102 results on '"Yun-Kyoung Kim"'
Search Results
2. Development of a Microneedle Swab for Acquisition of Genomic DNA From Buccal Cells
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Yun-Seo Kim, JeongHyeon Kim, Woonsung Na, Gil-Hwan Sung, Seung-Ki Baek, Yun Kyoung Kim, Gyeong Ryeong Kim, Hae-Jin Hu, and Jung-Hwan Park
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microneedles ,swab ,DNA yield ,buccal mucosa ,DNA purity ,Biotechnology ,TP248.13-248.65 - Abstract
A swab is a tool for obtaining buccal DNA from buccal mucus for biological analysis. The acquisition of a sufficient amount and high quality of DNA is an important factor in determining the accuracy of a diagnosis. A microneedle swab (MN swab) was developed to obtain more oral mucosal tissues non-invasively. Eight types of MN swabs were prepared with varying combinations of patterns (zigzag or straight), number of MNs, intervals of MNs, and sharpness of tips. When MN swab was applied up to 10 times, the tissue amount and DNA yield increased compared to commercial swabs. A zigzag pattern of microneedles was found to be more efficient than a straight pattern and increasing the number of microneedles in an array increased the DNA yield. The MN swab collected about twice the DNA compared to the commercial swab. In an in vivo test using mini pigs, the lower cycle threshold values of mucosal samples collected with MN swabs compared to samples collected with commercial swabs indicated that a greater amount of DNA was collected for SNP genotyping. A polymer MN swab is easy to manufacture by a single molding process, and it has a greater sampling capacity than existing commercial swabs.
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- 2022
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3. Programmable Nuclease-Based Integration into Novel Extragenic Genomic Safe Harbor Identified from Korean Population-Based CNV Analysis
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Eun-Seo Lee, Sanghoon Moon, Kwaku Dad Abu-Bonsrah, Yun Kyoung Kim, Mi Yeong Hwang, Young Jin Kim, Seokjoong Kim, Nathaniel S. Hwang, Hyongbum Henry Kim, and Bong-Jo Kim
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Here, we found two genomic safe harbor (GSH) candidates from chromosomes 3 and 8, based on large-scale population-based cohort data from 4,694 Koreans by CNV analysis. Furthermore, estimated genotype of these CNVRs was validated by quantitative real-time PCR, and epidemiological data examined no significant genetic association between diseases or traits and two CNVRs. After screening the GSH candidates by in silico approaches, we designed TALEN pairs to integrate EGFP expression cassette into human cell lines in order to confirm the functionality of GSH candidates in an in vitro setting. As a result, transgene insertion into one of the two loci using TALEN showed robust transgene expression comparable to that with an AAVS1 site without significantly perturbing neighboring genes. Changing the promoter or cell type did not noticeably disturb this trend. Thus, we could validate two CNVRs as a site for effective and safe transgene insertion in human cells. Keywords: genome editing, TALEN, safe harbor, copy number variation region
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- 2019
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4. Dual Stimuli-Triggered Nanogels in Response to Temperature and pH Changes for Controlled Drug Release
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Yun Kyoung Kim, Eun-Joong Kim, Jae Hyun Lim, Heui Kyoung Cho, Woo Jin Hong, Hyang Hwa Jeon, and Bong Geun Chung
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PNIPAM ,LCST ,Controlled drug release ,Temperature ,pH ,Materials of engineering and construction. Mechanics of materials ,TA401-492 - Abstract
Abstract Poly-N-isopropyl acrylamide (PNIPAM) nanogels have been modified with different acrylic acid (AAc) contents for the efficient control of lower critical solution temperature (LCST). In this study, PNIPAM-co-AAc nanogels nanogels showed two volume phase transitions in comparison with PNIPAM. The transition temperature of PNIPAM nanogels was increased with AAc contents. The controlled drug release performance of PNIPAM-co-AAc nanogels loaded with β-lapachone was attributed to the AAc content ratio and was efficiently triggered in response to temperature and pH. Moreover, a colorimetric cell proliferation assay and direct fluorescence-based live/dead staining were used to confirm the concurrence on drug release profiles. Finally, PNIPAM-co-AAc20 showed a relatively low level of drug release in the range of acidic to neutral pH at body temperature, while maximizing drug release at basic pH. Therefore, we demonstrated that the PNIPAM-based nanogel with the temperature- and pH-responsive features could be a promising nanocarrier for potential intestine-specific drug delivery.
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- 2019
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5. An Empirical Analysis of the Effects of the Artist Welfare System on the Economic and Artistic Activities of Artists: Based on the 2021 Artist Survey
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Jina Kang and Yun Kyoung Kim
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Psychiatry and Mental health ,Neuropsychology and Physiological Psychology ,Health Policy - Published
- 2023
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6. Impacts of network coding on end-to-end packet transport performance.
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Yun Kyoung Kim, Jeong Gun Kim, Kyoung Yong Park, and Tae Wan Kim
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- 2015
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7. Latent Profile Analysis of Figural Creativity: Effects of Creative School Environment and Differences in Peer Relations
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Yun-Kyoung Kim
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- 2021
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8. Predictors of employees’ strike attitudes in multinational corporations in China: a multilevel relational model
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Ying Chen, Yun-Kyoung Kim, Zhiqiang Liu, and Guofeng Wang
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Organizational Behavior and Human Resource Management ,Management of Technology and Innovation ,Strategy and Management ,Industrial relations ,Business and International Management - Published
- 2021
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9. An Action Study on Digital Storytelling of Folklore
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Yun Kyoung Kim
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General Medicine - Published
- 2021
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10. Effects of Children's Playfulness on Creative Thinking Moderated by Conformity Disposition and Task Interest
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Yun-Kyoung Kim
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media_common.quotation_subject ,Disposition ,Creative thinking ,Psychology ,Conformity ,media_common ,Cognitive psychology ,Task (project management) - Published
- 2021
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11. A Study on the Factors Influencing the Innovation of Municipal Choir in South Korea
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Sam Youl Lee, Jina Kang, and Yun Kyoung Kim
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Political science ,Choir ,Socioeconomics - Published
- 2021
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12. Genome-Wide Association Study Identifies Candidate Loci Associated with Platelet Count in Koreans
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Ji Hee Oh, Yun Kyoung Kim, Sanghoon Moon, Young Jin Kim, and Bong-Jo Kim
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genome-wide association study ,Korea ,platelet count ,Genetics ,QH426-470 - Abstract
Platelets are derived from the fragments that are formed from the cytoplasm of bone marrow megakaryocytes-small irregularly shaped anuclear cells. Platelets respond to vascular damage, contracts blood vessels, and attaches to the damaged region, thereby stopping bleeding, together with the action of blood coagulation factors. Platelet activation is known to affect genes associated with vascular risk factors, as well as with arteriosclerosis and myocardial infarction. Here, we performed a genome-wide association study with 352,228 single-nucleotide polymorphisms typed in 8,842 subjects of the Korea Association Resource (KARE) project and replicated the results in 7,861 subjects from an independent population. We identified genetic associations between platelet count and common variants nearby chromosome 4p16.1 (p = 1.46 × 10-10, in the KIAA0232 gene), 6p21 (p = 1.36 × 10-7, in the BAK1 gene), and 12q24.12 (p = 1.11 × 10-15, in the SH2B3 gene). Our results illustrate the value of large-scale discovery and a focus for several novel research avenues.
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- 2014
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13. A Study on Enjoyment Methods of Traditional Poetry in The Phono Sapiens Era - Focusing on [Tiger is Coming] of the Korea Tourism Organization
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Yun-kyoung Kim
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History ,Poetry ,Aesthetics ,Tiger ,Tourism - Published
- 2021
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14. Real-Time Step-Count Detection and Activity Monitoring Using A Triaxial Accelerometer.
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Yun Kyoung Kim, Sung-Mok Kim, Hyung Suk Lho, and We-Duke Cho
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- 2012
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15. Gifted students’ perceptions about leadership and leadership development
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Michael S. Matthews, Eunjoo Boo, Yun-Kyoung Kim, and Seon-Young Lee
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Leadership development ,Perception ,media_common.quotation_subject ,05 social sciences ,Pedagogy ,050301 education ,0501 psychology and cognitive sciences ,Psychology ,0503 education ,050105 experimental psychology ,Education ,media_common - Abstract
Although leadership is widely considered an aspect of giftedness, few studies have examined gifted students’ beliefs regarding their own leadership abilities and their potential to become leaders. ...
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- 2020
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16. Job insecurity and subjective sleep quality: The role of spillover and gender
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Yun-Kyoung Kim, Sunjin Pak, and Amit Kramer
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Psychiatry and Mental health ,Clinical Psychology ,Spillover effect ,Job insecurity ,Subjective sleep ,media_common.quotation_subject ,Demographic economics ,Quality (business) ,General Medicine ,Psychology ,Applied Psychology ,media_common - Published
- 2020
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17. DISCRIMINATION AGAINST ASIAN IMMIGRANTS TO THE US: QUALITY OF THE FIRST ORGANIZATIONAL PLACEMENT.
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KRAMER, AMIT, KWON HEE HAN, YUN KYOUNG KIM, and KRAMER, KAREN Z.
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- 2023
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18. Association of Metabolites with Obesity and Type 2 Diabetes Based on FTO Genotype.
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Yeon-Jung Kim, Heun-Sik Lee, Yun Kyoung Kim, Suyeon Park, Jeong-Min Kim, Jun Ho Yun, Ho-Yeong Yu, and Bong-Jo Kim
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Medicine ,Science - Abstract
The single nucleotide polymorphism rs9939609 of the gene FTO, which encodes fat mass and obesity-associated protein, is strongly associated with obesity and type 2 diabetes (T2D) in multiple populations; however, the underlying mechanism of this association is unclear. The present study aimed to investigate FTO genotype-dependent metabolic changes in obesity and T2D. To elucidate metabolic dysregulation associated with disease risk genotype, genomic and metabolomic datasets were recruited from 2,577 participants of the Korean Association REsource (KARE) cohort, including 40 homozygous carriers of the FTO risk allele (AA), 570 heterozygous carriers (AT), and 1,967 participants carrying no risk allele (TT). A total of 134 serum metabolites were quantified using a targeted metabolomics approach. Through comparison of various statistical methods, seven metabolites were identified that are significantly altered in obesity and T2D based on the FTO risk allele (adjusted p < 0.05). These identified metabolites are relevant to phosphatidylcholine metabolic pathway, and previously reported to be metabolic markers of obesity and T2D. In conclusion, using metabolomics with the information from genome-wide association studies revealed significantly altered metabolites depending on the FTO genotype in complex disorders. This study may contribute to a better understanding of the biological mechanisms linking obesity and T2D.
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- 2016
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19. My IQ is 37,829 : A Discursive Identity Inquiry of Adolescents in Everyday Talk
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Yun-kyoung Kim
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Discourse analysis ,Identity (social science) ,Gender studies ,Sociology - Published
- 2019
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20. Programmable Nuclease-Based Integration into Novel Extragenic Genomic Safe Harbor Identified from Korean Population-Based CNV Analysis
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Bong-Jo Kim, Hyongbum Kim, Seokjoong Kim, Mi Yeong Hwang, Young-Jin Kim, Yun Kyoung Kim, Kwaku Dad Abu-Bonsrah, Eun-Seo Lee, Nathaniel S. Hwang, and Sanghoon Moon
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0301 basic medicine ,Cancer Research ,Transgene ,In silico ,Population ,Biology ,lcsh:RC254-282 ,Article ,03 medical and health sciences ,0302 clinical medicine ,TALEN ,Genotype ,copy number variation region ,genome editing ,Pharmacology (medical) ,education ,Gene ,Genetic association ,Genetics ,Transcription activator-like effector nuclease ,education.field_of_study ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,Molecular Medicine ,Expression cassette ,safe harbor - Abstract
Here, we found two genomic safe harbor (GSH) candidates from chromosomes 3 and 8, based on large-scale population-based cohort data from 4,694 Koreans by CNV analysis. Furthermore, estimated genotype of these CNVRs was validated by quantitative real-time PCR, and epidemiological data examined no significant genetic association between diseases or traits and two CNVRs. After screening the GSH candidates by in silico approaches, we designed TALEN pairs to integrate EGFP expression cassette into human cell lines in order to confirm the functionality of GSH candidates in an in vitro setting. As a result, transgene insertion into one of the two loci using TALEN showed robust transgene expression comparable to that with an AAVS1 site without significantly perturbing neighboring genes. Changing the promoter or cell type did not noticeably disturb this trend. Thus, we could validate two CNVRs as a site for effective and safe transgene insertion in human cells. Keywords: genome editing, TALEN, safe harbor, copy number variation region
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- 2019
21. Leadership Development of Gifted Adolescents from a Korean Multicultural Lens
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Eunjoo Boo, Yun-Kyoung Kim, and Seon-Young Lee
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Gifted Adolescents ,Leadership development ,Multiculturalism ,media_common.quotation_subject ,Pedagogy ,Lens (geology) ,Psychology ,media_common - Published
- 2021
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22. Association of the PHACTR1/EDN1 Genetic Locus With Spontaneous Coronary Artery Dissection
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David Adlam, Timothy M. Olson, Nicolas Combaret, Jason C. Kovacic, Siiri E. Iismaa, Abtehale Al-Hussaini, Megan M. O'Byrne, Sara Bouajila, Adrien Georges, Ketan Mishra, Peter S. Braund, Valentina d’Escamard, Siying Huang, Marios Margaritis, Christopher P. Nelson, Mariza de Andrade, Daniella Kadian-Dodov, Catherine A. Welch, Stephani Mazurkiewicz, Xavier Jeunemaitre, Claire Mei Yi Wong, Eleni Giannoulatou, Michael Sweeting, David Muller, Alice Wood, Lucy McGrath-Cadell, Diane Fatkin, Sally L. Dunwoodie, Richard Harvey, Cameron Holloway, Jean-Philippe Empana, Xavier Jouven, Jeffrey W. Olin, Rajiv Gulati, Marysia S. Tweet, Sharonne N. Hayes, Nilesh J. Samani, Robert M. Graham, Pascal Motreff, Nabila Bouatia-Naji, Loïc Belle, Patrick Dupouy, Pierre Barnay, Nicolas Meneveau, Martine Gilard, Gilles Rioufol, Grégoire Range, Philippe Brunel, Nicolas Delarche, Emmanuelle Filippi, Louis Le Bivic, Brahim Harbaoui, Hakim Benamer, Guillaume Cayla, Olivier Varenne, Stephane Peggy Manzo-Silberman, Johanne Silvain, Christian Spaulding, Christophe Caussin, Edouard Gerbaud, Yann Valy, René Koning, Thibault Lhermusier, Stanislas Champin, Emmanuel Salengro, Arnaud Fluttaz, Amer Zabalawi, Yves Cottin, Emmanuel Teiger, Christophe Saint-Etienne, Grégory Ducrocq, Stéphanie Marliere, Emmanuel Boiffard, Pierre Aubry, Jean Louis Georges, Didier Bresson, Fabien De Poli, Gaëtan Karrillon, Vincent Roule, Laurent Bali, Mathieu Valla, Antoine Gerbay, David Houpe, Olivier Dubreuil, Arsène Monnier, Norbert Mayaud, Aurélie Manchuelle, Philippe Commeau, Marc Bedossa, Majid Nikpay, Anuj Goel, Hong-Hee Won, Leanne M. Hall, Christina Willenborg, Stavroula Kanoni, Danish Saleheen, Theodosios Kyriakou, Jemma C. Hopewell, Thomas R. Webb, Lingyao Zeng, Abbas Dehghan, Maris Alver, Sebastian M. Armasu, Kirsi Auro, Andrew Bjonnes, Daniel I. Chasman, Shufeng Chen, Ian Ford, Nora Franceschini, Christian Gieger, Christopher Grace, Stefan Gustafsson, Jie Huang, Shih-Jen Hwang, Yun Kyoung Kim, Marcus E. Kleber, King Wai Lau, Xiangfeng Lu, Yingchang Lu, Leo P. Lyytikäinen, Evelin Mihailov, Alanna Morrison, Natalia Pervjakova, Liming Qu, Lynda M. Rose, Elias Salfati, Richa Saxena, Markus Scholz, Albert V. Smith, Emmi Tikkanen, Andre Uitterlinden, Xueli Yang, Weihua Zhang, Wei Zhao, Paul S. de Vries, Natalie R. van Zuydam, Sonia S. Anand, Lars Bertram, Frank Beutner, George Dedoussis, Philippe Frossard, Dominique Gauguier, Alison H. Goodall, Omri Gottesman, Marc Haber, Bok-Ghee Han, Jianfeng Huang, Shapour Jalilzadeh, Thorsten Kessler, Inke R. König, Lars Lannfelt, Wolfgang Lieb, Lars Lind, Cecilia M. Lindgren, Maisa Lokki, Patrik K. Magnusson, Nadeem H. Mallick, Narinder Mehra, Thomas Meitinger, Fazal-ur-Rehman Memon, Andrew P. Morris, Markku S. Nieminen, Nancy L. Pedersen, Annette Peters, Loukianos S. Rallidis, Asif Rasheed, Maria Samuel, Svati H. Shah, Juha Sinisalo, Kathleen E. Stirrups, Stella Trompet, Laiyuan Wang, Khan S. Zaman, Diego Ardissino, Eric Boerwinkle, Ingrid B. Borecki, Erwin P. Bottinger, Julie E. Buring, John C. Chambers, Rory Collins, L Adrienne Cupples, John Danesh, Ilja Demuth, Roberto Elosua, Stephen E. Epstein, Tõnu Esko, Mary F. Feitosa, Oscar H. Franco, Maria Grazia Franzosi, Christopher B. Granger, Dongfeng Gu, Vilmundur Gudnason, Alistair S. Hall, Anders Hamsten, Tamara B. Harris, Stanley L. Hazen, Christian Hengstenberg, Albert Hofman, Erik Ingelsson, Carlos Iribarren, J Wouter Jukema, Pekka J. Karhunen, Bong-Jo Kim, Jaspal S. Kooner, Iftikhar J. Kullo, Terho Lehtimäki, Ruth J. Loos, Olle Melander, Andres Metspalu, Winfried März, Colin N. Palmer, Markus Perola, Thomas Quertermous, Daniel J. Rader, Paul M. Ridker, Samuli Ripatti, Robert Roberts, Veikko Salomaa, Dharambir K. Sanghera, Stephen M. Schwartz, Udo Seedorf, Alexandre F. Stewart, David J. Stott, Joachim Thiery, Pierre A. Zalloua, Christopher J. O'Donnell, Muredach P. Reilly, Themistocles L. Assimes, John R. Thompson, Jeanette Erdmann, Robert Clarke, Hugh Watkins, Sekar Kathiresan, Ruth McPherson, Panos Deloukas, Heribert Schunkert, Martin Farrall, Department of Cardiovascular Sciences, University of Leicester and NIHR Leicester Biomedical Research Centre, Glenfield Hospital, Leicester, Mayo Clinic [Rochester], Service de Cardiologie Maladies Vasculaires [CHU Clermont-Ferrand], CHU Gabriel Montpied [Clermont-Ferrand], CHU Clermont-Ferrand-CHU Clermont-Ferrand, Icahn School of Medicine at Mount Sinai [New York] (MSSM), Victor Chang Cardiac Research Institute, University of New South Wales [Sydney] (UNSW), St. Vincent’s Clinical School [Sydney, Australia], UNSW Faculty of Medicine [Sydney], University of New South Wales [Sydney] (UNSW)-University of New South Wales [Sydney] (UNSW), Department of Health Sciences Research [Mayo Clinic] (HSR), Mayo Clinic, Paris-Centre de Recherche Cardiovasculaire (PARCC (UMR_S 970/ U970)), Hôpital Européen Georges Pompidou [APHP] (HEGP), Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Hôpitaux Universitaires Paris Ouest - Hôpitaux Universitaires Île de France Ouest (HUPO)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Hôpitaux Universitaires Paris Ouest - Hôpitaux Universitaires Île de France Ouest (HUPO)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Paris (UP), Université Paris Descartes - Faculté de Médecine (UPD5 Médecine), Université Paris Descartes - Paris 5 (UPD5), Sorbonne Université - Faculté de Médecine (SU FM), Sorbonne Université (SU), Service de génétique [CHU HEGP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Hôpital Européen Georges Pompidou [APHP] (HEGP), Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Hôpitaux Universitaires Paris Ouest - Hôpitaux Universitaires Île de France Ouest (HUPO)-Hôpitaux Universitaires Paris Ouest - Hôpitaux Universitaires Île de France Ouest (HUPO), Department of Cardiovascular Medicine, Mayo Clinic, Hôpital Universitaire Carémeau [Nîmes] (CHU Nîmes), and Centre Hospitalier Universitaire de Nîmes (CHU Nîmes)
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Adult ,Male ,medicine.medical_specialty ,Myocardial infarction ,Coronary Vessel Anomalies ,Fibromuscular dysplasia ,030204 cardiovascular system & hematology ,03 medical and health sciences ,0302 clinical medicine ,[SDV.MHEP.CSC]Life Sciences [q-bio]/Human health and pathology/Cardiology and cardiovascular system ,Internal medicine ,medicine ,Prevalence ,Fibromuscular Dysplasia ,Humans ,030212 general & internal medicine ,Vascular Diseases ,Artery dissection ,MESH: Australia ,United Kingdom ,USA ,Coronary Vessel Anomalies / epidemiology ,Endothelin-1 / genetics ,Microfilament proteins / genetics ,Genetic association ,Aged ,Endothelin-1 ,business.industry ,Microfilament Proteins ,Australia ,Cardiovascular disease in women ,Middle Aged ,medicine.disease ,R1 ,United States ,3. Good health ,[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics ,Genetic Loci ,Case-Control Studies ,Cardiology ,[SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie ,Female ,France ,Cardiology and Cardiovascular Medicine ,Scad ,business - Abstract
Background: \ud Spontaneous coronary artery dissection (SCAD) is an increasingly recognized cause of acute coronary syndromes (ACS) afflicting predominantly younger to middle-aged women. Observational studies have reported a high prevalence of extracoronary vascular anomalies, especially fibromuscular dysplasia (FMD) and a low prevalence of coincidental cases of atherosclerosis. PHACTR1/EDN1 is a genetic risk locus for several vascular diseases, including FMD and coronary artery disease, with the putative causal noncoding variant at the rs9349379 locus acting as a potential enhancer for the endothelin-1 (EDN1) gene.\ud \ud Objectives: \ud This study sought to test the association between the rs9349379 genotype and SCAD.\ud \ud Methods: \ud Results from case control studies from France, United Kingdom, United States, and Australia were analyzed to test the association with SCAD risk, including age at first event, pregnancy-associated SCAD (P-SCAD), and recurrent SCAD.\ud \ud Results: \ud The previously reported risk allele for FMD (rs9349379-A) was associated with a higher risk of SCAD in all studies. In a meta-analysis of 1,055 SCAD patients and 7,190 controls, the odds ratio (OR) was 1.67 (95% confidence interval [CI]: 1.50 to 1.86) per copy of rs9349379-A. In a subset of 491 SCAD patients, the OR estimate was found to be higher for the association with SCAD in patients without FMD (OR: 1.89; 95% CI: 1.53 to 2.33) than in SCAD cases with FMD (OR: 1.60; 95% CI: 1.28 to 1.99). There was no effect of genotype on age at first event, P-SCAD, or recurrence.\ud \ud Conclusions: \ud The first genetic risk factor for SCAD was identified in the largest study conducted to date for this condition. This genetic link may contribute to the clinical overlap between SCAD and FMD.
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- 2019
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23. Bring Back Mothers in Management: First-time Mothers’ Identity Integration and Managerial Career
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Yun-Kyoung Kim, Teresa Cardador, and Amit Kramer
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Identity (social science) ,Gender studies ,General Medicine ,Sociology - Published
- 2021
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24. Association analyses of East Asian individuals and trans-ancestry analyses with European individuals reveal new loci associated with cholesterol and triglyceride levels
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Alan B. Feranil, Cassandra N. Spracklen, Sing-Hui Lim, Cathy S.J. Fann, Tin Aung, Yii-Der Ida Chen, Yonghong Zhang, Li-Hsin Chien, Jirong Long, Xiuqing Guo, Chien-Hsiun Chen, Jyh-Ming Jimmy Juang, Fumihiko Takeuchi, Xueling Sim, Norihiro Kato, Wen-Harn Pan, Masato Isono, Tzung-Dau Wang, Jer-Yuarn Wu, Dongfeng Gu, Xu Wang, Xuhong Hou, Peng Chen, Wen-Jane Lee, Kae-Woei Liang, Sun-Ju Lee, Chao A. Hsiung, Meian He, Lee-Ming Chuang, Devin Absher, Chii-Min Hwu, Tangchun Wu, Li-Ching Chang, Sanghoon Moon, Mi Yeong Hwang, Chew-Kiat Heng, Sun Ha Jee, Feijie Wang, Yik Ying Teo, Kent D. Taylor, Shufa Du, Wen Bin Wei, Ching-Yu Cheng, I-Te Lee, Elias Salfati, Jie Wang, Cheng Hu, Chiea Chuen Khor, Qiuyin Cai, James E. Hixson, Toru Nabika, Wayne Huey-Herng Sheu, Qiao Fan, Woon-Puay Koh, Linda S. Adair, Jianjun Liu, Pok Chien Tan, Penny Gordon-Larsen, Yechiel Friedlander, Bok-Ghee Han, Keng-Hung Lin, Ying Wu, Hao Peng, E-Shyong Tai, Young-Jin Kim, Koichi Akiyama, Bong-Jo Kim, Rajkumar Dorajoo, Wanting Zhao, Tomohiro Katsuya, Stephen S. Rich, Sue-Anne Toh, Rong Zhang, Shengxu Li, Yuan-Tsong Chen, Ya Xing Wang, Keum Ji Jung, Xu Lin, Zhirong Guo, Wei Zheng, Karen L. Mohlke, Shu-Pei Tan, Rob M. van Dam, Liang Sun, Jiang He, Lixuan Gui, Tatsuhiko Tsunoda, Hui Cai, Aili Wang, Huaixing Li, Wei Huang, Yao Hu, Kevin Sandow, Toshihiro Tanaka, Thomas Quertermous, Themistocles L. Assimes, Jerome I. Rotter, Maren E Cannon, Tamara S. Roman, Yong-Bing Xiang, Yoon Shin Cho, Todd A. Johnson, Shi Jinxiu, Weiping Jia, Tien Yin Wong, Yun Kyoung Kim, Jie Yao, Xiao-Ou Shu, Jian-Min Yuan, Blanche Lim, Michiaki Kubo, Shu-Chun Chuang, Charumathi Sabanayagam, and Jost B. Jonas
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Adult ,Male ,0301 basic medicine ,Linkage disequilibrium ,Quantitative Trait Loci ,Locus (genetics) ,Genome-wide association study ,Quantitative trait locus ,Biology ,Polymorphism, Single Nucleotide ,Linkage Disequilibrium ,White People ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Asian People ,Gene Frequency ,Ethnicity ,Genetics ,Humans ,Allele ,Molecular Biology ,Allele frequency ,Alleles ,Genetic Association Studies ,Triglycerides ,Genetics (clinical) ,Genetic association ,Cholesterol ,Association Studies Articles ,General Medicine ,Middle Aged ,Lipids ,Lipoproteins, LDL ,030104 developmental biology ,chemistry ,Female ,Lipoproteins, HDL ,Corrigendum ,030217 neurology & neurosurgery ,Genome-Wide Association Study - Abstract
Large-scale meta-analyses of genome-wide association studies (GWAS) have identified >175 loci associated with fasting cholesterol levels, including total cholesterol (TC), high-density lipoprotein cholesterol (HDL-C), low-density lipoprotein cholesterol (LDL-C), and triglycerides (TG). With differences in linkage disequilibrium (LD) structure and allele frequencies between ancestry groups, studies in additional large samples may detect new associations. We conducted staged GWAS meta-analyses in up to 69,414 East Asian individuals from 24 studies with participants from Japan, the Philippines, Korea, China, Singapore, and Taiwan. These meta-analyses identified (P
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- 2017
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25. The Korea Biobank Array: Design and Identification of Coding Variants Associated with Blood Biochemical Traits
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Kyungheon Yoon, Yun Kyoung Kim, Young-Jin Kim, Min Young Park, Jae Kyung Park, Yontao Lu, Bong-Jo Kim, Sohee Han, Daesub Song, Sanghoon Moon, Dong Mun Shin, Mi Yeong Hwang, Taejoon Park, Hye-Mi Jang, and Jong Eun Lee
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0301 basic medicine ,Adult ,Genotype ,Sequencing data ,Mutation, Missense ,lcsh:Medicine ,Genome-wide association study ,Biology ,Polymorphism, Single Nucleotide ,Article ,03 medical and health sciences ,0302 clinical medicine ,Republic of Korea ,Missense mutation ,Humans ,Alanine aminotransferase ,lcsh:Science ,ALDH2 ,Aged ,Biological Specimen Banks ,Genetics ,Multidisciplinary ,Korean population ,Genome, Human ,lcsh:R ,Genetic Variation ,Reproducibility of Results ,Middle Aged ,Biobank ,030104 developmental biology ,Blood ,Genetic Loci ,lcsh:Q ,030217 neurology & neurosurgery ,Imputation (genetics) ,Genome-Wide Association Study - Abstract
We introduce the design and implementation of a new array, the Korea Biobank Array (referred to as KoreanChip), optimized for the Korean population and demonstrate findings from GWAS of blood biochemical traits. KoreanChip comprised >833,000 markers including >247,000 rare-frequency or functional variants estimated from >2,500 sequencing data in Koreans. Of the 833 K markers, 208 K functional markers were directly genotyped. Particularly, >89 K markers were presented in East Asians. KoreanChip achieved higher imputation performance owing to the excellent genomic coverage of 95.38% for common and 73.65% for low-frequency variants. From GWAS (Genome-wide association study) using 6,949 individuals, 28 associations were successfully recapitulated. Moreover, 9 missense variants were newly identified, of which we identified new associations between a common population-specific missense variant, rs671 (p.Glu457Lys) of ALDH2, and two traits including aspartate aminotransferase (P = 5.20 × 10−13) and alanine aminotransferase (P = 4.98 × 10−8). Furthermore, two novel missense variants of GPT with rare frequency in East Asians but extreme rarity in other populations were associated with alanine aminotransferase (rs200088103; p.Arg133Trp, P = 2.02 × 10−9 and rs748547625; p.Arg143Cys, P = 1.41 × 10−6). These variants were successfully replicated in 6,000 individuals (P = 5.30 × 10−8 and P = 1.24 × 10−6). GWAS results suggest the promising utility of KoreanChip with a substantial number of damaging variants to identify new population-specific disease-associated rare/functional variants.
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- 2019
26. The Challenge and Opportunity of Navigating Multiple Identities at Work
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Natalya Alonso, Kimberly D. Elsbach, Elise Bair Jones, Jennifer Lynch, Njoke Thomas, Elisabeth Yang, Teresa Cardador, Yun-Kyoung Kim, and Heather Ciara Vough
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Work (electrical) ,business.industry ,General Medicine ,Sociology ,Public relations ,Construct (philosophy) ,business - Abstract
How employees construct and manage their identities at work has important consequences for individuals and organizations (Ashforth & Schinoff, 2016). Yet recent workplace trends are blurring the bo...
- Published
- 2020
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27. Dual Stimuli-Triggered Nanogels in Response to Temperature and pH Changes for Controlled Drug Release
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Bong Geun Chung, Jae Hyun Lim, Yun Kyoung Kim, Eun-Joong Kim, Hyang Hwa Jeon, Woo Jin Hong, and Heui Kyoung Cho
- Subjects
Materials science ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Lower critical solution temperature ,chemistry.chemical_compound ,PNIPAM ,LCST ,lcsh:TA401-492 ,General Materials Science ,Acrylic acid ,Controlled drug release ,Nano Express ,pH ,Temperature ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,Fluorescence ,0104 chemical sciences ,chemistry ,Acrylamide ,Drug delivery ,Drug release ,Biophysics ,lcsh:Materials of engineering and construction. Mechanics of materials ,Nanocarriers ,0210 nano-technology ,Nanogel - Abstract
Poly-N-isopropyl acrylamide (PNIPAM) nanogels have been modified with different acrylic acid (AAc) contents for the efficient control of lower critical solution temperature (LCST). In this study, PNIPAM-co-AAc nanogels nanogels showed two volume phase transitions in comparison with PNIPAM. The transition temperature of PNIPAM nanogels was increased with AAc contents. The controlled drug release performance of PNIPAM-co-AAc nanogels loaded with β-lapachone was attributed to the AAc content ratio and was efficiently triggered in response to temperature and pH. Moreover, a colorimetric cell proliferation assay and direct fluorescence-based live/dead staining were used to confirm the concurrence on drug release profiles. Finally, PNIPAM-co-AAc20 showed a relatively low level of drug release in the range of acidic to neutral pH at body temperature, while maximizing drug release at basic pH. Therefore, we demonstrated that the PNIPAM-based nanogel with the temperature- and pH-responsive features could be a promising nanocarrier for potential intestine-specific drug delivery. Electronic supplementary material The online version of this article (10.1186/s11671-019-2909-y) contains supplementary material, which is available to authorized users.
- Published
- 2018
28. Exome chip-driven association study of lipidemia in14,000 Koreans and evaluation of genetic effect on identified variants between different ethnic groups
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Mi Yeong Hwang, Sanghoon Moon, Sohee Han, Bong-Jo Kim, Yun Kyoung Kim, Kyungheon Yoon, and Young-Jin Kim
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Apolipoprotein E ,Male ,Candidate gene ,Apolipoprotein B ,Epidemiology ,Genome-wide association study ,Hyperlipidemias ,Polymorphism, Single Nucleotide ,03 medical and health sciences ,Asian People ,Republic of Korea ,medicine ,Ethnicity ,Humans ,Exome ,Genetics (clinical) ,030304 developmental biology ,Genetics ,0303 health sciences ,biology ,030305 genetics & heredity ,Hypertriglyceridemia ,Lipid metabolism ,Middle Aged ,medicine.disease ,Lipids ,Phenotype ,biology.protein ,lipids (amino acids, peptides, and proteins) ,Female ,Dyslipidemia ,Genome-Wide Association Study - Abstract
Lipid levels in blood are widely used to diagnose and monitor chronic diseases. It is essential to identify the genetic traits involved in lipid metabolism for understanding chronic diseases. However, the influence of genetic traits varies depending on race, sex, age, and ethnicity. Therefore, research focusing on populations of individual countries is required, and the results can be used as a basis for comparison of results of other studies at the cross-racial and cross-country levels. In the present study, we selected lipid-related variants and evaluated their effects on lipid-related diseases in more than 14,000 subjects of three cohorts using the Illumina Human Exome Beadchip. A genome-wide association study was conducted using EPACTs after adjusting for age, sex, and recruitment area. A genome-wide significance cutoff was defined as p
- Published
- 2018
29. Can HPWS and Unions Work Together to Reduce Employee Turnover Intention in Foreign MNCs in China?
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Ying Chen, Zhiqiang Liu, Guozhen Zhao, Guofeng Wang, and Yun-Kyoung Kim
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Work (electrical) ,Social exchange theory ,Turnover ,Multinational corporation ,Turnover intention ,Organizational commitment ,China ,Work systems ,Psychology ,Social psychology - Abstract
Guided by social exchange theory and signaling theory, this chapter investigates the relationship between individual perceptions of high-performance work systems (HPWS), union instrumentality, and employees’ turnover intention. The results obtained from a multilevel and multisource sample of more than 1,300 employees in 37 multinational corporation based in China show that, in contrast to our hypothesis, union instrumentality is not directly related to turnover intention; rather, the results from the post hoc mediation analysis show that union instrumentality is indirectly and negatively related to turnover intention through affective organizational commitment. Consistent with our hypothesis, the results of our analysis show that union instrumentality serves as an important contingent factor in the relationship between HPWS and employee turnover intention. The relationship between HPWS and turnover intention becomes positive when employee union instrumentality is low.
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- 2018
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30. Genome-based exome sequencing analysis identifies GYG1, DIS3L and DDRGK1 are associated with myocardial infarction in Koreans
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Bok Ghee Han, Bok Soo Lee, Sang Hak Lee, Yangsoo Jang, Min Young Park, Sanghoon Moon, Yun Kyoung Kim, Jeong Euy Park, and Ji-Young Lee
- Subjects
0301 basic medicine ,Adult ,Male ,Genotype ,Myocardial Infarction ,Genome-wide association study ,030204 cardiovascular system & hematology ,Biology ,Genome ,Polymorphism, Single Nucleotide ,Coronary artery disease ,03 medical and health sciences ,0302 clinical medicine ,Ribonucleases ,Asian People ,Risk Factors ,Exome Sequencing ,Genetics ,medicine ,Humans ,Genetic Predisposition to Disease ,Genetic variability ,Myocardial infarction ,Gene ,Exome sequencing ,Genetic association ,Adaptor Proteins, Signal Transducing ,Glycoproteins ,Middle Aged ,medicine.disease ,030104 developmental biology ,Glucosyltransferases ,Female ,Carrier Proteins ,Genome-Wide Association Study - Abstract
Myocardial infarction (MI) is a complex disease caused by combination of genetic and environmental factors. Although genome-wide association studies (GWAS) identified more than 46 risk loci which are associated with coronary artery disease and MI, most of the genetic variability in MI still remains undefined. Here, we screened the susceptibility loci for MI using exome sequencing and validated candidate variants in replication sets. We identified that three genes (GYG1, DIS3L and DDRGK1) were associated with MI at the discovery and replication stages. Further research will be required to determine the functional association of these genes with MI risk, and these associations have to be confirmed in other ethnic populations.
- Published
- 2018
31. Genome-Wide Association Study Meta-Analysis of Long Term Average Blood Pressure in East Asians
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Santhi K. Ganesh, E-Shyong Tai, Chieh Hsiang Lu, Jie Yao, Jia Yu Koh, Dongfeng Gu, Tanika N. Kelly, Tangchun Wu, Jer-Yuarn Wu, Neelam Kumari, DC Rao, Jinying Zhao, Sohee Han, Liang Sun, Xu Lin, Jerome I. Rotter, Ju Young Lee, Yun Kyoung Kim, Yao Hu, Walter Palmas, Meian He, Lixuan Gui, Kae-Woei Liang, Hua Hu, Chien-Hsiun Chen, Bong-Jo Kim, I-Te Lee, Xueling Sim, Rajkumar Dorajoo, Huaixing Li, Kent D. Taylor, Yik-Ying Teo, Jianjun Liu, Sanghoon Moon, Wayne H-H Sheu, Wen-Jane Lee, Bok-Ghee Han, Yingfeng Zheng, Yii-Der Ida Chen, Tien Yin Wong, Ching-Yu Cheng, Jiang He, Changwei Li, James E. Hixson, Yiqin Wang, Yunfeng He, Xiuqing Guo, Jing Chen, Leslie J. Raffel, and Fuu-Jen Tsai
- Subjects
0301 basic medicine ,Male ,Mean arterial pressure ,Locus (genetics) ,Genome-wide association study ,Blood Pressure ,Biology ,Polymorphism, Single Nucleotide ,Article ,03 medical and health sciences ,Asian People ,Genetics ,Humans ,Gene ,Genetics (clinical) ,Asia, Eastern ,030104 developmental biology ,Blood pressure ,Phenotype ,CYP17A1 ,Genetic Loci ,Meta-analysis ,Female ,ATP2B1 ,Cardiology and Cardiovascular Medicine ,Genome-Wide Association Study - Abstract
Background— Genome-wide single marker and gene-based meta-analyses of long-term average (LTA) blood pressure (BP) phenotypes may reveal novel findings for BP. Methods and Results— We conducted genome-wide analysis among 18 422 East Asian participants (stage 1) followed by replication study of ≤46 629 participants of European ancestry (stage 2). Significant single-nucleotide polymorphisms and genes were determined by a P −8 and 2.5×10 − 6 , respectively, in joint analyses of stage-1 and stage-2 data. We identified 1 novel ARL3 variant, rs4919669 at 10q24.32, influencing LTA systolic BP (stage-1 P =5.03×10 − 8 , stage-2 P =8.64×10 − 3 , joint P =2.63×10 − 8 ) and mean arterial pressure (stage-1 P =3.59×10 − 9 , stage-2 P =2.35×10 − 2 , joint P =2.64×10 − 8 ). Three previously reported BP loci ( WBP1L , NT5C2 , and ATP2B1 ) were also identified for all BP phenotypes. Gene-based analysis provided the first robust evidence for association of KCNJ11 with LTA systolic BP (stage-1 P =8.55×10 − 6 , stage-2 P =1.62×10 − 5 , joint P =3.28×10 − 9 ) and mean arterial pressure (stage-1 P =9.19×10 − 7 , stage-2 P =9.69×10 − 5 , joint P =2.15×10 − 9 ) phenotypes. Fourteen genes ( TMEM180 , ACTR1A , SUFU , ARL3 , SFXN2 , WBP1L , CYP17A1 , C10orf32 , C10orf32 - ASMT , AS3MT , CNNM2 , and NT5C2 at 10q24.32; ATP2B1 at 12q21.33; and NCR3LG1 at 11p15.1) implicated by previous genome-wide association study meta-analyses were also identified. Among the loci identified by the previous genome-wide association study meta-analysis of LTA BP, we transethnically replicated associations of the KCNK3 marker rs1275988 at 2p23.3 with LTA systolic BP and mean arterial pressure phenotypes ( P =1.27×10 − 4 and 3.30×10 − 4 , respectively). Conclusions— We identified 1 novel variant and 1 novel gene and present the first direct evidence of relevance of the KCNK3 locus for LTA BP among East Asians.
- Published
- 2017
32. Aerosol Approach for Hollow Spheres of a Porous 3D Carbon Nanotube/CuO Network and Their Anodic Properties for Lithium-Ion Battery
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Soon Hyung Hong, Yun-Kyoung Kim, Jun Ho Lee, and Seungll Cha
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Nanocomposite ,Materials science ,Biomedical Engineering ,Bioengineering ,General Chemistry ,Carbon nanotube ,Condensed Matter Physics ,Electrochemistry ,Lithium-ion battery ,Anode ,law.invention ,Electrical resistivity and conductivity ,law ,Electrode ,General Materials Science ,Composite material ,Porosity - Abstract
Hollow spheres consisting of porous CNT/CuO nanocomposite networks were prepared by aerosol process and their enhanced anodic properties for lithium-ion battery were investigated. Hollow spheres of CNT/CuO nanocomposites showed a 3D network wherein the length of the electron path was quite short compared with the agglomerated CNT/CuO nanocomposites. From electrochemical measurements, CuO itself shows poor discharge capacity and cycling performance due to its low electronic conductivity. In the CNT/CuO nanocomposite, enhanced discharge capacity was observed and showed similar values regardless of the morphology. With the addition of CNTs to CuO, CNTs can form a network that acts as an electron path-way in the insulating CuO matrix, leading to increased electrical conductivity. The morphology of nanocomposite affected cycle stability. Hollow spheres of CNT/CuO nanocomposite showed better cycle stability than that of agglomerated CNT/CuO nanocomposite. The hollow sphere of a CNT/CuO nanocomposite comprising a 3D network of CNTs can be applied as a high capacity anode material in Li-ion batteries.
- Published
- 2014
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33. Genome-Wide Association Study Identifies Candidate Loci Associated with Platelet Count in Koreans
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Young-Jin Kim, Ji Hee Oh, Sanghoon Moon, Bong Jo Kim, and Yun Kyoung Kim
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Genetics ,education.field_of_study ,genome-wide association study ,Korea ,lcsh:QH426-470 ,Population ,Health Informatics ,Genome-wide association study ,Arteriosclerosis ,Biology ,platelet count ,medicine.disease ,lcsh:Genetics ,medicine.anatomical_structure ,medicine ,SH2B3 Gene ,Platelet ,Original Article ,Bone marrow ,Platelet activation ,education ,Gene ,Ecology, Evolution, Behavior and Systematics - Abstract
Platelets are derived from the fragments that are formed from the cytoplasm of bone marrow megakaryocytes-small irregularly shaped anuclear cells. Platelets respond to vascular damage, contracts blood vessels, and attaches to the damaged region, thereby stopping bleeding, together with the action of blood coagulation factors. Platelet activation is known to affect genes associated with vascular risk factors, as well as with arteriosclerosis and myocardial infarction. Here, we performed a genome-wide association study with 352,228 single-nucleotide polymorphisms typed in 8,842 subjects of the Korea Association Resource (KARE) project and replicated the results in 7,861 subjects from an independent population. We identified genetic associations between platelet count and common variants nearby chromosome 4p16.1 (p = 1.46 × 10(-10), in the KIAA0232 gene), 6p21 (p = 1.36 × 10(-7), in the BAK1 gene), and 12q24.12 (p = 1.11 × 10(-15), in the SH2B3 gene). Our results illustrate the value of large-scale discovery and a focus for several novel research avenues.
- Published
- 2014
34. Ribosomal Protein S6, a Target of Rapamycin, Is Involved in the Regulation of rRNA Genes by Possible Epigenetic Changes in Arabidopsis
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Myung Sok Lee, Woo-Young Kim, Choong Ill Cheon, Yoon Sun Hur, Yun Kyoung Kim, Sunghan Kim, Desh Pal S. Verma, and Yun-jeong Shin
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DNA, Plant ,Transcription, Genetic ,Arabidopsis ,Plant Biology ,Ribosome biogenesis ,Biology ,Genes, Plant ,DNA, Ribosomal ,Biochemistry ,Histone Deacetylases ,Epigenesis, Genetic ,Phosphatidylinositol 3-Kinases ,5S ribosomal RNA ,Ribosomal protein ,RNA, Ribosomal, 18S ,Promoter Regions, Genetic ,Molecular Biology ,Ribosomal DNA ,Genetics ,Arabidopsis Proteins ,Protoplasts ,Genes, rRNA ,Cell Biology ,Ribosomal RNA ,RRNA transcription ,RNA, Plant ,Ribosomal protein s6 ,Eukaryotic Ribosome ,Cell Nucleolus - Abstract
The target of rapamycin (TOR) kinase pathway regulates various biological processes, including translation, synthesis of ribosomal proteins, and transcription of rRNA. The ribosomal protein S6 (RPS6) is one of the well known downstream components of the TOR pathway. Ribosomal proteins have been known to have diverse functions in regulating cellular metabolism as well as protein synthesis. So far, however, little is known about other possible role(s) of RPS6 in plants, besides being a component of the 40 S ribosomal subunit and acting as a target of TOR. Here, we report that RPS6 may have a novel function via interaction with histone deacetylase 2B (AtHD2B) that belongs to the plant-specific histone deacetylase HD2 family. RPS6 and AtHD2B were localized to the nucleolus. Co-expression of RPS6 and AtHD2B caused a change in the location of both RPS6 and AtHD2B to one or several nucleolar spots. ChIP analysis suggests that RPS6 directly interacts with the rRNA gene promoter. Protoplasts overexpressing both AtHD2B and RPS6 exhibited down-regulation of pre-18 S rRNA synthesis with a concomitant decrease in transcription of some of the ribosomal proteins, suggesting their direct role in ribosome biogenesis and plant development. This is consistent with the mutation in rps6b that results in reduction in 18 S rRNA transcription and decreased root growth. We propose that the interaction between RPS6 and AtHD2B brings about a change in the chromatin structure of rDNA and thus plays an important role in linking TOR signaling to rDNA transcription and ribosome biogenesis in plants.
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- 2014
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35. Still Difficult to Stand Up as Women Leaders:When Especially and What Can Organizations Do about it?
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Ning Hsu, Beth K. Humberd, Yun-Kyoung Kim, Clarissa Cortland, Serenity Lee, Seval Gündemir, Denise Lewin Loyd, Peter D. Harms, Elizabeth J. Johnson, Zoe Kinias, Daniel A. Newman, Lakshmi Ramarajan, Dustin Wood, Katherine W. Phillips, Jun-Yeob Kim, Ashley E. Martin, and Astrid C. Homan
- Subjects
Stereotype threat ,General Medicine ,Psychology ,Negative stereotype ,Social psychology - Abstract
Although a growing number of women are entering leadership positions, they are still exposed to stereotype threat (i.e., “being at risk of confirming, as self–characteristics, a negative stereotype...
- Published
- 2019
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36. Design and Implementation of Mobile Teleconference System Based on Hybrid Web
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Ji Hyun Choi and Yun Kyoung Kim
- Subjects
Engineering ,Multimedia ,business.industry ,sync ,Teleconference ,Mobile Web ,computer.software_genre ,Mobile search ,User device ,business ,computer ,Mobile device ,Mirroring ,Dependency (project management) - Abstract
Recently, there are several attempts to save temporal, spatial and paper resources through mobile teleconference. However, present application-based mobile solutions have limited access, and are occasionally not working because of its operating system dependency. In recent times, several researchers attempt to develop mobile teleconference systems that can operate in all operating systems. It is still required to install proprietary applications to sync screens in user device. In this paper, we propose a full duplex and real-time data mirroring technology based on hybrid web that allows syncing screens without application installation, and operates in all mobile devices.
- Published
- 2013
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37. RNA interference-mediated repression of S6 kinase 1 impairs root nodule development in soybean
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Desh Pal S. Verma, Choong-Ill Cheon, Sunghan Kim, Ji-Hyun Um, Seok-Bo Song, Yun-Kyoung Kim, and Suk-Ha Lee
- Subjects
Gene knockdown ,Root nodule ,Effector ,TOR Serine-Threonine Kinases ,Nitrogen assimilation ,Gene Expression ,Articles ,Cell Biology ,General Medicine ,Biology ,Ribosomal Protein S6 Kinases, 90-kDa ,Molecular biology ,Transcription (biology) ,Gene Knockdown Techniques ,Glutamine synthetase ,Gene expression ,RNA Interference ,Soybeans ,RNA, Small Interfering ,Root Nodules, Plant ,Leghemoglobin ,Molecular Biology ,Plant Proteins ,Signal Transduction - Abstract
Symbiotic nodule formation on legume roots is characterized with a series of developmental reprograming in root tissues, including extensive proliferation of cortical cells. We examined a possible involvement of the target of rapamycin (TOR) pathway, a central regulator of cell growth and proliferation in animals and yeasts, during soybean nodule development. Our results show that transcription of both GmTOR and its key downstream effector, GmS6K1, are activated during nodulation, which is paralleled with higher kinase activities of these gene products as well. RNAi-mediated knockdown of GmS6K1 impaired the nodule development with severely reduced nodule weight and numbers. In addition, expression of a few nodulins including leghemoglobin was also decreased, and consequently nitrogen fixation was found to be reduced by half. Proteomic analysis of the GmS6K1-RNAi nodules identified glutamine synthetase (GS), an essential enzyme for nitrogen assimilation in nodules, as one of the proteins that are significantly down regulated. These results appear to provide solid evidence for a functional link between GmS6K1 and nodule development.
- Published
- 2013
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38. A genome-wide association study of a coronary artery disease risk variant
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Ji-Young Lee, Bok-Soo Lee, Dong-Jik Shin, Kyung Woo Park, Young-Ah Shin, Kwang Joong Kim, Lyong Heo, Ji Young Lee, Yun Kyoung Kim, Young Jin Kim, Chang Bum Hong, Sang-Hak Lee, Dankyu Yoon, Hyo Jung Ku, Il-Young Oh, Bong-Jo Kim, Juyoung Lee, Seon-Joo Park, Jimin Kim, Hye-kyung Kawk, Jong-Eun Lee, Hye-kyung Park, Jae-Eun Lee, Hye-young Nam, Hyun-young Park, Chol Shin, Mitsuhiro Yokota, Hiroyuki Asano, Masahiro Nakatochi, Tatsuaki Matsubara, Hidetoshi Kitajima, Ken Yamamoto, Hyung-Lae Kim, Bok-Ghee Han, Myeong-Chan Cho, Yangsoo Jang, Hyo-Soo Kim, Jeong Euy Park, and Jong-Young Lee
- Subjects
Adult ,Male ,Genotyping Techniques ,Single-nucleotide polymorphism ,Genome-wide association study ,Coronary Artery Disease ,Biology ,Polymorphism, Single Nucleotide ,Asian People ,Risk Factors ,Genetics ,Genetic predisposition ,Humans ,SNP ,Genetic Predisposition to Disease ,Genetics (clinical) ,Aged ,Genetic association ,Genome, Human ,Middle Aged ,Tag SNP ,Genetic Loci ,Case-Control Studies ,Female ,Imputation (genetics) ,Genome-Wide Association Study ,SNP array - Abstract
Although over 30 common genetic susceptibility loci have been identified to be independently associated with coronary artery disease (CAD) risk through genome-wide association studies (GWAS), genetic risk variants reported to date explain only a small fraction of heritability. To identify novel susceptibility variants for CAD and confirm those previously identified in European population, GWAS and a replication study were performed in the Koreans and Japanese. In the discovery stage, we genotyped 2123 cases and 3591 controls with 521 786 SNPs using the Affymetrix SNP Array 6.0 chips in Korean. In the replication, direct genotyping was performed using 3052 cases and 4976 controls from the KItaNagoya Genome study of Japan with 14 selected SNPs. To maximize the coverage of the genome, imputation was performed based on 1000 Genome JPT+CHB and 5.1 million SNPs were retained. CAD association was replicated for three GWAS-identified loci (1p13.3/SORT1 (rs599839), 9p21.3/CDKN2A/2B (rs4977574), and 11q22.3/ PDGFD (rs974819)) in Koreans. From GWAS and a replication, SNP rs3782889 showed a strong association (combined P=3.95 × 10(-14)), although the association of SNP rs3782889 doesn't remain statistically significant after adjusting for SNP rs11066015 (proxy SNP with BRAP (r(2)=1)). But new possible CAD-associated variant was observed for rs9508025 (FLT1), even though its statistical significance did marginally reach at the genome-wide a significance level (combined P=6.07 × 10(-7)). This study shows that three CAD susceptibility loci, which were previously identified in European can be directly replicated in Koreans and also provides additional evidences implicating suggestive loci as risk variants for CAD in East Asian.
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- 2013
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39. Effect of CNTs on precipitation hardening behavior of CNT/Al–Cu composites
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Soon Hyung Hong, Seung-Il Cha, Yun-Kyoung Kim, and Dong H. Nam
- Subjects
Materials science ,Yield (engineering) ,Precipitation hardening ,law ,Ultimate tensile strength ,General Materials Science ,macromolecular substances ,General Chemistry ,Carbon nanotube ,Composite material ,Microstructure ,law.invention - Abstract
The precipitation hardening behavior of CNT/Al–Cu composites was investigated by characterization of microstructure and mechanical properties after aging heat treatment. It was found that CNTs accelerated the precipitation hardening behavior of CNT/Al–Cu composites due to the generation of excess dislocations. The CNT/Al–Cu composites; after aging heat treatment, show significant increase of yield and ultimate tensile strength compared to those values for the Al–Cu matrix; the composites also show an increase rate similar to that of CNT/Al–Cu composites without aging heat treatment. It was thought that the CNT/Al–Cu composites were strengthened by both the load transfer from the Al–Cu matrix to the CNTs and by precipitation hardening of the Al–Cu matrix.
- Published
- 2012
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40. Anthracene derivatives bearing thiourea and glucopyranosyl groups for the highly selective chiral recognition of amino acids: opposite chiral selectivities for similar binding units
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Yun Kyoung Kim, Han Na Lee, Singh, N. Jiten, Hee Jung Choi, Jin Ying Xue, Kwang S. Kim, Juyoung Yoon, and Myung Ho Hyun
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Amino acids -- Structure ,Nuclear magnetic resonance -- Usage ,Biological sciences ,Chemistry - Abstract
Anthracene derivatives with thiourea are studied as fluorescent chemosensors for chiral recognition of the two enantiomers of [alpha]-amino carboxylates. The binding affinities of the anthracene moiety and the methyl group are investigated by calculating the dispersion energy and the two dimensional NMR chemical shifts.
- Published
- 2008
41. Genome-wide Survey of Copy Number Variants Associated with Blood Pressure and Body Mass Index in a Korean Population
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Dong-Joon Kim, Ji-Young Lee, Yun-Kyoung Kim, Young-Ah Shin, Sanghoon Moon, Min-Jin Go, Young-Jin Kim, Chang Bum Hong, and Bong-Jo Kim
- Subjects
Genetics ,Blood pressure ,Genetic variation ,Cohort ,SNP ,Health Informatics ,Genome-wide association study ,Copy-number variation ,Biology ,Body mass index ,Ecology, Evolution, Behavior and Systematics ,SNP array - Abstract
Hypertension is the major factor of most death and high blood pressure (BP) can lead to stroke, myocardial in-farction and cardiac failure. Moreover, hypertension is strongly correlated with body mass index (BMI). Al-though the exact causes of hypertension are still un-clear, some of genetic loci were discovered from ge-nome-wide association study (GWAS). Therefore, it is essential to study genetic variation for finding more ge-netic factor affecting hypertension. The purpose of our study is to conduct a CNV association study for hyper-tension-related traits, BP and BMI, in Korean individuals. We identified 2,206 CNV regions from 3,274 commun-ity-based Korean participants using the Affymetrix Ge-nome-Wide Human SNP Array 6.0 platform and per-formed a logistic regression analysis of CNVs with two hypertension-related traits, BP and BMI. Moreover, the 4,692 participants in an independent cohort were se-lected for respective replication analyses. GWAS of CNV identified two loci encompassing previously known hy-pertension-related genes: LPA (lipoprotein) on 6q26, and JAK2 (Janus kinase 2) on 9p24, with suggestive p-val-ues (0.0334 for LPA and 0.0305 for JAK2). These two positive findings, however, were not evaluated in the replication stage. Our result confirmed the conclusion of CNV study from the WTCCC suggesting weak associa-tion with common diseases. This is the first study of CNV association study with BP and BMI in Korean pop-ulation and it provides a state of CNV association study with common human diseases using SNP array.Keywords: copy number variation, hypertension-related traits, BMI, blood pressure, genome-wide association study
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- 2011
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42. Identification of Causal and/or Rare Genetic Variants for Complex Traits by Targeted Resequencing in Population-based Cohorts
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Chang Bum Hong, Yoon Shin Cho, and Yun Kyoung Kim
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Genetics ,Nonsynonymous substitution ,education.field_of_study ,Population ,Health Informatics ,Single-nucleotide polymorphism ,Genome-wide association study ,Biology ,Genome ,education ,Genotyping ,Ecology, Evolution, Behavior and Systematics ,Genetic association ,Reference genome - Abstract
Genome-wide association studies (GWASs) have greatly contributed to the identification of common variants responsible for numerous complex traits. There are, however, unavoidable limitations in detecting causal and/or rare variants for traits in this approach, which depends on an LD-based tagging SNP microarray chip. In an effort to detect potential casual and/or rare variants for complex traits, such as type 2 diabetes (T2D) and triglycerides (TGs), we conducted a targeted resequencing of loci identified by the Korea Association REsource (KARE) GWAS. The target regions for resequencing comprised whole exons, exon-intron boundaries, and regulatory regions of genes that appeared within 1 Mb of the GWA signal boundary. From 124 individuals selected in population-based cohorts, a total of 0.7 Mb target regions were captured by the NimbleGen sequence capture 385K array. Subsequent sequencing, carried out by the Roche 454 Genome Sequencer FLX, generated about 110,000 sequence reads per individual. Mapping of sequence reads to the human reference genome was performed using the SSAHA2 program. An average of 62.2% of total reads was mapped to targets with an average 22X-fold coverage. A total of 5,983 SNPs (average 846 SNPs per individual) were called and annotated by GATK software, with 96.5% accuracy that was estimated by comparison with Affymetrix 5.0 genotyped data in identical individuals. About 51% of total SNPs were singletons that can be considered possible rare variants in the population. Among SNPs that appeared in exons, which occupies about 20% of total SNPs, 304 nonsynonymous singletons were tested with Polyphen to predict the protein damage caused by mutation. In total, we were able to detect 9 and 6 potentially functional rare SNPs for T2D and triglycerides, respectively, evoking a further step of replication genotyping in independent populations to prove their bona fide relevance to traits.
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- 2010
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43. Employees’ Attitudes Toward Strike in Multinational Corporations in China
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Ying Chen, Yun-Kyoung Kim, Zhiqiang Liu, and Guofeng Wang
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Market economy ,Multinational corporation ,Social exchange theory ,General Medicine ,Business ,China - Abstract
Labor strikes are on the rise in China; therefore, it is important to study what predicts Chinese workers’ attitudes toward strikes. Using social exchange theory as an overarching framework, we ext...
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- 2018
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44. A Cell-based Method to Monitor the Interaction between Hepatitis B Virus Capsid and Surface Proteins
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Hyesung Jeon, Chanhoo Park, Yeon Gyu Yu, Bong-Suk Jin, Yun-Kyoung Kim, Doo Wan Boo, and Soo Jin Oh
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Hepatitis B virus ,Chemistry ,viruses ,Capsomere ,General Chemistry ,biochemical phenomena, metabolism, and nutrition ,medicine.disease_cause ,Fusion protein ,Molecular biology ,Virus ,Green fluorescent protein ,Cell biology ,Pleckstrin homology domain ,Capsid ,Cytoplasm ,medicine - Abstract
Interactions between the surface and capsid proteins of the hepatitis B virus (HBV) are critical for the assembly of virus particles. In this study, we developed a cell-based method to visualize the interactions between the capsid and surface proteins of HBV. Capsid-GFP, a capsid protein fused to a green fluorescence protein (GFP), forms nucleocapsid-like structures in the cytoplasm of mammalian cells. It relocates to the plasma membranes in cells expressing PH-PreS, a fusion protein consisting of the PreS region of the HBV surface protein and the PH domain of PLC-γ. Membrane localization of the capsid-GFP in these cells is prevented by an inhibitory peptide that blocks the interaction between the capsid and surface proteins. This dynamic localization of capsid-GFP is applicable for screening compounds that may potentially inhibit or prevent the assembly process of HBV particles.
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- 2009
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45. The genetics of blood pressure regulation and its target organs from association studies in 342,415 individuals
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Timo A. Lakka, Kathleen Stirrups, Jean Ferrières, Ying Wu, Gulum Kosova, Toby Johnson, Heather M. Stringham, Bruce M. Psaty, Bruna Gigante, Göran Hallmans, Cornelia M. van Duijn, Kae Woei Liang, Niclas Eriksson, N. William Rayner, Lynda M. Rose, Stavroula Kanoni, Xueling Sim, Evangelos Evangelou, Philippe Froguel, Michel Burnier, Andrew P. Morris, Olle Melander, Martin Farrall, Albert V. Smith, Brendan J. Keating, Thomas Illig, Johan Sundström, Dorret I. Boomsma, Kate Witkowska, Ellen M. Schmidt, Aki S. Havulinna, Ann-Kristin Petersen, Paul F. O'Reilly, Young Jin Kim, Kari Kuulasmaa, Tom Wilsgaard, John D. Eicher, Marcus E. Kleber, Francis S. Collins, Rona J. Strawbridge, Ronald M. Krauss, Fotios Drenos, Stuart K. Kim, Ken K. Ong, Pascal Bovet, Danish Saleheen, Jaspal S. Kooner, Karl-Heinz Herzig, Tien Yin Wong, Benjamin F. Voight, Stefania Bandinelli, Stéphane Lobbens, Colin A. McKenzie, Jing Hua Zhao, Terrence Forrester, Louise A. Donnelly, Alice Stanton, Jean Dallongeville, Kirill V. Tarasov, Narisu Narisu, Jürgen Gräßler, Luigi Ferrucci, Peter S. Sever, Paul Elliott, Tune H. Pers, Andrew J. Smith, Tomas Axelsson, Young Ah Shin, Nora Franceschini, James F. Wilson, Vilmundur Gudnason, Kati Kristiansson, Andrew A. Hicks, Kent D. Taylor, Genovefa Kolovou, Andrew D. Morris, André G. Uitterlinden, Serena Sanna, Xiuqing Guo, Honghuang Lin, Aravinda Chakravarti, Wayne Huey-Herng Sheu, Panos Deloukas, Linda S. Adair, Diana Kuh, Murielle Bochud, Eric Boerwinkle, Inger Njølstad, Meena Kumari, Norman Klopp, Leo-Pekka Lyytikäinen, Steven C. Hunt, Weihua Zhang, Tõnu Esko, Pierre Meneton, Markus Perola, Erik P A Van Iperen, Georg Ehret, Veikko Salomaa, Lars Lind, Zoltán Kutalik, Cristiano Fava, Caroline Hayward, Hugh S. Markus, Teresa Ferreira, Stefan R. Bornstein, Vasyl Pihur, Patricia B. Munroe, Anne U. Jackson, Eirini Marouli, Gabriele Müller, Damiano Baldassarre, Jacques E. Rossouw, Dan E. Arking, Maija Hassinen, Nicholas J. Wareham, Robert Roberts, Daniel I. Chasman, I. Shou Chang, Sylvain Sebert, Tove Fall, Roby Joehanes, Patrik K. E. Magnusson, John C. Chambers, Peter Vollenweider, Wen Jane Lee, Dmitry Shungin, Mathias Gorski, Christopher Newton-Cheh, Anders Franco-Cereceda, Ching-Yu Cheng, Yun Kyoung Kim, Ruth J. F. Loos, Lude Franke, Karen L. Mohlke, Yii-Der Ida Chen, Carlos Iribarren, Martina Müller-Nurasyid, Alexander Teumer, Andrew D. Johnson, Antonella Mulas, Ulf Gyllensten, Martin D. Tobin, George Dedoussis, Rainford J. Wilks, Joshua C. Bis, Beverley Balkau, Jie Yao, Frida Renström, Themistocles L. Assimes, Morris Brown, Inês Barroso, Hyun Min Kang, Loic Yengo, Mika Kähönen, Christopher J. Groves, Kirsti Kvaløy, Rainer Rauramaa, Heribert Schunkert, Satu Männistö, Marjo-Riitta Järvelin, Nancy L. Pedersen, Karl Gertow, Rick Jansen, Thomas Quertermous, Jarmo Virtamo, Lazaros Lataniotis, Serge Hercberg, Paul M. Ridker, Osorio Meirelles, Jostein Holmen, Phil Howard, G. Kees Hovingh, Jeanette Erdmann, Jong-Young Lee, Peter Schwarz, Ramaiah Nagaraja, Elizabeth Theusch, Wei Zhao, Sonia Shah, Chao A. Hsiung, Santhi K. Ganesh, Richard S. Cooper, John M. C. Connell, Jian'an Luan, Graciela E. Delgado, Eric Kim, Daniel Levy, Li Lin, Jerome I. Rotter, Andres Metspalu, Nabila Bouatia-Naji, Christopher J. O'Donnell, Roberto Elosua, Andrew Wong, Alanna C. Morrison, Juha Saltevo, Michael R. Barnes, Alan B. Weder, Kay-Tee Khaw, Leena Moilanen, Peter S. Chines, Claudia Langenberg, Marika Kaakinen, Asif Rasheed, Annette Peters, Angela Döring, Alena Stančáková, Richard A. Jensen, Jaana Lindström, Alison H. Goodall, Toshiko Tanaka, Loukianos S. Rallidis, Dabeeru C. Rao, Ann-Christine Syvänen, Alun Evans, Brenda W.J.H. Penninx, Sarah Edkins, Xiaohui Li, Neil Poulter, Jouko Saramies, Ulf de Faire, Walter Palmas, Jaakko Tuomilehto, Louise V. Wain, Cristina Menni, Stephen Bevan, Maria X. Sosa, Nanette R. Lee, Anuj Goel, Germaine C. Verwoert, Kjell Nikus, Helen R. Warren, May E. Montasser, Ren-Hua Chung, Francesco Gianfagna, Kristian Hveem, Rainer Rettig, Unnur Thorsteinsdottir, Lori L. Bonnycastle, Tim D. Spector, Paul W. Franks, Bamidele O. Tayo, Ilja M. Nolte, John Danesh, E. Shyong Tai, Mika Kivimäki, Devin Absher, Oddgeir L. Holmen, Per Eriksson, Pirjo Komulainen, Peter P. Pramstaller, Cameron D. Palmer, He Gao, Elena Tremoli, H.-Erich Wichmann, Myriam Fornage, Gyda Bjornsdottir, Afshin Parsa, Anders Hamsten, Terho Lehtimäki, Lasse Folkersen, Janine F. Felix, Anna F. Dominiczak, Hinco J. Gierman, Edward G. Lakatta, Alex S. F. Doney, Erik Ingelsson, Colin N. A. Palmer, Najaf Amin, Hugh Watkins, Johanna Kuusisto, Vladan Mijatovic, Mark I. McCarthy, Joel N. Hirschhorn, Winfried März, Nilesh J. Samani, Stefan Enroth, Mark J. Caulfield, Gudmar Thorleifsson, Tsun-Po Yang, François Mach, Cristen J. Willer, Claudia P. Cabrera, Aline Wagner, Michael Boehnke, Elias Salfati, Sekar Kathiresan, Ramachandran S. Vasan, Franco Giulianini, Harm-Jan Westra, Harold Snieder, Mark O. Goodarzi, M. Arfan Ikram, Fred Paccaud, Johannes H. Smit, Anna-Liisa Hartikainen, Xiaofeng Zhu, Markku Laakso, Ahmad Vaez, Albert Hofman, Amy J. Swift, Maria Hughes, I. Te Lee, Aroon D. Hingorani, Matti Uusitupa, Oscar H. Franco, Kenneth Rice, Veronique Vitart, Ross M. Fraser, Jouke-Jan Hottenga, Kari Stefansson, Dhananjay Vaidya, Johns Hopkins University, School of Medicine, Hôpitaux Universitaires de Genève (HUG), Saw Swee Hock School of Public Health, National University of Singapore (NUS), The Wellcome Trust Centre for Human Genetics [Oxford], University of Oxford [Oxford], Brigham and Women's Hospital [Boston], Harvard Medical School [Boston] (HMS), Department of Biostatistics, University of Michigan [Ann Arbor], University of Michigan System-University of Michigan System, University of Michigan System, Department of Computational Medicine and Bioinformatics (DCM&B), Queen Mary University of London (QMUL), GlaxoSmithKline, Glaxo Smith Kline, deCODE genetics [Reykjavik], University of Cambridge [UK] (CAM), University of Dundee, German Research Center for Environmental Health - Helmholtz Center München (GmbH), Karolinska University Hospital [Stockholm], Umea University Hospital, Lund University [Lund], Queen's University [Belfast] (QUB), National Institutes of Health, Department of Genomics of Common Disease, Imperial College London, Institut National de la Santé et de la Recherche Médicale (INSERM), Université Paris Descartes - Paris 5 (UPD5), National Institute of Health and Welfare, Institute for Molecular Medicine Finland (FIMM), University College London Hospitals (UCLH), University Hospital of Heidelberg, Harbor UCLA Medical Center [Torrance, Ca.], University of Tampere, University of Verona (UNIVR), Uppsala University Hospital, Department of Genetics, University Medical Center Groningen, University of Groningen, Groningen, Department of Medical Epidemiology and Biostatistics (MEB), Karolinska Institutet [Stockholm], Stanford University School of Medicine [CA, USA], Medical School University of Athens, Partenaires INRAE, Children's Hospital Oakland Research Institute, Boston Children's Hospital, Broad Institute of Harvard and MIT, University of Copenhagen = Københavns Universitet (KU), Statens Serum Institut [Copenhagen], Framingham Heart Dis Epidemiol Study, Department of Psychiatry, VU University Medical Center [Amsterdam], National Heart, Lung and Blood Institute, Osong Health Technology Administration Complex, University of Pennsylvania, Department of Genetics, University of North Carolina at Chapel Hill (UNC), Loyola University [Chicago], Centre Hospitalier Universitaire Vaudois (CHUV), Hudson Alpha Institute for Biotechnology, Erasmus University Rotterdam, Department of Medical Sciences, Uppsala University, Università degli Studi di Milano [Milano] (UNIMI), Istituto di Ricovero e Cura a Carattere Scientifico (IRCCS), Université Paris-Sud - Paris 11 (UP11), Azienda Sanitaria Firenze, Wellcome Trust Genome Campus, The Wellcome Trust Sanger Institute [Cambridge], University of Lincoln, University of Washington [Seattle], Amgen Inc., The University of Texas Health Science Center at Houston (UTHealth), VU University Amsterdam, University of Dresden Medical School, Université de Lausanne (UNIL), Healthcare NHS Trust, National Health Research Institutes, National University Health System [Singapore] (NUHS), Duke-NUS Medical School [Singapore], Singapore Eye Research Institute [Singapore] (SERI), National Human Genome Research Institute (NHGRI), Centre de Recherche Épidémiologie et Statistique Sorbonne Paris Cité (CRESS (U1153 / UMR_A_1125 / UMR_S_1153)), Université Paris Diderot - Paris 7 (UPD7)-Université Sorbonne Paris Cité (USPC)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut National de la Recherche Agronomique (INRA), Psychiatry, Amsterdam Neuroscience - Complex Trait Genetics, Radiology and nuclear medicine, EMGO - Mental health, Lin, Li, Mach, François, ProdInra, Migration, University of Oxford, Università degli studi di Verona = University of Verona (UNIVR), University of Copenhagen = Københavns Universitet (UCPH), Università degli Studi di Milano = University of Milan (UNIMI), Vrije Universiteit Amsterdam [Amsterdam] (VU), Université de Lausanne = University of Lausanne (UNIL), Institut National de la Recherche Agronomique (INRA)-Université Paris Diderot - Paris 7 (UPD7)-Université Paris Descartes - Paris 5 (UPD5)-Université Sorbonne Paris Cité (USPC)-Institut National de la Santé et de la Recherche Médicale (INSERM), Laboratoire d'Informatique Médicale et Ingénierie des Connaissances en e-Santé (LIMICS), Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Université Sorbonne Paris Nord, Vrije universiteit = Free university of Amsterdam [Amsterdam] (VU), EMGO+ - Lifestyle, Overweight and Diabetes, Biological Psychology, APH - Amsterdam Public Health, Epidemiology and Data Science, Graduate School, Other departments, ACS - Amsterdam Cardiovascular Sciences, Vascular Medicine, Luan, Jian'an [0000-0003-3137-6337], Barroso, Ines [0000-0001-5800-4520], Danesh, John [0000-0003-1158-6791], Khaw, Kay-Tee [0000-0002-8802-2903], Markus, Hugh [0000-0002-9794-5996], Ong, Kenneth [0000-0003-4689-7530], Johnson, Kathleen [0000-0002-6823-3252], Wareham, Nicholas [0000-0003-1422-2993], Zhao, Jing Hua [0000-0003-4930-3582], Langenberg, Claudia [0000-0002-5017-7344], Apollo - University of Cambridge Repository, Life Course Epidemiology (LCE), Groningen Institute for Gastro Intestinal Genetics and Immunology (3GI), Stem Cell Aging Leukemia and Lymphoma (SALL), CHARGE-EchoGen Consortium, CHARGE-HF Consortium, Wellcome Trust Case Control Consortium, Medical Microbiology & Infectious Diseases, Epidemiology, Neurology, Radiology & Nuclear Medicine, Internal Medicine, Clinical Genetics, Biochemistry, National Institute for Health Research, and Medical Research Council (MRC)
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0301 basic medicine ,Netherlands Twin Register (NTR) ,CHROMATIN ,[SDV]Life Sciences [q-bio] ,LOCI ,Genome-wide association study ,Blood Pressure ,SUSCEPTIBILITY ,Bioinformatics ,Cardiovascular ,Genome-wide association studies ,Medical and Health Sciences ,single nucleotide polymorphism ,CHARGE-EchoGen consortium ,GWAS ,2.1 Biological and endogenous factors ,Aetiology ,Cells, Cultured ,African Continental Ancestry Group ,Genetics & Heredity ,Genetics ,ddc:616 ,Kidney ,Framingham Risk Score ,Cultured ,COMMON VARIANTS ,11 Medical And Health Sciences ,Single Nucleotide ,Biological Sciences ,African Continental Ancestry Group/genetics ,Asian Continental Ancestry Group/genetics ,Blood Pressure/genetics ,Genome-Wide Association Study ,Humans ,Hypertension/genetics ,Hypertension/pathology ,Microarray Analysis ,Polymorphism, Single Nucleotide ,[SDV] Life Sciences [q-bio] ,medicine.anatomical_structure ,Hypertension/genetics/pathology ,Hypertension ,Medical genetics ,Wellcome Trust Case Control Consortium ,Life Sciences & Biomedicine ,TRAITS ,Biotechnology ,Asian Continental Ancestry Group ,medicine.medical_specialty ,CHARGE-EchoGen Consortium ,Cells ,Black People ,BIOLOGY ,Single-nucleotide polymorphism ,Biology ,Blood pressure, hypertension, genetics, single nucleotide polymorphism, GWAS ,03 medical and health sciences ,SDG 3 - Good Health and Well-being ,Asian People ,medicine ,Polymorphism ,GENOME-WIDE ASSOCIATION ,CELL-TYPES ,METAANALYSIS ,Genetic association ,Science & Technology ,CHARGE-HF consortium ,06 Biological Sciences ,Genetic architecture ,030104 developmental biology ,Blood pressure ,CHARGE-HF Consortium ,ARTERIAL-HYPERTENSION ,Developmental Biology - Abstract
To dissect the genetic architecture of blood pressure (BP) and assess how its elevation promotes downstream cardiovascular diseases, we analyzed 128,272 SNPs from targeted and genome-wide arrays in 201,529 individuals of European ancestry. Genotypes from an additional 140,886 individuals of European ancestry were used as validation for loci reaching genome-wide significance but without prior support in the literature. We identified 66 BP loci, of which 17 were novel and 15 harbored multiple distinct association signals, and which together explain up to 3.5% of BP variation. The 66 index SNPs were enriched for cis-regulatory elements, particularly in vascular endothelial cells, consistent with a primary role in BP control through modulating blood vessel tone and fluid filtration across multiple tissues, not solely the kidney. Importantly, the 66 index SNPs combined in a risk score showed comparable effects in 64,421 individuals of non-European descent (South-Asian, East-Asian and African), confirming that these are ancestral physiological effects that arose prior to human migration out of Africa. The 66-SNP BP risk score was significantly associated with target-organ damage in multiple tissues, with minor effects in the kidney. Our data expand current knowledge of BP pathways, and also, highlight that BP regulation and its effects may occur in multiple organs and tissues beyond the classic renal system.
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- 2016
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46. ATHB23, an Arabidopsis class I homeodomain-leucine zipper gene, is expressed in the adaxial region of young leaves
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Soon-Young Choi, Ora Son, Choong-Ill Cheon, Mi-Ran Kim, Myeong-Sok Lee, Yun-Kyoung Kim, Kyoung-Hee Nam, and Gyung-Tae Kim
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Homeodomain Proteins ,Regulation of gene expression ,Leucine Zippers ,Leucine zipper ,biology ,Arabidopsis Proteins ,Meristem ,fungi ,Mutant ,Arabidopsis ,food and beverages ,Plant Science ,General Medicine ,biology.organism_classification ,Molecular biology ,Gibberellins ,Plant Leaves ,Gene Expression Regulation, Plant ,Mutation ,Gene expression ,Homeobox ,Agronomy and Crop Science ,Gene - Abstract
Homeobox genes are essential regulators of plant development. ATHB23, a class I homeodomain leucine zipper gene of Arabidopsis, was found to be induced by treatment with the phytohormone gibberellin (GA). In order to clarify its role in development, we performed a histochemical analysis of transgenic plants containing a construct with a GUS::GFP reporter under the control of the 1.5 kb upstream region of ATHB23. The construct was mainly expressed in young leaves and the styles of flowers but not in mature leaves. Microscopic examination of young leaves revealed that it was expressed in the adaxial domain of leaf primordia and the rib meristem. Expression of ATHB23, like that of GA5 encoding GA 20-oxidase, was reduced in mutants related to adaxial-abaxial leaf polarity (phb-1d, se-2, and kan1 kan2). Reduced expression of the GUS::GFP reporter gene was also observed in an se-2 background. These results indicate that ATHB23 is under the control of GA and other activators such as PHB, and is involved in establishing polarity during leaf development.
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- 2007
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47. Association of Metabolites with Obesity and Type 2 Diabetes Based on FTO Genotype
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Yeon Jung Kim, Ho Yeong Yu, Bong Jo Kim, Yun Kyoung Kim, Jun Ho Yun, Heun Sik Lee, Jeongmin Kim, and Suyeon Park
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0301 basic medicine ,Heredity ,endocrine system diseases ,Physiology ,lcsh:Medicine ,Genome-wide association study ,Type 2 diabetes ,Biochemistry ,Fats ,0302 clinical medicine ,Genotype ,Medicine and Health Sciences ,Metabolites ,Amino Acids ,lcsh:Science ,Genetics ,Multidisciplinary ,Organic Compounds ,Valine ,Genomics ,Lipids ,3. Good health ,Genetic Mapping ,Chemistry ,Physiological Parameters ,030220 oncology & carcinogenesis ,Alpha-Ketoglutarate-Dependent Dioxygenase FTO ,Physical Sciences ,Metabolic Pathways ,Research Article ,Single-nucleotide polymorphism ,Variant Genotypes ,Biology ,03 medical and health sciences ,medicine ,Genome-Wide Association Studies ,Humans ,Obesity ,Allele ,Alleles ,Genetic association ,lcsh:R ,Body Weight ,Organic Chemistry ,Chemical Compounds ,nutritional and metabolic diseases ,Biology and Life Sciences ,Computational Biology ,Proteins ,Human Genetics ,medicine.disease ,Genome Analysis ,030104 developmental biology ,Metabolism ,Diabetes Mellitus, Type 2 ,Aliphatic Amino Acids ,Genetic Loci ,lcsh:Q ,Genome-Wide Association Study - Abstract
The single nucleotide polymorphism rs9939609 of the gene FTO, which encodes fat mass and obesity–associated protein, is strongly associated with obesity and type 2 diabetes (T2D) in multiple populations; however, the underlying mechanism of this association is unclear. The present study aimed to investigate FTO genotype–dependent metabolic changes in obesity and T2D. To elucidate metabolic dysregulation associated with disease risk genotype, genomic and metabolomic datasets were recruited from 2,577 participants of the Korean Association REsource (KARE) cohort, including 40 homozygous carriers of the FTO risk allele (AA), 570 heterozygous carriers (AT), and 1,967 participants carrying no risk allele (TT). A total of 134 serum metabolites were quantified using a targeted metabolomics approach. Through comparison of various statistical methods, seven metabolites were identified that are significantly altered in obesity and T2D based on the FTO risk allele (adjusted p < 0.05). These identified metabolites are relevant to phosphatidylcholine metabolic pathway, and previously reported to be metabolic markers of obesity and T2D. In conclusion, using metabolomics with the information from genome-wide association studies revealed significantly altered metabolites depending on the FTO genotype in complex disorders. This study may contribute to a better understanding of the biological mechanisms linking obesity and T2D.
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- 2015
48. Trans-ancestry genome-wide association study identifies 12 genetic loci influencing blood pressure and implicates a role for DNA methylation
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Masato Isono, Jorma Viikari, Jianjun Liu, Xingwang Ye, Hao Peng, James Scott, Nanette R. Lee, Chris Hsu, Woon-Puay Koh, Torben Hansen, Vinicius Tragante, Christian Gieger, Tomohiro Katsuya, Aaron Isaacs, Norihiro Kato, Kjell Nikus, Dingliang Zhu, Tetsuro Miki, Zhirong Guo, Uzma Afzal, Hiroshi Kajio, Mika Kähönen, Terri L. Young, Jer-Yuarn Wu, Terho Lehtimäki, Oscar H. Franco, Niels Grarup, Stella Trompet, Rob M. van Dam, John Danesh, Weihua Zhang, Joanna D. Holbrook, Ryoichi Takayanagi, Miyako Kishimoto, Shuhei Yamaguchi, Jemma CHopewell, Thorkild I. A. Sørensen, André G. Uitterlinden, James Abbott, Cisca Wijmenga, Iris Postmus, Wilko Spiering, Gianluca Campanella, Michela Traglia, Ian J. Deary, Hirotsugu Ueshima, Tanja B. Grammer, Daniel OStram, Panos Deloukas, Huaixing Li, Tatsuaki Matsubara, Koichi Akiyama, Fumihiko Takeuchi, Young Jin Kim, Silke Szymczak, Dirk J. van Veldhuisen, Alexander W. Drong, Yu-Tang Gao, Imke Aits, Mark A. Pereira, Rajkumar Dorajoo, Marc Chadeau-Hyam, Benjamin Lehne, Bastiaan THeijman, Zuan Yu Mok, Timothy R. Braun, Mitsuhiro Yokota, Yechiel Friedlander, David C. Liewald, Pim van der Harst, Mahfuzar Rahman, Takayoshi Ohkubo, Aili Wang, Robert Clarke, Lisette Stolk, Pieter A. Doevendans, Wolfgang Lieb, Rebecca Mills, Sarah Parish, Katsuhiko Kohara, Martina Müller-Nurasyid, Nina Mononen, Steve Franks, Niek Verweij, Johanne Marie Justesen, Tin Aung, Rory Collins, J. Wouter Jukema, M.J. Pinidiyapathirage, Rory P. Wilson, Hong Kiat Ng, Joyce B. J. van Meurs, Yik Ying Teo, Wiek H. van Gilst, Wei Zheng, Robert WKoivula, John C. Chambers, Molly Scannell Bryan, Peng Chen, Gurpreet SWander, Lise Lotte N. Husemoen, David J. Stott, Li Ching Chang, Teresa Nutile, Lude Franke, Jaana Hartiala, Karen L. Mohlke, Folkert W. Asselbergs, Daniela Toniolo, Linda S. Adair, Tõnu Esko, Xueya Zhou, Marja Vääräsmäki, Ralhan Sarju, Hui Cai, Chiea Chuen Khor, Albert Hofman, Marc Jan Bonder, Shikta Das, Väinö Turjanmaa, Ying Wu, Masahiro Nakatochi, Habibul Ahsan, Michelle Ann Rozario, Andrew Bjonnes, Jaspal S. Kooner, Marcus E. Kleber, Rossella Sorice, Lavinia Paternoster, Yumi Matsushita, Tanika NKelly, Quang NNguyen, Stanley L. Hazen, Richa Saxena, Lin Tong, Kenneth Kwek, Keizo Ohnaka, Paolo Vineis, Sahoko Ichihara, Jos C. S. Kleinjans, Irene Mateo Leach, Yonghong Zhang, K. Sangher, Robin Young, Mika Kivimäki, Soterios A. Kyrtopoulos, Ching-Yu Cheng, William R. Scott, Andres Metspalu, Eranga N. Vithana, Ai Ling Teh, Tarunveer S. Ahluwalia, Alexandre F.R. Stewart, John M. Starr, Toru Nabika, Jeannette Lee, Andre Franke, Inês Barroso, Gail Davies, Olov Rolandsson, Wei Huang, Myron D. Gross, Yong-Bing Xiang, Cinzia Sala, Marjo-Riitta Järvelin, W. Frank Paul, Jian'an Luan, Jon White, Robert A. Scott, Torben Jørgensen, Jing He, Tien Yin Wong, Michiya Igase, Yi Zhang, Nur Sabrina Sapari, Simone Wahl, Ron T. Gansevoort, Rasheed Asif, Bruce H W Wolffenbuttel, Alauddin Ahmed, Annette Peters, Silva Kasela, Jiang He, Min Jin Go, Takao Sugiyama, Dongfeng Gu, Jagvir Grewal, Satoshi Umemura, Thomas Sparsø, Anna-Liisa Hartikainen, Hooman Allayee, Xu Wang, Meena Kumari, Eitaro Nakashima, Xu Lin, Harold Snieder, Ananda R. Wickremasinghe, Yun Kyoung Kim, Yuan-Tsong Chen, Chew-Kiat Heng, Alexessander Couto Alves, E. James Ames Hixso, Daniela Ruggiero, Kazuro Shimokawa, Muhammad GKibriya, Jong-Young Lee, Yasuharu Tabara, Oluf Pedersen, Bong Jo Kim, Marie Loh, Lili Milani, Loi D. Do, Dharambir Harambir, Joo Yeon Hwang, Thomas Meitinger, Todd L. Edwards, Danish Saleheen, Anuradhani Kasturiratne, Hiromi Rakugi, Sian Tsung Tan, Paul Elliott, Ken Yamamoto, Chien Hsiun Chen, Abbas Dehghan, Evelin Mihailov, Leo-Pekka Lyytikäinen, Xiao-Ou Shu, Richie Soong, Yiqin Wang, Marina Ciullo, Graciela E. Delgado, Olli TRaitakari, Jian-Min Yuan, Melanie Waldenberger, Jiemin Liao, E. Shyong Tai, Mark I. McCarthy, Winfried März, Nilesh J. Samani, Yap Seng Chong, Son TPham, Sarah E. Harris, Regina Courtney, Allan Linneberg, W.H. Wilson Tang, Epidemiology, Ophthalmology, Medical Microbiology & Infectious Diseases, Cardiology, Radiology & Nuclear Medicine, Internal Medicine, Erasmus MC other, Biochemie, Interne Geneeskunde, Toxicogenomics, RS: GROW - Oncology, RS: GROW - R1 - Prevention, Cardiovascular Centre (CVC), Groningen Kidney Center (GKC), Life Course Epidemiology (LCE), Groningen Institute for Gastro Intestinal Genetics and Immunology (3GI), Lifestyle Medicine (LM), Center for Liver, Digestive and Metabolic Diseases (CLDM), and Stem Cell Aging Leukemia and Lymphoma (SALL)
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Male ,Vascular smooth muscle ,Performance ,Research Support, U.S. Gov't, P.H.S ,Genome-wide association study ,Blood Pressure ,Expression ,030204 cardiovascular system & hematology ,VARIANTS ,P.H.S ,genome-wide ,0302 clinical medicine ,Risk Factors ,Natriuretic Peptide, Brain ,Disease ,Non-U.S. Gov't ,CENTRIC ARRAY ,Genetics ,Genetics & Heredity ,Aged, 80 and over ,0303 health sciences ,Research Support, Non-U.S. Gov't ,11 Medical And Health Sciences ,Middle Aged ,REGIONS ,Phenotype ,CpG site ,Cardiovascular Diseases ,CARDIOVASCULAR-DISEASE ,DNA methylation ,BIOS-consortium ,Regression Analysis ,Female ,Life Sciences & Biomedicine ,Adult ,PULMONARY ARTERIAL-HYPERTENSION ,Genotype ,Population ,Single-nucleotide polymorphism ,Biology ,Research Support ,ta3111 ,Polymorphism, Single Nucleotide ,White People ,Article ,N.I.H ,03 medical and health sciences ,KIDNEY ,Asian People ,Research Support, N.I.H., Extramural ,Journal Article ,Humans ,Genetic Predisposition to Disease ,Gene ,METAANALYSIS ,030304 developmental biology ,Aged ,Science & Technology ,CARDIo GRAMplusCD ,ta1184 ,Extramural ,Genetic Variation ,InterAct Consortium ,06 Biological Sciences ,DNA Methylation ,ta3121 ,Peptide Fragments ,INDIVIDUALS ,Blood pressure ,Genetic Loci ,TISSUE ,RISK-FACTORS ,U.S. Gov't ,LifeLines Cohort Study ,Developmental Biology ,Genome-Wide Association Study - Abstract
We carried out a trans-ancestry genome-wide association and replication study of blood pressure phenotypes among up to 320,251 individuals of East Asian, European and South Asian ancestry. We find genetic variants at 12 new loci to be associated with blood pressure (P = 3.9 x 10(-11) to 5.0 x 10(-21)). The sentinel blood pressure SNPs are enriched for association with DNA methylation at multiple nearby CpG sites, suggesting that, at some of the loci identified, DNA methylation may lie on the regulatory pathway linking sequence variation to blood pressure. The sentinel SNPs at the 12 new loci point to genes involved in vascular smooth muscle (IGFBP3, KCNK3, PDE3A and PRDM6) and renal (ARHGAP24, OSR1, SLC22A7 and TBX2) function. The new and known genetic variants predict increased left ventricular mass, circulating levels of NT-proBNP, and cardiovascular and all-cause mortality (P = 0.04 to 8.6 x 10(-6)). Our results provide new evidence for the role of DNA methylation in blood pressure regulation.
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- 2015
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49. A comprehensive 1000 Genomes-based genome-wide association meta-analysis of coronary artery disease
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Emmi Tikkanen, Elias Salfati, Majid Nikpay, Sonia S. Anand, Heribert Schunkert, Thomas Quertermous, George Dedoussis, Abbas Dehghan, Evelin Mihailov, Danish Saleheen, Lars Lannfelt, M. De Andrade, Daniel I. Chasman, Stanley L. Hazen, Vilmundur Gudnason, Christopher Grace, Christina Willenborg, Xueli Yang, Paul M. Ridker, Panos Deloukas, Hwang S-J., Eric Boerwinkle, Sekar Kathiresan, Lars Bertram, Kim B-J., Yun Kyoung Kim, Lokki M-L., Philippe M. Frossard, Adil Rasheed, Marc Haber, Alistair S. Hall, Kathleen Stirrups, Daniel J. Rader, Christopher B. Granger, Ingrid B. Borecki, Weihua Zhang, Thomas Meitinger, Liming Qu, Maris Alver, Wei Zhao, Samuli Ripatti, Andres Metspalu, Diego Ardissino, Memon F-U-R., Themistocles L. Assimes, Sebastian M. Armasu, Won H-H., L. A. Cupples, Tõnu Esko, Stephen M. Schwartz, Dongfeng Gu, Alanna C. Morrison, Han B-G., Nancy L. Pedersen, Tom R. Webb, Joachim Thiery, Marcus E. Kleber, Ligui Wang, J W Jukema, Thorsten Kessler, Xiangfeng Lu, Frank Beutner, Alison H. Goodall, Loukianos S. Rallidis, Natalia Pervjakova, Loos Rjf., Stavroula Kanoni, Leanne M. Hall, Patrik K. E. Magnusson, John C. Chambers, Christian Hengstenberg, Svati H. Shah, Olle Melander, Richa Saxena, Markus Perola, Alexandre F.R. Stewart, Jeanette Erdmann, Nadeem Hayyat Mallick, N. R. van Zuydam, Omri Gottesman, Jemma C. Hopewell, Hugh Watkins, John R. Thompson, Carlos Iribarren, Anders Hamsten, Rory Collins, Theodosios Kyriakou, Markus Scholz, Dharambir K. Sanghera, Jie Huang, Julie E. Buring, Christopher J. O'Donnell, Anuj Goel, Lynda M. Rose, Martin Farrall, Albert V. Smith, Lyytikäinen L-P., Winfried März, Muredach P. Reilly, Mary F. Feitosa, Andrew Bjonnes, Stella Trompet, John Danesh, Robert Roberts, Stefan Gustafsson, Christian Gieger, Ian Ford, Lingyao Zeng, Lars Lind, David J. Stott, Erik Ingelsson, Colin N. A. Palmer, Markku S. Nieminen, M Samuel, Annette Peters, Kirsi Auro, Dominique Gauguier, Narinder K. Mehra, Khan Shah Zaman, P. De Vries, Nilesh J. Samani, Inke R. König, Juha Sinisalo, Ilja Demuth, Pekka J. Karhunen, Wolfgang Lieb, Andrew P. Morris, Nora Franceschini, Veikko Salomaa, Robert Clarke, Erwin P. Bottinger, Roberto Elosua, Yingchang Lu, André G. Uitterlinden, Shapour Jalilzadeh, Cecilia M. Lindgren, Shufeng Chen, Terho Lehtimäki, Jaspal S. Kooner, Tamara B. Harris, Stephen E. Epstein, Udo Seedorf, Oscar H. Franco, Pierre Zalloua, King Wai Lau, Iftikhar J. Kullo, Albert Hofman, Christopher P. Nelson, MariaGrazia Franzosi, Ruth McPherson, Epidemiology, Hematology, Internal Medicine, Ophthalmology, and CARDIoGRAMplusC4D Consortium
- Subjects
EXPRESSION ,Genome-wide association study ,Single-nucleotide polymorphism ,HEART-DISEASE ,Coronary Artery Disease ,Biology ,CELL-MIGRATION ,MICE LACKING ,Article ,GENETIC-VARIANTS ,Genetics ,Genetic predisposition ,CARDIoGRAMplusC4D Consortium ,Humans ,1000 Genomes Project ,SUSCEPTIBILITY LOCUS ,IDENTIFIES 13 ,Genetics & Heredity ,RISK ,Science & Technology ,Genome, Human ,Haplotype ,11 Medical And Health Sciences ,06 Biological Sciences ,Genetic architecture ,3. Good health ,Minor allele frequency ,Phenotype ,MYOCARDIAL-INFARCTION ,CARDIOVASCULAR-DISEASE ,Allelic heterogeneity ,Life Sciences & Biomedicine ,Genome-Wide Association Study ,Developmental Biology - Abstract
Existing knowledge of genetic variants affecting risk of coronary artery disease (CAD) is largely based on genome-wide association study (GWAS) analysis of common SNPs. Leveraging phased haplotypes from the 1000 Genomes Project, we report a GWAS meta-analysis of ∼185,000 CAD cases and controls, interrogating 6.7 million common (minor allele frequency (MAF) > 0.05) and 2.7 million low-frequency (0.005 < MAF < 0.05) variants. In addition to confirming most known CAD-associated loci, we identified ten new loci (eight additive and two recessive) that contain candidate causal genes newly implicating biological processes in vessel walls. We observed intralocus allelic heterogeneity but little evidence of low-frequency variants with larger effects and no evidence of synthetic association. Our analysis provides a comprehensive survey of the fine genetic architecture of CAD, showing that genetic susceptibility to this common disease is largely determined by common SNPs of small effect size.
- Published
- 2015
50. Protein Kinase CK2 Is Inhibited by Human Nucleolar Phosphoprotein p140 in an Inositol Hexakisphosphate-dependent Manner
- Author
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Kong-Joo Lee, Yun-Kyoung Kim, Yeon Gyu Yu, and Hyesung Jeon
- Subjects
DNA, Complementary ,animal structures ,Phytic Acid ,Mitogen-activated protein kinase kinase ,Biochemistry ,Catalysis ,Gene Expression Regulation, Enzymologic ,MAP2K7 ,Catalytic Domain ,Humans ,Phosphorylation ,Casein Kinase II ,Protein kinase A ,Molecular Biology ,Cell Proliferation ,Dose-Response Relationship, Drug ,biology ,fungi ,Cyclin-dependent kinase 2 ,Cyclin-dependent kinase 3 ,Caseins ,Nuclear Proteins ,Cell Biology ,Phosphoproteins ,Cell biology ,Gene Expression Regulation ,embryonic structures ,biology.protein ,Cyclin-dependent kinase complex ,Casein kinase 2 ,cGMP-dependent protein kinase ,Cell Division ,Plasmids ,Signal Transduction - Abstract
Protein kinase CK2 is a ubiquitous protein kinase that can phosphorylate various proteins involved in central cellular processes, such as signal transduction, cell division, and proliferation. We have shown that the human nucleolar phosphoprotein p140 (hNopp140) is able to regulate the catalytic activity of CK2. Unphosphorylated hNopp140 and phospho-hNopp140 bind to the regulatory and catalytic subunits of CK2, respectively, and the interaction between hNopp140 and CK2 was prevented by inositol hexakisphosphate (InsP(6)). Phosphorylation of alpha-casein, genimin, or human phosphatidylcholine transfer protein-like protein by CK2 was inhibited by hNopp140, and InsP(6) recovered the suppressed activity of CK2 by hNopp140. These observations indicated that hNopp140 serves as a negative regulator of CK2 and that InsP(6) stimulates the activity of CK2 by blocking the interaction between hNopp140 and CK2.
- Published
- 2006
- Full Text
- View/download PDF
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