA-approved drug that blocks nucleoside transport. Importantly, dipyridamole synergizes with DHODH inhibition to suppress neuroblastoma growth in animal models. These findings suggest that a combination of targeting DHODH and nucleoside transport is a promising strategy to overcome intrinsic resistance to DHODH-based cancer therapeutics.
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- 2021
22. Repurposing crizotinib to target RIPK1-dependent cell death
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Yajie Yu, Min Li, Shufang Fu, Xiaoyan He, Xinqian Hu, Guofeng Zhu, Jia Wang, Xiaoling You, Yan Mou, Zhi Ye, Jun Wei, and Yunhong Zha
- Subjects
Immunology ,Immunology and Allergy ,General Medicine - Abstract
Receptor-interacting protein kinase 1 (RIPK1) has emerged as a key regulator of cell death and inflammation, which are implicated in the pathogenesis of many inflammatory and degenerative diseases. RIPK1 is therefore a putative therapeutic target in many of these diseases. However, no pharmacological inhibitor of RIPK1-mediated cell death is currently in clinical use. Recognizing that a repurposed drug has an expedited clinical development pipeline, here we performed a high-throughput drug screen of Food and Drug Administration (FDA)-approved compounds and identified a novel use for crizotinib as an inhibitor of RIPK1-dependent cell death. Furthermore, crizotinib rescued TNF-α-induced death in mice with systemic inflammatory response syndrome. RIPK1 kinase activity was directly inhibited by crizotinib. These findings identify a new use for an established compound and are expected to accelerate drug development for RIPK1-spectrum disorders.
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- 2022
23. Histone demethylase KDM6B has an anti-tumorigenic function in neuroblastoma by promoting differentiation
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Yunhong Zha, Bingwei Ye, Mengling Liu, Han Fei Ding, Chunhong Yan, Jane Ding, Hongjuan Cui, Zheng Dong, and Liqun Yang
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0303 health sciences ,Cancer Research ,biology ,Cell growth ,Retinoic acid ,medicine.disease ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,lcsh:RC254-282 ,Article ,Chromatin ,Cell biology ,03 medical and health sciences ,chemistry.chemical_compound ,Histone H3 ,0302 clinical medicine ,Histone ,chemistry ,030220 oncology & carcinogenesis ,Neuroblastoma ,biology.protein ,medicine ,Demethylase ,Epigenetics ,Molecular Biology ,030304 developmental biology - Abstract
Induction of differentiation is a therapeutic strategy in high-risk neuroblastoma, a childhood cancer of the sympathetic nervous system. Neuroblastoma differentiation requires transcriptional upregulation of neuronal genes. How this process is regulated at epigenetic levels is not well understood. Here we report that the histone H3 lysine 27 demethylase KDM6B is an epigenetic activator of neuroblastoma cell differentiation. KDM6B mRNA expression is downregulated in poorly differentiated high-risk neuroblastomas and upregulated in differentiated tumors, and high KDM6B expression is prognostic for better survival in neuroblastoma patients. In neuroblastoma cell lines, KDM6B depletion promotes cell proliferation, whereas KDM6B overexpression induces neuronal differentiation and inhibits cell proliferation and tumorgenicity. Mechanistically, KDM6B epigenetically activates the transcription of neuronal genes by removing the repressive chromatin marker histone H3 lysine 27 trimethylation. In addition, we show that KDM6B functions downstream of the retinoic acid-HOXC9 axis in inducing neuroblastoma cell differentiation: KDM6B expression is upregulated by retinoic acid via HOXC9, and KDM6B is required for HOXC9-induced neuroblastoma cell differentiation. Finally, we present evidence that KDM6B interacts with HOXC9 to target neuronal genes for epigenetic activation. These findings identify a KDM6B-dependent epigenetic mechanism in the control of neuroblastoma cell differentiation, providing a rationale for reducing histone H3 lysine 27 trimethylation as a strategy for enhancing differentiation-based therapy in high-risk neuroblastoma.
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- 2019
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24. Social exclusion: differences in neural mechanisms underlying direct versus vicarious experience
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Juan Song, Tao Lian, Yunhong Zhang, Mingjing Cao, and Zhibin Jiao
- Subjects
social exclusion ,observer ,vicarious experience ,empathy ,functional near-infrared spectroscopy ,Psychology ,BF1-990 - Abstract
Social exclusion stands as a source of social discord and holds substantial research value. Prior investigations on social exclusion have overlooked the interactive relationship between the excluded individuals and the observers. Hence, this study comparatively explores the neural mechanisms underlying the psychological responses of two distinct roles within the same social exclusion context. A total of 35 pairs (19 pairs of females) participated in the experiment. Within each pair, one individual assumed the role of a socially excluded participant (target), while the other acted as a social exclusion observer. Targets engaged in an online ball-passing game where controlled ball allocations to the participants created an exclusion scenario. Meanwhile, observers spectated the targets playing the game. Throughout the ball-passing activity, functional near-infrared spectroscopy (fNIRS) recorded the blood oxygen data in the prefrontal cortex (PFC) and temporoparietal junction (TPJ) of both participants. Our findings revealed varied levels of rejection sensitivity elicited by direct or observed social exclusion experiences. Additionally, distinct patterns of neural activation were observed: targets displayed conditional differences in the medial prefrontal cortex (mPFC), while male observers exhibited conditional activation differences in the mPFC, and female observers showed conditional activation differences in the right dorsolateral prefrontal cortex (dlPFC). This study juxtaposes the behavioral and neural activation variances between targets and observers within the same social context, offering a novel perspective on investigating the neural mechanisms of social exclusion.
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- 2024
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25. Association between perceived overqualification, work engagement, job satisfaction among nurses: a cross-sectional study
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Ting Li, Yuan Zhao, Lu Zhou, Xiaoling Zhu, Cuixian Li, Hongbo Shi, Yunhong Zhang, and Qin Guan
- Subjects
Medicine - Abstract
Objectives This cross-sectional correlational study aimed to understand nurses’ perceived overqualification and work engagement, explore their effects on job satisfaction and provide a theoretical basis for hospital management policies in a public comprehensive tertiary hospital in China.Design Cross-sectional correlational study.Setting The study was conducted in a public comprehensive tertiary hospital in China. The specific location is not disclosed.Participants 584 nurses participated in the study, with a completion rate of 97.3%. The average age of participants was 34.8±6.7 years, with 96.4% being women. 67.8% held a bachelor’s degree or higher, and 71.6% had over 5 years of work experience.Primary and secondary outcome measures The Scale of Perceived Overqualification was used to assess nurses’ perceptions of their qualifications, demonstrating a high level of reliability with a Cronbach’s alpha coefficient of 0.832. Utrecht Work Engagement Scale was used to assess nurses’ work engagement, showing internal consistency coefficients (Cronbach’s alpha) of 0.683 for the vigour dimension, 0.693 for the dedication dimension and 0.834 for the absorption dimension. Minnesota Satisfaction Questionnaire was used to evaluate nurses’ job satisfaction, with internal consistency coefficients (Cronbach’s alpha) of 0.765 for the intrinsic satisfaction scale and 0.734 for the extrinsic satisfaction scale. The primary outcome measures included perceived overqualification, work engagement and job satisfaction.Results The average scores for perceived overqualification, work engagement and job satisfaction were 26.38±3.44, 65.36±14.92 and 74.29±15.04, respectively. Perceived overqualification showed negative correlations with work engagement (r=−0.562, p
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- 2024
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26. Predictive value of adipokines for the severity of acute pancreatitis: a meta-analysis
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Xuehua Yu, Ning Zhang, Jing Wu, Yunhong Zhao, Chengjiang Liu, and Gaifang Liu
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Adipokines ,Acute pancreatitis ,Resistin ,Meta-analysis ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Abstract Background Severe acute pancreatitis (SAP) is a dangerous condition with a high mortality rate. Many studies have found an association between adipokines and the development of SAP, but the results are controversial. Therefore, we performed a meta-analysis of the association of inflammatory adipokines with SAP. Methods We screened PubMed, EMBASE, Web of Science and Cochrane Library for articles on adipokines and SAP published before July 20, 2023. The quality of the literature was assessed using QUADAS criteria. Standardized mean differences (SMD) with 95% confidence intervals (CI) were calculated to assess the combined effect. Subgroup analysis, sensitivity analysis and publication bias tests were also performed on the information obtained. Result Fifteen eligible studies included 1332 patients with acute pancreatitis (AP). Pooled analysis showed that patients with SAP had significantly higher serum levels of resistin (SMD = 0.78, 95% CI:0.37 to 1.19, z = 3.75, P = 0.000). The difference in leptin and adiponectin levels between SAP and mild acute pancreatitis (MAP) patients were not significant (SMD = 0.30, 95% CI: -0.08 to 0.68, z = 1.53, P = 0.127 and SMD = 0.11, 95% CI: -0.17 to 0.40, z = 0.80, P = 0.425, respectively). In patients with SAP, visfatin levels were not significantly different from that in patients with MAP (SMD = 1.20, 95% CI: -0.48 to 2.88, z = 1.40, P = 0.162). Conclusion Elevated levels of resistin are associated with the development of SAP. Resistin may serve as biomarker for SAP and has promise as therapeutic target.
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- 2024
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27. Cofilin 1 promotes the aggregation and cell-to-cell transmission of α-synuclein in Parkinson's disease
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Xingyu Zhang, Yan Zeng, Guiqin Chen, Zhentao Zhang, Lijun Dai, Mingmin Yan, Yunhong Zha, Lanxia Meng, and Yongfa Zheng
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0301 basic medicine ,Cofilin 1 ,Parkinson's disease ,animal diseases ,Biophysics ,Mice, Transgenic ,macromolecular substances ,Fibril ,Biochemistry ,Pathogenesis ,03 medical and health sciences ,Protein Aggregates ,0302 clinical medicine ,Mediator ,Cell to cell transmission ,mental disorders ,medicine ,Animals ,Humans ,Molecular Biology ,Chemistry ,Brain ,Parkinson Disease ,Cell Biology ,medicine.disease ,nervous system diseases ,Cell biology ,030104 developmental biology ,HEK293 Cells ,nervous system ,030220 oncology & carcinogenesis ,alpha-Synuclein ,α synuclein ,Intracellular ,Protein Binding - Abstract
The histopathological hallmark of Parkinson's disease (PD) is the presence of fibrillar aggregates referred to as Lewy bodies (LBs), in which α-synuclein is the major component. Converging evidence supports the prion-like transmission of α-synuclein aggregates in the onset and progression of PD. Intracellular α-synuclein aggregates into pathological fibrils, which can be transferred from aggregate-producing cells to aggregate-free cells, triggering neuronal injury and the progression of pathology. However, the specific mechanisms mediating the aggregation and transmission of pathological α-synuclein remain unknown. Here we show that cofilin 1 binds to α-synuclein and promotes its aggregation. The mixed fibrils consist of cofilin 1 and α-synuclein are more compact and more potent than pure α-synuclein fibrils in seeding α-synuclein aggregation. Cofilin 1 also facilitates the uptake of α-synuclein fibrils and finally induces neuronal dysfunction. Together, these observations indicate that cofilin 1 acts as a crucial mediator in the aggregation and propagation of pathological α-synuclein, contributing to the pathogenesis of PD.
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- 2020
28. Prediction of drug response in multilayer networks based on fusion of multiomics data
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Yunhong Zha, Dandan Zhou, Lin Gao, and Liang Yu
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0303 health sciences ,Fusion ,DNA Copy Number Variations ,Computer science ,business.industry ,Feature vector ,030302 biochemistry & molecular biology ,Computational Biology ,Computational biology ,Sensor fusion ,General Biochemistry, Genetics and Molecular Biology ,Machine Learning ,03 medical and health sciences ,Pharmaceutical Preparations ,Neoplasms ,Drug response ,Humans ,Personalized medicine ,Copy-number variation ,Precision Medicine ,business ,Representation (mathematics) ,Molecular Biology ,030304 developmental biology ,Network model - Abstract
Predicting the response of each individual patient to a drug is a key issue assailing personalized medicine. Our study predicted drug response based on the fusion of multiomics data with low-dimensional feature vector representation on a multilayer network model. We named this new method DREMO (Drug Response prEdiction based on MultiOmics data fusion). DREMO fuses similarities between cell lines and similarities between drugs, thereby improving the ability to predict the response of cancer cell lines to therapeutic agents. First, a multilayer similarity network related to cell lines and drugs was constructed based on gene expression profiles, somatic mutation, copy number variation (CNV), drug chemical structures, and drug targets. Next, low-dimensional feature vector representation was used to fuse the biological information in the multilayer network. Then, a machine learning model was applied to predict new drug-cell line associations. Finally, our results were validated using the well-established GDSC/CCLE databases, literature, and the functional pathway database. Furthermore, a comparison was made between DREMO and other methods. Results of the comparison showed that DREMO improves predictive capabilities significantly.
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- 2020
29. Do color enhancement algorithms improve the experience of color-deficient people? An empirical study based on smartphones
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Yunhong Zhang, Yuelin Hu, Jun Tan, Ruiqing Ma, Feng Si, and Yi Yang
- Subjects
color blindness ,color weakness ,smartphone ,color-enhancing ,user experience ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Approximately 8% of the global population experiences color-vision deficiency. It is important to note that “color-vision deficiency” is distinct from “color blindness,” as used in this article, which refers to the difficulty in distinguishing certain shades of color. This study explores color enhancement algorithms based on the neural mechanisms of color blindness and color deficiency. The algorithms are then applied to smartphones to improve the user experience (UX) of color-enhancing features in different top-selling smartphone brands with different operating systems (OS). A color-enhancing application program was developed for individuals with color-vision deficiency and compared to two other mature color-enhancing programs found in top-selling smartphones with different mainstream operating systems. The study included both objective and subjective evaluations. The research materials covered three aspects: daily life, information visualization, and videos. Additionally, this research study examines various levels of color enhancement through three dimensions of subjective evaluation: color contrast, color naturalness, and color preference. The results indicate that all color-enhancing features are beneficial for individuals with color-vision deficiencies due to their strong color contrast. The users' color preference is closely linked to color naturalness. The application program preserves the naturalness of colors better than the other two color-enhancing features. The subjective evaluations show similar trends across different operating systems, with differences arising from the use of different color-enhancing algorithms. Therefore, different algorithms may result in different sizes of the color gamut.
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- 2024
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30. Increased miR-6132 promotes deep vein thrombosis formation by downregulating FOXP3 expression
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Yunhong Zhang, Zhen Zhang, Haoyang Li, Chu Chu, Gang Liang, Nannan Fan, Ran Wei, Tingting Zhang, Lihua Li, Bin Wang, and Xia Li
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deep vein thrombosis ,FOXP3 ,miR-6132 ,immune response ,post-transcriptional regulation ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
BackgroundDeep vein thrombosis (DVT) is associated with aberrant gene expression that is a common peripheral vascular disease. Here, we aimed to elucidate that the epigenetic modification of forkhead box protein 3 (FOXP3) at the post-transcriptional level, which might be the key trigger leading to the down-regulation of FOXP3 expression in DVT.MethodsIn order to explore the relationship between microRNAs (miRNAs) and FOXP3, mRNA and microRNA microarray analysis were performed. Dual luciferase reporter assay was used to verify the upstream miRNAs of FOXP3. Quantitative real-time polymerase chain reaction, flow cytometry and Western blot were used to detect the relative expression of miR-6132 and FOXP3. Additionally, DVT models were established to investigate the role of miR-6132 by Murine Doppler Ultrasound and Hematoxylin-Eosin staining.ResultsMicroarray and flow cytometry results showed that the FOXP3 expression was decreased while miR-6132 level was increased substantially in DVT, and there was significant negative correlation between miR-6132 and FOXP3. Moreover, we discovered that overexpressed miR-6132 reduced FOXP3 expression and aggravated DVT formation, while miR-6132 knockdown increased FOXP3 expression and alleviated DVT formation. Dual luciferase reporter assay validated the direct binding of miR-6132 to FOXP3.ConclusionCollectively, our data elucidate a new avenue through which up-regulated miR-6132 contributes to the formation and progression of DVT by inhibiting FOXP3 expression.
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- 2024
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31. Metabolic Reprogramming by MYCN Confers Dependence on the Serine-Glycine-One-Carbon Biosynthetic Pathway
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Yingfeng Xia, Yajie Yu, Yunhong Zha, Bingwei Ye, Zhi-Chun Ding, Han Fei Ding, Ahmet Alptekin, Oliver Fiehn, Zheng Dong, Muthusamy Thangaraju, Bei Gao, Eun Jeong Park, Chunhong Yan, Jeong Hyeon Choi, Puttur D. Prasad, and Jane Ding
- Subjects
0301 basic medicine ,Cancer Research ,Oncology and Carcinogenesis ,Glycine ,N-Myc Proto-Oncogene Protein ,Article ,Cell Line ,Serine ,03 medical and health sciences ,Neuroblastoma ,0302 clinical medicine ,Rare Diseases ,Ubiquitin ,Clinical Research ,Cell Line, Tumor ,medicine ,Genetics ,Humans ,Oncology & Carcinogenesis ,Child ,neoplasms ,Cancer ,Oncogene Proteins ,Pediatric ,Tumor ,biology ,Chemistry ,Autophagy ,ATF4 ,Neurosciences ,Nuclear Proteins ,medicine.disease ,Carbon ,Cell biology ,Biosynthetic Pathways ,Metabolic pathway ,030104 developmental biology ,Oncology ,5.1 Pharmaceuticals ,030220 oncology & carcinogenesis ,biology.protein ,Development of treatments and therapeutic interventions ,N-Myc - Abstract
MYCN amplification drives the development of neuronal cancers in children and adults. Given the challenge in therapeutically targeting MYCN directly, we searched for MYCN-activated metabolic pathways as potential drug targets. Here we report that neuroblastoma cells with MYCN amplification show increased transcriptional activation of the serine-glycine-one-carbon (SGOC) biosynthetic pathway and an increased dependence on this pathway for supplying glucose-derived carbon for serine and glycine synthesis. Small molecule inhibitors that block this metabolic pathway exhibit selective cytotoxicity to MYCN-amplified cell lines and xenografts by inducing metabolic stress and autophagy. Transcriptional activation of the SGOC pathway in MYCN-amplified cells requires both MYCN and ATF4, which form a positive feedback loop, with MYCN activation of ATF4 mRNA expression and ATF4 stabilization of MYCN protein by antagonizing FBXW7-mediated MYCN ubiquitination. Collectively, these findings suggest a coupled relationship between metabolic reprogramming and increased sensitivity to metabolic stress, which could be exploited as a strategy for selective cancer therapy. Significance: This study identifies a MYCN-dependent metabolic vulnerability and suggests a coupled relationship between metabolic reprogramming and increased sensitivity to metabolic stress, which could be exploited for cancer therapy. See related commentary by Rodriguez Garcia and Arsenian-Henriksson, p. 3818
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- 2019
32. Glycine decarboxylase is a transcriptional target of MYCN required for neuroblastoma cell proliferation and tumorigenicity
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Bingwei Ye, Yunhong Zha, Ahmet Alptekin, Candace J. Poole, Jan van Riggelen, Han Fei Ding, and Yajie Yu
- Subjects
0301 basic medicine ,Cancer Research ,Carcinogenesis ,Glycine ,Glycine cleavage ,Serine-Glycine-One-Carbon metabolism ,Apoptosis ,Biology ,Article ,03 medical and health sciences ,Mice ,Neuroblastoma ,0302 clinical medicine ,Downregulation and upregulation ,RNA interference ,Cell Line, Tumor ,MYCN ,Genetics ,Oncogene MYCN ,medicine ,Biomarkers, Tumor ,Animals ,Humans ,Metabolomics ,Molecular Biology ,neoplasms ,Tetrahydrofolates ,GLDC ,Cell Proliferation ,Regulation of gene expression ,Gene knockdown ,N-Myc Proto-Oncogene Protein ,Cell Cycle Checkpoints ,medicine.disease ,Glycine Dehydrogenase (Decarboxylating) ,Pediatric cancer ,Cancer metabolism ,3. Good health ,Gene Expression Regulation, Neoplastic ,030104 developmental biology ,Cell culture ,Purines ,030220 oncology & carcinogenesis ,Cancer research ,Heterografts - Abstract
Genomic amplification of the oncogene MYCN is a major driver in the development of high-risk neuroblastoma, a pediatric cancer with poor prognosis. Given the challenge in targeting MYCN directly for therapy, we sought to identify MYCN-dependent metabolic vulnerabilities that can be targeted therapeutically. Here, we report that the gene encoding glycine decarboxylase (GLDC), which catalyzes the first and rate-limiting step in glycine breakdown with the production of the one-carbon unit 5,10-methylene-tetrahydrofolate, is a direct transcriptional target of MYCN. As a result, GLDC expression is markedly elevated in MYCN-amplified neuroblastoma tumors and cell lines. This transcriptional upregulation of GLDC expression is of functional significance, as GLDC depletion by RNA interference inhibits the proliferation and tumorigenicity of MYCN-amplified neuroblastoma cell lines by inducing G1 arrest. Metabolomic profiling reveals that GLDC knockdown disrupts purine and central carbon metabolism and reduces citrate production, leading to a decrease in the steady-state levels of cholesterol and fatty acids. Moreover, blocking purine or cholesterol synthesis recapitulates the growth-inhibitory effect of GLDC knockdown. These findings reveal a critical role of GLDC in sustaining the proliferation of neuroblastoma cells with high-level GLDC expression and suggest that MYCN amplification is a biomarker for GLDC-based therapeutic strategies against high-risk neuroblastoma.
- Published
- 2019
33. Controllable arrangement of magnetic skyrmions by strain regulation
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Yunhong Zhao, Lan Shang, Shengbin Shi, Jiajun Sun, and Jie Wang
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Biotechnology ,TP248.13-248.65 ,Physics ,QC1-999 - Abstract
The efficient manipulation of magnetic skyrmions is crucial for the development of future spintronic devices. Here, we demonstrate the controllable arrangement of magnetic skyrmions through strain regulation in the bilayer film system composed of piezoelectric and ferromagnetic layers. The motion characteristics and energy distribution of skyrmions in the ferromagnetic layer under an in-plane periodic strain with a sinusoidal shape are investigated by using a phase-field model. It is found that the final equilibrium location of the skyrmion with the lowest total energy has the maximum positive strain and a zero strain gradient. Furthermore, the periodic strain transforms the disordered multi-skyrmions to an ordered skyrmion array at the desired positions by adjusting the wavelength and amplitude of the strain. Based on the controllability of the skyrmion position, the temperature gradient perpendicular to the strain leads to the directional motion of multi-skyrmions along the desired track. The controllable directional motion of skyrmions by strain regulation proposed in this work is promising for application in the racetrack memory and neuromorphic computing devices.
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- 2024
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34. Research progress on the STAT signaling pathway in pregnancy and pregnancy-associated disorders
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Lihua Li, Zhen Zhang, Haoyang Li, Miaomiao Zhou, Fang Li, Chu Chu, Yunhong Zhang, Xiaoxiao Zhu, Hongmei Ju, and Xia Li
- Subjects
signal transducer and activator of transcription ,pregnancy ,pregnancy-related disorders ,maternal-fetal interface ,maternal-fetal immune tolerance ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Signal transducer and activator of transcription (STAT) proteins, pivotal regulators of signaling cascades, undergo activation in response to the stimulation of cytokines and growth factors, and participate in biological processes, including inflammation, immune responses, cell proliferation, and differentiation. During the process of pregnancy, STAT signaling is involved in regulating embryonic implantation, endometrial decidualization, and establishing and maintaining maternal-fetal immune tolerance. Increasing evidence suggests that aberrant STAT signaling contributes to the occurrence and development of pregnancy disorders, including repeated implantation failure (RIF), preeclampsia (PE), recurrent spontaneous abortion (RSA), preterm birth (PTB) and gestational diabetes mellitus (GDM). Elucidating the molecular mechanisms of the STAT signaling pathway holds promise for further understanding the establishment and maintenance of normal pregnancy, and thereby providing potent targets and strategic avenues for the prevention and management of ailments associated with pregnancy. In this review, we summarized the roles of the STAT signaling pathway and its related regulatory function in embryonic implantation, endometrial decidualization, and maternal-fetal immune tolerance. In conclusion, in-depth research on the mechanism of the STAT signaling pathway not only enhances our understanding of normal pregnancy processes but also offers STAT-based therapeutic approaches to protect women from the burden of pregnancy-related disorders.
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- 2024
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35. Root-associated bacterial microbiome shaped by root selective effects benefits phytostabilization by Athyrium wardii (Hook.)
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Yunhong Zhang, Juan Zhan, Chuang Ma, Wuxing Liu, Huagang Huang, Haiying Yu, Peter Christie, Tingxuan Li, and Longhua Wu
- Subjects
Lead-zinc mine ,Root compartment ,Microbial assembly ,Athyrium wardii ,Phytostabilization ,Environmental pollution ,TD172-193.5 ,Environmental sciences ,GE1-350 - Abstract
The root-associated microbiome assembly substantially promotes (hyper)accumulator plant growth and metal accumulation and is influenced by multiple factors, especially host species and environmental stress. Athyrium wardii (Hook.) is a phytostabilizer that grows in lead (Pb)-zinc (Zn) mine tailings and shows high root Pb accumulation. However, there remains little information on the assembly of the root-associated microbiome of A. wardii and its role in phytostabilization. A field study investigated the structural and functional variation in the root-associated bacterial microbiome of Athyrium wardii (Hook.) exposed to different levels of contamination in Pb-Zn mine tailings. The root compartment dominated the variation in the root-associated bacterial microbiome but the levels of contaminants showed less impact. Bacterial co-occurrence was enhanced in the rhizosphere soil and rhizoplane but tended to be much simpler in the endosphere in terms of network complexity and connectivity. This indicates that the microbial community assembly of A. wardii was non-random and shaped by root selective effects. Proteobacteria, Chloroflexi, Actinobacteria, Cyanobacteria, and Acidobacteriota were generally the dominant bacterial phyla. The genera Crossiella and Bradyrhizobium were enriched in the rhizosphere and cyanobacterial genera were enriched in the endosphere, demonstrating substantial advantages to plant survival and adaptation in the harsh mine environment. Functional categories involved in amino acid and carbohydrate metabolism were abundant in the rhizosphere soil, thus contributing to metal solubility and bioavailability in the rhizosphere. Membrane transporters, especially ATP-binding cassette transporters, were enriched in the endosphere, indicating a potential role in metal tolerance and transportation in A. wardii. The study shows substantial variation in the structure and function of microbiomes colonizing different compartments, with the rhizosphere and endophytic microbiota potentially involved in plant metal tolerance and accumulation during phytostabilization.
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- 2024
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36. KDM4C and ATF4 Cooperate in Transcriptional Control of Amino Acid Metabolism
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Shuang Huang, Erhu Zhao, Jane Ding, Jeong Hyeon Choi, Mengling Liu, Bingwei Ye, Zheng Dong, Yunhong Zha, Chunhong Yan, Yingfeng Xia, Liqun Yang, Han Fei Ding, and Hongjuan Cui
- Subjects
0301 basic medicine ,Jumonji Domain-Containing Histone Demethylases ,Transcription, Genetic ,Lysine ,Activating Transcription Factor 4 ,Biology ,Methylation ,Article ,Gas Chromatography-Mass Spectrometry ,General Biochemistry, Genetics and Molecular Biology ,Histones ,Serine ,03 medical and health sciences ,Cell Line, Tumor ,Transcriptional regulation ,Humans ,RNA, Messenger ,Amino Acids ,RNA, Small Interfering ,Promoter Regions, Genetic ,lcsh:QH301-705.5 ,Phosphoglycerate Dehydrogenase ,Amino acid synthesis ,Homeodomain Proteins ,chemistry.chemical_classification ,Forkhead Box Protein M1 ,Forkhead Transcription Factors ,3. Good health ,Amino acid ,030104 developmental biology ,Histone ,chemistry ,Biochemistry ,lcsh:Biology (General) ,biology.protein ,Demethylase ,RNA Interference ,Cell Division ,HeLa Cells - Abstract
SummaryThe histone lysine demethylase KDM4C is often overexpressed in cancers primarily through gene amplification. The molecular mechanisms of KDM4C action in tumorigenesis are not well defined. Here, we report that KDM4C transcriptionally activates amino acid biosynthesis and transport, leading to a significant increase in intracellular amino acid levels. Examination of the serine-glycine synthesis pathway reveals that KDM4C epigenetically activates the pathway genes under steady-state and serine deprivation conditions by removing the repressive histone modification H3 lysine 9 (H3K9) trimethylation. This action of KDM4C requires ATF4, a transcriptional master regulator of amino acid metabolism and stress responses. KDM4C activates ATF4 transcription and interacts with ATF4 to target serine pathway genes for transcriptional activation. We further present evidence for KDM4C in transcriptional coordination of amino acid metabolism and cell proliferation. These findings suggest a molecular mechanism linking KDM4C-mediated H3K9 demethylation and ATF4-mediated transactivation in reprogramming amino acid metabolism for cancer cell proliferation.
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- 2016
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37. Conserved Disease Modules Extracted From Multilayer Heterogeneous Disease and Gene Networks for Understanding Disease Mechanisms and Predicting Disease Treatments
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Yunhong Zha, Liang Yu, Lin Gao, and Shunyu Yao
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0301 basic medicine ,lcsh:QH426-470 ,Computer science ,Gene regulatory network ,multilayer networks ,Disease ,Computational biology ,drug repositioning ,03 medical and health sciences ,0302 clinical medicine ,disease mechanisms ,Genetics ,KEGG ,Genetics (clinical) ,Network model ,Original Research ,gene networks ,Disease mechanisms ,lcsh:Genetics ,Drug repositioning ,030104 developmental biology ,Drug development ,030220 oncology & carcinogenesis ,Molecular Medicine ,conserved disease modules ,Single layer - Abstract
Disease relationship studies for understanding the pathogenesis of complex diseases, diagnosis, prognosis, and drug development are important. Traditional approaches consider one type of disease data or aggregating multiple types of disease data into a single network, which results in important temporal- or context-related information loss and may distort the actual organization. Therefore, it is necessary to apply multilayer network model to consider multiple types of relationships between diseases and the important interplays between different relationships. Further, modules extracted from multilayer networks are smaller and have more overlap that better capture the actual organization. Here, we constructed a weighted four-layer disease-disease similarity network to characterize the associations at different levels between diseases. Then, a tensor-based computational framework was used to extract Conserved Disease Modules (CDMs) from the four-layer disease network. After filtering, nine significant CDMs were reserved. The statistical significance test proved the significance of the nine CDMs. Comparing with modules got from four single layer networks, CMDs are smaller, better represent the actual relationships, and contain potential disease-disease relationships. KEGG pathways enrichment analysis and literature mining further contributed to confirm that these CDMs are highly reliable. Furthermore, the CDMs can be applied to predict potential drugs for diseases. The molecular docking techniques were used to provide the direct evidence for drugs to treat related disease. Taking Rheumatoid Arthritis (RA) as a case, we found its three potential drugs Carvedilol, Metoprolol, and Ramipril. And many studies have pointed out that Carvedilol and Ramipril have an effect on RA. Overall, the CMDs extracted from multilayer networks provide us with an impressive understanding disease mechanisms from the perspective of multi-layer network and also provide an effective way to predict potential drugs for diseases based on its neighbors in a same CDM.
- Published
- 2018
38. Inhibitory effect of zinc oxide nanorod arrays on breast cancer cells profiled through real‐time cytokines screening by a single‐cell microfluidic platform
- Author
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Ping Li, Chao Wang, Jiaoyan Qiu, Fangteng Song, Yuzhen Huang, Yunhong Zhang, Kai Zhang, Hao Ji, Yuanhua Sang, Jonny J. Blaker, Yu Zhang, and Lin Han
- Subjects
breast cancer ,cell heterogeneity ,microfluidic chips ,single cell ,ZnO NRs ,Biotechnology ,TP248.13-248.65 ,Materials of engineering and construction. Mechanics of materials ,TA401-492 - Abstract
Abstract Zinc oxide nanorods have been extensively studied for the specific killing of breast cancer (BC) cells, and their killing mechanism and anticancer effects have been initially demonstrated. However, systematic studies at the single‐cell level are still necessary to explore cellular functions in detail. In this work, a hydrothermal method was used to synthesize zinc oxide nanorod arrays (ZnO NRs). Their effect on BC cells was demonstrated at single‐cell resolution for the first time through microfluidic chips and a single‐cell analysis platform. The inhibitory effects of ZnO NRs were observed. First, ZnO NRs suppressed cell proliferation and migration abilities. Moreover, Interferon‐γ, Tumor Necrosis Factor‐α, and Granzyme B in BC cells turned out to be antitumor instead of tumorigenic under ZnO NRs stimulation. Furthermore, ZnO NRs inhibition altered cellular functions and thus weakened intercellular and intercluster correlations. More importantly, MDA‐MB‐231 cells (strongly metastatic) showed much greater resistance to ZnO NRs than MCF‐7 cells (nonmetastatic). The experiments complemented the findings at the single‐cell level and provided a more comprehensive consideration of the potential risks and applications of ZnO NRs in breast cancer therapy, which is of great importance for biomedical research on nanomaterials.
- Published
- 2023
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39. Inhibition of the lateral habenular CaMKⅡ abolishes naloxone-precipitated conditioned place aversion in morphine-dependent mice
- Author
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Zicheng Li, Zhi He, Jing Wang, Ping Wang, Min Li, and Yunhong Zha
- Subjects
0301 basic medicine ,Male ,Narcotics ,medicine.medical_specialty ,Narcotic Antagonists ,Conditioning, Classical ,chemistry.chemical_element ,(+)-Naloxone ,Calcium ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Internal medicine ,Ca2+/calmodulin-dependent protein kinase ,1-(5-Isoquinolinesulfonyl)-2-Methylpiperazine ,medicine ,Avoidance Learning ,Animals ,Microinjection ,Conditioned place aversion ,Neurons ,Habenula ,Morphine ,Chemistry ,Naloxone ,General Neuroscience ,Substance Withdrawal Syndrome ,Mice, Inbred C57BL ,030104 developmental biology ,Endocrinology ,Calmodulin-dependent protein kinase II ,cardiovascular system ,Tetrodotoxin ,Calcium-Calmodulin-Dependent Protein Kinase Type 2 ,030217 neurology & neurosurgery ,medicine.drug - Abstract
Addictive substances mediate positive and negative states promoting compulsive drug use. However, substrates for aversive effects of drugs are not fully understood. We found that inactivation of the lateral habenula (LHb) by microinjection of tetrodotoxin (TTX) abolished naloxone-precipitated conditioned place aversion (CPA) in morphine-dependent mice. We also found that lateral habenular administration of KN-62, a specific inhibitor for calcium/calmodulin dependent protein kinase II (CaMKII), abolished naloxone-precipitated CPA in morphine-dependent mice. Furthermore, we found chronic morphine treatment induced overexpression of CaMKII in the LHb. In conclusion, our results suggest that the increased expression of CaMKII in the LHb is instrumental for morphine-driven aversive behaviors.
- Published
- 2017
40. Nomogram for predicting spontaneous pregnancy after microscopic varicocelectomy in infertile men with normal hormone
- Author
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Lina Liu, Jia Li, Gang Liu, Chunyu Pan, Song Bai, Yunhong Zhan, and Liping Shan
- Subjects
Varicocele ,Varicocelectomy ,Spontaneous pregnancy ,Nomogram ,Predictor ,Gynecology and obstetrics ,RG1-991 - Abstract
Abstract Introduction The current challenge for the treatment of varicocele is identifying patients who could benefit the most from surgery. We aimed to develop and validate a nomogram for predicting spontaneous pregnancy following microscopic varicocelectomy in infertile men, based on a large cohort. Methods Two hundred eighty-two consecutive patients who underwent microscopic varicocelectomy from January 2018 to December 2020 were enrolled as participants in the study. Xiang Hua center (206 patients) as a development cohort. Hu Nan center (76 patients) as a validation cohort. Patient clinicopathologic data were recorded. Multivariate logistic regression was used to build a predictive model with regression coefficients. Then, backward stepwise selection was applied, and the likelihood ratio test with Akaike’s information criterion was used as the stopping rule. The performance of this predictive model was assessed for discrimination, calibration, and clinical usefulness. Results Predictors of this model included the age of female partners, diameter of veins, initial and increased total progressively motile sperm count. The model demonstrated good discrimination with an AUROC of 0.925 (p
- Published
- 2022
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41. Corrigendum: Long non-coding RNA CCAT1 acts as an oncogene and promotes sunitinib resistance in renal cell carcinoma
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Liping Shan, Wei Liu, and Yunhong Zhan
- Subjects
CCAT1 ,renal cell carcinoma ,sunitinib ,resistance ,apoptosis ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2023
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42. Early long-term low-dosage colchicine and major adverse cardiovascular events in patients with acute myocardial infarction: a systematic review and meta-analysis
- Author
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Yifang Zhou, Yidan Liu, Ruixiang Zeng, Wenjie Qiu, Yunhong Zhao, and Yuanshen Zhou
- Subjects
colchicine ,myocardial infarction ,major adverse cardiovascular events ,CRP ,inflammation ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
BackgroundCurrent evidence on the efficacy and safety of colchicine after acute myocardial infarction (AMI) remains controversial. This study aims to clarify early low-dose long-term colchicine's exact efficacy and safety in AMI patients via more studies.MethodsWe searched PubMed, Web of Science, Embase, and Cochrane Library databases for randomized controlled trials assessing the efficacy of colchicine on major adverse cardiovascular events (MACE) in recent AMI patients from inception to January 29, 2023, without any restriction. Additionally, we conducted subgroup analyses to assess the impact of early (≤3 days) long-term (≥1 year) low-dosage (0.5 mg/d) colchicine. Summary estimates were computed using Mantel-Haenszel and reported as risk ratios (RRs) or standard mean differences (SMDs), mean differences (MDs) with 95% confidence intervals (CIs). Sensitivity analyses were performed to explore the potential sources of heterogeneity. Review Manager software was used for the meta-analysis.ResultsEight studies identified from 564 screened records were analyzed, with 5,872 patients after AMI. The length of follow-up varied from five days to 22.7 months, and 0.5–1.0 mg colchicine was administered daily. In summary, compared to the control group, colchicine reduced the occurrence of MACE (RR, 0.56; 95% CI, 0.48–0.67) with 2.99-fold gastrointestinal adverse events in patients with recent AMI. Moreover, the relation referred to a gradual decrease in the occurrence of MACE with a longer follow-up duration (≥1 year) and lower dosage (0.5 mg/d) without leading more gastrointestinal adverse events. Colchicine decreased the follow-up levels of C-reactive protein (CRP) (MD −0.66, 95% CI, −0.98– −0.35) and neutrophils (SMD −0.22, 95% CI, −0.39– −0.55) when the follow-up period was 30 days.ConclusionEarly long-term low-dose colchicine decreases the risk of MACE via anti-inflammation without leading more gastrointestinal adverse events in patients with AMI.
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- 2023
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43. Endocannabinoid 2-Arachidonoylglycerol Suppresses LPS-Induced Inhibition of A-Type Potassium Channel Currents in Caudate Nucleus Neurons Through CB1 Receptor
- Author
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Yongli Lu, Ziliang Zou, Yunhong Zha, and Hongwei Yang
- Subjects
0301 basic medicine ,Lipopolysaccharides ,Cannabinoid receptor ,2-Arachidonoylglycerol ,Action Potentials ,Arachidonic Acids ,Neuroprotection ,Glycerides ,Rats, Sprague-Dawley ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,chemistry.chemical_compound ,0302 clinical medicine ,Receptor, Cannabinoid, CB1 ,medicine ,Animals ,Patch clamp ,Cells, Cultured ,Cannabinoid Receptor Agonists ,Neurons ,Chemistry ,Neurotoxicity ,General Medicine ,medicine.disease ,Endocannabinoid system ,Potassium channel ,Monoacylglycerol Lipases ,Cell biology ,Rats ,030104 developmental biology ,medicine.anatomical_structure ,Potassium Channels, Voltage-Gated ,Caudate Nucleus ,Nucleus ,Neuroscience ,030217 neurology & neurosurgery ,Endocannabinoids - Abstract
Inflammation plays a pivotal role in the pathogenesis of many diseases in the central nervous system. Caudate nucleus (CN), the largest nucleus in the brain, is also implicated in many neurological disorders. 2-Arachidonoylglycerol (2-AG), the most abundant endogenous cannabinoid, has been shown to exhibit neuroprotective effects through its anti-inflammatory action from some proinflammatory stimuli. However, the neuroprotective mechanism of 2-AG is complex and has not been fully understood. A-type K(+) channels critically regulate neuronal excitability and have been demonstrated to be associated with some nervous system diseases. The aim of this study was to explore whether A-type K(+) channels were involved in neurotoxicity of lipopolysaccharides (LPS) and the neuroprotective mechanism of 2-AG in CN neurons. Whole cell patch clamp recording was used to investigate the influence of LPS on the function of A-type K(+) channels and its modulation by 2-AG in primary cultured rat CN neurons. Our findings showed that in cultured CN neurons, LPS significantly decreased the A-type potassium currents (I A) in a voltage-insensitive way. The further data demonstrated that an elevation of 2-AG levels by directly applying exogenous 2-AG or inhibiting monoacylglycerol lipase (MAGL) to prevent 2-AG hydrolysis was capable of suppressing the LPS-induced inhibition of IA and the action of 2-AG is mediated through CB1 receptor-dependant way. The study provides a better understanding of inflammation-related neurological disorders and suggests the therapeutic potential for 2-AG for the treatment of these diseases.
- Published
- 2016
44. Cyclin E1 is a common target of BMI1 and MYCN and a prognostic marker for neuroblastoma progression
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Hongjuan Cui, Ling Mao, Jane Ding, Han Fei Ding, Aja Perdue, Yunhong Zha, Shuang Huang, Mingqiang Ren, and Liqun Yang
- Subjects
Cancer Research ,F-Box-WD Repeat-Containing Protein 7 ,Cyclin D ,Ubiquitin-Protein Ligases ,Cyclin A ,Cyclin B ,Cell Cycle Proteins ,macromolecular substances ,Article ,03 medical and health sciences ,Neuroblastoma ,0302 clinical medicine ,FBXW7, MYCN ,Cell Line, Tumor ,Proto-Oncogene Proteins ,Cyclin E ,Tumor Suppressor Protein p14ARF ,Genetics ,medicine ,Biomarkers, Tumor ,cyclin E1 ,Humans ,Molecular Biology ,neoplasms ,Cyclin-Dependent Kinase Inhibitor p16 ,030304 developmental biology ,Oncogene Proteins ,Polycomb Repressive Complex 1 ,0303 health sciences ,Gene knockdown ,N-Myc Proto-Oncogene Protein ,biology ,F-Box Proteins ,Nuclear Proteins ,medicine.disease ,Prognosis ,BMI1 ,3. Good health ,Ubiquitin ligase ,Neoplasm Proteins ,Repressor Proteins ,Cyclin E1 ,030220 oncology & carcinogenesis ,biology.protein ,Cancer research ,Disease Progression ,Cyclin A2 - Abstract
The Polycomb transcription repressor BMI1 is highly expressed in human neuroblastomas and is required for the clonogenic self-renewal and tumorigenicity of human neuroblastoma cell lines. The molecular basis of BMI1 action in neuroblastoma cells is not well understood. Here we report that BMI1 has a critical role in stabilizing cyclin E1 by repressing the expression of FBXW7, a substrate-recognition subunit of the SCF E3 ubiquitin ligase that targets cyclin E1 for degradation. BMI1 binds to the FBXW7 locus in vivo and represses its mRNA expression. Overexpression of cyclin E1 or abrogation of FBXW7 induction rescues the cell-death phenotype of BMI1 knockdown. Moreover, MYCN, an oncoprotein in the pathogenesis of high-risk neuroblastomas, is able to counteract the death-inducing effect of BMI1 knockdown by activating CCNE1 transcription. We further show that high cyclin E1 expression is associated with Stage 4 neuroblastomas and poor prognosis in patients. These findings suggest a molecular mechanism for the oncogenic activity of BMI1 and MYCN in neuroblastoma pathogenesis and progression by maintaining cyclin E1 levels.
- Published
- 2011
45. HOXC9 Links Cell-Cycle Exit and Neuronal Differentiation and Is a Prognostic Marker in Neuroblastoma
- Author
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Jane Ding, Hongjuan Cui, Han Fei Ding, Liqun Yang, Yunhong Zha, Brian A. McCarthy, William P. King, and Ling Mao
- Subjects
Cancer Research ,Cellular differentiation ,Cell ,Retinoic acid ,Tretinoin ,Biology ,Article ,Epigenesis, Genetic ,Neuroblastoma ,chemistry.chemical_compound ,Cell Line, Tumor ,medicine ,Humans ,Epigenetics ,Promoter Regions, Genetic ,neoplasms ,Cell Proliferation ,Homeodomain Proteins ,Neurons ,Gene knockdown ,Cell growth ,G1 Phase ,Cell Differentiation ,Cell cycle ,Prognosis ,medicine.disease ,Molecular biology ,medicine.anatomical_structure ,Oncology ,chemistry ,Cancer research - Abstract
Differentiation status in neuroblastoma strongly affects clinical outcomes and inducing differentiation is a treatment strategy in this disease. However, the molecular mechanisms that control neuroblastoma differentiation are not well understood. Here, we show that high-level HOXC9 expression is associated with neuroblastoma differentiation and is prognostic for better survival in neuroblastoma patients. HOXC9 induces growth arrest and neuronal differentiation in neuroblastoma cells by directly targeting both cell-cycle–promoting and neuronal differentiation genes. HOXC9 expression is upregulated by retinoic acid (RA), and knockdown of HOXC9 expression confers resistance to RA-induced growth arrest and differentiation. Moreover, HOXC9 expression is epigenetically silenced in RA-resistant neuroblastoma cells, and forced HOXC9 expression is sufficient to inhibit their proliferation and tumorigenecity. These findings identified HOXC9 as a key regulator of neuroblastoma differentiation and suggested a therapeutic strategy for RA-resistant neuroblastomas through epigenetic activation of HOXC9 expression. Cancer Res; 71(12); 4314–24. ©2011 AACR.
- Published
- 2011
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46. All-Polarization Maintaining Noise-Like Pulse From Mode-Locked Thulium-Doped Fiber Laser Based on Nonlinear Loop Mirror
- Author
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Yunhong Zhang, Yi Zheng, Xinyang Su, Jiying Peng, Haiyang Yu, Tianran Sun, and Huaiwei Zhang
- Subjects
All-polarization maintaining ,noise-like pulse ,nonlinear optical loop mirror ,mode-locked thulium-doped fiber laser ,Applied optics. Photonics ,TA1501-1820 ,Optics. Light ,QC350-467 - Abstract
In this paper, we present a figure-eight all-polarization maintaining thulium-doped mode-locked fiber laser based on a nonlinear optical loop mirror operating at noise-like pulse regimes. The total cavity length is 34.5 m, and the calculated net group delay dispersion is estimated to be ∼−2.616 ps2. At the maximum pump power, stable noise-like pulse centered at 1943 nm with a spectral full width at half maximum of 32 nm, a pulse energy of 13.51 nJ, and a coherence spike width of 236 fs is generated at a repetition rate of 5.96 MHz with the signal-to-noise ratio ∼64 dB. The polarization extinction ratio is > 15 dB at any mode-locking operation. The slope efficiency and the output power fluctuation of the laser are 5.16% and 0.039%, respectively. The laser does not require polarization state controllers, and it holds very high stability, which is insensitive to temperature changes or mechanical vibrations. Through further amplification, it will be a good laser source for real-time interrogation of fiber Bragg gratings and supercontinuum generation.
- Published
- 2022
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47. Dopamine inhibits excitatory neurotransmission in basolateral amygdala during development via pre-synaptic mechanism
- Author
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Ping, Wang, Ming, Fang, Yunhong, Zha, Jianping, Lai, and Zicheng, Li
- Subjects
Male ,Basolateral Nuclear Complex ,Dopamine ,Dopaminergic Neurons ,Pyramidal Cells ,Dopamine Agents ,Presynaptic Terminals ,Excitatory Postsynaptic Potentials ,Synaptic Transmission ,Rats, Sprague-Dawley ,Organ Culture Techniques ,Animals ,Dopamine Antagonists ,Signal Transduction - Abstract
Dopaminergic signaling in the basolateral amygdala (BLA) is important for emotion-related activity. However, little is known about the influence of dopamine (DA) on excitatory synaptic transmission of pyramidal neurons in BLA at early developmental stage. Here in this study, we observed the effect of DA on excitatory neurotransmission in the pyramidal cells of BLA in acute slices.Acute slices from amygdala of rats at the age of 14-16 days were prepared and maintained in vitro using standard method. Whole-cell patch clamp recordings were performed to examine the evoked excitatory postsynaptic current (eEPSC), spontaneous excitatory postsynaptic current (sEPSC) and miniature excitatory postsynaptic current (mEPSC). Drugs including DA and synaptic blockers were added in recording solution due to different experimental designs.We found that bath application of DA at a concentration of 100 μM significantly inhibited the amplitude of evoked EPSC. However, the amplitude and frequency of mEPSC were not affected. We also found increased pair pulse facilitation after DA application, indicating DA inhibited excitatory neurotransmission through suppression of release probability at the pre-synaptic terminals. Importantly, DA was also effective in decreasing activity induced upregulation in sEPSCs. Moreover, the DA effects were not affected by either antagonist of dopamine 1 or dopamine 2-like receptors.We studied the effects of DA on excitatory neurotransmission and found that DA inhibited glutamatergic synaptic transmission via modulation of pre-synaptic release probability.
- Published
- 2014
48. Endocannabinoid 2-arachidonylglycerol protects primary cultured neurons against homocysteine-induced impairments in rat caudate nucleus through CB1 receptor
- Author
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Yunhong Zha, Yongli Lu, Manman Dong, and Hongwei Yang
- Subjects
medicine.medical_specialty ,Cannabinoid receptor ,MAP Kinase Signaling System ,medicine.medical_treatment ,2-Arachidonoylglycerol ,Caudate nucleus ,Arachidonic Acids ,Biology ,Neuroprotection ,Glycerides ,Rats, Sprague-Dawley ,Cellular and Molecular Neuroscience ,chemistry.chemical_compound ,Receptor, Cannabinoid, CB1 ,Internal medicine ,Basal ganglia ,medicine ,Animals ,Receptor ,Homocysteine ,Cells, Cultured ,Cannabinoid Receptor Agonists ,Neurons ,NF-kappa B ,General Medicine ,Endocannabinoid system ,Rats ,Endocrinology ,Neuroprotective Agents ,chemistry ,Cyclooxygenase 2 ,Cannabinoid ,Caudate Nucleus ,Neuroscience ,Endocannabinoids - Abstract
Homocysteine (Hcy) is a high risk factor for Alzheimer’s disease (AD). Caudate nucleus (CN), the major component of basal ganglia in the brain, is also involved in many neurological disorders. 2-Arachidonoylglycerol (2-AG), the true natural ligand for cannabinoid type-1 (CB1) receptors and the most abundant endogenous cannabinoid, has been shown to exhibit neuroprotective effects through its anti-inflammatory action from proinflammatory stimuli in the hippocampus and CN. However, it is still not well understood whether that 2-AG is also able to protect CN neurons from Hcy harmful insults. In the present work, we explored that 2-AG significantly protects CN neurons in culture against Hcy-induced response. 2-AG is capable of inhibiting elevation of Hcy-induced cyclooxygenase-2 expression associated with nuclear factor-kappaB/p38MAPK/ERK1/2 signaling pathway through CB1 receptors-dependent way in primary cultured CN neurons. Our study reveals the therapeutic potential for 2-AG for the treatment of neurodegenerative diseases, such as AD.
- Published
- 2014
49. Maternal positive coparenting and adolescent peer attachment: Chain intermediary role of parental involvement and parent–child attachment
- Author
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Wanghua Ji, Yang Yang, Ying Han, Xiaohua Bian, Yunhong Zhang, and Junqi Liu
- Subjects
maternal positive coparenting ,parental involvement ,parent–child attachment ,peer attachment ,adolescents ,Psychology ,BF1-990 - Abstract
This study investigated the relationship between maternal positive coparenting and adolescent peer attachment, and the intermediary role of parental involvement and parent–child attachment in 1,807 families using the maternal positive coparenting scale, the parental involvement scale, and the parent and peer attachment scale. The results showed that maternal positive coparenting behaviour, parental involvement, parent–child attachment, and peer attachment had significant positive relationships, and maternal positive coparenting had a positive correlation with adolescent peer attachment. Moreover, parental involvement and parent–child attachment played a significant mediating role between maternal positive coparenting behavior, including unity and consistent behavior, and adolescent peer attachment, respectively, which consisted of a sole intermediary role of parental involvement; a single intermediary role of parent–children attachment; and a chain intermediary role of parental involvement and parent–children attachment. Hence, maternal positive coparenting was positively associated with adolescent peer attachment, in which parental involvement and parent-child attachment served as a crucial bridge.
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- 2022
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50. Immune status for monitoring and treatment of bladder cancer
- Author
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Shen Pan, Shijie Li, Yunhong Zhan, Xiaonan Chen, Ming Sun, Xuefeng Liu, Bin Wu, Zhenhua Li, and Bitian Liu
- Subjects
bladder cancer ,BCG ,immunotherapy ,immune cells ,type 2 immunity ,Immunologic diseases. Allergy ,RC581-607 - Abstract
The high recurrence rate of non-muscle invasive bladder cancer (BC) and poor prognosis of advanced BC are therapeutic challenges that need to be solved. Bacillus Calmette-Guerin (BCG) perfusion was the pioneer immunotherapy for early BC, and the discovery of immune checkpoint inhibitors has created a new chapter in the treatment of advanced BC. The benefit of immunotherapy is highly anticipated, but its effectiveness still needs to be improved. In this review, we collated and analysed the currently available information and explored the mechaisms by which the internal immune imbalance of BC leads to tumour progression. The relationship between immunity and progression and the prognosis of BC has been explored through tests using body fluids such as blood and urine. These analytical tests have attempted to identify specific immuyne cells and cytokines to predict treatment outcomes and recurrence. The diversity and proportion of immune and matrix cells in BC determine the heterogeneity and immune status of tumours. The role and classification of immune cells have also been redefined, e.g., CD4 cells having recognised cytotoxicity in BC. Type 2 immunity, including that mediated by M2 macrophages, Th2 cells, and interleukin (IL)-13, plays an important role in the recurrence and progression of BC. Pathological fibrosis, activated by type 2 immunity and cancer cells, enhances the rate of cancer progression and irreversibility. Elucidating the immune status of BC and clarifying the mechanisms of action of different cells in the tumour microenvironment is the research direction to be explored in the future.
- Published
- 2022
- Full Text
- View/download PDF
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