Search

Prion protein is composed of a structure-unsolved N-terminal domain and a globular C-terminal domain. Under limited trypsin digestion, mouse recombinant prion protein can be cleaved into two parts at residue Lys105. Here, we termed these two fragments as the N-domain (sequence 23-105) and the C-domain (sequence 106-230). In this study, the structural properties of the N-domain, the C-domain, and the full-length protein were explored using small-angle X-ray scattering, analytical ultracentrifugation, circular dichroism spectroscopy, and the 8-anilino-1-naphthalenesulfonic acid binding assay. The conformation and size of the prion protein were found to change sensitively under the solvent conditions. The positive residues in the sequence 23-99 of the N-domain were found to be responsible for the enhanced flexibility with the salt concentration reduced below 5 mM. The C-domain containing a hydrophobic patch tends to unfold and aggregate during a salt-induced structural collapse. The N-domain collapsed together with the C-domain at pH 5.2, whereas it collapsed independently at pH 4.2. The positively charged cluster (sequence 100-105) in the N-domain contributed to protecting the exposed hydrophobic surface of the C-domain.

Structure and composition of the unilamellar vesicles (ULV) formed with catanionic surfactant of sodium dodecylsulfate (SDS) and cetyltrimethylammonium bromide (CTAB) are revealed using small-angle X-ray and neutron scattering (SAXS and SANS) and freeze-fracture-replication transmission electron microscopy (FFR-TEM). Imaging and scattering results consistently indicate a globular shape of the ULV, having a core size of 48 nm and a bilayer thickness of 32 A; the bilayer comprises a central aliphatic shell of 24 A, sandwiched by two headgroup shells, each of ca. 4 A thickness. From the zero-angle scattering intensity ratio of the SAXS and SANS data, a SDS/CTAB composition ratio of 3:4 for the ULV bilayer is deduced. Poly(oxyethylene-b-oxypropylene-b-oxyethylene) (P123), a triblock copolymer, is found to intervene into the ULV bilayer of the catanionic surfactant in solution, leading to successively enlarged complex ULV, as P123 concentration in the solution increases. The ULV of SDS/CTAB is saturated with P123-loading after a critical concertation of 0.067 mM P123; thereafter, formation and proliferation of constant-sized, P123-based core-shell micelles are observed with increase of P123 concentration. A structural model of P123-embedded ULV of the catanionic surfactant is proposed. These results suggest a capacity and limits of using the catanionic ULV as molecule carriers.

For undulator hard X-ray beamlines of a wide energy range, the beam intensity control is often needed to regulate the photon flux impinging on delicate detectors. Despite the capability of state-of-the-art X-ray pixel detectors being greatly advanced recently, the frontier undulator beamlines in synchrotron facilities often carry outstanding photon fluxes that are sometimes too high for certain measurements. Here, we report a developed protocol that allows intensity attenuation of an X-ray beam in the 4-23 keV energy range with flexible attenuation factors; a prototype is installed and tested on the 13A biological small-angle X-ray scattering beamline of the 3 GeV Taiwan Photon Source (TPS) of the National Synchrotron Radiation Research Center, Hsinchu, Taiwan. The intensity attenuation system is modified from a commercially available pneumatically actuated, vacuum-type precision X-ray attenuator of ADC ABS-300; the system provides beam attenuation factors covering 8 orders of intensity attenuation for an X-ray beam in 4-23 keV. This was achieved with selected combinations of 10 sets of metal foils comprising different thicknesses of Al, Ti, Cu, and Ta foils. A user-friendly protocol is established to automatically compare a subscribed attenuation factor with all the possible attenuation factors from the 1024 combinations of the 10 sets of foils in the X-ray energy used, and determine a set of the metal foils having a best-matched attenuation factor. Calculation of beam intensity attenuations with the selected foils is coded with Python and integrated into the Experimental Physics and Industrial Control System (EPICS). The input of an attenuation factor is done through a graphical display of the attenuator system based on the Control System Studio (CSS). The developed X-ray beam attenuation system provides a convenient and intuitive beam intensity control and has the potential to be adopted in future beamlines.

Protein tyrosine phosphatase: phospho-protein complex structure determination, which requires to understand how specificity is achieved at the protein level remains a significant challenge for protein crystallography and cryoEM due to the transient nature of binding interactions. Using rPTP{varepsilon}D1 and phospho-SrcKD as a model system, we established an integrative workflow involving protein crystallography, SAXS and pTyr-tailored MD simulations to reveal the complex formed between rPTP{varepsilon}D1 and phospho-SrcKD, revealing transient protein-protein interactions distal to the active site. To support our finding, we determined the associate rate between rPTP{varepsilon}D1 and phospho-SrcKD and showed that a single mutation on rPTP{varepsilon}D1 disrupts this transient interaction, resulting in the reduction of association rate and activity. Our simulations suggest that rPTP{varepsilon}D1 employs a binding mechanism involving conformational change prior to the engagement of cSrcKD. This integrative approach is applicable to other PTP: phospho-protein complex determination and is a general approach for elucidating transient protein surface interactions.

Hypothesis Multistage silicate self-organization into light-weight, high-strength, hierarchically patterned diatom frustules carries hints for innovative silica-based nanomaterials. With sodium silicate in a biomimetic sol-gel system templated by a tri-surfactant system of hexadecyltrimethylammonium bromide, sodium dodecylsulfate, and poly(oxyethylene-b-oxypropylene-b-oxyethylene) (P123), mesoporous silica nanochannel plates with perpendicular channel orientation are synthesized. The formation process, analogous to that of diatom frustules, is postulated to be directed by an oriented self-assembly of the block copolymer micelles shelled with charged catanionic surfactants upon silication. Experiments The postulated formation process for the oriented silica nanochannel plates was investigated using time-resolved small-angle X-ray and neutron scattering (SAXS/SANS) and freeze fracture replication transmission electron microscopy (FFR-TEM). Findings With fine-tuned molar ratios of the anionic, cationic, and nonionic surfactants, the catanionic combination and the nonionic copolymer form charged, prolate ternary micelles in aqueous solutions, which further develop into prototype monolayered micellar plates. The prolate shape and maximized surfactant adsorption of the complex micelles, revealed from combined SAXS/SANS analysis, are of critical importance in the subsequent micellar self-assembly upon silicate deposition. Time-resolved SAXS and FFR-TEM indicate that the silicate complex micelles coalesce laterally into the prototype micellar nanoplates, which further fuse with one another into large sheets of monolayered silicate micelles of in-plane lamellar packing. Upon silica polymerization, the in-plane lamellar packing of the micelles further transforms to 2D hexagonal packing of vertically oriented silicate channels. The unveiled structural features and their evolution not only elucidate the previously unresolved self-assembly process of through-thickness silica nanochannels but also open a new line of research mimicking free-standing frustules of diatoms.

Cadmium selenide is a II–VI semiconductor model system known for its nanoparticle preparation, growth mechanism, luminescence properties, and quantum confinement studies. For the past 2 decades, various thermodynamically stable “magic-size nanoclusters (MSCs)” of CdSe have been observed, isolated, and theoretically calculated. Nevertheless, none of the proposed structures were experimentally confirmed due to the small crystal domains beyond the diffraction limit. With a combination of nondestructive SAXS, WAXS, XRD, XPS, EXAFS, and MAS NMR techniques, we were able to verify the phase transformation, shape, size dimension, local bonding, and chemical environments of (CdSe)13 nanoclusters, which are indicative of a paired cluster model. These experimental results are consistent with the size, shape, bond lengths, dipole moment, and charge densities of the proposed “paired-tubular geometry” predicted by computational approaches. In this article, we revisit the formation pathway of the mysterious (CdSe)13 nan...

Direct binding of calcium ions (Ca2+) to phospholipid membranes is an unclarified yet critical signaling pathway in diverse Ca2+-regulated cellular phenomena. Here, high-pressure-liquid-chromatography, small-angle X-ray scattering (SAXS), UV–vis absorption, and differential refractive index detections are integrated to probe Ca2+-binding to the zwitterionic lipid membranes in nanodiscs. The responses of the membranes upon Ca2+-binding, in composition and conformation, are quantified through integrated data analysis. The results indicate that Ca2+ binds specifically into the phospholipid headgroup zone, resulting in membrane charging and membrane swelling, with a saturated Ca2+-lipid binding ratio of 1:8. A Ca2+-binding isotherm to the nanodisc is further established and yields an unexpectedly high binding constant K = 4260 M–1 and a leaflet potential of ca. 100 mV based on a modified Gouy–Chapman model. The calcium-lipid binding ratio, however, drops to 40% when the nanodisc undergoes a gel-to-fluid phase...

A combination of molecular dynamics (MD) simulations and X-ray scattering (SAXS) has emerged as the approach of choice for studying protein structures and dynamics in solution. This approach has potential applications for membrane proteins that neither are soluble nor form crystals easily. We explore the water-coupled dynamic structures of thromboxane synthase (TXAS) and prostacyclin synthase (PGIS) from scanning HPLC–SAXS measurements combined with MD ensemble analyses. Both proteins are heme-containing enzymes in the cytochrome P450 family, known as prostaglandin H2 (PGH2) isomerase, with counter-functions in regulation of platelet aggregation. Currently, the X-ray crystallographic structures of PGIS are available, but those for TXAS are not. The use of homology modeling of the TXAS structure with ns−μs explicit water solvation MD simulations allows much more accurate estimation of the configuration space with loop motion and origin of the protein behaviors in solution. In contrast to the stability of t...

The TPS 13A biological small-angle X-ray scattering (BioSAXS) beamline under construction is equipped with 4-m IU24 undulator for X-rays in the energy range of E = 4-23 keV (covering the K-edge absorptions from Ca to Ru). The beamline aims for cutting-edge researches in biomacromolecular structures and kinetics, in solid and solution, covering a wide length scale from atomic to micrometer scale and time resolution down to μs. To achieve the goals, the beamline integrates double-multilayer and double-crystal monochromators (DMM/DCM) to have an option of high flux of 4 × 1014 photons/s or a high energy resolution of ΔE/E = 1.5×10−4. The DCM together with a horizontal four-bounce crystal collimator (4BCC) will be implanted for low beam divergence to perform 2D ultra-SAXS (USAXS). To keep a common X-ray beam path of the operation modes, DMM and DCM are integrated into one rotating cradle in a same chamber for a common beam exit. Microbeam with reasonable beam divergence for SAXS/WAXS structural mapping will be realized with a virtual source defined by a set of high precision/stability slits and another set of K-B mirrors for a focus at the sample position with a demagnification close to 1.3:1. Two beam position monitors, with intensity and position feedbacks respectively to the virtual source slits and the 4BCC and a vertical deflection mirror, are used mainly to stabilize microbeam intensity and position within 1 μm in the vertical and horizontal directions. This TPS 13A BioSAXS beamline will be commissioning at the end of 2019.

Human infections of novel avian influenza A virus (H7N9) emerged in early 2013 and caused about 40% case-fatality through 2017. Therefore, development of influenza H7N9 vaccines is critical for pandemic preparedness. Currently, there are three means of production of commercial influenza vaccines: egg-based, mammalian cell-based, and insect cell-based platforms. The insect cell-based platform has the advantage of high speed in producing recombinant protein. In this study, we evaluate the stability and immunogenicity of two different influenza H7 HA expression constructs generated using the baculovirus system, including membrane-based full-length HA (mH7) and secreted ectodomain-based H7 (sH7). The mH7 construct could form an oligomer-rosette structure and had a high hemagglutinin (HA) titer 8192. In contrast to mH7, the sH7 construct could not form an oligomer-rosette structure and did not have HA titer before cross-linking with anti-His antibody. Thermal stability tests showed that the sH7 and mH7 constructs were unstable at 43 °C and 52 °C, respectively. In a mice immunization study, the mH7 construct but not the sH7 construct could induce robust HI and neutralizing antibody titers. In conclusion, further development of the mH7 vaccine candidate is desirable.

Uniform hollow silica nanospheres (HSNs) synthesized with reverse microemulsion have great application potential as nanoreactors because enzymes or nanocatalysts can be easily encapsulated de novo in synthesis. Water-in-oil (w/o) reverse microemulsions comprising the polymeric surfactant polyoxyethylene (5) isooctylphenyl ether (Igepal CA-520), ammonia and water in a continuous oil phase (alkanes) coalesce into size-tunable silica nanoparticles via diffusion aggregation after the introduction of silica precursors. Here, we elucidate in detail the growth mechanism for silica nanoparticles via nucleation of ammonium-catalyzed silica oligomers from tetraethylorthosilicate (TEOS) and nanoporous aminopropyltrimethoxy silane (APTS) in the reverse microemulsion system. The formation pathway was studied in situ with small-angle X-ray scattering (SAXS). We find a four-stage process showing a sigmoidal growth behavior in time with a crossover from the induction period, early nucleation stage, coalescence growth and a final slowing down of growth. Various characterizations (TEM, N2 isotherm, dynamic light scattering, zeta potential, NMR, elemental analysis) reveal the diameters, scattering length density (SLD), mesoporosity, surface potentials and chemical compositions of the HSNs. Oil phases of alkanes with different alkyl chains are systematically employed to tune the sizes of HSNs by varying oil molar volumes, co-solvent amounts or surfactant mixture ratios. Silica condensation is incomplete in the core region, with the silica source of TEOS and APTS leading to the hollow silica nanosphere after etching with warm water.

Galectins are a family of lectins that bind β-galactosides through their conserved carbohydrate recognition domain (CRD) and can induce aggregation with glycoproteins or glycolipids on the cell surface and thereby regulate cell activation, migration, adhesion, and signaling. Galectin-3 has an intrinsically disordered N-terminal domain and a canonical CRD. Unlike the other 14 known galectins in mammalian cells, which have dimeric or tandem-repeated CRDs enabling multivalency for various functions, galectin-3 is monomeric, and its functional multivalency therefore is somewhat of a mystery. Here, we used NMR spectroscopy, mutagenesis, small-angle X-ray scattering, and computational modeling to study the self-association–related multivalency of galectin-3 at the residue-specific level. We show that the disordered N-terminal domain (residues ∼20–100) interacts with itself and with a part of the CRD not involved in carbohydrate recognition (β-strands 7–9; residues ∼200–220), forming a fuzzy complex via inter- and intramolecular interactions, mainly through hydrophobicity. These fuzzy interactions are characteristic of intrinsically disordered proteins to achieve liquid–liquid phase separation, and we demonstrated that galectin-3 can also undergo liquid–liquid phase separation. We propose that galectin-3 may achieve multivalency through this multisite self-association mechanism facilitated by fuzzy interactions.

Upon apoptotic stress, Bcl-2 associated X (BAX) protein undergoes conformational changes and oligomerizes, leading to the mitochondrial membrane permeabilization and cell death. While structures of the resultant oligomer have been extensively studied, little is known about the intermediates that describe the reaction pathway from the inactive monomers to activated oligomers. Here we characterize the intermediate structures of BAX using combined small-angle X-ray scattering (SAXS) with on-line gel-filtration and electron spin resonance (ESR). The intermediates, including monomers, dimers, and tetramers, are reconstructed via integrating the SAXS-envelopes and ESR-determined skeleton structures. The hence revealed structures suggest a linear oligomerization of BAX utilizing the extended dimers with the two flexible α6 chains protruded out as ditopic ligands. The results of molecular dynamics simulation also support the ditopic dimer conformation with mobile α6. The ditopic dimers could further wind into a helical rod structure with three dimers in one helical turn. Our results not only reveal the on-pathway intermediates, but also suggest a ditopic oligomerization mechanism that may bridge the observed intermediate structures in solution to the large BAX assemblies lately observed on mitochondria.

Using simultaneously scanning small-angle X-ray scattering (SAXS) and UV–vis absorption with integrated online size exclusion chromatography, supplemental with molecular dynamics simulations, we unveil the long-postulated global structure evolution of a model multidomain protein bovine serum albumin (BSA) during acid-induced unfolding. Our results differentiate three global packing structures of the three molten globule domains of BSA, forming three intermediates I1, I2, and E along the unfolding pathway. The I1–I2 transition, overlooked in all previous studies, involves mainly coordinated reorientations across interconnected molten globule subdomains, and the transition activates a critical pivot domain opening of the protein for entering into the E form, with an unexpectedly large unfolding free energy change of −9.5 kcal mol–1, extracted based on the observed packing structural changes. The revealed local packing flexibility and rigidity of the molten globule domains in the E form elucidate how collect...

We report the first quantitative demonstration of the use of particle tracking microrheology (PTμR) in probing the pH-induced coil–globule transition (CGT) of poly-2-vinylpyridine (P2VP). The calculated radii R of the P2VP coils and globules are found to vary with molecular weight M respectively according to: R ∝ M 0.592 ± 0.006 and R ∝ M 0.339 ± 0.010 , in excellent agreement with the classical Flory–de Gennes theory. The sphere-like small-angle X-ray scattering spectrum and the sharp rise in pyrene emission suggest that the observed CGT is likely triggered by drastic changes in the chain's hydrophobicity, sensitive to the degree of protonation near the coil–globule transition point. A more in-depth theoretical analysis further reveals that the phenomenon strongly depends on interplays between excluded-volume, electrostatic, and hydrophobic interactions at the subunit level of a P2VP chain. This new application of PTμR could have potential uses in exploring the physics of a variety of polymer systems at the nano/molecular scales.

With a deformed object of a rigid rod inside, the local dislocations may be tracked relatively easily with respect to the internal rigid rod. We apply this concept on protein folding–unfolding to track the internal structural changes of an unfolded protein in solution. Proposed here is a protein internal coordination based on the major axis X of an ellipsoidal protein and the stable intrinsic transition dipole moment μ of the protein during unfolding. In this methodology, small-angle X-ray scattering (SAXS) is used to provide the protein global morphologies in the native and unfolded states. Furthermore, time-resolved fluorescence anisotropy (TRFA) provides the relative orientation between X and μ of Trp59 of the model protein cytochrome c. Hence observed in the protein unfolding with denaturants, acid, urea, or GuHCl, is the elongation of the native protein conformation along a reoriented protein major axis; accompanied are the different extents of relocations of the terminal α helices and loop structures of the protein in the corresponding unfolding.

SummaryProapoptotic BAX protein is largely cytosolic in healthy cells, but it oligomerizes and translocates to mitochondria upon receiving apoptotic stimuli. A long-standing challenge has been the inability to capture any structural information beyond the onset of activation. Here, we present solution structures of an activated BAX oligomer by means of spectroscopic and scattering methods, providing details about the monomer-monomer interfaces in the oligomer and how the oligomer is assembled from homodimers. We show that this soluble oligomer undergoes a direct conversion into membrane-inserted oligomer, which has the ability of inducing apoptosis and structurally resembles a membrane-embedded oligomer formed from BAX monomers in lipid environment. Structural differences between the soluble and the membrane-inserted oligomers are manifested in the C-terminal helices. Our data suggest an alternative pathway of apoptosis in which BAX oligomer formation occurs prior to membrane insertion.

A citrate-stabilizing Au nanoparticles aqueous solution was prepared at near 0 oC by reducing tetracholoaurate(III) ions with sodium borohydride. Combining with Pluronic block copolymers, the citrate-stabilizing Au nanoparticles was nearly completely embedded in the mesoporous silica channels via fast silicification with silicate solution at near neutral pH. After calcination for removing organic templates, Au nanoparticles@mesoporous silicas of high surface area and pore volume were obtained. With different block copolymer, the pore size of the mesoporous silica can be tuned. The Au nanoparticles@SBA-15 mesoporous silica exhibits high catalytic activity to CO oxidation reaction.

The microstructure of calcium–silicate–hydrate (C−S−H) gel, a major hydrated phase of Ordinary Portland Cement, with and without polycarboxylic ether (PCE) additives is investigated by combined analyses of small-angle X-ray scattering (SAXS) and small-angle neutron scattering (SANS) data. The results show that these comb-shaped polymers tend to increase the size of the disk-like globules but have little influence on the thickness of the water and calcium silicate layers within the globules. As a result, the fractal packing of the globules becomes more open in the range of a few hundred nanometers, in the sense that the mass fractal dimension diminishes, since the PCE adsorption on the globules increases the repulsive force between and polydispersity of the C−S−H units. Moreover, scanning electron microscope (SEM) study of the synthesized C−S−H gels in the micrometer range shows that the PCEs depress the formation of fibrils while enhancing the foil-like morphology.

Free-standing thin sheet form of mesoporous silica materials with perpendicular orientation is a much desired materials for its possible applications in catalysis, mask, and separation. A three component amphiphile system of sodium dodecyl sulfate/hexadecyltrimethylammonium bromide/pluronic-123(C16TMAB/SDS/P123) was employed to template the condensation of sodium silicates for the formation of SBA(⊥), a thin sheet of SBA-15 with perpendicular nanochannels. SBA(⊥) can be synthesized at SDS/C16TMAB = 1.5 and T ⩾ 40 °C and shows pH-dependent morphology. It has uniform pore size ∼9 nm, homogeneous sheet thickness in the range of 60–300 nm and dimension of several microns. We studied in details the structure and morphology of the SBA(⊥) with variation of three experimental parameters: the SDS/C16TMAB ratio, the temperature, and the pH condition in the synthetic gel. It is proposed that the mixed surfactants of SDS and C16TMAB form catanionic vesicle in which the P123 and silicates are condensed. The balanced interaction of P123/silicate with the narrow confinement under surfactant bi-layers of C16TMAB/SDS promoted the formation of perpendicular nanochannels. Low temperature and pH conditions favor stronger segregation of the PPO and PEO–oligosilicate segments in the SBA(⊥) structure which gives the basis of thickness control of the sheet. The control of structure and morphology are discussed with modern theory of microphase separation in block copolymers under confinement.

Free-standing mesoporous silica platelets in micron-scale consisting of perpendicular nanochannels were prepared with a ternary-surfactant composition of cationic, anionic and neutral block copolymer surfactants. The mesostructure of the mesoporous silica platelet(⊥) is templated by Pluronic 123 surfactant, and the platelet morphology is determined by the catanionic surfactant. The mesoporous silica platelet(⊥) was utilized as the nano-template to synthesize the mesoporous carbon platelet(⊥).

Hollow silica spheres with mesostructured shells (HSSMS) were prepared with a vesicle template of cetyltrimethylammonium bromide-sodium dodecyl sulfate-Pluronic P123 (C(16)TMAB-SDS-EO(20)PO(70)EO(20)) at a SDS/C(16)TMAB ratio of 0.6-0.8 following a fast silicification in dilute silicate solution at pH approximately 5.0. The mesostructure of the shell is disordered, and the mesopore size is about 5.5-7.5 nm. Moreover, the direction and length of the nanochannels of the shell change with the SDS/C(16)TMAB ratios. A bi-template model, in which the C(16)TMA(+)-DS(-) form the stable bilayer vesicle structure and the P123 copolymers anchored on C(16)TMA(+)-DS(-) vesicle act as the template for the mesoporous silica, was proposed to explain the formation of the HSSMS. This bi-template model can be applied extensively to prepare the HSSMS with different diameters and pore sizes by using other C(n)TMAX-SDS-EO(n)PO(m))EO(n) ternary-surfactant mixtures.

We have investigated bismuth ferrite nanoparticles (∼75 nm and ∼155 nm) synthesized by a chemical method, using soft X-ray (1253.6 eV) and hard X-ray (3500, 5500, and 7500 eV) photoelectron spectroscopy. This provided an evidence for the variation of chemical state of bismuth in crystalline, phase pure nanoparticles. X-ray photoelectron spectroscopy analysis using Mg Kα (1253.6 eV) source showed that iron and bismuth were present in both Fe3+ and Bi3+ valence states as expected for bismuth ferrite. However, hard X-ray photoelectron spectroscopy analysis of the bismuth ferrite nanoparticles using variable photon energies unexpectedly showed the presence of Bi0 valence state below the surface region, indicating that bismuth ferrite nanoparticles are chemically inhomogeneous in the radial direction. Consistently, small-angle X-ray scattering reveals a core-shell structure for these radial inhomogeneous nanoparticles.

A synchrotron X-ray diffraction method was used to measure the average density of water (H2O) confined in mesoporous silica materials MCM-41-S-15 and MCM-41-S-24. The average density versus temperature at atmospheric pressure of deeply cooled water is obtained by monitoring the intensity change of the MCM-41-S Bragg peaks, which is directly related to the scattering length density contrast between the silica matrix and the confined water. Within MCM-41-S-15, the pore size is small enough to prevent the crystallization at least down to 130 K. Besides the well-known density maximum at 277 K, a density minimum is observed at 200 K for the confined water, below which a regular thermal expansion behavior is restored. Within MCM-41-S-24 of larger pore size, water freezes at 220.5 K. The average water/ice density measurement in MCM-41-S-24 validated the diffraction method. The anomalous thermal expansion coefficient (αp) is calculated. The temperature at which the αp reaches maximum is found to be pore size independent, but the peak height of the αp maximum is linearly dependent on the pore size. The obtained data are critical to verify available theoretical and computational models of water.