78 results on '"Yingying Yuan"'
Search Results
2. Laboratory tests and analysis of drug resistance in non-tuberculous mycobacteria
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Jiao Tan, Yachun Wang, Zheng Li, Shuang Xia, Zhen Guo, Wenbo Li, Yingying Yuan, Jingcai Gao, and Wei Wang
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Non-tuberculous mycobacterium ,Strain identification ,Laboratory tests ,Specificity ,Drug resistance analysis ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Background: This study analyzed the laboratory diagnosis results and drug resistance of patients infected with non-tuberculous mycobacterium (NTM). Methods: We collected information on patients with positive indicators of NTM infection at the Henan Provincial Chest Hospital from 2020 to 2022. Acid-fast smear, mycobacterium culture, QB-SPOT assay, GeneXpert MTB/RIF assay, immunoglobulin E test, tuberculosis antibody test, and microplate method for drug sensitivity test were analyzed using strain identification as the gold standard. Results: The 242 cases of NTM infection were predominantly detected with slow-growing mycobacteria (a detection rate of 87.19%), among which Mycobacterium intracellulare (66.53%), Mycobacterium avium (15.70%), and Mycobacterium chelonei/abscessus complex (11.16%) ranked the top three in terms of the isolation rate. Males patients accounted for a higher proportion (58.26%) than females (41.74%), and the majority of them were over 60 years (50.83%). Among laboratory tests for patients with NTM infection, mycobacterium culture showed a highest detected rate (87.20%) among laboratory tests. The results of the drug sensitivity test demonstrated that the resistance rate of NTM was generally high. Moreover, the Mycobacterium avium complex with the highest isolation rate showed 100% resistant to doxycycline and minocycline, but exhibited relatively high sensitivity to moxifloxacin (a resistance rate of 7.89%) and rifabutin (a resistance rate of 13.16%). The Mycobacterium chelonei/abscessus complex was 100% resistant to doxycycline and relatively sensitive to cefoxitin (29.17%) and clarithromycin (37.50%). Conclusion: The NTM species isolated by the Henan Provincial Chest Hospital is dominated by Mycobacterium intracellulare and the highest positive rate is detected by mycobacterium culture among laboratory tests. NTM infection generally exhibits a high rate of drug resistance. Accordingly, the accurate diagnosis of NTM diseases requires enhanced drug sensitivity testing to provide patients with targeted combination drug treatment.
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- 2024
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3. Exploring the influencing factors of unmet palliative care needs in Chinese patients with end-stage renal disease undergoing maintenance hemodialysis: a cross-sectional study
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Xuefei Wang, Yongzhen Mo, Yingying Yuan, Yi Zhou, Yan Chen, Juan Sheng, and Jing Liu
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End-stage renal disease ,Hemodialysis ,Palliative care ,Risk factors ,Unmet need ,Special situations and conditions ,RC952-1245 - Abstract
Abstract Background The role of palliative care for end-stage renal disease (ESRD) patients have been proven in some developed countries, but it is still unclear in the mainland of China. In fact, patients with ESRD experience many unmet palliative care needs, such as physical, psychological, social and spiritual needs, but the factors influencing these needs have not investigated. Methods A cross-sectional study was conducted at two hemodialysis centers in the mainland of China from January to September 2022. Convenience sampling was used to collect data on the participants' socio-demographics, clinical characteristics, the Palliative Care Outcome Scale (POS), the Dialysis Symptom Index (DSI), the Karnofsky Performance Status Scale (KPS), the Patient Health Questionnaire-9 item (PHQ-9), and the Social Support Rate Scale (SSRS). Data were analyzed using latent profile analysis, Kruskal–Wallis test, one-way analysis of variance (ANOVA), the chi-square test and multinomial logistic regression analysis. Results Three hundred five participants were included in this study, and divided palliative care needs into three categories: Class 1, mild palliative care needs (n = 154, 50.5%); Class 2, moderate palliative care needs (n = 89, 29.2%); Class 3, severe palliative care needs (n = 62, 20.3%). Based on the analysis of three profiles, the influencing factors of unmet needs were further analyzed. Compared with Class 3, senior high school education, the household per capita monthly income
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- 2023
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4. The value of Xpert MTB/RIF assay of urine samples in the early diagnosis of smear-negative urinary tuberculosis
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Yachun Wang, Jiao Tan, Lei Lei, Yingying Yuan, Wenbo Li, Yue Zhao, Yali Wang, Xiaodong Niu, Zheng Li, Lukuan Wei, Yungang Han, Meijing Cheng, Xu Guo, Xue Han, and Wei Wang
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Smear-negative ,Culture ,Xpert MTB/RIF assay ,TB-DNA ,Urinary tract tuberculosis ,Medicine - Abstract
Abstract Background According to reports, between 30 and 40 percent of extrapulmonary tuberculosis (EPTB) cases are caused by urinary tract tuberculosis (UTB). It is critical to identify UTB quickly since it frequently precedes delayed medical attention, which can have detrimental effects. This study examined the use of Xpert MTB/RIF, a PCR test that can detect MTB as well as resistance to an important drug, rifampicin (RIF), in UTB particularly, for the early identification of UTB. Methods 180 participants with clinically presumptive UTB whose urine samples were chosen for urine sediment smear, culture, Xpert MTB/RIF, and TB-DNA testing at Henan Chest Hospital between January 2019 and July 2022. Evaluation of test performance using Composite Reference Standards (CRSs). We studied and compared the positivity rate for various tests using the t-test. The effectiveness of smear, culture, Xpert MTB/RIF, and TB-DNA was assessed using McNemar test. Results In this subject, a total of 108 participants were diagnosed with UTB, and the positivity rate was 67.1%. Compared with CRS, the positivity rate of Xpert MTB/RIF, smear, culture, and TB-DNA was 29.69% (19/64, P 0.05), and 18.75% (6/32, P 0.05), and 26.7% (4/15, P > 0.05) for TB-DNA, respectively, compared to smear negative. Xpert MTB/RIF assay specificity was significant for culture and TB-DNA (53.6% vs. 25%, P
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- 2022
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5. Palliative care needs and symptom burden in younger and older patients with end-stage renal disease undergoing maintenance hemodialysis: A cross-sectional study
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Xuefei Wang, Qiuyin Shi, Yongzhen Mo, Jing Liu, and Yingying Yuan
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End-stage renal disease ,Hemodialysis ,Needs assessment ,Palliative care ,Quality of life ,Symptom burden ,Nursing ,RT1-120 - Abstract
Objectives: To investigate the current situation of palliative care needs and the symptom burden in patients with end-stage renal disease (ESRD) undergoing maintenance hemodialysis (MHD), and to explore whether there are differences between younger and older patients. Methods: This cross-sectional study was conducted in the hemodialysis centers of two tertiary hospitals from November 2021 to June 2022. Participants were selected by convenience sampling. Socio-demographics, clinical characteristics, the Palliative Care Outcome Scale (POS), the Dialysis Symptom Index (DSI), and health-related quality of life (EQ-5D-3L) were used for evaluation. Descriptive statistics, between-group comparisons, and correlation analysis were used to analyze the data. Results: A total of 236 patients were enrolled, including 118 younger and 118 older patients. The total median (P25, P75) POS score was 16.0 (12.0, 23.0), and the score was higher in older patients (P
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- 2022
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6. Association of lncRNA H19 polymorphisms with cancer susceptibility: An updated meta-analysis based on 53 studies
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Yingying Yuan, Yachun Wang, Xiaodong Niu, Yungang Han, Wenbo Li, Meijin Cheng, Zheng Li, Jiao Tan, Yue Zhao, and Wei Wang
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lncRNA ,H19 ,cancer susceptibility ,polymorphism ,meta-analysis ,Genetics ,QH426-470 - Abstract
The association between polymorphisms in lncRNA H19 and cancer susceptibility remains to be inconsistent. This study aimed to provide a more precise estimation of the relationship between lncRNA H19 polymorphisms and the risk of cancer based on all available published studies. 53 studies encompassing 32,376 cases and 43,659 controls were included in our meta-analysis by searching the Pubmed, Embase, Web of Science, WanFang, and China National Knowledge Infrastructure databases. Pooled ORs and their 95% CIs were used to estimate the strength between the SNPs in H19 (rs217727, rs2839698, rs2107425, rs3024270, rs2735971, rs3741216, and rs3741219) and cancer susceptibility. The results showed that H19 rs2839698 polymorphism was associated with increased cancer risk in all participants under three genetic models. However, no significant association was identified between the other six SNPs as well as an overall cancer risk. Stratification by ethnicity showed that rs2839698 mutation indicated to be an important hazardous factor for the Asian population. While rs2107425 mutation had a protective effect on the Caucasian population. Stratification by cancer type identified that rs217727 mutation was linked to increased susceptibility to oral squamous cell carcinoma, lung cancer, and hepatocellular carcinoma; whereas rs2839698 mutation was associated with an elevated risk of hematological tumor and digestive system tumor (p < 0.05). Besides, the rs2735971 mutation was connected with the digestive system tumor. In summary, the rs217727, rs2839698, rs2107425 and rs2735971 polymorphisms in H19 have associations with cancer susceptibility.
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- 2022
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7. Corrigendum: Artesunate Suppresses Choroidal Melanoma Vasculogenic Mimicry Formation and Angiogenesis via the Wnt/CaMKII Signaling Axis
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Bochao Geng, Yuanzhang Zhu, Yingying Yuan, Jingyi Bai, Zhizhi Dou, Aihua Sui, and Wenjuan Luo
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artesunate ,choroidal melanoma ,vasculogenesis mimicry ,angiogenesis ,VE-cadherin ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2022
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8. Evolution of the earthworm (Eisenia fetida) microbial community in vitro and in vivo under tetracycline stress
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Yucui Ning, Yunfei Li, Xiaojuan Li, Ziyi Shao, Hongtai Fu, Yingying Yuan, and Dongxing Zhou
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Antibiotic ,Eisenia fetida ,Microbial community ,Factor analysis ,Toxicity effects ,Environmental pollution ,TD172-193.5 ,Environmental sciences ,GE1-350 - Abstract
Bioremediation of contaminated soil has received increasing attention, and the effects of antibiotic residues on the soil ecological environment are a current research hotspot. Earthworms are the first choice of soil organisms to indicate the degree of soil pollution, and their detoxification mechanism after antibiotic stress must be further explored. Taking Eisenia fetida as the research object, an antibiotic (tetracycline) stress test was carried out in sterile artificial soil. The stress concentrations were set at 0, 0.3, 3, 30, 300 and 600 mg/kg. The ECO method was used to cultivate microbes in earthworms and soil. The carbon source utilization intensity algorithm developed by our team was used for data statistics, and a factor analysis model was constructed to explore the succession process of microbes of earthworms in vivo and in vitro under tetracycline stress. The results showed that there were four processes in the evolution of microbes under short-term tetracycline stress: at 1–3 days, the microbes in worms played a leading role; at 4–5 days, the microbes in the worms and the soil microbes jointly resisted TET stress; after 6–8 days of stress, the microbes in worms still played the main role, but their role was weakened; and after 9–10 days, soil microbes played a leading role, and tolerant microbes appeared. Under long-term stress, the microbes of earthworms in vivo and in vitro were obvious different, and there may be no regulatory relationship. And the factor analysis model is suitable for the analyse of the changes in microbial communities in vivo and in vitro under TET stress. The research results provide a reference method and model basis for the bioremediation of antibiotic-contaminated soil and the study of earthworm detoxification mechanisms, and help agricultural development.
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- 2022
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9. Flexible Wearable Sensors in Medical Monitoring
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Yingying Yuan, Bo Liu, Hui Li, Mo Li, Yingqiu Song, Runze Wang, Tianlu Wang, and Hangyu Zhang
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flexible wearable sensors ,physiological signal monitoring ,flexible substrates ,printing technology ,self-power ,Biotechnology ,TP248.13-248.65 - Abstract
The popularity of health concepts and the wave of digitalization have driven the innovation of sensors in the medical field. Such continual development has made sensors progress in the direction of safety, flexibility, and intelligence for continuous monitoring of vital signs, which holds considerable promise for changing the way humans live and even treat diseases. To this end, flexible wearable devices with high performance, such as high sensitivity, high stability, and excellent biodegradability, have attracted strong interest from scientists. Herein, a review of flexible wearable sensors for temperature, heart rate, human motion, respiratory rate, glucose, and pH is highlighted. In addition, engineering issues are also presented, focusing on material selection, sensor fabrication, and power supply. Finally, potential challenges facing current technology and future directions of wearable sensors are also discussed.
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- 2022
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10. Artesunate Suppresses Choroidal Melanoma Vasculogenic Mimicry Formation and Angiogenesis via the Wnt/CaMKII Signaling Axis
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Bochao Geng, Yuanzhang Zhu, Yingying Yuan, Jingyi Bai, Zhizhi Dou, Aihua Sui, and Wenjuan Luo
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artesunate ,choroidal melanoma ,vasculogenesis mimicry ,angiogenesis ,VE-cadherin ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Angiogenesis and vasculogenic mimicry (VM) are considered to be the main processes to ensure tumor blood supply during the proliferation and metastasis of choroidal melanoma (CM). The traditional antimalarial drug artesunate (ART) has some potential anti-CM effects; however, the underlying mechanisms remain unclarified. Recent studies have shown that the Wnt5a/calmodulin-dependent kinase II (CaMKII) signaling pathway has a close correlation with angiogenesis and VM formation. This study demonstrated that ART eliminated VM formation by inhibiting the aforementioned signaling pathway in CM cells. The microvessel sprouting of the mouse aortic rings and the microvessel density of chicken chorioallantoic membrane (CAM) decreased significantly after ART treatment. VM formation assay and periodic acid schiff (PAS) staining revealed that ART inhibited VM formation in CM. Moreover, ART downregulated the expression levels of the angiogenesis-related proteins vascular endothelial growth factor receptor (VEGFR) 2, platelet-derived growth factor receptor (PDGFR) and vascular endothelial growth factor (VEGF) A, and VM-related proteins ephrin type-A receptor (EphA) 2 and vascular endothelial (VE)-cadherin. The expression of hypoxia-inducible factor (HIF)-1α, Wnt5a, and phosphorylated CaMKII was also downregulated after ART treatment. In addition, we further demonstrated that ART inhibited the proliferation, migration, and invasion of OCM-1 and C918 cells. Collectively, our results suggested that ART inhibited angiogenesis and VM formation of choroidal melanoma likely by regulating the Wnt5a/CaMKII signaling pathway. These findings further supported the feasibility of ART for cancer therapy.
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- 2021
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11. Structural characteristics and proximity comparison of China's urban innovation cooperation network.
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Yingying Yuan and Zenglin Han
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Medicine ,Science - Abstract
How to promote and improve the level of urban innovation cooperation is a major issue in China's current high-quality economic development. Thus, enhancing innovation ability is essential to achieving high-quality economic growth under the "new normal". Based on the data of Chinese invention patents from 1985 to 2017, this paper analyzes the characteristics of China's urban innovation cooperation network and the different roles of proximity by using social network analysis and exploratory spatial data analysis methods. The analysis results show that: (1) On the whole, the development of China's urban innovation cooperation network is characterized by stages (initial development stage, rapid development stage, and gradual decline stage); The urban innovation cooperation network has strong connectivity and centripetal concentration but its imbalance needs to be further improved; The degree of urban participation has gradually increased, consolidating the stability of the network structure. (2) The centrality of urban innovation cooperation network has obvious characteristics of administrative center orientation, coastal areas orientation, and 'strong east and weak west'; Beijing is the center and bridge of the network, and the network flattening characteristics are obvious; A hierarchical 'core-edge' structure is gradually formed for the urban innovation cooperation network, and the pyramid structure with Beijing standing at the top is being consolidated. (3) The geographical proximity presents a significant global spatial positive correlation, while the network proximity and pure network proximity have a more significant global spatial negative correlation; The local spatial autocorrelation of China's urban innovation cooperation system based on network proximity is more obvious and identifiable than that based on the geographical proximity, which better reflects the new development model of "relationship economy".
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- 2021
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12. Collaborative multicenter logistics delivery network optimization with resource sharing.
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Shejun Deng, Yingying Yuan, Yong Wang, Haizhong Wang, and Charles Koll
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Medicine ,Science - Abstract
Collaboration among logistics facilities in a multicenter logistics delivery network can significantly improve the utilization of logistics resources through resource sharing including logistics facilities, vehicles, and customer services. This study proposes and tests different resource sharing schemes to solve the optimization problem of a collaborative multicenter logistics delivery network based on resource sharing (CMCLDN-RS). The CMCLDN-RS problem aims to establish a collaborative mechanism of allocating logistics resources in a manner that improves the operational efficiency of a logistics network. A bi-objective optimization model is proposed with consideration of various resource sharing schemes in multiple service periods to minimize the total cost and number of vehicles. An adaptive grid particle swarm optimization (AGPSO) algorithm based on customer clustering is devised to solve the CMCLDN-RS problem and find Pareto optimal solutions. An effective elite iteration and selective endowment mechanism is designed for the algorithm to combine global and local search to improve search capabilities. The solution of CMCLDN-RS guarantees that cost savings are fairly allocated to the collaborative participants through a suitable profit allocation model. Compared with the computation performance of the existing nondominated sorting genetic algorithm-II and multi-objective evolutionary algorithm, AGPSO is more computationally efficient. An empirical case study in Chengdu, China suggests that the proposed collaborative mechanism with resource sharing can effectively reduce total operational costs and number of vehicles, thereby enhancing the operational efficiency of the logistics network.
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- 2020
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13. Design and Profit Allocation in Two-Echelon Heterogeneous Cooperative Logistics Network Optimization
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Yong Wang, Yingying Yuan, Kevin Assogba, Ke Gong, Haizhong Wang, Maozeng Xu, and Yinhai Wang
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Transportation engineering ,TA1001-1280 ,Transportation and communications ,HE1-9990 - Abstract
In modern supply chain, logistics companies usually operate individually and optimization researches often concentrate on solving problems related to separate networks. Consequences like the complexity of urban transportation networks and long distance deliveries or pickups and pollution are leading problems to more expenses and more complaints from environment protection organizations. A solution approach to these issues is proposed in this article and consists in the adoption of two-echelon heterogeneous cooperative logistics networks (THCLN). The optimization methodology includes the formation of cooperative coalitions, the reallocation of customers to appropriate logistics facilities, and the determination of the best profit allocation scheme. First, a mixed integer linear programing model is introduced to minimize the total operating cost of nonempty coalitions. Thus, the Genetic Algorithm (GA) and the Particle Swarm Optimization (PSO) algorithm are hybridized to propose GA-PSO heuristics. GA-PSO is employed to provide good solutions to customer clustering units’ reallocation problem. In addition, a negotiation process is established based on logistics centers as coordinators. The case study of Chongqing city is conducted to verify the feasibility of THCLN in practice. The grand coalition and two heterogeneous subcoalitions are designed, and the collective profit is distributed based on cooperative game theory. The Minimum Cost Remaining Savings (MCRS) model is used to determine good allocation schemes and strictly monotonic path principles are considered to evaluate and decide the most appropriate coalition sequence. Comparisons proved the combination of GA-PSO and MCRS better as results are found closest to the core center. Therefore, the proposed approach can be implemented in real world environment, increase the reliability of urban logistics network, and allow decision makers to improve service efficiency.
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- 2018
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14. A Terrain Feature Guided-Diffusion Model for Void Filling of Digital Elevation Models.
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Yingying Yuan, Ji Zhao 0006, Changliang Shao, and Yuting Dong
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- 2024
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15. A co-innovation network in Northeast China oriented to high-quality development.
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Yingying Yuan, Zenglin Han, and Wenyi Yang
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- 2023
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16. Quantum behaved particle swarm optimization of inbound process in an automated warehouse.
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Yingying Yuan, Lu Zhen, Jingwen Wu, and Xiao Fan Wang 0001
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- 2023
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17. Scheduling multiple types of equipment in an automated warehouse.
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Lu Zhen, Jingwen Wu, Haolin Li, Zheyi Tan, and Yingying Yuan
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- 2023
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18. A decision method on yard cranes transformation and deployment in green ports.
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Zheyi Tan, Qian Zhang 0077, Yingying Yuan, and Ying Jin
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- 2022
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19. Towards Efficient Pairwise Ranking for Service Using Multidimensional Classification.
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Yingying Yuan, Jiwei Huang, Yeping Zhu, and Yufei Hu
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- 2019
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20. An Online Computation Offloading with Energy-Harvesting in Mobile ad Hoc Network.
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Weiping Wang, Guangsheng Feng, Bingyang Li, Yingying Yuan, Quanming Li, Hongwu Lv, and Qian Zhao
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- 2019
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21. A Near-Optimal Resource Allocation Approach to Computation Offloading Under D2D Communications.
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Yingying Yuan, Guangsheng Feng, Hongwu Lv, Weiping Wang, Quanming Li, Di He, and Huiqiang Wang
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- 2019
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22. Rapid and visual detection of benzoyl peroxide in cosmetics by a colorimetric method
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Yalei Dong, Yasen Qiao, Yingying Yuan, Haiyan Wang, Lei Sun, and Cuiling Ren
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General Chemical Engineering ,Materials Chemistry ,General Chemistry ,Biochemistry ,Industrial and Manufacturing Engineering - Published
- 2023
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23. Enhanced driving force and charge separation efficiency of protonated anthraquinone for C–H photooxygenation of alkanes by proton-coupled electron transfer
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Hui Yin, Yingying Yuan, Yangbin Li, Jing Tang, Wenzhou Zhong, and Liqiu Mao
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Environmental Chemistry ,Pollution - Abstract
We demonstrated a novel “donor–acceptor” strategy for boosting the aerobic visible-light photocatalytic C–H oxygenation of unactivated alkanes, through the protonation of anthraquinones by Brønsted acids.
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- 2023
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24. Quantum behaved particle swarm optimization of inbound process in an automated warehouse
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Yingying Yuan, Lu Zhen, Jingwen Wu, and Xiaofan Wang
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Marketing ,Strategy and Management ,Management Science and Operations Research ,Management Information Systems - Published
- 2022
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25. Scheduling multiple types of equipment in an automated warehouse
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Lu Zhen, Jingwen Wu, Haolin Li, Zheyi Tan, and Yingying Yuan
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General Decision Sciences ,Management Science and Operations Research - Published
- 2022
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26. The 3D-simulation implementation of parking guidance system.
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Yingying Yuan and Kai Liu
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- 2014
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27. Benders decomposition for internal truck renewal decision in green ports
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Lu Zhen, Ying Jin, Yiwei Wu, Yingying Yuan, and Zheyi Tan
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Geography, Planning and Development ,Ocean Engineering ,Transportation ,Management, Monitoring, Policy and Law - Published
- 2022
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28. Separation and identification of degradation impurities of esomeprazole sodium
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Chuan Xiao, Yingying Yuan, Jianwang Li, Yehua Han, Jiamin Shi, Wei Zeng, Xiaolong Zu, Huijie Jin, Ru Jiang, and Shouhai Ni
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Pharmacology ,Clinical Biochemistry ,Drug Discovery ,General Medicine ,Molecular Biology ,Biochemistry ,Analytical Chemistry - Published
- 2023
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29. Non-permutation flow shop scheduling with order acceptance and weighted tardiness.
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Yiyong Xiao, Yingying Yuan, Ren-Qian Zhang, and Abdullah Konak
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- 2015
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30. A co-innovation network in Northeast China oriented to high-quality development
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Yingying Yuan, Wenyi Yang, and Zenglin Han
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Co innovation ,Strategy and Management ,Business ,Economic geography ,Management Science and Operations Research ,China ,Quality development - Abstract
Innovation is the primary driving force and important support for Northeast China’s revitalisation strategy to move toward ‘high-quality development’. Based on 1985–2016 data, this study aimed to e...
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- 2021
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31. FOXP3 promotes cell proliferation and metastases via the Wnt5a/CaMKII signaling pathway in choroidal melanoma
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Yingying Yuan, Qingyue Ma, Ruining Gong, Wenying Wang, Ningning Yao, Han Zhao, Ke Lei, Weiwei Fu, Aihua Sui, Xiaoling Yu, and Wenjuan Luo
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Background: Choroidal melanoma (CM) accounts for 70% of uveal melanomas and is prone to metastasize and invade. Previous studies have reported that forkhead box protein 3 (FOXP3) is associated with carcinogenesis, however, the effect of FOXP3 on CM remains unclear. The purpose of the study is to explore the role of FOXP3 in the progression of CM and to elucidate its related mechanisms. Methods: FOXP3 protein expression was detected in CM clinical specimens and CM cells. We then established a cell line with stable FOXP3 knockout as well as a cell line that transiently overexpressed FOXP3, and their transfection efficiencies were detected by Western blotting (WB). The effects of FOXP3 on cell biological functions and epithelial-mesenchymal transition (EMT) in CM were verified via the CCK-8 assay, monoclonal formation assay, migration and invasion assays, WB and tumorigenesis assay in nude mice in vivo. We also demontrated that FOXP3 promoted CM development through the Wnt5a/CaMKII signaling pathway. Results: The level of FOXP3 was found to be upregulated in CM clinical specimens and CM cells. The overexpression of FOXP3 promoted the proliferation, migration, invasion, and EMT process of CM cells in vitro, while the knockdown of FOXP3 inhibited these cell functions in vitro and tumor growth in vivo. In addition, FOXP3 was found promoting the progression of CM, including EMT, through the Wnt5a/CaMKII signaling pathway. Conclusion: This study demonstrated that FOXP3 promoted the development of choroidal melanoma through the Wnt5a/CaMKII signaling pathway as an oncogenic factor of CM, and thereby provides a novel potential target for the pathogenesis of CM.
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- 2022
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32. Outage Probability of N-th Best User Selection in Multiuser Two-Way Relay Networks over Nakagami-m Fading.
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Jie Yang, Yingying Yuan, Nan Yang 0006, Kai Yang 0004, and Xiaofei Zhang
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- 2014
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33. Clinical Value of Contrast-Enhanced Ultrasound in Breast Cancer Diagnosis
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Yingying Yuan, Ming Xu, Yi Ren, Lili He, Jiejie Chen, and Li Sun
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Diagnosis, Differential ,Article Subject ,General Immunology and Microbiology ,Applied Mathematics ,Modeling and Simulation ,Humans ,Reproducibility of Results ,Breast Neoplasms ,Female ,General Medicine ,Breast ,General Biochemistry, Genetics and Molecular Biology ,Ultrasonography - Abstract
Breast cancer (BC) ranks first in morbidity and mortality among female malignant tumors worldwide. This study is aimed at clarifying clinical value of contrast-enhanced ultrasound (CEUS) in the diagnosis and differentiation of BC. A total of 108 BC patients admitted to our hospital from January 2019 to December 2021 were enrolled. All patients underwent conventional color Doppler ultrasound and CEUS imaging examination. All ultrasound images were analyzed by a senior (5+ years) sonographer. The lesion location, echo, size, and color Doppler flow imaging (CDFI) blood flow distribution of benign and malignant BC were assessed. The transverse and longitudinal diameters of malignant BC presented significant elevation compared with the control group ( P < 0.05 ). CEUS is more reliable than conventional ultrasound in the differentiation of benign and malignant breast lesions, and CEUS has the best reliability. The comparison of CEUS observation indicators between benign and malignant groups demonstrated that CEUS enhancement patterns (time and intensity) and morphological features (lesion boundary, shape, range, homogeneity, and filling defect) presented statistical significance ( P < 0.01 ). Irregular shape and range expansion were high-specificity indicators (all >90.00%); fast-forward, high enhancement, clear boundary, and range expansion were high-sensitivity (all >90.00%); and fast-forward, high enhancement, and clear boundary were low-specificity indicators (all 80.00%). The area under curve of CEUS ( 0.735 ± 0.053 ) presented elevation relative to conventional ultrasound ( 0.901 ± 0.024 ), with statistical significance ( Z 1 = 2.462 , P < 0.05 ). Relative to conventional ultrasound, the specificity and positive predictive value of CEUS presented elevation ( P < 0.05 ). In conclusion, in the differentiation of benign and malignant breast lesions, CEUS has better diagnostic accuracy and reliability than conventional ultrasound. The diagnostic advantages of CEUS are to elevate the diagnostic specificity and positive predictive value and reduce the misdiagnosis rate.
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- 2022
34. A decision method on yard cranes transformation and deployment in green ports
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Qian Zhang, Zheyi Tan, Ying Jin, and Yingying Yuan
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Yard ,Transformation (function) ,Operations research ,Software deployment ,Computer science ,Management of Technology and Innovation ,Strategy and Management ,Management Science and Operations Research ,Business and International Management ,Decision model ,Computer Science Applications - Published
- 2021
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35. Application of The Virtual Torque Coefficient in Stability Mechanism Analysis of Grid-Forming VSC
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Ni Liu, Hong Wang, Haoxi Xiang, HeXi Shi, Yingying Yuan, and Zhe Chen
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- 2022
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36. Subsidy Strategy Design for Shore Power Utilization and Promotion
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Lu Zhen, Yingying Yuan, Dan Zhuge, Harilaos N. Psaraftis, and Shuaian Wang
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- 2022
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37. Dual VEGF/PDGF knockdown suppresses vasculogenic mimicry formation in choroidal melanoma cells via the Wnt5a/β-catenin/AKT signaling pathway
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Yingying Yuan, Bochao Geng, Xiaoyan Xu, Han Zhao, Jingyi Bai, Zhizhi Dou, Shaoyou Jia, Xiaoling Yu, and Wenjuan Luo
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Platelet-Derived Growth Factor ,Vascular Endothelial Growth Factor A ,Histology ,Neovascularization, Pathologic ,Cell Line, Tumor ,Humans ,Cell Biology ,General Medicine ,Melanoma ,Proto-Oncogene Proteins c-akt ,Wnt-5a Protein ,beta Catenin ,Signal Transduction - Abstract
This study aimed to explore the effects of knocking down both vascular endothelial growth factor (VEGF) and platelet derived growth factor (PDGF) on vasculogenic mimicry (VM) formation in choroidal melanoma (CM) cells.Cell counting Kit (CCK)-8, monoclonal formation, wound healing, transwell and flow cytometry assays were used to observe the cell effects in CM cell line, ocular choroidal melanoma-1 cells (OCM-1) with respect to proliferation, migration, invasion and apoptosis. Three-dimensional (3D) cultures were also used to characterize VM tube structural effects in OCM-1 cells and western blotting was used to characterize protein expression changes in VM-related markers.Dual VEGF/PDGF knockdown suppressed cell proliferation, migration and invasion, but promoted cell apoptosis. It also reduced VM tube structures in OCM-1 cells. VM associated markers including, VE-cadherin, EphA2 and MT1-MMP were also down-regulated in OCM-1 cells. Similarly, Wnt5a, β-catenin and phosphorylated-AKT levels were also down-regulated. Western blotting and 3D cultures further demonstrated that combined Wnt5a silencing with dual VEGF/PDGF knockdown significantly decreased VE-cadherin and EphA2 levels and reduced VM tube structures in OCM-1 cells.Dual VEGF/PDGF knockdown suppressed cell growth and metastasis in OCM-1 cells, and blocked the Wnt5a/β-catenin/AKT signaling pathway thereby inhibiting VM formation.
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- 2021
38. Artesunate Suppresses Choroidal Melanoma Vasculogenic Mimicry Formation and Angiogenesis via the Wnt/CaMKII Signaling Axis
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Aihua Sui, Zhizhi Dou, Wenjuan Luo, Jingyi Bai, Yuanzhang Zhu, Bochao Geng, and Yingying Yuan
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Cancer Research ,biology ,Angiogenesis ,Wnt signaling pathway ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,vasculogenesis mimicry ,Vascular endothelial growth factor ,chemistry.chemical_compound ,angiogenesis ,VE-cadherin ,Oncology ,chemistry ,Growth factor receptor ,Ca2+/calmodulin-dependent protein kinase ,Cancer research ,biology.protein ,Ephrin ,Vasculogenic mimicry ,artesunate ,choroidal melanoma ,Platelet-derived growth factor receptor ,RC254-282 ,Original Research - Abstract
Angiogenesis and vasculogenic mimicry (VM) are considered to be the main processes to ensure tumor blood supply during the proliferation and metastasis of choroidal melanoma (CM). The traditional antimalarial drug artesunate (ART) has some potential anti-CM effects; however, the underlying mechanisms remain unclarified. Recent studies have shown that the Wnt5a/calmodulin-dependent kinase II (CaMKII) signaling pathway has a close correlation with angiogenesis and VM formation. This study demonstrated that ART eliminated VM formation by inhibiting the aforementioned signaling pathway in CM cells. The microvessel sprouting of the mouse aortic rings and the microvessel density of chicken chorioallantoic membrane (CAM) decreased significantly after ART treatment. VM formation assay and periodic acid schiff (PAS) staining revealed that ART inhibited VM formation in CM. Moreover, ART downregulated the expression levels of the angiogenesis-related proteins vascular endothelial growth factor receptor (VEGFR) 2, platelet-derived growth factor receptor (PDGFR) and vascular endothelial growth factor (VEGF) A, and VM-related proteins ephrin type-A receptor (EphA) 2 and vascular endothelial (VE)-cadherin. The expression of hypoxia-inducible factor (HIF)-1α, Wnt5a, and phosphorylated CaMKII was also downregulated after ART treatment. In addition, we further demonstrated that ART inhibited the proliferation, migration, and invasion of OCM-1 and C918 cells. Collectively, our results suggested that ART inhibited angiogenesis and VM formation of choroidal melanoma likely by regulating the Wnt5a/CaMKII signaling pathway. These findings further supported the feasibility of ART for cancer therapy.
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- 2021
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39. Acid-Catalyzed Synthesis of Quinoline Derivatives from 2-Methylquinolines and 2-Aryloxy/Alkoxybenzaldehyde in Aqueous Medium
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Xiaodong Tang, Yinrong Wu, Jiaping Huang, Yingying Yuan, Zhongzhi Zhu, Qiaorun Zhao, Xianchen Lu, En Liang, and Hang Wang
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chemistry.chemical_compound ,Nucleophilic addition ,Aqueous medium ,Chemistry ,Acid catalyzed ,Organocatalysis ,Organic Chemistry ,Quinoline ,Organic chemistry ,Physical and Theoretical Chemistry - Published
- 2019
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40. Constructing a Novel Signature Based on Immune-Related lncRNA to Improve Prognosis Prediction of Cervical Squamous Cell Carcinoma Patients
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Mengle Peng, Pengxiang Li, Dongchun Qin, Xuefeng Lv, Huifang Jin, Lu Liu, and Yingying Yuan
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Prognosis prediction ,Cervical Squamous Cell Carcinoma ,Databases, Factual ,Models, Genetic ,business.industry ,Gene Expression Profiling ,Obstetrics and Gynecology ,Uterine Cervical Neoplasms ,Prognosis ,Gene Expression Regulation, Neoplastic ,Immune system ,Cancer research ,Carcinoma, Squamous Cell ,Medicine ,Humans ,Female ,RNA, Long Noncoding ,business - Abstract
We downloaded gene expression data, clinical data, and somatic mutation data of cervical squamous cell carcinoma (CSCC) patients from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) databases. Predictive lncRNAs were screened using univariate analysis and least absolute shrinkage and selection operator (LASSO) regression, and risk scores were calculated for each patient according to the expression levels of lncRNAs and regression coefficients to establish a risk model that could be a novel signature. We assessed the correlation between immune infiltration status, chemotherapeutics sensitivity, immune checkpoint proteins (ICP), and the signature. Therefore, we selected 11 immune-related lncRNAs (WWC2,AS2, STXBP5.AS1, ERICH6.AS1, USP30.AS1, LINC02073, RBAKDN, IL21R.AS1, LINC02078, DLEU1, LINC00426, BOLA3.AS1) to construct the risk model. Patients who were in the high-risk group had a shorter survival time than those in the low-risk group (p 0.001). Risk scores in the signature were negatively correlated with macrophage M1, macrophage M2, and T cell CD8 + ; what's more, T cell CD8 + was higher in the low-risk group. The expression levels of ICP such as PD-L1, PD-1, CTLA-4, TIGIT, LAG-3, and TIM-3 were substantially higher in the low-risk group. For chemotherapeutic agents, high-risk scores were associated with higher half-inhibitory concentrations (IC50) of cisplatin. These findings suggested that the risk model can be a novel signature for predicting CSCC patients' prognosis, and it also can be used to formulate clinical treatment plans for CSCC patients.
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- 2021
41. Structural characteristics and proximity comparison of China's urban innovation cooperation network
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Zenglin Han and Yingying Yuan
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Computer and Information Sciences ,China ,Asia ,Science ,0211 other engineering and technologies ,Social Sciences ,02 engineering and technology ,Human Geography ,Bridge (interpersonal) ,Urban Geography ,Geographical Locations ,Urban geography ,Beijing ,Inventions ,0502 economics and business ,Geoinformatics ,Humans ,Industry ,Centrality ,Economic geography ,050207 economics ,Spatial analysis ,Patents ,Geographic Areas ,Multidisciplinary ,Geography ,05 social sciences ,Social network analysis (criminology) ,021107 urban & regional planning ,Spatial Autocorrelation ,Models, Economic ,People and Places ,Earth Sciences ,Medicine ,Law and Legal Sciences ,Business ,Economic Development ,Commercial Law ,Network Analysis ,Network analysis ,Research Article ,Urban Areas - Abstract
How to promote and improve the level of urban innovation cooperation is a major issue in China’s current high-quality economic development. Thus, enhancing innovation ability is essential to achieving high-quality economic growth under the "new normal". Based on the data of Chinese invention patents from 1985 to 2017, this paper analyzes the characteristics of China’s urban innovation cooperation network and the different roles of proximity by using social network analysis and exploratory spatial data analysis methods. The analysis results show that: (1) On the whole, the development of China’s urban innovation cooperation network is characterized by stages (initial development stage, rapid development stage, and gradual decline stage); The urban innovation cooperation network has strong connectivity and centripetal concentration but its imbalance needs to be further improved; The degree of urban participation has gradually increased, consolidating the stability of the network structure. (2) The centrality of urban innovation cooperation network has obvious characteristics of administrative center orientation, coastal areas orientation, and ‘strong east and weak west’; Beijing is the center and bridge of the network, and the network flattening characteristics are obvious; A hierarchical ‘core-edge’ structure is gradually formed for the urban innovation cooperation network, and the pyramid structure with Beijing standing at the top is being consolidated. (3) The geographical proximity presents a significant global spatial positive correlation, while the network proximity and pure network proximity have a more significant global spatial negative correlation; The local spatial autocorrelation of China’s urban innovation cooperation system based on network proximity is more obvious and identifiable than that based on the geographical proximity, which better reflects the new development model of "relationship economy".
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- 2021
42. A Near-Optimal Resource Allocation Approach to Computation Offloading Under D2D Communications
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Di He, Guangsheng Feng, Yingying Yuan, Hongwu Lv, Huiqiang Wang, Weiping Wang, and Quanming Li
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Mathematical optimization ,Computer science ,Wireless network ,020302 automobile design & engineering ,020206 networking & telecommunications ,02 engineering and technology ,Energy consumption ,Task (project management) ,0203 mechanical engineering ,Convex optimization ,0202 electrical engineering, electronic engineering, information engineering ,Computation offloading ,Overhead (computing) ,Resource allocation ,Integer (computer science) - Abstract
We study the problem of task offloading and resource allocation (TORA) in wireless networks, where mobile devices (MDs) with insufficient resources, e.g., energy and computing resources, can offload their computation tasks to other available MDs using device to device (D2D) communications. The TORA problem is formulated as a Mixed Integer Non-linear Programming (MINLP) problem, which aims at minimizing the overall overhead of task completion time and energy consumption. Since the problem is NP hard, it is very challenging to solve it using conventional methods with the number of MDs increasing. To address this issue, we first decouple the primal problem into (i) a resource allocation problem with fixed offloading decision, and (ii) a task offloading problem with an optimal-value function of resource allocation problem. Next, we address them with quasi-convex and convex optimization techniques, respectively. Finally, we design a TORA algorithm to solve the primal problem and obtain the solution of primal problem. Simulation results show that the proposed scheme can reduce the overall overhead.
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- 2019
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43. An Online Computation Offloading with Energy-Harvesting in Mobile ad Hoc Network
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Guangsheng Feng, Yingying Yuan, Weiping Wang, Qian Zhao, Hongwu Lv, Bingyang Li, and Quanming Li
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Computer science ,Profit maximization ,Distributed computing ,Node (networking) ,020208 electrical & electronic engineering ,Computer Science::Networking and Internet Architecture ,0202 electrical engineering, electronic engineering, information engineering ,Computation offloading ,020206 networking & telecommunications ,Lyapunov optimization ,02 engineering and technology ,Mobile ad hoc network ,Task (project management) - Abstract
In this paper, we study the computation offloading problem in a mobile ad hoc network (MANET) scenario, where the network nodes can cooperatively help each other to fulfill computation tasks, and the energy-harvesting technology is also considered to overcome possible energy-exhausted issues. To tradeoff energy-harvesting and consumption, the problem of task offloading and energy-harvesting is formulated as a stochastic time-average profit maximization problem, in which the objective is to achieve optimal values of offloading policy and the length of energy-harvesting phase at each time slot. Owing to the lack of future information, e.g., task arrival, link bandwidth and ability of energy-harvesting, an online task offloading algorithm based on Lyapunov optimization is developed, which can convent the primal problem into a drift-minus-profit infimum bound minimization problem. Simulation results show that the proposed approach achieves a near-optimal solution.
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- 2019
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44. Collaborative Mechanism for Pickup and Delivery Problems with Heterogeneous Vehicles under Time Windows
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Yong Wang, Xiangyang Guan, Yong Liu, Haizhong Wang, Maozeng Xu, and Yingying Yuan
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Mathematical optimization ,Linear programming ,Total cost ,Computer science ,lcsh:TJ807-830 ,Geography, Planning and Development ,lcsh:Renewable energy sources ,0211 other engineering and technologies ,profit distribution strategy ,02 engineering and technology ,Management, Monitoring, Policy and Law ,Pickup and delivery ,Profit (economics) ,Supply and demand ,logistics network ,0202 electrical engineering, electronic engineering, information engineering ,Cluster analysis ,lcsh:Environmental sciences ,lcsh:GE1-350 ,021103 operations research ,Renewable Energy, Sustainability and the Environment ,lcsh:Environmental effects of industries and plants ,Shapley value ,composite algorithm ,lcsh:TD194-195 ,collaborative mechanism ,Sustainability ,020201 artificial intelligence & image processing ,Dijkstra's algorithm - Abstract
The sustainability and complexity of logistics networks come from the temporally and spatially uneven distributions of freight demand and supply. Operation strategies without considering the sustainability and complexity could dramatically increase the economic and environmental costs of logistics operations. This paper explores how the unevenly distributed demand and supply can be optimally matched through collaborations, and formulates and solves a Collaborative Pickup and Delivery Problem under Time Windows (CPDPTW) to optimize the structures of logistics networks and improve city sustainability and liverability. The CPDPTW is a three-stage framework. First, a multi-objective linear optimization model that minimizes the number of vehicles and the total cost of logistics operation is developed. Second, a composite algorithm consisting of improved k-means clustering, Demand-and-Time-based Dijkstra Algorithm (DTDA) and Improved Non-dominated Sorting Genetic Algorithm-II (INSGA-II) is devised to solve the optimization model. The clustering algorithm helps to identify the feasible initial solution to INSGA-II. Third, a method based on improved Shapley value model is proposed to obtain the collaborative alliance strategy that achieves the optimal profit allocation strategy. The proposed composite algorithm outperforms existing algorithms in minimizing terms of the total cost and number of electro-tricycles. An empirical case of Chongqing is employed to demonstrate the efficiency of the proposed mechanism for achieving optimality for logistics networks and realizing a win-win situation between suppliers and consumers.
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- 2019
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45. Efficient ternary organic solar cells with energy cascade and Foerster resonance energy transfer by doping phosphorescent small molecule
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Jian Zhong, Yingying Yuan, Pu Fan, Geng Feng, and Qinxue Li
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Materials science ,Organic solar cell ,chemistry ,Doping ,Energy conversion efficiency ,chemistry.chemical_element ,Physical chemistry ,Iridium ,Phosphorescence ,Ternary operation ,Short circuit ,Polymer solar cell - Abstract
In this work, we fabricated the ternary bulk hetero junction (BHJ) polymer solar cells (PSCs) by doping a phosphorescent small molecule bis[2-(4-tertbutylphenyl)benzothiazolato-N,C2′] iridium(acetylacetonate)[(tbt)2Ir(acac)] into the conventional active layer of poly(3-hexylthiophene) (P3HT) and [6,6]-phenyl-C71-butyric acid methyl ester (PC71BM). After doping (tbt)2Ir(acac), the short circuit current and fill factor are simultaneously enhanced compared with binary device and the power conversion efficiency (PCE) of P3HT:PC71BM based ternary devices is improved from 2.99% to 4.14%. More excellent photovoltaic performance of ternary PSCs is mainly attributed to enhanced charge transportation by appropriate energy cascade alignment and enhanced exciton harvesting by Foerster resonance energy transfer from (tbt)2Ir(acac) to P3HT.
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- 2019
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46. A thermally activated delayed fluorescence material for efficient ternary organic solar cells
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Junhe Zheng, Jian Zhong, Yingying Yuan, Qinxue Li, and Geng Feng
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Materials science ,Chemical engineering ,Organic solar cell ,Doping ,Fill factor ,Absorption (chemistry) ,Ternary operation ,Fluorescence ,Active layer - Abstract
In this study, we report the ternary organic solar cells by doping a thermally activated delayed fluorescence (TADF) material (4 s ,6 s )-2,4,5,6-tetra( 9H -carbazol-9-yl) isophthalonitrile (4CzIPN) in the binary poly(3-hexylthiophene) (P3HT) :[6,6]-phenyl-C71-butyric acid methyl ester (PC71BM) blends. Given the complementary absorption with P3HT, 4CzIPN was doped into (P3HT:PC71BM)-based binary blends, and ternary OSCs were developed, The ternary OSCs with 1.0 wt% of 4CzIPN displayed better phase separation of active layer, thus leading to an impressive efficiency of 3.94 % with open-circuit voltage of 0.54 V, short-circuit density of 11.58 mA/cm-2 and fill factor of 63.32%.
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- 2019
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47. Non-doped white organic light-emitting devices consisting of thermally activated delayed fluorescent emitters and ultrathin phosphorescent emitters
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Jian Zhong, Zijun Wang, Geng Feng, Qinxue Li, and Yingying Yuan
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Materials science ,business.industry ,Non doped ,Optoelectronics ,Phosphorescence ,business ,Fluorescence - Published
- 2019
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48. Collaborative multicenter logistics delivery network optimization with resource sharing
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Charles Koll, Yingying Yuan, Shejun Deng, Yong Wang, and Haizhong Wang
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Research Facilities ,Optimization problem ,Inertia ,Operations research ,Computer science ,Total cost ,0211 other engineering and technologies ,Evolutionary algorithm ,Transportation ,02 engineering and technology ,Information Centers ,0202 electrical engineering, electronic engineering, information engineering ,Local search (optimization) ,Vehicle Emissions ,021103 operations research ,Multidisciplinary ,Archives ,Applied Mathematics ,Simulation and Modeling ,Physics ,Classical Mechanics ,Particle swarm optimization ,Grid ,Shared resource ,Physical Sciences ,Costs and Cost Analysis ,Medicine ,Engineering and Technology ,020201 artificial intelligence & image processing ,Algorithms ,Research Article ,Optimization ,China ,Science ,Research and Analysis Methods ,Resource Allocation ,Motion ,Game Theory ,Computational Techniques ,Genetic algorithm ,Cluster analysis ,business.industry ,Genetic Algorithms ,Carbon ,Logistic Models ,Evolutionary Algorithms ,Evolutionary Computation ,business ,Mathematics - Abstract
Collaboration among logistics facilities in a multicenter logistics delivery network can significantly improve the utilization of logistics resources through resource sharing including logistics facilities, vehicles, and customer services. This study proposes and tests different resource sharing schemes to solve the optimization problem of a collaborative multicenter logistics delivery network based on resource sharing (CMCLDN-RS). The CMCLDN-RS problem aims to establish a collaborative mechanism of allocating logistics resources in a manner that improves the operational efficiency of a logistics network. A bi-objective optimization model is proposed with consideration of various resource sharing schemes in multiple service periods to minimize the total cost and number of vehicles. An adaptive grid particle swarm optimization (AGPSO) algorithm based on customer clustering is devised to solve the CMCLDN-RS problem and find Pareto optimal solutions. An effective elite iteration and selective endowment mechanism is designed for the algorithm to combine global and local search to improve search capabilities. The solution of CMCLDN-RS guarantees that cost savings are fairly allocated to the collaborative participants through a suitable profit allocation model. Compared with the computation performance of the existing nondominated sorting genetic algorithm-II and multi-objective evolutionary algorithm, AGPSO is more computationally efficient. An empirical case study in Chengdu, China suggests that the proposed collaborative mechanism with resource sharing can effectively reduce total operational costs and number of vehicles, thereby enhancing the operational efficiency of the logistics network.
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- 2020
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49. Integrated analysis of key microRNAs /TFs /mRNAs/ in HPV-positive cervical cancer based on microRNA sequencing and bioinformatics analysis
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Xiaoqing Shi, Lu Liu, Liuxia Li, Dongchun Qin, Tao Zhu, Bingjie Li, Guanting Lv, Mengle Peng, Yingying Yuan, and Huifang Jin
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0301 basic medicine ,Bioinformatics analysis ,Uterine Cervical Neoplasms ,Computational biology ,Biology ,Pathology and Forensic Medicine ,03 medical and health sciences ,0302 clinical medicine ,microRNA ,medicine ,Humans ,Gene Regulatory Networks ,Protein Interaction Maps ,RNA, Messenger ,CHEK1 ,Gene ,E2F4 ,Cervical cancer ,MicroRNA sequencing ,Papillomavirus Infections ,Computational Biology ,Cell Biology ,medicine.disease ,MicroRNAs ,030104 developmental biology ,030220 oncology & carcinogenesis ,Carcinoma, Squamous Cell ,FOXM1 ,Female ,Transcription Factors - Abstract
Background Cervical squamous cell carcinoma (CESC) is one of the most common malignancies associated with mortality in females. Its onset and prognosis are primarily concerned with persistent infection with high-risk types of human papillomavirus (HPV). However, the molecular mechanisms of HPV-positive CESC remain unclear. Methods In this study, we conducted a high-throughput sequencing to identify differentially expressed miRNAs (DEMs). Besides, three series were selected from the Gene Expression Omnibus (GEO) database to identify differentially expressed genes (DEGs). Then the miRNA-TF-gene regulatory network was constructed using bioinformatic methods. Genes in the network were performed functional enrichment analysis and protein-protein interaction (PPI) network analysis. Ultimately, the expression levels of six key miRNAs, TFs, and mRNAs were validated by 20 HPV-positive CESC tissues and 15 normal cervical samples. Results A total of 52 DEMs and 300 DEGs differed between the HPV-positive CESC and normal cervical samples. Then the miRNA-TF-gene regulatory network was constructed consisting of 22 miRNAs, 6 TFs, and 76 corresponding genes, among which miR-149-5p, miRNA-1248 and E2F4 acted as key regulators. PPI network analysis showed that ten genes including TOP2A, AURKA, CHEK1, KIF11, MCM4, MKI67, DTL, FOXM1, SMC4, and FBXO5 were recognized as hub genes with the highest connectivity degrees. Besides, five key molecules miRNA-149-5p, E2F4, KIF11, DTL, and SMC4 were suggested to play crucial roles in the development of HPV-positive CESC. Conclusion These results present a unique insight into the pathological mechanisms of HPV-positive CESC and possibly provides potential therapeutic targets.
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- 2020
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50. Collaborative two-echelon multicenter vehicle routing optimization based on state–space–time network representation
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Xiangyang Guan, Yong Liu, Haizhong Wang, Yong Wang, Yingying Yuan, Li Wang, and Maozeng Xu
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Linear programming ,Operations research ,Renewable Energy, Sustainability and the Environment ,Computer science ,Total cost ,020209 energy ,Strategy and Management ,05 social sciences ,02 engineering and technology ,Building and Construction ,Service provider ,Network operations center ,Industrial and Manufacturing Engineering ,Shared resource ,Dynamic programming ,Vehicle routing problem ,050501 criminology ,0202 electrical engineering, electronic engineering, information engineering ,Cluster analysis ,0505 law ,General Environmental Science - Abstract
Collaboration among service providers in a logistics network can greatly increase their operation efficiencies and reduce transportation emissions. This study proposes, formulates and solves a collaborative two-echelon multicenter vehicle routing problem based on a state–space–time (CTMCVRP-SST) network to facilitate collaboration and resource sharing in a multiperiod state–space–time (SST) logistics network. The CTMCVRP-SST aims to facilitate collaboration in logistics networks by leveraging the spatial-temporal properties of logistics demands and resources to optimize the distribution of logistics resources in space and time to meet logistics demands. A three-component solution framework is proposed to solve CTMCVRP-SST. First, a bi-objective linear programming model based on resource sharing in a multiperiod SST network is formulated to minimize the number of vehicles and the total cost of the collaborative operation. Second, an integrated algorithm consisting of SST-based dynamic programming (DP), improved K-means clustering and improved non-dominated sorting genetic algorithm-II (Im-NSGAII) is developed to obtain optimal routes. Third, a cost gap allocation model is employed to design a collaborative mechanism that encourages cooperation among logistics service providers. Using this solution framework, the coalition sequences (i.e., the order of each logistics provider joining a collaborative coalition) are designed and the stability of the coalitions based on profit allocations is studied. Results show that the proposed algorithm outperforms existing algorithms in minimizing the total cost with all other constraints being the same. An empirical case study of a logistics network in Chongqing suggests that the proposed collaboration mechanism with SST network representation can reduce costs, improve transportation efficiency, and contribute to efficient and sustainable logistics network operations.
- Published
- 2020
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