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Climate extremes and anomalies modify the CO2 ecosystem–atmosphere exchange of the boreal forests and consequently alter the terrestrial carbon stocks and the atmospheric greenhouse gas concentrations. The effects of the anomalous weather conditions on the CO2 net ecosystem exchange (NEE), total ecosystem respiration (TER), and gross primary production (GPP) of the typical southern taiga nemorose spruce forest were analyzed using continuous eddy covariance flux measurements in the 2015–2020 period. The forest was found to be a source of atmospheric CO2 in 2016, 2017, 2019, and 2020 (the mean annual GPP/TER ratio was between 0.87 and 0.97). In 2018, the forest was found to act as a CO2 sink (GPP/TER = 1.47) when a positive temperature anomaly in the growing season was accompanied by a negative precipitation anomaly and increased global radiation. The early start of the CO2 uptake in the anomalously warm winter of 2019/2020 did not result in an increase in the annual GPP/TER ratio (0.90). The comparison of the flux data obtained from the nemorose spruce forest on the well-drained soils with the data obtained from paludified spruce forest in the same landscape showed that the mean annual GPP/TER ratio of the sites alternatively responded to the mentioned anomalies. This study suggests that a variety of soil moisture regimes across the southern taiga spruce forests provide a non-uniformity in the response reactions of the CO2 ecosystem–atmosphere exchange on the climate anomalies. [ABSTRACT FROM AUTHOR]