121 results on '"Yuki Naito"'
Search Results
2. Efficacy and safety of peppermint oil for the treatment in Japanese patients with irritable bowel syndrome: a prospective, open-label, and single-arm study
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Kei Matsueda, Shin Fukudo, Masayuki Ogishima, Yuki Naito, and Soichiro Nakamura
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Clinical trial ,Herbal medicine ,Irritable bowel syndrome ,Japanese patients ,Peppermint oil ,Rome III criteria ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Abstract Background In Europe, an herbal medicine containing peppermint oil is widely used in patients with irritable bowel syndrome (IBS). In Japan, however, no clinical evidence for peppermint oil in IBS has been established, and it has not been approved as a drug for IBS. Accordingly, we conducted a clinical study to confirm the efficacy and safety of peppermint oil (ZO-Y60) in Japanese patients with IBS. Methods The study was a multi-center, open-label, single-arm, phase 3 trial in Japanese outpatients with IBS aged 17–60 years and diagnosed according to the Rome III criteria. The subjects were treated with an oral capsule of ZO-Y60 three times a day before meals, for four weeks. The efficacy of ZO-Y60 was evaluated using the patient’s global assessment (PtGA), IBS symptom severity score, stool frequency score, stool form score, and physician’s global assessment (PGA). The safety of ZO-Y60 was also assessed. Results Sixty-nine subjects were treated with ZO-Y60. During the four-week administration of ZO-Y60, the improvement rate of the PtGA was 71.6% (48/67) in week 2 and 85.1% (57/67) in week 4. It was also suggested that ZO-Y60 is effective against any type of IBS (IBS with constipation, IBS with diarrhea, and mixed/unsubtyped IBS). The improvement rate of the PGA was 73.1% (49/67) in week 2 and 85.1% (57/67) in week 4, also confirming the efficacy of ZO-Y60. Adverse events were observed in 14 subjects (20.3%), however, none of these adverse events were categorized as serious. Conclusion The efficacy of treatment was confirmed, subjective symptoms were improved, as was observed in previous clinical studies of ZO-Y60 conducted outside of Japan. All adverse reactions were previously known and were non-serious. These findings suggest that peppermint oil may be effective in the Japanese population and that it has an acceptable safety profile. Trial registration JAPIC Clinical Trials Information number: JapicCTI-121727 https://jrct.niph.go.jp/en-latest-detail/jRCT1080221685 . Registration date: 2012–01-10.
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- 2024
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3. Synthesis and Biological Evaluation of a Novel Sugar-Conjugated Platinum(II) Complex Having a Tumor-Targeting Effect
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Marina Omokawa, Hiroyuki Kimura, Kenji Arimitsu, Yusuke Yagi, Yasunao Hattori, Hidekazu Kawashima, Yuki Naito, and Hiroyuki Yasui
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Chemistry ,QD1-999 - Published
- 2023
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4. Synthesis of piperidine and pyrrolidine derivatives by electroreductive cyclization of imine with terminal dihaloalkanes in a flow microreactor
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Yuki Naito, Naoki Shida, and Mahito Atobe
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electrochemical synthesis ,electrocyclization ,flow microreactor ,heterocyclic amines ,imine ,Science ,Organic chemistry ,QD241-441 - Abstract
We have successfully synthesized piperidine and pyrrolidine derivatives by electroreductive cyclization using readily available imine and terminal dihaloalkanes in a flow microreactor. Reduction of the substrate imine on the cathode proceeded efficiently due to the large specific surface area of the microreactor. This method provided target compounds in good yields compared to a conventional batch-type reaction. Furthermore, piperidine and pyrrolidine derivatives could be obtained on preparative scale by continuous electrolysis for approximately 1 hour.
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- 2022
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5. Cardiopulmonary arrest caused by nafamostat mesylate during hemodialysis
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Nobuki Shioya, Nozomu Inoue, Hiroki Sato, Motoko Iwahara, Tomohiro Sato, Yuki Tsukamoto, Yuki Naito, Kohji Hazama, and Yasuo Shichinohe
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and anaphylaxis ,cardiopulmonary arrest ,dialysis‐related adverse reactions ,hemodialysis ,nafamostat mesylate ,Medicine ,Medicine (General) ,R5-920 - Abstract
Abstract Dialysis‐related adverse reactions can be serious and difficult to predict. In our case, nafamostat mesylate (NM) was thought to be the cause of cardiopulmonary arrest (CPA) due to NM‐induced anaphylaxis but was not reflected in the allergy tests. Rare but life‐threatening drawbacks occur immediately after hemodialysis initiation.
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- 2022
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6. CRISPR-Cas3 induces broad and unidirectional genome editing in human cells
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Hiroyuki Morisaka, Kazuto Yoshimi, Yuya Okuzaki, Peter Gee, Yayoi Kunihiro, Ekasit Sonpho, Huaigeng Xu, Noriko Sasakawa, Yuki Naito, Shinichiro Nakada, Takashi Yamamoto, Shigetoshi Sano, Akitsu Hotta, Junji Takeda, and Tomoji Mashimo
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Science - Abstract
Class 1 CRISPR systems are not as developed for genome editing as Class 2 systems are. Here the authors show that Cas3 can be used to generate functional knockouts and knock-ins, as well as Cas3-mediated exon-skipping in DMD cells.
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- 2019
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7. Assessment of the local clonal spread of Streptococcus pneumoniae serotype 12F caused invasive pneumococcal diseases among children and adults
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Noriko Nakanishi, Takeshi Yonezawa, Shinobu Tanaka, Yuki Shirouzu, Yuki Naito, Akemi Ozaki, Natsuki Hama, Akihiro Ijichi, Tomotada Iwamoto, and Ryohei Nomoto
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Infectious and parasitic diseases ,RC109-216 ,Public aspects of medicine ,RA1-1270 - Abstract
Background: We conducted active surveillance to elucidate the distribution of Streptococcus pneumoniae serotypes causing invasive pneumococcal disease (IPD) and clarified the genetic relatedness among the isolates in Kobe City, Japan. Methods: Forty-five IPD-causing S. pneumoniae strains were analyzed from March 2016 to May 2018 through active surveillance in Kobe City, Hyogo, Japan. Serotypes were determined by multiplex serotyping PCR and the Quellung reaction with pneumococcal antisera. Fourteen Sp12F strains were subjected to whole-genome sequencing (WGS). Results: Among 45 isolates, the most frequent serotypes were 12F (n = 14, 31%), 24F (n = 5, 11%), and 10A (n = 4, 9%). Multilocus sequence typing (MLST) analysis of 14 isolates of Sp12F divided them into ST4846 (n = 4) and ST6495 (n = 10). WGS showed clonality of the 10 isolates of ST6495, with only 13 single nucleotide polymorphisms in the genomes. Meanwhile, ST4846 strains in Kobe differed from only the outbreak strains of Sp12F ST4846 in Tsuruoka, Japan, reported on 2018. Conclusions: Serotype monitoring showed Sp12F to be the predominant serotype in Kobe, and WGS revealed the clonal spread of Sp12F ST6495 in this city. Thus, the spread of Sp12F could become a serious public health problem in Japan, warranting thorough monitoring in future. Keywords: Streptococcus pneumoniae, Serotype, Sp12F, Whole-genome sequencing, Single nucleotide polymorphism
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- 2019
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8. Intentional or unintentional drug poisoning in elderly people: retrospective observational study in a tertiary care hospital in Japan
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Takeshi Haoka, Nobuo Sakata, Hiroyuki Okamoto, Akiko Oshiro, Takafumi Shimizu, Yuki Naito, Shinsuke Onishi, Yuka Morishita, and Satoshi Nara
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Benzodiazepine receptor agonist ,drug poisoning ,geriatric ,hospitalization ,intention ,Medical emergencies. Critical care. Intensive care. First aid ,RC86-88.9 - Abstract
Aim Intentional or unintentional acute drug poisoning occurs even in elderly people, but little is known about the factors influencing the intention to poisoning. A retrospective study was undertaken to describe the characteristics of acute drug poisoning in elderly people according to whether the poisoning was intentional or unintentional and the responsible agents. Methods The study was carried out in a single tertiary hospital in Japan. A total of 145 patients aged ≥65 years who were transferred by an ambulance service and were diagnosed with acute drug poisoning were included. Medical records were used to collect information on the intention behind poisoning and the responsible agents. Patients were divided into two groups according to whether they experienced intentional or unintentional poisoning and were further classified according to the responsible agent. Multivariable logistic regression models were used to estimate the association between hospitalization for acute drug poisoning and the use of benzodiazepine receptor agonists (BzRAs). Results Poisoning was unintentional in 102 (70.3%) patients and intentional in 43 (29.7%) patients. In total, 65 (44.8%) patients required hospitalization. Among patients in the unintentional poisoning group, those using non‐BzRAs were more likely to be hospitalized than those using BzRAs (odds ratio, 6.64; 95% confidence interval, 2.56–17.22). The length of hospital stay was significantly longer in the unintentional poisoning group than in the intentional poisoning group (13.9 vs. 6.2 days; P = 0.013). Conclusions The proportion of unintentional poisoning in the elderly is high, and particularly with respect to poisoning with non‐BzRAs, the hospitalization rates are high.
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- 2019
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9. BioHackathon 2015: Semantics of data for life sciences and reproducible research [version 1; peer review: 2 approved]
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Rutger A. Vos, Toshiaki Katayama, Hiroyuki Mishima, Shin Kawano, Shuichi Kawashima, Jin-Dong Kim, Yuki Moriya, Toshiaki Tokimatsu, Atsuko Yamaguchi, Yasunori Yamamoto, Hongyan Wu, Peter Amstutz, Erick Antezana, Nobuyuki P. Aoki, Kazuharu Arakawa, Jerven T. Bolleman, Evan Bolton, Raoul J. P. Bonnal, Hidemasa Bono, Kees Burger, Hirokazu Chiba, Kevin B. Cohen, Eric W. Deutsch, Jesualdo T. Fernández-Breis, Gang Fu, Takatomo Fujisawa, Atsushi Fukushima, Alexander García, Naohisa Goto, Tudor Groza, Colin Hercus, Robert Hoehndorf, Kotone Itaya, Nick Juty, Takeshi Kawashima, Jee-Hyub Kim, Akira R. Kinjo, Masaaki Kotera, Kouji Kozaki, Sadahiro Kumagai, Tatsuya Kushida, Thomas Lütteke, Masaaki Matsubara, Joe Miyamoto, Attayeb Mohsen, Hiroshi Mori, Yuki Naito, Takeru Nakazato, Jeremy Nguyen-Xuan, Kozo Nishida, Naoki Nishida, Hiroyo Nishide, Soichi Ogishima, Tazro Ohta, Shujiro Okuda, Benedict Paten, Jean-Luc Perret, Philip Prathipati, Pjotr Prins, Núria Queralt-Rosinach, Daisuke Shinmachi, Shinya Suzuki, Tsuyosi Tabata, Terue Takatsuki, Kieron Taylor, Mark Thompson, Ikuo Uchiyama, Bruno Vieira, Chih-Hsuan Wei, Mark Wilkinson, Issaku Yamada, Ryota Yamanaka, Kazutoshi Yoshitake, Akiyasu C. Yoshizawa, Michel Dumontier, Kenjiro Kosaki, and Toshihisa Takagi
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Medicine ,Science - Abstract
We report on the activities of the 2015 edition of the BioHackathon, an annual event that brings together researchers and developers from around the world to develop tools and technologies that promote the reusability of biological data. We discuss issues surrounding the representation, publication, integration, mining and reuse of biological data and metadata across a wide range of biomedical data types of relevance for the life sciences, including chemistry, genotypes and phenotypes, orthology and phylogeny, proteomics, genomics, glycomics, and metabolomics. We describe our progress to address ongoing challenges to the reusability and reproducibility of research results, and identify outstanding issues that continue to impede the progress of bioinformatics research. We share our perspective on the state of the art, continued challenges, and goals for future research and development for the life sciences Semantic Web.
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- 2020
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10. E-cadherin is transcriptionally activated via suppression of ZEB1 transcriptional repressor by small RNA-mediated gene silencing.
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Minami Mazda, Kenji Nishi, Yuki Naito, and Kumiko Ui-Tei
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Medicine ,Science - Abstract
RNA activation has been reported to be induced by small interfering RNAs (siRNAs) that act on the promoters of several genes containing E-cadherin. In this study, we present an alternative mechanism of E-cadherin activation in human PC-3 cells by siRNAs previously reported to possess perfect-complementary sequences to E-cadherin promoter. We found that activation of E-cadherin can be also induced via suppression of ZEB1, which is a transcriptional repressor of E-cadherin, by seed-dependent silencing mechanism of these siRNAs. The functional seed-complementary sites of the siRNAs were found in the coding region in addition to the 3' untranslated region of ZEB1 mRNA. Promoter analyses indicated that E-boxes, which are ZEB1-binding sites, in the upstream promoter region are indispensable for E-cadherin transcription by the siRNAs. Thus, the results caution against ignoring siRNA seed-dependent silencing effects in genome-wide transcriptional regulation. In addition, members of miR-302/372/373/520 family, which have the same seed sequences with one of the siRNAs containing perfect-complementarity to E-cadherin promoter, are also found to activate E-cadherin transcription. Thus, E-cadherin could be upregulated by the suppression of ZEB1 transcriptional repressor by miRNAs in vivo.
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- 2011
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11. Quantum Query Lower Bounds for Key Recovery Attacks on the Even-Mansour Cipher.
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Akinori Kawachi and Yuki Naito
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- 2023
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12. EFFECT OF RETARDER ON MORTAR HYDRATION AND MICROSTRUCTURE IN HIGH TEMPERATURE ENVIRONMENT
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Yukiko NISHIOKA, Tetsurou MATSUSHITA, Masarou KOJIMA, and Yuki NAITO
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General Medicine - Published
- 2022
13. Bayesian optimization with constraint on passed charge for multiparameter screening of electrochemical reductive carboxylation in a flow microreactor
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Yuki Naito, Masaru Kondo, Yuto Nakamura, Naoki Shida, Kazunori Ishikawa, Takashi Washio, Shinobu Takizawa, and Mahito Atobe
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Materials Chemistry ,Metals and Alloys ,Ceramics and Composites ,General Chemistry ,Catalysis ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials - Abstract
Multiparameter screening of reductive carboxylation in an electrochemical flow microreactor was performed using a Bayesian optimization (BO) strategy. The developed algorithm features a constraint on passed charge for the electrochemical reaction, which led to suitable conditions being instantaneously found for the desired reaction. Analysis of the BO-suggested conditions underscored the physicochemical validity.
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- 2022
14. Hardware-aware model of sigma-delta cellular neural network.
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Hisashi Aomori, Yuki Naito, Tsuyoshi Otake, Nobuaki Takahashi, Ichiro Matsuda, Susumu Itoh, and Mamoru Tanaka
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- 2009
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15. Integrated Flow Synthesis of α-Amino Acids by In Situ Generation of Aldimines and Subsequent Electrochemical Carboxylation
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Naoki Shida, Kenta Tanaka, Yuki Naito, Yuto Nakamura, Hisanori Senboku, and Mahito Atobe
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chemistry.chemical_classification ,Aldimine ,010405 organic chemistry ,Chemistry ,Cyanide ,Organic Chemistry ,010402 general chemistry ,Electrochemistry ,Molecular sieve ,01 natural sciences ,Combinatorial chemistry ,0104 chemical sciences ,Amino acid ,chemistry.chemical_compound ,Carboxylation ,Reagent ,Microreactor - Abstract
The synthesis of α-amino acids was carried out in a continuous flow system. In this system, aldimines were efficiently generated in situ via the dehydration-condensation of aldehydes with anilines in a desiccant bed column filled with 4 A molecular sieves desiccant, followed by reaction with CO2 in an electrochemical flow microreactor to afford the α-amino acids in high to moderate yields. The present system can provide α-amino acids without using stoichiometric amounts of metal reagents or highly toxic cyanide reagents.
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- 2021
16. Syntheses of Cu(II), Ni(II), and Zn(II) complexes with 2-acetylpyrazine N(4)-phenylthiosemicarbazone and evaluation of their antidiabetic eff ects.
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Chihiro Tanaka, Yuki Naito, Yutaka Yoshikawa, and Hiroyuki Yasui
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HYPOGLYCEMIC agents ,METAL complexes ,BLOOD sugar monitoring ,ALANINE aminotransferase ,THIOSEMICARBAZONES ,TYPE 2 diabetes treatment - Abstract
The increasing number of patients with diabetes has recently become a serious problem following changes in diet and lifestyle. Various drugs are used to treat diabetes; however, there are serious concerns regarding their physical and mental side eff ects. Zinc, copper, and nickel are trace elements present in the body that are known to have insulin-like eff ects although nickel is not essential to mammals. Here, we focused on metal complexes with the 2-acetylpyrazine N(4)-phenylthiosemicarbazone (2-APTC) ligand, which has a six-coordinate octahedral structure with an S
2 N4 -type coordination mode. For single oral administration experiments, [Zn(2-APTC)2 ], zinc sulfate (10 mg Zn/kg) and [Cu(2- APTC)2 ], and copper sulfate (3 mg Cu/kg) were orally administered to 5-week-old ddy mice fasted for 12 h. Moreover, of [Zn(2-APTC)2 ] was administered daily to KK-Ay mice, a type 2 diabetes model. In a single oral administration experiment, [Zn(2-APTC)2 ] showed a signifi cant increase in plasma zinc concentration compared to zinc sulfate. Moreover, the 28-d administration of [Zn(2-APTC)2 ] resulted in a signifi cant decrease in the blood glucose level. This suggests that [Zn(2-APTC)2 ] has a higher absorption of the complexes than [Cu(2-APTC)2 ] after oral administration and is expected to have more antidiabetic activity. However, blood urea nitrogen, aspartate aminotransferase, and alanine transaminase levels increased, suggesting that [Zn(2-APTC)2 ] administration aff ects liver and kidney functions. Moreover, hematoxylin and eosin staining showed that [Zn(2-APTC)2 ] ameliorated fatty liver and exerted antidiabetic eff ects. Here, we report for the fi rst time that a zinc complex with a six-coordinated octahedral structure, with 2-APTC as a ligand, exhibits antidiabetic eff ects. [ABSTRACT FROM AUTHOR]- Published
- 2023
17. Ontology-Based Medical Information Service System.
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Hirokazu Taki, Noriyuki Matsuda, Michiyasu Hiramatsu, Yuki Naito, Jiro Nakajima, Tadashi Nakamura, Akihisa Imagawa, Yuji Matsuzawa, Norihiro Abe, and Satoshi Hori
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- 2003
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18. TogoID: an exploratory ID converter to bridge biological datasets
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Shuya Ikeda, Hiromasa Ono, Tazro Ohta, Hirokazu Chiba, Yuki Naito, Yuki Moriya, Shuichi Kawashima, Yasunori Yamamoto, Shinobu Okamoto, Susumu Goto, and Toshiaki Katayama
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Statistics and Probability ,Computational Mathematics ,Computational Theory and Mathematics ,Databases, Factual ,Molecular Biology ,Biochemistry ,Software ,Computer Science Applications ,Data Management - Abstract
Motivation Understanding life cannot be accomplished without making full use of biological data, which are scattered across databases of diverse categories in life sciences. To connect such data seamlessly, identifier (ID) conversion plays a key role. However, existing ID conversion services have disadvantages, such as covering only a limited range of biological categories of databases, not keeping up with the updates of the original databases and outputs being hard to interpret in the context of biological relations, especially when converting IDs in multiple steps. Results TogoID is an ID conversion service implementing unique features with an intuitive web interface and an application programming interface (API) for programmatic access. TogoID currently supports 65 datasets covering various biological categories. TogoID users can perform exploratory multistep conversions to find a path among IDs. To guide the interpretation of biological meanings in the conversions, we crafted an ontology that defines the semantics of the dataset relations. Availability and implementation The TogoID service is freely available on the TogoID website (https://togoid.dbcls.jp/) and the API is also provided to allow programmatic access. To encourage developers to add new dataset pairs, the system stores the configurations of pairs at the GitHub repository (https://github.com/togoid/togoid-config) and accepts the request of additional pairs. Supplementary information Supplementary data are available at Bioinformatics online.
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- 2022
19. Reduction in minute alveolar ventilation causes hypercapnia in ventilated neonates with respiratory distress
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Takuyo Kanayama, Kazumasa Kitamura, Yuki Naito, Utsuki Matsumura, Masashi Zuiki, Hiroshi Komatsu, and Shinichiro Tsurukawa
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Respiratory rate ,Dead space ,Hypercapnia ,03 medical and health sciences ,Neonatal intensive care unit ,0302 clinical medicine ,030225 pediatrics ,Tidal Volume ,Alveolar ventilation ,Humans ,Medicine ,030212 general & internal medicine ,Normocapnia ,Alveolar dead space ,Tidal volume ,Physiological dead space ,Respiratory Distress Syndrome ,Respiratory distress ,business.industry ,Infant ,Gestational age ,Respiratory Dead Space ,Carbon Dioxide ,Respiration, Artificial ,respiratory tract diseases ,Anesthesia ,Pediatrics, Perinatology and Child Health ,Original Article ,Volumetric capnography ,medicine.symptom ,business ,Respiratory minute volume ,circulatory and respiratory physiology - Abstract
Hypercapnia occurs in ventilated infants even if tidal volume (VT) and minute ventilation (VE) are maintained. We hypothesised that increased physiological dead space (Vd,phys) caused decreased minute alveolar ventilation (VA; alveolar ventilation (VA) × respiratory rate) in well-ventilated infants with hypercapnia. We investigated the relationship between dead space and partial pressure of carbon dioxide (PaCO2) and assessed VA. Intubated infants (n = 33; mean birth weight, 2257 ± 641 g; mean gestational age, 35.0 ± 3.3 weeks) were enrolled. We performed volumetric capnography (Vcap), and calculated Vd,phys and VA when arterial blood sampling was necessary. PaCO2 was positively correlated with alveolar dead space (Vd,alv) (r = 0.54, p < 0.001) and Vd,phys (r = 0.48, p < 0.001), but not Fowler dead space (r = 0.14, p = 0.12). Normocapnia (82 measurements; 35 mmHg ≤ PaCO2 < 45 mmHg) and hypercapnia groups (57 measurements; 45 mmHg ≤ PaCO2) were classified. The hypercapnia group had higher Vd,phys (median 0.57 (IQR, 0.44-0.67)) than the normocapnia group (median Vd,phys/VT = 0.46 (IQR, 0.37-0.58)], with no difference in VT. The hypercapnia group had lower VA (123 (IQR, 87-166) ml/kg/min) than the normocapnia group (151 (IQR, 115-180) ml/kg/min), with no difference in VE.Conclusion: Reduction of VA in well-ventilated neonates induces hypercapnia, caused by an increase in Vd,phys. What is Known: • Volumetric capnography based on ventilator graphics and capnograms is a useful tool in determining physiological dead space of ventilated infants and investigating the cause of hypercapnia. What is New: • This study adds evidence that reduction in minute alveolar ventilation causes hypercapnia in ventilated neonates.
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- 2020
20. Technical considerations in Hi-C scaffolding and evaluation of chromosome-scale genome assemblies
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Yuta Ohishi, Shigehiro Kuraku, Kazuaki Yamaguchi, Osamu Nishimura, Yuki Naito, and Mitsutaka Kadota
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Paroedura picta ,Scaffold ,Genome ,Computer science ,Genome sequence assembly ,Scale (chemistry) ,Computational biology ,Genomics ,Biology ,Pipeline (software) ,Chromatin ,Chromosomes ,Chromosome conformation capture ,Chromosome (genetic algorithm) ,Genetics ,Madagascar ,Animals ,Ecology, Evolution, Behavior and Systematics ,Genome scaffolding - Abstract
The recent development of ecological studies has been fueled by the introduction of massive information based on chromosome-scale genome sequences, even for species for which genetic linkage is not accessible. This was enabled mainly by the application of Hi-C, a method for genome-wide chromosome conformation capture that was originally developed for investigating the long-range interaction of chromatins. Performing genomic scaffolding using Hi-C data is highly resource-demanding and employs elaborate laboratory steps for sample preparation. It starts with building a primary genome sequence assembly as an input, which is followed by computation for genome scaffolding using Hi-C data, requiring careful validation. This article presents technical considerations for obtaining optimal Hi-C scaffolding results and provides a test case of its application to a reptile species, the Madagascar ground gecko (Paroedura picta). Among the metrics that are frequently used for evaluating scaffolding results, we investigate the validity of the completeness assessment of chromosome-scale genome assemblies using single-copy reference orthologs, and report problems of the widely used program pipeline BUSCO.
- Published
- 2021
21. Integrated Flow Synthesis of α-Amino Acids by
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Yuki, Naito, Yuto, Nakamura, Naoki, Shida, Hisanori, Senboku, Kenta, Tanaka, and Mahito, Atobe
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Aldehydes ,Indicators and Reagents ,Amino Acids - Abstract
The synthesis of α-amino acids was carried out in a continuous flow system. In this system, aldimines were efficiently generated
- Published
- 2021
22. Evaluation of off‐target effects of gapmer antisense oligonucleotides using human cells
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Satoshi Obika, Hideya Kawaji, Yuki Naito, Kiyomi Sasaki, Jun Kawai, Mikihiko Naito, Takao Inoue, Hidenori Yasuhara, Tokuyuki Yoshida, and Haruhiro Okuda
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Candidate gene ,Base Pair Mismatch ,RNase P ,antisense ,In silico ,Computational biology ,Biology ,03 medical and health sciences ,Cell Line, Tumor ,pre‐mRNA ,Genetics ,Humans ,Base Pairing ,Gene ,030304 developmental biology ,off‐target effects ,0303 health sciences ,Sequence Analysis, RNA ,Microarray analysis techniques ,Gapmer ,RNA ,Original Articles ,Cell Biology ,Oligonucleotides, Antisense ,In vitro ,Original Article ,microarray analysis ,Precursor mRNA ,Algorithms - Abstract
Antisense oligonucleotide (ASO) has the potential to induce off‐target effects due to complementary binding between the ASO and unintended RNA with a sequence similar to the target RNA. Conventional animal studies cannot be used to assess toxicity induced by off‐target effects because of differences in the genome sequence between humans and other animals. Consequently, the assessment of off‐target effects with in silico analysis using a human RNA database and/or in vitro expression analysis using human cells has been proposed. Our previous study showed that the number of complementary regions of ASOs with mismatches in the human RNA sequences increases dramatically as the number of tolerated mismatches increases. However, to what extent the expression of genes with mismatches is affected by off‐target effects at the cellular level is not clear. In this study, we evaluated off‐target effects of gapmer ASOs, which cleave the target RNA in an RNase H‐dependent manner, by introducing the ASO into human cells and performing microarray analysis. Our data indicate that gapmer ASOs induce off‐target effects depending on the degree of complementarity between the ASO and off‐target candidate genes. Based on our results, we also propose a scheme for the assessment of off‐target effects of gapmer ASOs., We showed that gapmer oligonucleotide (ASO) induce off‐target effects depending on the degree of complementarity between the ASO and off‐target candidate genes. Based on our results, we also proposed a scheme for the assessment of off‐target effects of gapmer ASOs.
- Published
- 2019
23. Assessment of the local clonal spread of Streptococcus pneumoniae serotype 12F caused invasive pneumococcal diseases among children and adults
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Akemi Ozaki, Akihiro Ijichi, Yuki Shirouzu, Noriko Nakanishi, Takeshi Yonezawa, Natsuki Hama, Tomotada Iwamoto, Yuki Naito, Shinobu Tanaka, and Ryohei Nomoto
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0301 basic medicine ,Serotype ,Adult ,Male ,Streptococcus pneumoniae serotype ,Pneumococcal disease ,Adolescent ,Genotype ,030106 microbiology ,Single-nucleotide polymorphism ,Bacteremia ,Biology ,medicine.disease_cause ,Serogroup ,Pneumococcal Infections ,Meningitis, Bacterial ,lcsh:Infectious and parasitic diseases ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Japan ,Streptococcus pneumoniae ,medicine ,Humans ,lcsh:RC109-216 ,030212 general & internal medicine ,Serotyping ,Child ,Aged ,Aged, 80 and over ,Molecular Epidemiology ,lcsh:Public aspects of medicine ,Public Health, Environmental and Occupational Health ,Infant, Newborn ,Outbreak ,Infant ,lcsh:RA1-1270 ,General Medicine ,Middle Aged ,Virology ,Infectious Diseases ,Child, Preschool ,Multilocus sequence typing ,Female ,Quellung reaction ,Multilocus Sequence Typing - Abstract
Background: We conducted active surveillance to elucidate the distribution of Streptococcus pneumoniae serotypes causing invasive pneumococcal disease (IPD) and clarified the genetic relatedness among the isolates in Kobe City, Japan. Methods: Forty-five IPD-causing S. pneumoniae strains were analyzed from March 2016 to May 2018 through active surveillance in Kobe City, Hyogo, Japan. Serotypes were determined by multiplex serotyping PCR and the Quellung reaction with pneumococcal antisera. Fourteen Sp12F strains were subjected to whole-genome sequencing (WGS). Results: Among 45 isolates, the most frequent serotypes were 12F (n = 14, 31%), 24F (n = 5, 11%), and 10A (n = 4, 9%). Multilocus sequence typing (MLST) analysis of 14 isolates of Sp12F divided them into ST4846 (n = 4) and ST6495 (n = 10). WGS showed clonality of the 10 isolates of ST6495, with only 13 single nucleotide polymorphisms in the genomes. Meanwhile, ST4846 strains in Kobe differed from only the outbreak strains of Sp12F ST4846 in Tsuruoka, Japan, reported on 2018. Conclusions: Serotype monitoring showed Sp12F to be the predominant serotype in Kobe, and WGS revealed the clonal spread of Sp12F ST6495 in this city. Thus, the spread of Sp12F could become a serious public health problem in Japan, warranting thorough monitoring in future. Keywords: Streptococcus pneumoniae, Serotype, Sp12F, Whole-genome sequencing, Single nucleotide polymorphism
- Published
- 2019
24. Intentional or unintentional drug poisoning in elderly people: retrospective observational study in a tertiary care hospital in Japan
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Yuka Morishita, Shinsuke Onishi, Akiko Oshiro, Yuki Naito, Nobuo Sakata, Satoshi Nara, Takafumi Shimizu, Hiroyuki Okamoto, and Takeshi Haoka
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medicine.medical_specialty ,geriatric ,Poison control ,030204 cardiovascular system & hematology ,Suicide prevention ,Occupational safety and health ,03 medical and health sciences ,0302 clinical medicine ,Injury prevention ,Medicine ,030212 general & internal medicine ,drug poisoning ,Benzodiazepine receptor agonist ,RC86-88.9 ,business.industry ,Medical record ,General Engineering ,Human factors and ergonomics ,Medical emergencies. Critical care. Intensive care. First aid ,Retrospective cohort study ,Original Articles ,Odds ratio ,intention ,Emergency medicine ,Original Article ,business ,hospitalization - Abstract
Aim Intentional or unintentional acute drug poisoning occurs even in elderly people, but little is known about the factors influencing the intention to poisoning. A retrospective study was undertaken to describe the characteristics of acute drug poisoning in elderly people according to whether the poisoning was intentional or unintentional and the responsible agents. Methods The study was carried out in a single tertiary hospital in Japan. A total of 145 patients aged ≥65 years who were transferred by an ambulance service and were diagnosed with acute drug poisoning were included. Medical records were used to collect information on the intention behind poisoning and the responsible agents. Patients were divided into two groups according to whether they experienced intentional or unintentional poisoning and were further classified according to the responsible agent. Multivariable logistic regression models were used to estimate the association between hospitalization for acute drug poisoning and the use of benzodiazepine receptor agonists (BzRAs). Results Poisoning was unintentional in 102 (70.3%) patients and intentional in 43 (29.7%) patients. In total, 65 (44.8%) patients required hospitalization. Among patients in the unintentional poisoning group, those using non-BzRAs were more likely to be hospitalized than those using BzRAs (odds ratio, 6.64; 95% confidence interval, 2.56-17.22). The length of hospital stay was significantly longer in the unintentional poisoning group than in the intentional poisoning group (13.9 vs. 6.2 days; P = 0.013). Conclusions The proportion of unintentional poisoning in the elderly is high, and particularly with respect to poisoning with non-BzRAs, the hospitalization rates are high.
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- 2019
25. In Vivo Effect of Bis(Maltolato)Zinc(II) Complex on Akt Phosphorylation in Adipose Tissues of Mice
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Hiroyuki Yasui, Yutaka Yoshikawa, Hiroaki Yamamoto, and Yuki Naito
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Male ,medicine.medical_specialty ,Endocrinology, Diabetes and Metabolism ,Clinical Biochemistry ,chemistry.chemical_element ,Adipose tissue ,Zinc ,010501 environmental sciences ,01 natural sciences ,Biochemistry ,Inorganic Chemistry ,Mice ,Structure-Activity Relationship ,03 medical and health sciences ,In vivo ,Internal medicine ,Diabetes mellitus ,Organometallic Compounds ,medicine ,Animals ,Tissue Distribution ,Phosphorylation ,Glycogen synthase ,0105 earth and related environmental sciences ,Mice, Inbred ICR ,0303 health sciences ,Dose-Response Relationship, Drug ,Molecular Structure ,biology ,030302 biochemistry & molecular biology ,Biochemistry (medical) ,Skeletal muscle ,General Medicine ,medicine.disease ,Bioavailability ,medicine.anatomical_structure ,Endocrinology ,Adipose Tissue ,chemistry ,Isoflurane ,biology.protein ,Proto-Oncogene Proteins c-akt ,medicine.drug - Abstract
The risk of serious complication gradually increases as diabetes mellitus (DM) progresses. Thus, strategies for the prevention and delay of symptom progression are urgently needed. Previously, we synthesized zinc (Zn) complexes estimated to have a high bioavailability and evaluated their insulin-like anti-DM effects. However, in vivo studies of the effects of Zn compounds on the insulin signaling pathway and the molecular mechanisms underlying the anti-diabetic activities of Zn complexes were unresolved. In this study, we evaluated the effect of bis(maltolato)zinc(II) complex [Zn(mal)2] on male ICR mice (6-week-old) that received intraperitoneal (i.p.) injection of [Zn(mal)2]. The liver, skeletal muscle, and adipose tissues were collected from mice under anesthesia with isoflurane 40 or 90 min after i.p. injection. The [Zn(mal)2]-treatment did not affect Akt phosphorylation in the liver or skeletal muscle. In contrast, in adipose tissues, [Zn(mal)2]-treatment showed increased Akt phosphorylation at 40 min and 90 min after injection (p
- Published
- 2019
26. Practical guide for obtaining and validating chromosome-scale genome assemblies with Hi-C scaffolding
- Author
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Mitsutaka Kadota, Shigehiro Kuraku, Osamu Nishimura, Kazuaki Yamaguchi, Yuki Naito, and Yuta Ohishi
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Paroedura picta ,Chromosome conformation capture ,Scaffold ,Chromosome (genetic algorithm) ,Computer science ,Computational biology ,Scale (map) ,Genome ,Pipeline (software) ,Genome scaffolding - Abstract
Recent development of ecological studies has been fueled by the introduction of massive information based on chromosome-scale genome sequences, even for species whose genetic linkage was previously not accessible. This was enabled mainly by the application of Hi-C, a method for genome-wide chromosome conformation capture which was originally developed for investigating long-range interaction of chromatins. Performing genomic scaffolding using Hi-C data is highly resource-demanding in elaborate laboratory steps for sequencing sample preparation, building primary genome sequence assembly as an input, and computation for genome scaffolding using Hi-C data, followed by careful validation. This article summarizes existing solutions for these steps and provides a test case of its application to a reptile species, the Madagascar ground gecko (Paroedura picta). Among frequently exerted metrics for evaluating scaffolding results, we investigate the validity of completeness assessment using single-copy reference orthologs and report problems with the widely used program pipeline BUSCO.
- Published
- 2021
27. BioHackathon 2015: Semantics of data for life sciences and reproducible research
- Author
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Takatomo Fujisawa, Shujiro Okuda, Rutger A. Vos, Yuki Naito, Benedict Paten, Toshihisa Takagi, Atsushi Fukushima, Issaku Yamada, Kouji Kozaki, Atsuko Yamaguchi, Shin Kawano, Jeremy Nguyen-Xuan, Toshiaki Katayama, Tudor Groza, Takeru Nakazato, Tazro Ohta, Toshiaki Tokimatsu, Akira R. Kinjo, Tsuyosi Tabata, Bruno Vieira, Kotone Itaya, Eric W. Deutsch, Evan E Bolton, Kenjiro Kosaki, Yasunori Yamamoto, Sadahiro Kumagai, Soichi Ogishima, Pjotr Prins, Mark Wilkinson, Núria Queralt-Rosinach, Colin Hercus, Philip Prathipati, Alexander Garcia, Hidemasa Bono, Shuichi Kawashima, Jerven Bolleman, Yuki Moriya, Chih-Hsuan Wei, Ryota Yamanaka, Masaaki Matsubara, Akiyasu C. Yoshizawa, Jesualdo Tomás Fernández-Breis, Naoki Nishida, Thomas Lütteke, Hiroyo Nishide, Jin-Dong Kim, Kees Burger, Kevin Bretonnel Cohen, Nobuyuki P. Aoki, Kozo Nishida, Joe Miyamoto, Michel Dumontier, Robert Hoehndorf, Attayeb Mohsen, Peter Amstutz, Nick Juty, Raoul J. P. Bonnal, Kieron Taylor, Hiroyuki Mishima, Naohisa Goto, Masaaki Kotera, Tatsuya Kushida, Hiroshi Mori, Ikuo Uchiyama, Takeshi Kawashima, Kazutoshi Yoshitake, Jean-Luc Perret, Kazuharu Arakawa, Jee-Hyub Kim, Daisuke Shinmachi, Shinya Suzuki, Mark Thompson, Terue Takatsuki, Erick Antezana, Hongyan Wu, Gang Fu, Hirokazu Chiba, Institute of Data Science, RS: FSE Studio Europa Maastricht, and RS: FSE DACS IDS
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0301 basic medicine ,Computer science ,Bioinformatics ,Clinical Sciences ,Oncology and Carcinogenesis ,Ontology (information science) ,computer.software_genre ,Semantics ,General Biochemistry, Genetics and Molecular Biology ,Biological Science Disciplines ,Workflows ,03 medical and health sciences ,Databases ,0302 clinical medicine ,Web Services ,Genetics ,Data Mining ,General Pharmacology, Toxicology and Pharmaceutics ,Semantic Web ,Visualization ,Biological data ,Metadata ,General Immunology and Microbiology ,Ontology ,Computational Biology ,Reproducibility of Results ,Articles ,General Medicine ,Linked data ,Opinion Article ,Data science ,030104 developmental biology ,Workflow ,Networking and Information Technology R&D (NITRD) ,BioHackathon ,Biochemistry and Cell Biology ,Web service ,computer ,030217 neurology & neurosurgery ,Linked Open Data - Abstract
We report on the activities of the 2015 edition of the BioHackathon, an annual event that brings together researchers and developers from around the world to develop tools and technologies that promote the reusability of biological data. We discuss issues surrounding the representation, publication, integration, mining and reuse of biological data and metadata across a wide range of biomedical data types of relevance for the life sciences, including chemistry, genotypes and phenotypes, orthology and phylogeny, proteomics, genomics, glycomics, and metabolomics. We describe our progress to address ongoing challenges to the reusability and reproducibility of research results, and identify outstanding issues that continue to impede the progress of bioinformatics research. We share our perspective on the state of the art, continued challenges, and goals for future research and development for the life sciences Semantic Web.
- Published
- 2020
28. A Cost-effectiveness Analysis of Sunitinib vs. Interferon-alpha in Patient with Advanced Renal Cell Carcinoma in Japan
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Yumiko Ogawa, Tomiko Sunaga, Masahiro Usuda, Kazuki Tomura, Tadanori Sasaki, Yuki Naito, Hiroyuki Sakamaki, Akiko Nagatani, Nao Akiyama, Mari Kogo, Tatsuya Kurihara, Haruaki Sasaki, and Tatsunori Murata
- Subjects
Pharmacology ,Oncology ,medicine.medical_specialty ,Sunitinib ,business.industry ,Pharmaceutical Science ,Alpha interferon ,Cost-effectiveness analysis ,urologic and male genital diseases ,medicine.disease ,Molecular targeting ,Renal cell carcinoma ,Internal medicine ,medicine ,In patient ,business ,Medical expenses ,Medical costs ,health care economics and organizations ,medicine.drug - Abstract
Sunitinib has been shown to offer clinical benefits during the treatment of advanced renal cell carcinoma. However, molecular targeting drugs are expensive and can have a significant impact on medical expenses. The purpose of this study was to assess the cost-effectiveness of sunitinib as a first-line therapy compared with interferon-alpha (IFN-α) in metastatic renal cell carcinoma patients. A Markov model was used to show the clinical courses of patients with metastatic renal cell carcinoma who received sunitinib or IFN-α. The transition probabilities and utilities employed in this Markov model were derived from two sources. This study focused on the perspective of public healthcare payer, as only direct medical costs were estimated from the treatment schedule for metastatic renal cell cancer. In the cost-effectiveness analysis, outcomes were valued in terms of life years (LYs) and quality-adjusted life years (QALYs). We calculated the incremental cost-effectiveness ratio (ICER) during the cost-effectiveness analysis. The results were tested using Monte Carlo simulations. Sunitinib and IFN-α treatment resulted in LYs of 2.40 years and 2.03 years, QALYs of 1.58 and 1.25, and expected costs of 13,572,629 yen and 6,083,002 yen, respectively. As a result, the ICER associated with replacing IFN-α with sunitinib was 22,695,839 yen/QALYs. Our results suggest that compared with IFN-α, sunitinib prolongs LYs and QALYs, but the increases in quality achieved by sunitinib are more expensive than those produced by IFN-α.
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- 2018
29. CRISPR-Cas3 induces broad and unidirectional genome editing in human cells
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Shinichiro Nakada, Kazuto Yoshimi, Tomoji Mashimo, Yuki Naito, Yuya Okuzaki, Peter Gee, Takashi Yamamoto, Yayoi Kunihiro, Shigetoshi Sano, Akitsu Hotta, Hiroyuki Morisaka, Huaigeng Xu, Ekasit Sonpho, Junji Takeda, and Noriko Sasakawa
- Subjects
0301 basic medicine ,congenital, hereditary, and neonatal diseases and abnormalities ,CRISPR-Cas systems ,Base pair ,Science ,CRISPR-Associated Proteins ,Induced Pluripotent Stem Cells ,General Physics and Astronomy ,Computational biology ,Biologics ,Article ,General Biochemistry, Genetics and Molecular Biology ,Gene Knockout Techniques ,03 medical and health sciences ,0302 clinical medicine ,Genome editing ,Humans ,CRISPR ,Clustered Regularly Interspaced Short Palindromic Repeats ,DNA Cleavage ,lcsh:Science ,Gene ,Sequence Deletion ,Gene Editing ,Multidisciplinary ,biology ,Cas9 ,HEK 293 cells ,DNA Helicases ,Helicase ,Exons ,General Chemistry ,Muscular Dystrophy, Duchenne ,Protospacer adjacent motif ,HEK293 Cells ,030104 developmental biology ,Gene Expression Regulation ,biology.protein ,lcsh:Q ,030217 neurology & neurosurgery - Abstract
Although single-component Class 2 CRISPR systems, such as type II Cas9 or type V Cas12a (Cpf1), are widely used for genome editing in eukaryotic cells, the application of multi-component Class 1 CRISPR has been less developed. Here we demonstrate that type I-E CRISPR mediates distinct DNA cleavage activity in human cells. Notably, Cas3, which possesses helicase and nuclease activity, predominantly triggered several thousand base pair deletions upstream of the 5′-ARG protospacer adjacent motif (PAM), without prominent off-target activity. This Cas3-mediated directional and broad DNA degradation can be used to introduce functional gene knockouts and knock-ins. As an example of potential therapeutic applications, we show Cas3-mediated exon-skipping of the Duchenne muscular dystrophy (DMD) gene in patient-induced pluripotent stem cells (iPSCs). These findings broaden our understanding of the Class 1 CRISPR system, which may serve as a unique genome editing tool in eukaryotic cells distinct from the Class 2 CRISPR system., Class 1 CRISPR systems are not as developed for genome editing as Class 2 systems are. Here the authors show that Cas3 can be used to generate functional knockouts and knock-ins, as well as Cas3-mediated exon-skipping in DMD cells.
- Published
- 2019
30. Competing Interactions in Hierarchical Porphyrin Self-Assembly Introduce Robustness in Pathway Complexity
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Mathijs F. J. Mabesoone, Tomoko Yamaguchi, Yuki Naito, E. W. Meijer, Albert J. Markvoort, Eiji Yashima, Floris Helmich, Anja R. A. Palmans, Motonori Banno, Macro-Organic Chemistry, Institute for Complex Molecular Systems, Computational Biology, and Macromolecular and Organic Chemistry
- Subjects
chemistry.chemical_classification ,Isodesmic reaction ,010405 organic chemistry ,Chemistry ,Nucleation ,Supramolecular chemistry ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Article ,Catalysis ,0104 chemical sciences ,Solvent ,Supramolecular polymers ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,Monomer ,Polymerization ,Chemical physics ,Self-assembly - Abstract
Pathway complexity in supramolecular polymerization has recently sparked interest as a method to generate complex material behavior. The response of these systems relies on the existence of a metastable, kinetically trapped state. In this work, we show that strong switch-like behavior in supramolecular polymers can also be achieved through the introduction of competing aggregation pathways. This behavior is illustrated with the supramolecular polymerization of a porphyrin-based monomer at various concentrations, solvent compositions, and temperatures. It is found that the monomers aggregate via an isodesmic mechanism in weakly coupled J-type aggregates at intermediate solvent quality and temperature, followed by nucleated H-aggregates at lower solvent qualities and temperatures. At further increased thermodynamic driving forces, such as high concentration and low temperature, the H-aggregates can form hierarchical superhelices. Our mathematical models show that, contrary to a single-pathway polymerization, the existence of the isodesmic aggregation pathway buffers the free monomer pool and renders the nucleation of the H-aggregates insensitive to concentration changes in the limit of high concentrations. We also show that, at a given temperature or solvent quality, the thermodynamically stable aggregate morphology can be selected by controlling the remaining free external parameter. As a result, the judicious application of pathway complexity allows us to synthesize a diverse set of materials from only a single monomer. We envision that the engineering of competing pathways can increase the robustness in a wide variety of supramolecular polymer materials and lead to increasingly versatile applications.
- Published
- 2018
31. NSR1/MYR2 is a negative regulator of ASN1 expression and its possible involvement in regulation of nitrogen reutilization in Arabidopsis
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Namie Ohtsuki, Toshitsugu Nakano, Yoshimi Nakano, Kaoru Suzuki, and Yuki Naito
- Subjects
0106 biological sciences ,0301 basic medicine ,Senescence ,Nitrogen ,Photoperiod ,Asparagine synthetase ,Mutant ,Arabidopsis ,Plant Science ,Phloem ,Biology ,01 natural sciences ,Negative regulator ,03 medical and health sciences ,Genetics ,Transcription factor ,Vascular tissue ,Arabidopsis Proteins ,Aspartate-Ammonia Ligase ,Biological Transport ,General Medicine ,biology.organism_classification ,Plant Leaves ,030104 developmental biology ,Biochemistry ,Agronomy and Crop Science ,Transcription Factors ,010606 plant biology & botany - Abstract
Nitrogen (N) is a major macronutrient that is essential for plant growth. It is important for us to understand the key genes that are involved in the regulation of N utilization. In this study, we focused on a GARP-type transcription factor known as NSR1/MYR2, which has been reported to be induced under N-deficient conditions. Our results demonstrated that NSR1/MYR2 has a transcriptional repression activity and is specifically expressed in vascular tissues, especially in phloem throughout the plant under daily light-dark cycle regulation. The overexpression of NSR1/MYR2 delays nutrient starvation- and dark-triggered senescence in the mature leaves of excised whole aerial parts of Arabidopsis plants. Furthermore, the expression of asparagine synthetase 1 (ASN1), which plays an important role in N remobilization and reallocation, i.e. N reutilization, in Arabidopsis, is negatively regulated by NSR1/MYR2, since the expressions of NSR1/MYR2 and ASN1 were reciprocally regulated during the light-dark cycle and ASN1 expression was down-regulated in overexpressors of NSR1/MYR2 and up-regulated in T-DNA insertion mutants of NSR1/MYR2. Therefore, the present results suggest that NSR1/MYR2 plays a role in N reutilization as a negative regulator through controlling ASN1 expression.
- Published
- 2017
32. Anti-hyperglycemic Effect of Long-Term Bis(hinokitiolato)zinc Complex ([Zn(hkt)2]) Ingestion on Insulin Resistance and Pancreatic Islet Cells Protection in Type 2 Diabetic KK-Ay Mice
- Author
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Yutaka Yoshikawa, Hiroyuki Yasui, Michiko Shintani, Yuki Naito, Shingo Kamoshida, and Naemi Kajiwara
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Pharmaceutical Science ,Adipose tissue ,chemistry.chemical_element ,030209 endocrinology & metabolism ,Zinc ,03 medical and health sciences ,0302 clinical medicine ,Insulin resistance ,In vivo ,Islet cells ,Internal medicine ,medicine ,Ingestion ,Pharmacology ,geography ,geography.geographical_feature_category ,General Medicine ,Islet ,medicine.disease ,030104 developmental biology ,medicine.anatomical_structure ,Endocrinology ,chemistry ,Pancreas - Abstract
Zinc (Zn) is a trace element with anti-diabetes mellitus (anti-DM) effects. Zn complexes exhibit stronger insulin-like activity than Zn ions. Bis(hinokitiolato)zinc complex ([Zn(hkt)2]) was recently reported to be a potent anti-DM candidate. We examined the effects of [Zn(hkt)2] on insulin resistance and pancreatic islet cells through in vivo long-term ingestion studies. In an in vivo study, we performed 4-month long-term [Zn(hkt)2] administration experiments in KK-Ay mice as a type 2 DM animal model. Ingestion of [Zn(hkt)2] resulted in lower blood glucose levels compared with the non-treated KK-Ay mice (control group). Additionally, [Zn(hkt)2] treatment decreased plasma insulin concentration compared with that of the non-treated KK-Ay group. [Zn(hkt)2] treatment resulted in a significant suppression of islet cell enlargement and a significantly decreased number of insulin-positive cells compared with the non-treated KK-Ay control group. The [Zn(hkt)2] treatment group showed the increasing tendency in the amount of Zn levels in peripheral organs; liver, muscle, adipose, and pancreas, compared with the non-treated KK-Ay control group. However, the Zn level in the pancreas of the [Zn(hkt)2] treatment group did not show the significant increase compared with the non-treated KK-Ay control group. This accumulation of Zn in pancreas suggested that [Zn(hkt)2] mainly effects on the peripheral tissue, and [Zn(hkt)2] has the less effect on the pancreas directly. Thus, we concluded that [Zn(hkt)2] exerted the main effect on peripheral organs by ameliorating insulin resistance.
- Published
- 2017
33. Effects of exercise on biological trace element concentrations and selenoprotein P expression in rats with fructose-induced glucose intolerance
- Author
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Keita Chikamoto, Asuka Uratani, Yutaka Yoshikawa, Hiroyuki Yasui, Namika Miya, Yuki Naito, and Keiji Terao
- Subjects
0301 basic medicine ,medicine.medical_specialty ,medicine.medical_treatment ,Clinical Biochemistry ,Medicine (miscellaneous) ,medicine.disease_cause ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Downregulation and upregulation ,Internal medicine ,Casein ,Medicine ,Glycogen synthase ,030109 nutrition & dietetics ,Nutrition and Dietetics ,biology ,business.industry ,Selenoprotein P ,Insulin ,Fructose ,Lactic acid ,Endocrinology ,chemistry ,biology.protein ,Original Article ,030211 gastroenterology & hepatology ,business ,Oxidative stress - Abstract
In the present study, we investigated the effects of exercise intended to prevent or treat lifestyle-related diseases on the glucose tolerance, insulin level, lactic acid utilization, muscle glycogen synthesis, hepatic and renal oxidative stress, hepatic selenoprotein P and biological trace element levels in organs of obese, glucose-intolerant rats. We fed normal, healthy rats a 20% casein diet while the glucose-intolerant, obese rats received a high-fructose diet. They were forced to run for one hour per day, six days per week, for ten weeks. Exercise reduced visceral fat and ameliorated glucose tolerance in the high-fructose group, lowered blood lactic acid levels, improved lactic acid usage efficiency, and increased oxidative stress and hepatic levels of Mn, Fe, Cu, and Zn in the normal and high-fructose groups. Additionally, exercise significantly upregulated hepatic selenoprotein P expression in both groups, however, its effect was remarkable in healthy group. On the other hand, muscle glycogen synthesis was not markedly enhanced in high-fructose-diet rats but in normal-diet rats in response to exercise. It is concluded that exercise conditions rather than exercise load must be customized and optimized for each health and disease states in advance before starting exercise training intended to prevent or treat lifestyle-related diseases.
- Published
- 2019
34. Pituitary apoplexy after cardiac surgery in a 14-year-old girl with Carney complex: a case report
- Author
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Hajime Hosoi, Jun Mori, Kazunori Tatsuzawa, Yuki Naito, Hisakazu Nakajima, Tokuo Mukai, Jun Tazoe, Akimasa Tomida, Shigeki Yagyu, and Tomoko Iehara
- Subjects
medicine.medical_specialty ,Adenoma ,Adolescent ,Endocrinology, Diabetes and Metabolism ,Thyrotropin ,030209 endocrinology & metabolism ,Heart Neoplasms ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,Pituitary adenoma ,medicine ,Humans ,Pituitary Neoplasms ,Cardiac Surgical Procedures ,Carney Complex ,Carney complex ,business.industry ,Insulin tolerance test ,Thyroid ,Pituitary tumors ,Myxoma ,Pituitary apoplexy ,medicine.disease ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Female ,Radiology ,Growth Hormone-Secreting Pituitary Adenoma ,Neoplasm Recurrence, Local ,business ,Pituitary Apoplexy - Abstract
A 14-year-old girl was referred to our department because of headache and visual impairment following the resection of recurrent cardiac myxoma. Head magnetic resonance imaging (MRI) scan detected an intra- and supra-sellar tumor. Moreover, the patient showed the presence of spotty skin pigmentations on her cheeks and lower lip. Blood examination revealed hypothyrotropinemia, and ultrasonography results revealed multiple thyroid nodules. She was diagnosed with Carney complex (CNC). Her pituitary tumor was suspected as growth hormone (GH)-secreting adenoma, because overgrowth was observed in the patient. However, biochemical examinations, including oral glucose tolerance test, failed to show the characteristic findings of GH-secreting adenoma. In contrast, insulin tolerance test showed GH deficiency. Her visual impairment improved without performing decompression surgery, and the tumor size decreased, as per the MRI findings. Based on clinical course, the patient was diagnosed with pituitary apoplexy in pituitary adenoma, following which she was discharged. At 3 months after discharge, thyrotropin-releasing hormone loading test performed revealed low thyrotropin-stimulating hormone and thyroid hormone levels, and the patient was in a depressed mood. Therefore, l-T4 replacement was initiated, following which her GH secretory capacity gradually improved. Here, we report, to the best of our knowledge, the first case of a patient with pituitary apoplexy in CNC. Such condition must be identified in young patients with recurrent cardiac myxoma, and examinations, such as head MRI, must be performed.
- Published
- 2019
35. TogoGenome/TogoStanza: modularized Semantic Web genome database
- Author
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Shinobu Okamoto, Hiroshi Mori, Takatomo Fujisawa, Yuki Naito, Toshihisa Takagi, Shuichi Kawashima, Toshiaki Katayama, Hirokazu Chiba, and Yuki Moriya
- Subjects
Source code ,Computer science ,media_common.quotation_subject ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Databases, Genetic ,Web page ,Humans ,SPARQL ,RDF ,MIT License ,Semantic Web ,030304 developmental biology ,media_common ,computer.programming_language ,0303 health sciences ,Information retrieval ,030302 biochemistry & molecular biology ,Genomics ,computer.file_format ,Gene Annotation ,Original Article ,General Agricultural and Biological Sciences ,computer ,Software ,Information Systems ,RDF query language - Abstract
TogoGenome is a genome database that is purely based on the Semantic Web technology, which enables the integration of heterogeneous data and flexible semantic searches. All the information is stored as Resource Description Framework (RDF) data, and the reporting web pages are generated on the fly using SPARQL Protocol and RDF Query Language (SPARQL) queries. TogoGenome provides a semantic-faceted search system by gene functional annotation, taxonomy, phenotypes and environment based on the relevant ontologies. TogoGenome also serves as an interface to conduct semantic comparative genomics by which a user can observe pan-organism or organism-specific genes based on the functional aspect of gene annotations and the combinations of organisms from different taxa. The TogoGenome database exhibits a modularized structure, and each module in the report pages is separately served as TogoStanza, which is a generic framework for rendering an information block as IFRAME/Web Components, which can, unlike several other monolithic databases, also be reused to construct other databases. TogoGenome and TogoStanza have been under development since 2012 and are freely available along with their source codes on the GitHub repositories at https://github.com/togogenome/ and https://github.com/togostanza/, respectively, under the MIT license.
- Published
- 2019
36. Bowel sound-based features to investigate the effect of coffee and soda on gastrointestinal motility
- Author
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Takeyuki Haraguchi, Takuma Gyobu, Kenta Kanemoto, Junichi Inobe, Takahiro Emoto, Ayumi Sano, Takashi Uebanso, Yuki Naito, Akira Takahashi, Kensuke Horiyama, and Masatake Akutagawa
- Subjects
Generation process ,medicine.medical_specialty ,Abdominal pain ,Constipation ,business.industry ,0206 medical engineering ,Biomedical Engineering ,Motility ,Health Informatics ,02 engineering and technology ,020601 biomedical engineering ,Gastroenterology ,Gastrointestinal gas ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Signal Processing ,medicine ,Ingestion ,In patient ,medicine.symptom ,business ,030217 neurology & neurosurgery - Abstract
Objective Constipation negatively affects the quality of life by causing abdominal pain and distention. It is common among women and older individuals and frequently encountered in Japan. Coffee and soda ingestion promote gastrointestinal motility; therefore, both liquids are considered effective for alleviating constipation. While invasive approaches or large-scale equipment, such as magnetic resonance imaging and radiography, are needed to confirm their effect on gastrointestinal motility, bowel sound (BS) assessment can be easily and non-invasively performed using low-cost equipment. Differently to coffee, soda contains carbon dioxide and its ingestion may therefore increase gastrointestinal gas and in turn affect the BS generation process. However, the relationship between gastrointestinal gas and acoustic BS features has not yet been investigated. This study aimed to investigate the effect of increased gastrointestinal gas resulting from soda ingestion on the acoustic BS features extracted using a newly improved BS detection technique. Methods We used BS-based acoustic features, including number of BSs detected/min, BS length, and BS power, extracted via an artificial neural network-based BS detection approach, which was developed in a previous study and here improved. Results BSs detected/min and BS length significantly increased after, compared with before, coffee and soda intake. Furthermore, we found that longer BSs (>128 ms) were more significantly associated with soda (200 mL) intake than with coffee (200 mL) intake. Conclusions BS length and BSs detected/min can sensitively evaluate gastrointestinal motility, and BS length may reflect information on gastrointestinal gas in addition to gastrointestinal motility. Recording of BS-based acoustic features is a non-invasive and convenient means to evaluate the effects of liquid intake on gastrointestinal motility in patients with functional gastrointestinal disorders.
- Published
- 2021
37. The ERF transcription factor EPI1 is a negative regulator of dark-induced and jasmonate-stimulated senescence in Arabidopsis
- Author
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Sumire Fujiwara, Kaoru Suzuki, Kwi-Mi Chung, Namie Otsuki, Toshitsugu Nakano, Yuki Naito, Yayoi Tsujimoto-Inui, Masaru Ohme-Takagi, and Nobutaka Mitsuda
- Subjects
0106 biological sciences ,0301 basic medicine ,Senescence ,Methyl jasmonate ,biology ,fungi ,Regulator ,food and beverages ,Repressor ,Plant Science ,biology.organism_classification ,01 natural sciences ,Cell biology ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,chemistry ,Arabidopsis ,Jasmonate ,Agronomy and Crop Science ,Gene ,Transcription factor ,010606 plant biology & botany ,Biotechnology - Abstract
Identification of the factors involved in the regulation of senescence and the analysis of their function are important for both a biological understanding of the senescence mechanism and the improvement of agricultural productivity. In this study, we identified an ERF gene termed "ERF gene conferring Postharvest longevity Improvement 1" (EPI1) as a possible regulator of senescence in Arabidopsis. We found that EPI1 possesses transcriptional repression activity and that the transgenic plants overexpressing EPI1 and expressing its chimeric repressor, EPI1-SRDX, commonly suppressed the darkness-induced senescence in their excised aerial parts. These transgenic plants additionally maintained a high level of chlorophyll, even after the methyl jasmonate (MeJA) treatment, which stimulated senescence in the dark. In addition, we found that senescence-induced and -reduced genes are down- and upregulated, respectively, in the MeJA-treated transgenic plants under darkness. Our results suggest that EPI1 functions as a negative regulator of the dark-induced and JA-stimulated senescence.
- Published
- 2016
38. Continuous Flow Synthesis of N-Phenylphenylglycine By Dehydration and Electrochemical Carboxylation
- Author
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Kenta Tanaka, Mahito Atobe, and Yuki Naito
- Subjects
Carboxylation ,Chemical engineering ,Chemistry ,Continuous flow ,medicine ,Dehydration ,medicine.disease ,Electrochemistry - Abstract
α-Amino acids and their derivatives are important and essential resources for human life such as foods, medical drugs, cosmetics and so on. The classical Strecker α-amino acids synthesis is a longstanding method although this classical method requires highly toxic cyanide reagents as the carbon source and these regents are unfavorable from the viewpoint of green chemistry. Carbon dioxide, on the other hand, would also be an abundant and favorable carbon source. There are several examples of synthesis of α-amino acids by direct carboxylation of imines with carbon dioxide. Because of chemical stability of carbon dioxide, this direct carboxylation requires stoichiometric quantities of hard to handle reagents such as magnesium metal and organotins under severe or harsh reaction conditions. In this context, electrochemical carboxylation represents an attractive alternative to conventional chemical carboxylation methods because it is possible to readily generate highly reactive carbon nucleophiles that immediately react with carbon dioxide without handling sensitive, expensive, and toxic reagent. However, metal ions derived from sacrificial anode such as magnesium and aluminium anodes are generally required to stabilize the unstable carboxylate ions. A flow microreactor enables fast generation and consumption of the unstable species. Therefore, it is attractive reaction system for electrochemical carboxylation involving unstable carboxylate ions without sacrificial anodes. Moreover, the electrochemical synthesis with a flow microreactor offers operational advantages over batch processes. Under these backgrounds, we have demonstrated the electrochemical carboxylation of in situ generated imines in a continuous flow system. The present method enables an efficient synthesis for N-phenylphenylglycine derivatives using easily available aldehydes, amines, and CO2 without the use of toxic metal reagents and sacrificial anode. As shown in Figure 1, the imine was smoothly generated from aldehyde and amine by dehydration using MS4A desiccant in a flow operation, and then reacted with carbon dioxide in the electrochemical flow microreactor to afford N-phenylphenylglycine derivatives with high to moderate yields. Figure 1
- Published
- 2020
39. Water and xenon ECR ion thruster—comparison in global model and experiment
- Author
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Hiroyuki Koizumi, Yuichi Nakagawa, Kimiya Komurasaki, and Yuki Naito
- Subjects
Xenon ,Materials science ,Ion thruster ,chemistry ,Electrically powered spacecraft propulsion ,Nuclear engineering ,chemistry.chemical_element ,Condensed Matter Physics ,Global model - Abstract
Gridded ion thrusters are one of the most commonly used types of electric propulsion, and alternative propellants have been studied for miniature ion thrusters to meet the demand of propulsion systems for micro-/nano-satellites. Water is a candidate as an alternative non-pressurized propellant for a CubeSat thruster. It is consistent with the CubeSat concept of short-term and low-cost development. In this paper, the characteristics of a miniature water ion thruster were compared with those of a xenon one using a global model and experiments. The dependence of the performance on the mass flow rate and the input microwave power was examined, and the effects of dissociation and doubly charged ions were directly measured by a quadrupole mass spectrometer. The estimates on the model were compared against experimental results for both propellants, and the performance of the thruster operating on xenon propellant was compared to the performance operating on water propellant. In the comparison between the estimates and the experimental results, the two differences were discussed: the one between water and xenon and the other from the experimental result in both cases. A performance decrease in the propellant utilization efficiency and the specific impulse cannot be avoided when using water as a propellant in an ion thruster. However, the ion production cost did not increase, and it showed the capability of water ion thruster for CubeSat application taking advantage of safety, low cost, non-pressurized system, and human-friendliness of water when used as a propellant.
- Published
- 2020
40. [A Cost-effectiveness Analysis of Sunitinib vs. Interferon-alpha in Patient with Advanced Renal Cell Carcinoma in Japan]
- Author
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Kazuki, Tomura, Yuki, Naito, Tomiko, Sunaga, Tatsuya, Kurihara, Masahiro, Usuda, Akiko, Nagatani, Yumiko, Ogawa, Nao, Akiyama, Haruaki, Sasaki, Tatsunori, Murata, Hiroyuki, Sakamaki, Mari, Kogo, and Tadanori, Sasaki
- Subjects
Indoles ,Cost-Benefit Analysis ,Interferon-alpha ,Antineoplastic Agents ,Kidney Neoplasms ,Markov Chains ,Japan ,Sunitinib ,Humans ,Pyrroles ,Molecular Targeted Therapy ,Quality-Adjusted Life Years ,Carcinoma, Renal Cell ,Monte Carlo Method - Abstract
Sunitinib has been shown to offer clinical benefits during the treatment of advanced renal cell carcinoma. However, molecular targeting drugs are expensive and can have a significant impact on medical expenses. The purpose of this study was to assess the cost-effectiveness of sunitinib as a first-line therapy compared with interferon-alpha (IFN-α) in metastatic renal cell carcinoma patients. A Markov model was used to show the clinical courses of patients with metastatic renal cell carcinoma who received sunitinib or IFN-α. The transition probabilities and utilities employed in this Markov model were derived from two sources. This study focused on the perspective of public healthcare payer, as only direct medical costs were estimated from the treatment schedule for metastatic renal cell cancer. In the cost-effectiveness analysis, outcomes were valued in terms of life years (LYs) and quality-adjusted life years (QALYs). We calculated the incremental cost-effectiveness ratio (ICER) during the cost-effectiveness analysis. The results were tested using Monte Carlo simulations. Sunitinib and IFN-α treatment resulted in LYs of 2.40 years and 2.03 years, QALYs of 1.58 and 1.25, and expected costs of 13,572,629 yen and 6,083,002 yen, respectively. As a result, the ICER associated with replacing IFN-α with sunitinib was 22,695,839 yen/QALYs. Our results suggest that compared with IFN-α, sunitinib prolongs LYs and QALYs, but the increases in quality achieved by sunitinib are more expensive than those produced by IFN-α.
- Published
- 2018
41. Rectifiable and nonrectifiable solution curves of half-linear differential systems
- Author
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Satoshi Tanaka, Mervan Pašić, and Yuki Naito
- Subjects
010101 applied mathematics ,half-linear system ,asymptotic behaviour ,attractive zero solution ,rectifiable curve ,nonrectifiable curve ,General Mathematics ,010102 general mathematics ,Mathematical analysis ,0101 mathematics ,Differential systems ,01 natural sciences ,Mathematics - Abstract
We study a geometric kind of asymptotic behaviour of every C 1 solution of a class of nonautonomous systems of half-linear differential equations with continuous coefficients. We give necessary and sufficient conditions such that the image of every solution (solution curve) has finite length (rectifiable curve) and infinite length (nonrectifiable, possible fractal curve). A particular attention is paid to systems having attractive zero solution. The main results are proved by using a new result for the nonrectifiable plane curves.
- Published
- 2018
42. Estimated number of off-target candidate sites for antisense oligonucleotides in human mRNA sequences
- Author
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Mikihiko Naito, Tokuyuki Yoshida, Eriko Uchida, Yuki Naito, Toru Kawanishi, Satoshi Obika, Kiyomi Sasaki, Yoji Sato, and Takao Inoue
- Subjects
0301 basic medicine ,Messenger RNA ,Binding Sites ,Oligonucleotide ,Genome, Human ,In silico ,RNA ,Cell Biology ,Computational biology ,Biology ,Oligonucleotides, Antisense ,03 medical and health sciences ,030104 developmental biology ,Antisense oligonucleotides ,Expression analysis ,Gene Targeting ,Genetics ,Humans ,Computer Simulation ,RNA, Messenger ,Gene - Abstract
Antisense oligonucleotide (ASO) therapeutics are single-stranded oligonucleotides which bind to RNA through sequence-specific Watson-Crick base pairings. A unique mechanism of toxicity for ASOs is hybridization-dependent off-target effects that can potentially occur due to the binding of ASOs to complementary regions of unintended RNAs. To reduce the off-target effects of ASOs, it would be useful to know the approximate number of complementary regions of ASOs, or off-target candidate sites of ASOs, of a given oligonucleotide length and complementarity with their target RNAs. However, the theoretical number of complementary regions with mismatches has not been reported to date. In this study, we estimated the general number of complementary regions of ASOs with mismatches in human mRNA sequences by mathematical calculation and in silico analysis using several thousand hypothetical ASOs. By comparing the theoretical number of complementary regions estimated by mathematical calculation to the actual number obtained by in silico analysis, we found that the number of complementary regions of ASOs could be broadly estimated by the theoretical number calculated mathematically. Our analysis showed that the number of complementary regions increases dramatically as the number of tolerated mismatches increases, highlighting the need for expression analysis of such genes to assess the safety of ASOs.
- Published
- 2017
43. 外傷患者に対する病院前輸液の功罪(Merits and demerits of prehospital intravenous fluid administration for trauma patients)
- Author
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森下 由香 (Yuka Morishita), 清水 隆文 (Takafumi Shimizu), 内藤 祐貴 (Yuki Naito), 大城 あき子 (Akiko Oshiro), 大西 新介 (Shinsuke Onishi), 奈良 理 (Satoshi Nara), and 高橋 功 (Isao Takahashi)
- Subjects
reproductive and urinary physiology - Abstract
要旨 【目的】外傷患者に対する病院前輸液が生命予後に与える影響は議論が分かれている。今回我々はショックを呈した外傷症例に対し,病院前輸液が来院時のfibrinogen値に与える影響と,ショックに対する改善効果を検討した。【対象】2010年4月から2014年10月までに当院へ搬送された18歳以上の外傷患者で現場にて出血性ショックであったものを対象とし後方視的に診療録調査を行い,病院前輸液施行群と非輸液群に分けて比較検討した。【結果】91例中,非輸液群が50例,輸液群が41例であった。fibrinogen値が200mg/dL未満となる予測因子を求めて多重ロジスティック回帰分析を施行したところ,病院前輸液の調整オッズ比が3.16(95%信頼区間:1.15–8.68)であった。一方,輸液群においては来院時収縮期血圧が有意に高く(非輸液群100.6±26.2mmHg vs 輸液群113.0±27.1mmHg),Base Deficitが有意に低かった(非輸液群4.4 [1.6–9.3] mmol/L vs 輸液群2.6 [0.6–4.7] mmol/L)。院内死亡率に有意差はなかったが,輸液群で低い傾向があった。【結語】病院前輸液はfibrinogen値を低下させる要因であったが,ショックとそれに伴う代謝性アシドーシスを抑制し,少なくとも生命予後を悪化させなかった。 ABSTRACT Background: The survival effect of prehospital intravenous fluid (IVF) administration for severely injured patients remains controversial. This study focuses on the impact of prehospital IVF on the fibrinogen level on admission to the emergency department and also analyzes the beneficial effect of prehospital IVF for fluid resuscitation in shock. Object and Methods: The medical charts of trauma patients aged 18 years or older who presented to the hospital between April 2010 and October 2014 were retrospectively reviewed; patients with hemorrhagic shock at the scene of arrival were identified and classified into two groups depending on whether or not prehospital IVF was administered. Results: Of the 91 patients who met the inclusion criteria, 41 of them received prehospital IVF and 50 did not. Multiple logistic regression analysis showed that the only prognostic factor for a fibrinogen level lower than 200mg/dL included prehospital IVF with an adjusted odds ratio: 3.16 (95% confidence interval: 1.15–8.68). On the other hand, in the IVF group, systolic blood pressure on arrival was significantly higher (no IVF: 100.6±26.2mmHg vs IVF: 113±27.1mmHg), and base deficit was significantly lower (no IVF: 4.4 [1.6–9.3] mmol/L vs IVF: 2.6 [0.6–4.7] mmol/L). In–hospital mortality of the IVF group was 9.8%, which was slightly lower than the no IVF group (14%), but the difference was not significant. Conclusion: Prehospital IVF decreased fibrinogen level in trauma patients, but it also reduced the metabolic acidosis during hemorrhagic shock and did not worsen survival.
- Published
- 2015
44. Isomeric effects of anti-diabetic α-lipoic acid with γ-cyclodextrin
- Author
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Naemi Kajiwara, Yutaka Yoshikawa, Kinuyo Matsumoto, Ayaka Okano, Daisuke Nakata, Hiroyuki Yasui, Keiji Terao, Yuki Naito, Naoko Ikuta, and Hinako Okamoto
- Subjects
Male ,medicine.medical_specialty ,Adipose Tissue, White ,Drug Evaluation, Preclinical ,Gene Expression ,Adipose tissue ,Stereoisomerism ,General Biochemistry, Genetics and Molecular Biology ,Mice ,chemistry.chemical_compound ,Internal medicine ,medicine ,Animals ,Hypoglycemic Agents ,General Pharmacology, Toxicology and Pharmaceutics ,Protein kinase A ,Thioctic Acid ,Adiponectin ,AMPK ,General Medicine ,PPAR gamma ,Blot ,Lipoic acid ,Endocrinology ,Diabetes Mellitus, Type 2 ,Biochemistry ,chemistry ,Phosphorylation ,Signal Transduction ,gamma-Cyclodextrins - Abstract
Aims Previous studies reported the anti-diabetic effects of α-lipoic acid (αLA) isomers: racemic-αLA, R-αLA, or S-αLA. Previously, we examined the anti-diabetic effects of αLA administered as a food additive, but were unable to demonstrate the differences among different isomers. In this study, αLAs were complexed with γ-cyclodextrin (γCD) for the stability. We then investigated the anti-diabetic effects of racemic-, R-, and S-αLA/γCDs in KKA y mice. Main methods Male type 2 diabetic KKA y mice were divided into 5 groups, and fed either a high-fat-diet (HFD), HFD supplemented with γCD, or HFD supplemented with racemic-αLA/γCD, R-αLA/γCD, or S-αLA/γCD for 4 weeks. At the end of the feeding period, HbA1c and adiponectin levels were measured, PPARγ2 mRNA expression levels were assessed in adipose tissues using real-time PCR, and AMP-activated protein kinase (AMPK) phosphorylation levels were evaluated in the liver by Western blotting. Key findings The anti-diabetic effects of αLA; the isomeric compounds racemic-, R-, and S-αLA/γCD were investigated using a male type 2 diabetic KKA y mouse model. Significant differences were observed in HbA1c and plasma adiponectin levels between R-αLA/γCD-treated mice and control mice. PPARγ2 mRNA expression levels were slightly higher in racemic- and R-αLA/γCD-treated mice. Moreover, AMPK phosphorylation levels were elevated in racemic-αLA/γCD- and R-αLA/γCD-treated mice, but remained unchanged in S-αLA/γCD-treated mice. Significance These results suggested that the stereoisomerism mediates a difference in the anti-diabetic effects of racemic-, R-, and S-αLA/γCDs. Furthermore, the anti-diabetic mechanism of αLA/γCD action may be attributed to the activation of AMPK in the liver.
- Published
- 2015
45. Takotsubo-like Myocardial Dysfunction in a Patient with Botulism
- Author
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Yoshiaki Kakehi, Shuichi Tonomura, Nobuyuki Takahashi, Hisao Shimizu, Yasunobu Goto, Yuki Naito, and Masatoshi Sato
- Subjects
Male ,medicine.medical_specialty ,Case Report ,Disease ,030204 cardiovascular system & hematology ,Botulinum toxin a ,Diagnosis, Differential ,03 medical and health sciences ,0302 clinical medicine ,Takotsubo Cardiomyopathy ,Internal medicine ,Internal Medicine ,medicine ,Humans ,In patient ,Botulism ,Botulinum Toxins, Type A ,Pure autonomic failure ,Takotsubo syndrome ,autonomic failure ,botulism ,business.industry ,General Medicine ,Respiratory Muscle Paralysis ,Middle Aged ,medicine.disease ,Cardiology ,Complication ,business ,botulinum toxin A ,030217 neurology & neurosurgery - Abstract
Botulinum toxin A (BTXA) can disrupt the neuromuscular and autonomic functions. We herein report a case of autonomic system dysfunction that manifested as Takotsubo-like myocardial dysfunction in a patient with botulism. Takotsubo syndrome results in acute cardiac insufficiency, another fatal complication of botulism in addition to respiratory muscle paralysis, particularly in patients with cardiovascular disease.
- Published
- 2017
46. Beneficial Effect of Bis(Hinokitiolato)Zn Complex on High-fat Diet-induced Lipid Accumulation in Mouse Liver and Kidney
- Author
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Yutaka Yoshikawa, Yuki Naito, Akiko Takenouchi, Katsuhiko Yoshizawa, and Hiroyuki Yasui
- Subjects
0301 basic medicine ,Cancer Research ,medicine.medical_specialty ,Diet, High-Fat ,Kidney ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Mice ,Internal medicine ,Diabetes mellitus ,medicine ,Organometallic Compounds ,Animals ,Humans ,Dyslipidemias ,Pharmacology ,Metabolic Syndrome ,Pioglitazone ,Chemistry ,Liver and kidney ,High fat diet ,Lipid metabolism ,medicine.disease ,Lipid Metabolism ,Obesity ,Disease Models, Animal ,Zinc ,030104 developmental biology ,Endocrinology ,medicine.anatomical_structure ,Liver ,Toxicity ,Thiazolidinediones ,medicine.drug ,Research Article - Abstract
Background/aim Metabolic syndrome-induced lifestyle-related diseases include diabetes mellitus (DM) and hypertension, and Zn-based compounds have effects on DM. We aimed to investigate the ameliorating effects of bis(hinokitiolato)Zn, [Zn(hkt)2] on lipid metabolism in the liver and kidney, histopathologically. Materials and methods We used a high-fat diet (HFD)-fed C57BL/6J mouse model and administered a diet containing 10-20 mg Zn/kg body weight (BW) or 20 mg pioglitazone/kg BW as the positive control. After the treatments, we collected blood, liver, and kidney samples and morphologically evaluated the mouse organs for fat accumulation. Results After a 4-month HFD administration, ectopic fat deposition was detected in the liver and kidney. Furthermore, Zn accumulation in the liver and kidney increased following [Zn(hkt)2] treatment, that reduced lipid accumulations and lipid toxicity in these tissues. Conclusion The results of this study suggest that [Zn(hkt)2] could be a novel anti-dyslipidaemia compound for treating diet-induced obesity.
- Published
- 2017
47. Anti-hyperglycemic Effect of Long-Term Bis(hinokitiolato)zinc Complex ([Zn(hkt)
- Author
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Yuki, Naito, Yutaka, Yoshikawa, Michiko, Shintani, Shingo, Kamoshida, Naemi, Kajiwara, and Hiroyuki, Yasui
- Subjects
Blood Glucose ,Male ,Mice, Inbred Strains ,Tropolone ,Rats ,Trace Elements ,Disease Models, Animal ,Islets of Langerhans ,Zinc ,Diabetes Mellitus, Type 2 ,Zinc Compounds ,Monoterpenes ,Animals ,Hypoglycemic Agents ,Insulin ,Insulin Resistance ,Cells, Cultured - Abstract
Zinc (Zn) is a trace element with anti-diabetes mellitus (anti-DM) effects. Zn complexes exhibit stronger insulin-like activity than Zn ions. Bis(hinokitiolato)zinc complex ([Zn(hkt)
- Published
- 2017
48. Analysis of the Risk Factors for Severe Oral Mucositis in Head and Neck Cancer after Chemoradiotherapy with S-1
- Author
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Kazuki Tomura, Yuki Naito, Mari Kogo, Naokazu Fujii, Akiko Nagatani, Touji Hashimoto, Yumiko Ogawa, Tadanori Sasaki, Tomiko Sunaga, and Takayuki Okabe
- Subjects
Oncology ,Male ,medicine.medical_specialty ,medicine.medical_treatment ,Pharmaceutical Science ,Risk Assessment ,Severity of Illness Index ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Risk Factors ,Internal medicine ,Antineoplastic Combined Chemotherapy Protocols ,medicine ,Mucositis ,Humans ,Aged ,Retrospective Studies ,Tegafur ,Pharmacology ,Univariate analysis ,Stomatitis ,Radiotherapy ,business.industry ,Standard treatment ,Head and neck cancer ,Retrospective cohort study ,Chemoradiotherapy ,Middle Aged ,medicine.disease ,Primary tumor ,Radiation therapy ,Drug Combinations ,Oropharyngeal Neoplasms ,Oxonic Acid ,Logistic Models ,Head and Neck Neoplasms ,030220 oncology & carcinogenesis ,Female ,business - Abstract
Radiotherapy (RT) and chemoradiotherapy (CRT) is widely accepted as the standard treatment for head and neck cancer (HNC). Oral mucositis (OM) often develops as an adverse reaction in HNC patients that receive RT or CRT involving S-1. However, little is known about the risk factors for OM in HNC patients. We retrospectively evaluated patients' pre-treatment clinical data in order to identify the risk factors for severe OM in HNC patients that are treated with RT or CRT involving S-1. We analyzed the cases of 129 patients who received RT or CRT involving S-1 for HNC. The endpoint of the survey was the occurrence of severe OM (≥grade 2). Risk factors that were significantly related to severe OM were identified using logistic regression analysis. The patients' mean age was 69.3±10.1 years, and 118 (92%) of the patients were male. The primary tumor was located in the oropharynx in 21.7% of cases. Severe OM occurred in 85.0% of cases. In the univariate analysis, the following variables were found to be associated with severe OM: age, the type of radiotherapy, disease stage, and chemotherapy. In the multivariate analysis, the location of the primary tumor and chemotherapy were identified as significant risk factors that contributed independently to the risk of severe OM (p
- Published
- 2017
49. Kounis syndrome presenting with anaphylaxis and vasospastic angina: a case report
- Author
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Takeshi Haoka, Yuka Morishita, Shinsuke Onishi, Yuki Naito, Isao Takahashi, and Satoshi Nara
- Subjects
Vasospastic angina ,medicine.medical_specialty ,business.industry ,Medicine ,Kounis syndrome ,business ,medicine.disease ,Dermatology ,Anaphylaxis - Published
- 2014
50. Antidiabetic effect of the α-lipoic acid γ-cyclodextrin complex
- Author
-
Naemi Kajiwara, Daisuke Nakata, Yuki Naito, Yutaka Yoshikawa, Hiroyuki Yasui, Keiji Terao, Ayaka Okano, Kinuyo Matsumoto, and Naoko Ikuta
- Subjects
medicine.medical_specialty ,antidiabetic effect ,type 2 diabetes mellitus ,Clinical Biochemistry ,Medicine (miscellaneous) ,Disease ,γCD complex ,chemistry.chemical_compound ,Diabetes mellitus ,Internal medicine ,medicine ,Protein kinase A ,α-lipoic acid ,Nutrition and Dietetics ,business.industry ,Type 2 Diabetes Mellitus ,medicine.disease ,Lipoic acid ,Endocrinology ,Postprandial ,chemistry ,Phosphorylation ,Original Article ,lipids (amino acids, peptides, and proteins) ,business ,Homeostasis - Abstract
In recent years, the number of patients suffering from diabetes mellitus has been increasing worldwide. In particular, type 2 diabetes mellitus, a lifestyle-related disease, is recognized as a serious disease with various complications. Many types of pharmaceutics or specific health foods have been used for the management of diabetes mellitus. At the same time, the relationship between diabetes mellitus and α-lipoic acid has been recognized for many years. In this study, we found that the α-lipoic acid γ-cyclodextrin complex exhibited an HbA1c lowering effect for treating type 2 diabetes mellitus in animal models. Moreover, in this study, we investigated the activation of phosphorylation of AMP-activated protein kinase, which plays a role in cellular energy homeostasis, in the liver of KKA(y) mice by using α-lipoic acid and the α-lipoic acid γ-cyclodextrin complex. Our results show that the α-lipoic acid γ-cyclodextrin complex strongly induced the phosphorylation of AMP-activated protein kinase. Thus, we concluded that intake of the α-lipoic acid γ-cyclodextrin complex exerted an antidiabetic effect by suppressing the elevation of postprandial hyperglycemia as well as doing exercise.
- Published
- 2014
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