217 results on '"Yarmolinsky, James"'
Search Results
2. Association of inflammatory cytokines with lung function, chronic lung diseases, and COVID-19
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Rontogianni, Marina O., Gill, Dipender, Bouras, Emmanouil, Asimakopoulos, Alexandros-Georgios, Tzoulaki, Ioanna, Karhunen, Ville, Lehtimäki, Terho, Raitakari, Olli, Wielscher, Matthias, Salomaa, Veikko, Jalkanen, Sirpa, Salmi, Marko, Timonen, Markku, Yarmolinsky, James, Chen, Jing, Tobin, Martin D., Izquierdo, Abril G., Herzig, Karl-Heinz, Ioannides, Anne E., Jarvelin, Marjo-Riitta, Dehghan, Abbas, and Tsilidis, Konstantinos K.
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- 2024
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3. Circulating inflammatory and immune response proteins and endometrial cancer risk: a nested case-control study and Mendelian randomization analyses
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Wang, Sabrina E., Viallon, Vivian, Lee, Matthew, Dimou, Niki, Hamilton, Fergus, Biessy, Carine, O'Mara, Tracy, Kyrgiou, Maria, Crosbie, Emma J., Truong, Therese, Severi, Gianluca, Kaaks, Rudolf, Fortner, Renée Turzanski, Schulze, Matthias B., Bendinelli, Benedetta, Sabina, Sieri, Tumino, Rosario, Sacerdote, Carlotta, Panico, Salvatore, Crous-Bou, Marta, Sánchez, Maria-Jose, Aizpurua, Amaia, Palacios, Daniel Rodriguez, Guevara, Marcela, Travis, Ruth C., Tsilidis, Konstantinos K., Heath, Alicia, Yarmolinsky, James, Rinaldi, Sabina, Gunter, Marc J., and Dossus, Laure
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- 2024
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4. The effect of SGLT2 inhibition on prostate cancer: Mendelian randomization and observational analysis using electronic healthcare and cohort data
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Zheng, Jie, Lu, Jieli, Qi, Jiying, Yang, Qian, Zhao, Huiling, Liu, Haoyu, Chen, Zhihe, Huang, Lanhui, Ye, Youqiong, Xu, Min, Xu, Yu, Wang, Tiange, Li, Mian, Zhao, Zhiyun, Zheng, Ruizhi, Wang, Shuangyuan, Lin, Hong, Hu, Chunyan, Ling Chui, Celine Sze, Au Yeung, Shiu Lun, Luo, Shan, Dimopoulou, Olympia, Dixon, Padraig, Harrison, Sean, Liu, Yi, Robinson, Jamie, Yarmolinsky, James, Haycock, Philip, Yuan, Jinqiu, Lewis, Sarah, Yuan, Zhongshang, Gaunt, Tom R., Smith, George Davey, Ning, Guang, Martin, Richard M., Cui, Bin, Wang, Weiqing, and Bi, Yufang
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- 2024
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5. Genetically proxied glucose-lowering drug target perturbation and risk of cancer: a Mendelian randomisation analysis
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Yarmolinsky, James, Bouras, Emmanouil, Constantinescu, Andrei, Burrows, Kimberley, Bull, Caroline J., Vincent, Emma E., Martin, Richard M., Dimopoulou, Olympia, Lewis, Sarah J., Moreno, Victor, Vujkovic, Marijana, Chang, Kyong-Mi, Voight, Benjamin F., Tsao, Philip S., Gunter, Marc J., Hampe, Jochen, Pellatt, Andrew J., Pharoah, Paul D. P., Schoen, Robert E., Gallinger, Steven, Jenkins, Mark A., Pai, Rish K., Gill, Dipender, and Tsilidis, Kostas K.
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- 2023
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6. Association between circulating inflammatory markers and adult cancer risk: a Mendelian randomization analysis
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Landi, Maria Teresa, Stevens, Victoria, Wang, Ying, Albanes, Demetrios, Caporaso, Neil, Brennan, Paul, Amos, Christopher I., Shete, Sanjay, Hung, Rayjean J., Bickeböller, Heike, Risch, Angela, Houlston, Richard, Lam, Stephen, Tardon, Adonina, Chen, Chu, Bojesen, Stig E., Johansson, Mattias, Wichmann, H-Erich, Christiani, David, Rennert, Gadi, Arnold, Susanne, Field, John K., Le Marchand, Loic, Melander, Olle, Brunnström, Hans, Liu, Geoffrey, Andrew, Angeline, Kiemeney, Lambertus A., Shen, Hongbing, Zienolddiny, Shan, Grankvist, Kjell, Johansson, Mikael, Teare, M. Dawn, Hong, Yun-Chul, Yuan, Jian-Min, Lazarus, Philip, Schabath, Matthew B., Aldrich, Melinda C., Eeles, Rosalind A., Haiman, Christopher A., Kote-Jarai, Zsofia, Schumacher, Fredrick R., Benlloch, Sara, Al Olama, Ali Amin, Muir, Kenneth R., Berndt, Sonja I., Conti, David V., Wiklund, Fredrik, Chanock, Stephen, Tangen, Catherine M., Batra, Jyotsna, Clements, Judith A., Grönberg, Henrik, Pashayan, Nora, Schleutker, Johanna, Albanes, Demetrius, Weinstein, Stephanie J., Wolk, Alicja, West, Catharine M.L., Mucci, Lorelei A., Cancel-Tassin, Géraldine, Koutros, Stella, Sørensen, Karina Dalsgaard, Grindedal, Eli Marie, Neal, David E., Hamdy, Freddie C., Donovan, Jenny L., Travis, Ruth C., Hamilton, Robert J., Ingles, Sue Ann, Rosenstein, Barry S., Lu, Yong-Jie, Giles, Graham G., MacInnis, Robert J., Kibel, Adam S., Vega, Ana, Kogevinas, Manolis, Penney, Kathryn L., Park, Jong Y., Stanfrod, Janet L., Cybulski, Cezary, Nordestgaard, Børge G., Nielsen, Sune F., Brenner, Hermann, Maier, Christiane, Logothetis, Christopher J., John, Esther M., Teixeira, Manuel R., Neuhausen, Susan L., De Ruyck, Kim, Razack, Azad, Newcomb, Lisa F., Lessel, Davor, Kaneva, Radka, Usmani, Nawaid, Claessens, Frank, Townsend, Paul A., Castelao, Jose Esteban, Roobol, Monique J., Menegaux, Florence, Khaw, Kay-Tee, Cannon-Albright, Lisa, Pandha, Hardev, Thibodeau, Stephen N., Hunter, David J., Kraft, Peter, Blot, William J., Riboli, Elio, Yarmolinsky, James, Robinson, Jamie W., Mariosa, Daniela, Karhunen, Ville, Huang, Jian, Dimou, Niki, Murphy, Neil, Burrows, Kimberley, Bouras, Emmanouil, Smith-Byrne, Karl, Lewis, Sarah J., Galesloot, Tessel E., Vermeulen, Sita, Martin, Paul, Hou, Lifang, Newcomb, Polly A., White, Emily, Wu, Anna H., Le Marchand, Loïc, Phipps, Amanda I., Buchanan, Daniel D., Zhao, Sizheng Steven, Gill, Dipender, Chanock, Stephen J., Purdue, Mark P., Davey Smith, George, Herzig, Karl-Heinz, Järvelin, Marjo-Riitta, Amos, Chris I., Dehghan, Abbas, Gunter, Marc J., Tsilidis, Kostas K., and Martin, Richard M.
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- 2024
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7. Impact of weight loss on cancer-related proteins in serum: results from a cluster randomised controlled trial of individuals with type 2 diabetes
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Bull, Caroline J., Hazelwood, Emma, Legge, Danny N., Corbin, Laura J., Richardson, Tom G., Lee, Matthew, Yarmolinsky, James, Smith-Byrne, Karl, Hughes, David A., Johansson, Mattias, Peters, Ulrike, Berndt, Sonja I., Brenner, Hermann, Burnett-Hartman, Andrea, Cheng, Iona, Kweon, Sun-Seog, Le Marchand, Loic, Li, Li, Newcomb, Polly A., Pearlman, Rachel, McConnachie, Alex, Welsh, Paul, Taylor, Roy, Lean, Mike E.J., Sattar, Naveed, Murphy, Neil, Gunter, Marc J., Timpson, Nicholas J., and Vincent, Emma E.
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- 2024
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8. Genetically proxied impaired GIPR signaling and risk of 6 cancers
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Rogers, Miranda, Gill, Dipender, Ahlqvist, Emma, Robinson, Tim, Mariosa, Daniela, Johansson, Mattias, Cortez Cardoso Penha, Ricardo, Dossus, Laure, Gunter, Marc J., Moreno, Victor, Davey Smith, George, Martin, Richard M., and Yarmolinsky, James
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- 2023
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9. Abstract 12098: Evaluation of Inflammatory Biomarkers and Causal Association With Abdominal Aortic Aneurysm Development
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Sharma, Pranav, Yarmolinsky, James, Karhunen, Ville, Gill, Dipender, Roychowdhury, Tanmoy, Levin, Michael, and Damrauer, Scott M
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- 2023
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10. Applying Mendelian randomization to appraise causality in relationships between nutrition and cancer
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Wade, Kaitlin H., Yarmolinsky, James, Giovannucci, Edward, Lewis, Sarah J., Millwood, Iona Y., Munafò, Marcus R., Meddens, Fleur, Burrows, Kimberley, Bell, Joshua A., Davies, Neil M., Mariosa, Daniela, Kanerva, Noora, Vincent, Emma E., Smith-Byrne, Karl, Guida, Florence, Gunter, Marc J., Sanderson, Eleanor, Dudbridge, Frank, Burgess, Stephen, Cornelis, Marilyn C., Richardson, Tom G., Borges, Maria Carolina, Bowden, Jack, Hemani, Gibran, Cho, Yoonsu, Spiller, Wes, Richmond, Rebecca C., Carter, Alice R., Langdon, Ryan, Lawlor, Deborah A., Walters, Robin G., Vimaleswaran, Karani Santhanakrishnan, Anderson, Annie, Sandu, Meda R., Tilling, Kate, Davey Smith, George, Martin, Richard M., and Relton, Caroline L.
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- 2022
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11. Circulating inflammatory cytokines and risk of five cancers: a Mendelian randomization analysis
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Bouras, Emmanouil, Karhunen, Ville, Gill, Dipender, Huang, Jian, Haycock, Philip C., Gunter, Marc J., Johansson, Mattias, Brennan, Paul, Key, Tim, Lewis, Sarah J., Martin, Richard M., Murphy, Neil, Platz, Elizabeth A., Travis, Ruth, Yarmolinsky, James, Zuber, Verena, Martin, Paul, Katsoulis, Michail, Freisling, Heinz, Nøst, Therese Haugdahl, Schulze, Matthias B., Dossus, Laure, Hung, Rayjean J., Amos, Christopher I., Ahola-Olli, Ari, Palaniswamy, Saranya, Männikkö, Minna, Auvinen, Juha, Herzig, Karl-Heinz, Keinänen-Kiukaanniemi, Sirkka, Lehtimäki, Terho, Salomaa, Veikko, Raitakari, Olli, Salmi, Marko, Jalkanen, Sirpa, Jarvelin, Marjo-Riitta, Dehghan, Abbas, and Tsilidis, Konstantinos K.
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- 2022
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12. Identifying molecular mediators of the relationship between body mass index and endometrial cancer risk: a Mendelian randomization analysis
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Hazelwood, Emma, Sanderson, Eleanor, Tan, Vanessa Y., Ruth, Katherine S., Frayling, Timothy M., Dimou, Niki, Gunter, Marc J., Dossus, Laure, Newton, Claire, Ryan, Neil, Pournaras, Dimitri J., O’Mara, Tracy A., Davey Smith, George, Martin, Richard M., and Yarmolinsky, James
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- 2022
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13. Identification of potential mediators of the relationship between body mass index and colorectal cancer: a Mendelian randomization analysis
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Bouras, Emmanouil, primary, Gill, Dipender, additional, Zuber, Verena, additional, Murphy, Neil, additional, Dimou, Niki, additional, Aleksandrova, Krasimira, additional, Lewis, Sarah J, additional, Martin, Richard M, additional, Yarmolinsky, James, additional, Albanes, Demetrius, additional, Brenner, Hermann, additional, Castellví-Bel, Sergi, additional, Chan, Andrew T, additional, Cheng, Iona, additional, Gruber, Stephen, additional, Van Guelpen, Bethany, additional, Li, Christopher I, additional, Le Marchand, Loic, additional, Newcomb, Polly A, additional, Ogino, Shuji, additional, Pellatt, Andrew, additional, Schmit, Stephanie L, additional, Wolk, Alicja, additional, Wu, Anna H, additional, Peters, Ulrike, additional, Gunter, Marc J, additional, and Tsilidis, Konstantinos K, additional
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- 2024
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14. Identification of potential mediators of the relationship between body mass index and colorectal cancer : a Mendelian randomization analysis
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Bouras, Emmanouil, Gill, Dipender, Zuber, Verena, Murphy, Neil, Dimou, Niki, Aleksandrova, Krasimira, Lewis, Sarah J., Martin, Richard M., Yarmolinsky, James, Albanes, Demetrius, Brenner, Hermann, Castellví-Bel, Sergi, Chan, Andrew T., Cheng, Iona, Gruber, Stephen, van Guelpen, Bethany, Li, Christopher I., Le Marchand, Loic, Newcomb, Polly A., Ogino, Shuji, Pellatt, Andrew, Schmit, Stephanie L., Wolk, Alicja, Wu, Anna H., Peters, Ulrike, Gunter, Marc J., Tsilidis, Konstantinos K., Bouras, Emmanouil, Gill, Dipender, Zuber, Verena, Murphy, Neil, Dimou, Niki, Aleksandrova, Krasimira, Lewis, Sarah J., Martin, Richard M., Yarmolinsky, James, Albanes, Demetrius, Brenner, Hermann, Castellví-Bel, Sergi, Chan, Andrew T., Cheng, Iona, Gruber, Stephen, van Guelpen, Bethany, Li, Christopher I., Le Marchand, Loic, Newcomb, Polly A., Ogino, Shuji, Pellatt, Andrew, Schmit, Stephanie L., Wolk, Alicja, Wu, Anna H., Peters, Ulrike, Gunter, Marc J., and Tsilidis, Konstantinos K.
- Abstract
Background: Colorectal cancer (CRC) is the third-most-common cancer worldwide and its rates are increasing. Elevated body mass index (BMI) is an established risk factor for CRC, although the molecular mechanisms behind this association remain unclear. Using the Mendelian randomization (MR) framework, we aimed to investigate the mediating effects of putative biomarkers and other CRC risk factors in the association between BMI and CRC. Methods: We selected as mediators biomarkers of established cancer-related mechanisms and other CRC risk factors for which a plausible association with obesity exists, such as inflammatory biomarkers, glucose homeostasis traits, lipids, adipokines, insulin-like growth factor 1 (IGF1), sex hormones, 25-hydroxy-vitamin D, smoking, physical activity (PA) and alcohol consumption. We used inverse-variance weighted MR in the main univariable analyses and performed sensitivity analyses (weighted-median, MR–Egger, Contamination Mixture). We used multivariable MR for the mediation analyses. Results: Genetically predicted BMI was positively associated with CRC risk [odds ratio per SD (5 kg/m2) ¼ 1.17, 95% CI: 1.08–1.24, P-value ¼ 1.4 × 10−5] and robustly associated with nearly all potential mediators. Genetically predicted IGF1, fasting insulin, low-density lipoprotein cholesterol, smoking, PA and alcohol were associated with CRC risk. Evidence for attenuation was found for IGF1 [explained 7% (95% CI: 2–13%) of the association], smoking (31%, 4–57%) and PA (7%, 2–11%). There was little evidence for pleiotropy, although smoking was bidirectionally associated with BMI and instruments were weak for PA. Conclusions: The effect of BMI on CRC risk is possibly partly mediated through plasma IGF1, whereas the attenuation of the BMI–CRC association by smoking and PA may reflect confounding and shared underlying mechanisms rather than mediation.
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- 2024
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15. A drug target for erectile dysfunction to help improve fertility, sexual activity, and wellbeing:mendelian randomisation study
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Woolf, Benjamin, Rajasundaram, Skanda, Cronjé, Héléne T., Yarmolinsky, James, Burgess, Stephen, Gill, Dipender, Woolf, Benjamin, Rajasundaram, Skanda, Cronjé, Héléne T., Yarmolinsky, James, Burgess, Stephen, and Gill, Dipender
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Objective To investigate the association of genetically proxied (using a surrogate biomarker) inhibition of phosphodiesterase 5 (PDE5), an established drug target for erectile dysfunction, with fertility, sexual behaviour, and subjective wellbeing. Design Two sample cis-mendelian randomisation study. Setting Summary data on genetic associations obtained from the International Consortium for Blood Pressure and UK Biobank. Participants Individuals of European ancestry from the International Consortium for Blood Pressure (n=757 601) for estimating PDE5 inhibition (using the surrogate biomarker of diastolic blood pressure reduction), and UK Biobank (n=211 840) for estimating the fertility, sexual behaviour, and subjective wellbeing outcomes in male participants. Intervention Genetically proxied PDE5 inhibition. Main outcome measures Number of children fathered, number of sexual partners, probability of never having had sexual intercourse, and subjective wellbeing. Results Genetically proxied PDE5 inhibition was associated with male participants having 0.28 (95% confidence interval 0.16 to 0.39) more children (false discovery rate corrected P<0.001). This association was not identified in female participants. No evidence was found of an association between genetically proxied PDE5 inhibition and number of sexual partners, probability of never having had sexual intercourse, or self-reported wellbeing in male participants. Conclusions The findings of this study provide genetic support for PDE5 inhibition potentially increasing the number of children fathered by male individuals. Absence of this association in female participants supports increased propensity for sustained and robust penile erections as a potential underlying mechanism. Further studies are required to confirm this, however, and these findings should not promote indiscriminate use of PDE5 inhibitors, which can also have harmful adverse effects, Objective: To investigate the association of genetically proxied (using a surrogate biomarker) inhibition of phosphodiesterase 5 (PDE5), an established drug target for erectile dysfunction, with fertility, sexual behaviour, and subjective wellbeing. Design: Two sample cis-mendelian randomisation study. Setting: Summary data on genetic associations obtained from the International Consortium for Blood Pressure and UK Biobank. Participants: Individuals of European ancestry from the International Consortium for Blood Pressure (n=757 601) for estimating PDE5 inhibition (using the surrogate biomarker of diastolic blood pressure reduction), and UK Biobank (n=211 840) for estimating the fertility, sexual behaviour, and subjective wellbeing outcomes in male participants. Intervention: Genetically proxied PDE5 inhibition. Main outcome measures: Number of children fathered, number of sexual partners, probability of never having had sexual intercourse, and subjective wellbeing. Results: Genetically proxied PDE5 inhibition was associated with male participants having 0.28 (95% confidence interval 0.16 to 0.39) more children (false discovery rate corrected P<0.001). This association was not identified in female participants. No evidence was found of an association between genetically proxied PDE5 inhibition and number of sexual partners, probability of never having had sexual intercourse, or self-reported wellbeing in male participants. Conclusions: The findings of this study provide genetic support for PDE5 inhibition potentially increasing the number of children fathered by male individuals. Absence of this association in female participants supports increased propensity for sustained and robust penile erections as a potential underlying mechanism. Further studies are required to confirm this, however, and these findings should not promote indiscriminate use of PDE5 inhibitors, which can also have harmful adverse effects.
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- 2024
16. Association between genetically proxied PCSK9 inhibition and prostate cancer risk: A Mendelian randomisation study
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Fang, Si, Yarmolinsky, James, Gill, Dipender, Bull, Caroline J., Perks, Claire M., Davey Smith, George, Gaunt, Tom R., and Richardson, Tom G.
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Prostate cancer -- Genetic aspects -- Risk factors -- Care and treatment ,Drug targeting -- Analysis ,Biological sciences - Abstract
Background Prostate cancer (PrCa) is the second most prevalent malignancy in men worldwide. Observational studies have linked the use of low-density lipoprotein cholesterol (LDL-c) lowering therapies with reduced risk of PrCa, which may potentially be attributable to confounding factors. In this study, we performed a drug target Mendelian randomisation (MR) analysis to evaluate the association of genetically proxied inhibition of LDL-c-lowering drug targets on risk of PrCa. Methods and findings Single-nucleotide polymorphisms (SNPs) associated with LDL-c (P < 5 x 10.sup.-8) from the Global Lipids Genetics Consortium genome-wide association study (GWAS) (N = 1,320,016) and located in and around the HMGCR, NPC1L1, and PCSK9 genes were used to proxy the therapeutic inhibition of these targets. Summary-level data regarding the risk of total, advanced, and early-onset PrCa were obtained from the PRACTICAL consortium. Validation analyses were performed using genetic instruments from an LDL-c GWAS conducted on male UK Biobank participants of European ancestry (N = 201,678), as well as instruments selected based on liver-derived gene expression and circulation plasma levels of targets. We also investigated whether putative mediators may play a role in findings for traits previously implicated in PrCa risk (i.e., lipoprotein a (Lp(a)), body mass index (BMI), and testosterone). Applying two-sample MR using the inverse-variance weighted approach provided strong evidence supporting an effect of genetically proxied inhibition of PCSK9 (equivalent to a standard deviation (SD) reduction in LDL-c) on lower risk of total PrCa (odds ratio (OR) = 0.85, 95% confidence interval (CI) = 0.76 to 0.96, P = 9.15 x 10.sup.-3) and early-onset PrCa (OR = 0.70, 95% CI = 0.52 to 0.95, P = 0.023). Genetically proxied HMGCR inhibition provided a similar central effect estimate on PrCa risk, although with a wider 95% CI (OR = 0.83, 95% CI = 0.62 to 1.13, P = 0.244), whereas genetically proxied NPC1L1 inhibition had an effect on higher PrCa risk with a 95% CI that likewise included the null (OR = 1.34, 95% CI = 0.87 to 2.04, P = 0.180). Analyses using male-stratified instruments provided consistent results. Secondary MR analyses supported a genetically proxied effect of liver-specific PCSK9 expression (OR = 0.90 per SD reduction in PCSK9 expression, 95% CI = 0.86 to 0.95, P = 5.50 x 10.sup.-5) and circulating plasma levels of PCSK9 (OR = 0.93 per SD reduction in PCSK9 protein levels, 95% CI = 0.87 to 0.997, P = 0.04) on PrCa risk. Colocalization analyses identified strong evidence (posterior probability (PPA) = 81.3%) of a shared genetic variant (rs553741) between liver-derived PCSK9 expression and PrCa risk, whereas weak evidence was found for HMGCR (PPA = 0.33%) and NPC1L1 expression (PPA = 0.38%). Moreover, genetically proxied PCSK9 inhibition was strongly associated with Lp(a) levels (Beta = -0.08, 95% CI = -0.12 to -0.05, P = 1.00 x 10.sup.-5 ), but not BMI or testosterone, indicating a possible role for Lp(a) in the biological mechanism underlying the association between PCSK9 and PrCa. Notably, we emphasise that our estimates are based on a lifelong exposure that makes direct comparisons with trial results challenging. Conclusions Our study supports a strong association between genetically proxied inhibition of PCSK9 and a lower risk of total and early-onset PrCa, potentially through an alternative mechanism other than the on-target effect on LDL-c. Further evidence from clinical studies is needed to confirm this finding as well as the putative mediatory role of Lp(a)., Author(s): Si Fang 1,2,*, James Yarmolinsky 1,2, Dipender Gill 3,4, Caroline J. Bull 1,2,5,6, Claire M. Perks 6, the PRACTICAL Consortium, George Davey Smith 1,2, Tom R. Gaunt 1,2, Tom [...]
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- 2023
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17. Mendelian Randomization and Bayesian Colocalization Analysis Implicate Glycoprotein VI as a Potential Drug Target for Cardioembolic Stroke in South Asian Populations.
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Siwei Wu, Meena, Devendra, Yarmolinsky, James, Gill, Dipender, Smith, Alexander, Dib, Marie-Joe, Chauhan, Ganesh, Rohatgi, Anand, Dehghan, Abbas, and Tzoulaki, Ioanna
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- 2024
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18. RE: Exploring the cross-cancer effect of circulating proteins and discovering potential intervention targets for 13 site-specific cancers
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Yarmolinsky, James, primary, Tzoulaki, Ioanna, additional, Gunter, Marc J, additional, Travis, Ruth C, additional, Davey Smith, George, additional, and Smith-Byrne, Karl, additional
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- 2024
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19. Novel genetic loci, lifestyle factors, and inflammatory markers identified as risk factors for sarcoidosis
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Yuan, Shuai, primary, Chen, Jie, additional, Zhao, Sizheng Steven, additional, Yarmolinsky, James, additional, Arkema, Elizabeth, additional, Tsilidis, Konstantinos, additional, Burgess, Stephen, additional, and Larsson, Susanna, additional
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- 2024
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20. Investigating the association between genetically proxied circulating levels of immune checkpoint proteins and cancer survival: protocol for a Mendelian randomisation analysis
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Bate, Tessa, primary, Martin, Richard M, additional, Yarmolinsky, James, additional, and Haycock, Philip C, additional
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- 2024
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21. Association between circulating inflammatory markers and adult cancer risk: a Mendelian randomization analysis
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Yarmolinsky, James, primary, Robinson, Jamie W., additional, Mariosa, Daniela, additional, Karhunen, Ville, additional, Huang, Jian, additional, Dimou, Niki, additional, Murphy, Neil, additional, Burrows, Kimberley, additional, Bouras, Emmanouil, additional, Smith-Byrne, Karl, additional, Lewis, Sarah J., additional, Galesloot, Tessel E., additional, Kiemeney, Lambertus A., additional, Vermeulen, Sita, additional, Martin, Paul, additional, Albanes, Demetrius, additional, Hou, Lifang, additional, Newcomb, Polly A., additional, White, Emily, additional, Wolk, Alicja, additional, Wu, Anna H., additional, Le Marchand, Loïc, additional, Phipps, Amanda I., additional, Buchanan, Daniel D., additional, Zhao, Sizheng Steven, additional, Gill, Dipender, additional, Chanock, Stephen J., additional, Purdue, Mark P., additional, Davey Smith, George, additional, Brennan, Paul, additional, Herzig, Karl-Heinz, additional, Järvelin, Marjo-Riitta, additional, Amos, Chris I., additional, Hung, Rayjean J., additional, Dehghan, Abbas, additional, Johansson, Mattias, additional, Gunter, Marc J., additional, Tsilidis, Kostas K., additional, Martin, Richard M., additional, Landi, Maria Teresa, additional, Stevens, Victoria, additional, Wang, Ying, additional, Albanes, Demetrios, additional, Caporaso, Neil, additional, Amos, Christopher I., additional, Shete, Sanjay, additional, Bickeböller, Heike, additional, Risch, Angela, additional, Houlston, Richard, additional, Lam, Stephen, additional, Tardon, Adonina, additional, Chen, Chu, additional, Bojesen, Stig E., additional, Wichmann, H-Erich, additional, Christiani, David, additional, Rennert, Gadi, additional, Arnold, Susanne, additional, Field, John K., additional, Le Marchand, Loic, additional, Melander, Olle, additional, Brunnström, Hans, additional, Liu, Geoffrey, additional, Andrew, Angeline, additional, Shen, Hongbing, additional, Zienolddiny, Shan, additional, Grankvist, Kjell, additional, Johansson, Mikael, additional, Teare, M. Dawn, additional, Hong, Yun-Chul, additional, Yuan, Jian-Min, additional, Lazarus, Philip, additional, Schabath, Matthew B., additional, Aldrich, Melinda C., additional, Eeles, Rosalind A., additional, Haiman, Christopher A., additional, Kote-Jarai, Zsofia, additional, Schumacher, Fredrick R., additional, Benlloch, Sara, additional, Al Olama, Ali Amin, additional, Muir, Kenneth R., additional, Berndt, Sonja I., additional, Conti, David V., additional, Wiklund, Fredrik, additional, Chanock, Stephen, additional, Tangen, Catherine M., additional, Batra, Jyotsna, additional, Clements, Judith A., additional, Grönberg, Henrik, additional, Pashayan, Nora, additional, Schleutker, Johanna, additional, Weinstein, Stephanie J., additional, West, Catharine M.L., additional, Mucci, Lorelei A., additional, Cancel-Tassin, Géraldine, additional, Koutros, Stella, additional, Sørensen, Karina Dalsgaard, additional, Grindedal, Eli Marie, additional, Neal, David E., additional, Hamdy, Freddie C., additional, Donovan, Jenny L., additional, Travis, Ruth C., additional, Hamilton, Robert J., additional, Ingles, Sue Ann, additional, Rosenstein, Barry S., additional, Lu, Yong-Jie, additional, Giles, Graham G., additional, MacInnis, Robert J., additional, Kibel, Adam S., additional, Vega, Ana, additional, Kogevinas, Manolis, additional, Penney, Kathryn L., additional, Park, Jong Y., additional, Stanfrod, Janet L., additional, Cybulski, Cezary, additional, Nordestgaard, Børge G., additional, Nielsen, Sune F., additional, Brenner, Hermann, additional, Maier, Christiane, additional, Logothetis, Christopher J., additional, John, Esther M., additional, Teixeira, Manuel R., additional, Neuhausen, Susan L., additional, De Ruyck, Kim, additional, Razack, Azad, additional, Newcomb, Lisa F., additional, Lessel, Davor, additional, Kaneva, Radka, additional, Usmani, Nawaid, additional, Claessens, Frank, additional, Townsend, Paul A., additional, Castelao, Jose Esteban, additional, Roobol, Monique J., additional, Menegaux, Florence, additional, Khaw, Kay-Tee, additional, Cannon-Albright, Lisa, additional, Pandha, Hardev, additional, Thibodeau, Stephen N., additional, Hunter, David J., additional, Kraft, Peter, additional, Blot, William J., additional, and Riboli, Elio, additional
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- 2024
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22. Phenome-wide Mendelian randomization mapping the influence of the plasma proteome on complex diseases
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Zheng, Jie, Haberland, Valeriia, Baird, Denis, Walker, Venexia, Haycock, Philip C., Hurle, Mark R., Gutteridge, Alex, Erola, Pau, Liu, Yi, Luo, Shan, Robinson, Jamie, Richardson, Tom G., Staley, James R., Elsworth, Benjamin, Burgess, Stephen, Sun, Benjamin B., Danesh, John, Runz, Heiko, Maranville, Joseph C., Martin, Hannah M., Yarmolinsky, James, Laurin, Charles, Holmes, Michael V., Liu, Jimmy Z., Estrada, Karol, Santos, Rita, McCarthy, Linda, Waterworth, Dawn, Nelson, Matthew R., Smith, George Davey, Butterworth, Adam S., Hemani, Gibran, Scott, Robert A., and Gaunt, Tom R.
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- 2020
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23. A drug target for erectile dysfunction to help improve fertility, sexual activity, and wellbeing: mendelian randomisation study
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Woolf, Benjamin, primary, Rajasundaram, Skanda, additional, Cronjé, Héléne T, additional, Yarmolinsky, James, additional, Burgess, Stephen, additional, and Gill, Dipender, additional
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- 2023
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24. Mendelian randomization does not support serum calcium in prostate cancer risk
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Yarmolinsky, James, Berryman, Katie, Langdon, Ryan, Bonilla, Carolina, Smith, George Davey, Martin, Richard M., and Lewis, Sarah J.
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- 2018
25. Statins as Potential Chemoprevention or Therapeutic Agents in Cancer: a Model for Evaluating Repurposed Drugs
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Joharatnam-Hogan, Nalinie, Alexandre, Leo, Yarmolinsky, James, Lake, Blossom, Capps, Nigel, Martin, Richard M, Ring, Alistair, Cafferty, Fay, and Langley, Ruth E
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- 2021
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26. Genetically proxied therapeutic inhibition of antihypertensive drug targets and risk of common cancers: A mendelian randomization analysis
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Yarmolinsky, James, Díez-Obrero, Virginia, Richardson, Tom G., Pigeyre, Marie, Sjaarda, Jennifer, Paré, Guillaume, Walker, Venexia M., Vincent, Emma E., Tan, Vanessa Y., Obón-Santacana, Mireia, Albanes, Demetrius, Hampe, Jochen, Gsur, Andrea, Hampel, Heather, Pai, Rish K., Jenkins, Mark, Gallinger, Steven, Casey, Graham, Zheng, Wei, Amos, Christopher I., Smith, George Davey, Martin, Richard M., and Moreno, Victor
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Colorectal cancer -- Risk factors ,ACE inhibitors -- Complications and side effects ,Drug targeting -- Models -- Genetic aspects ,Hypertension -- Drug therapy -- Models ,Biological sciences - Abstract
Background Epidemiological studies have reported conflicting findings on the potential adverse effects of long-term antihypertensive medication use on cancer risk. Naturally occurring variation in genes encoding antihypertensive drug targets can be used as proxies for these targets to examine the effect of their long-term therapeutic inhibition on disease outcomes. Methods and findings We performed a mendelian randomization analysis to examine the association between genetically proxied inhibition of 3 antihypertensive drug targets and risk of 4 common cancers (breast, colorectal, lung, and prostate). Single-nucleotide polymorphisms (SNPs) in ACE, ADRB1, and SLC12A3 associated (P < 5.0 x 10.sup.-8) with systolic blood pressure (SBP) in genome-wide association studies (GWAS) were used to proxy inhibition of angiotensin-converting enzyme (ACE), [beta]-1 adrenergic receptor (ADRB1), and sodium-chloride symporter (NCC), respectively. Summary genetic association estimates for these SNPs were obtained from GWAS consortia for the following cancers: breast (122,977 cases, 105,974 controls), colorectal (58,221 cases, 67,694 controls), lung (29,266 cases, 56,450 controls), and prostate (79,148 cases, 61,106 controls). Replication analyses were performed in the FinnGen consortium (1,573 colorectal cancer cases, 120,006 controls). Cancer GWAS and FinnGen consortia data were restricted to individuals of European ancestry. Inverse-variance weighted random-effects models were used to examine associations between genetically proxied inhibition of these drug targets and risk of cancer. Multivariable mendelian randomization and colocalization analyses were employed to examine robustness of findings to violations of mendelian randomization assumptions. Genetically proxied ACE inhibition equivalent to a 1-mm Hg reduction in SBP was associated with increased odds of colorectal cancer (odds ratio (OR) 1.13, 95% CI 1.06 to 1.22; P = 3.6 x 10.sup.-4). This finding was replicated in the FinnGen consortium (OR 1.40, 95% CI 1.02 to 1.92; P = 0.035). There was little evidence of association of genetically proxied ACE inhibition with risk of breast cancer (OR 0.98, 95% CI 0.94 to 1.02, P = 0.35), lung cancer (OR 1.01, 95% CI 0.92 to 1.10; P = 0.93), or prostate cancer (OR 1.06, 95% CI 0.99 to 1.13; P = 0.08). Genetically proxied inhibition of ADRB1 and NCC were not associated with risk of these cancers. The primary limitations of this analysis include the modest statistical power for analyses of drug targets in relation to some less common histological subtypes of cancers examined and the restriction of the majority of analyses to participants of European ancestry. Conclusions In this study, we observed that genetically proxied long-term ACE inhibition was associated with an increased risk of colorectal cancer, warranting comprehensive evaluation of the safety profiles of ACE inhibitors in clinical trials with adequate follow-up. There was little evidence to support associations across other drug target-cancer risk analyses, consistent with findings from short-term randomized controlled trials for these medications., Author(s): James Yarmolinsky 1,2,*, Virginia Díez-Obrero 3,4,5, Tom G. Richardson 1,2, Marie Pigeyre 6,7,8, Jennifer Sjaarda 6,7,9, Guillaume Paré 6,7,9,10, Venexia M. Walker 1,2,11, Emma E. Vincent 1,2,12, Vanessa Y. [...]
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- 2022
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27. Genetically proxied IL-1 receptor antagonism and risk of polymyalgia rheumatica
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Zhao, Sizheng Steven, primary, Rajeswaran, Thurkka, additional, Mackie, Sarah L, additional, and Yarmolinsky, James, additional
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- 2023
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28. Assessing the association between fertility rates and wellbeing: a two-way fixed effect study
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Woolf, Benjamin, primary, Munafo, Marcus Robert, additional, Sallis, Hannah, additional, and Yarmolinsky, James, additional
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- 2023
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29. Identifying therapeutic targets for cancer: 2,094 circulating proteins and risk of nine cancers
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Smith-Byrne, Karl, primary, Hedman, Asa, additional, Dimitriou, Marios, additional, Desai, Trishna, additional, Sokolov, Alexandr V., additional, Schioth, Helgi B., additional, Koprulu, Mine, additional, Pietzner, Maik, additional, Langenberg, Claudia, additional, Atkins, Joshua, additional, Cortez, Ricardo, additional, McKay, James, additional, Brennan, Paul, additional, Zhou, Sirui, additional, Richards, Brent J., additional, Yarmolinsky, James, additional, Martin, Richard M., additional, Borlido, Joana, additional, Mu, Xinmeng J., additional, Butterworth, Adam, additional, Shen, Xia, additional, Wilson, Jim, additional, Assimes, Themistocles L., additional, Hung, Rayjean J., additional, Amos, Christopher, additional, Purdue, Mark, additional, Rothman, Nathaniel, additional, Chanock, Stephen, additional, Travis, Ruth C., additional, Johansson, Mattias, additional, and Malarstig, Anders, additional
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- 2023
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30. Artificially Sweetened Beverage Consumption Is Positively Associated with Newly Diagnosed Diabetes in Normal-Weight but Not in Overweight or Obese Brazilian Adults
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Yarmolinsky, James, Duncan, Bruce B, Chambless, Lloyd E, Bensenor, Isabela M, Barreto, Sandhi M, Goulart, Alessandra C, Santos, Itamar S, Diniz, Maria de Fátima Sander, and Schmidt, Maria Inês
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- 2016
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31. Association between circulating inflammatory markers and adult cancer risk: a Mendelian randomization analysis
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Yarmolinsky, James, Robinson, Jamie W, Mariosa, Daniela, Karhunen, Ville, Huang, Jian, Dimou, Niki, Murphy, Neil, Burrows, Kimberley, Bouras, Emmanouil, Smith-Byrne, Karl, Lewis, Sarah J, Galesloot, Tessel E, Kiemeney, Lambertus A, Vermeulen, Sita, Martin, Paul, Albanes, Demetrius, Hou, Lifang, Newcomb, Polly A, White, Emily, Wolk, Alicja, Wu, Anna H, Marchand, Loïc Le, Phipps, Amanda I, Buchanan, Daniel D, Zhao, Sizheng Steven, Gill, Dipender, Chanock, Stephen J, Purdue, Mark P, Smith, George Davey, Brennan, Paul, Herzig, Karl-Heinz, Jarvelin, Marjo-Riitta, Dehghan, Abbas, Johansson, Mattias, Gunter, Marc J, Tsilidis, Kostas K, and Martin, Richard M
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Article - Abstract
BACKGROUND: Tumour-promoting inflammation is a “hallmark” of cancer and conventional epidemiological studies have reported links between various inflammatory markers and cancer risk. The causal nature of these relationships and, thus, the suitability of these markers as intervention targets for cancer prevention is unclear. METHODS: We meta-analysed 6 genome-wide association studies of circulating inflammatory markers comprising 59,969 participants of European ancestry. We then used combined cis -Mendelian randomization and colocalisation analysis to evaluate the causal role of 66 circulating inflammatory markers in risk of 30 adult cancers in 338,162 cancer cases and up to 824,556 controls. Genetic instruments for inflammatory markers were constructed using genome-wide significant ( P < 5.0 x 10 (-8) ) cis -acting SNPs (i.e. in or ±250 kb from the gene encoding the relevant protein) in weak linkage disequilibrium (LD, r (2) < 0.10). Effect estimates were generated using inverse-variance weighted random-effects models and standard errors were inflated to account for weak LD between variants with reference to the 1000 Genomes Phase 3 CEU panel. A false discovery rate (FDR)-corrected P -value (“ q -value”) < 0.05 was used as a threshold to define “strong evidence” to support associations and 0.05 ≤ q -value < 0.20 to define “suggestive evidence”. A colocalisation posterior probability (PPH (4) ) > 70% was employed to indicate support for shared causal variants across inflammatory markers and cancer outcomes. RESULTS: We found strong evidence to support an association of genetically-proxied circulating pro-adrenomedullin concentrations with increased breast cancer risk (OR 1.19, 95% CI 1.10-1.29, q -value=0.033, PPH (4) =84.3%) and suggestive evidence to support associations of interleukin-23 receptor concentrations with increased pancreatic cancer risk (OR 1.42, 95% CI 1.20-1.69, q -value=0.055, PPH (4) =73.9%), prothrombin concentrations with decreased basal cell carcinoma risk (OR 0.66, 95% CI 0.53-0.81, q -value=0.067, PPH (4) =81.8%), macrophage migration inhibitory factor concentrations with increased bladder cancer risk (OR 1.14, 95% CI 1.05-1.23, q -value=0.072, PPH (4) =76.1%), and interleukin-1 receptor-like 1 concentrations with decreased triple-negative breast cancer risk (OR 0.92, 95% CI 0.88-0.97, q -value=0.15), PPH (4) =85.6%). For 22 of 30 cancer outcomes examined, there was little evidence ( q -value ≥ 0.20) that any of the 66 circulating inflammatory markers examined were associated with cancer risk. CONCLUSION: Our comprehensive joint Mendelian randomization and colocalisation analysis of the role of circulating inflammatory markers in cancer risk identified potential roles for 5 circulating inflammatory markers in risk of 5 site-specific cancers. Contrary to reports from some prior conventional epidemiological studies, we found little evidence of association of circulating inflammatory markers with the majority of site-specific cancers evaluated.
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- 2023
32. Strategies to investigate and mitigate collider bias in genetic and Mendelian randomisation studies of disease progression
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Mitchell, Ruth E., primary, Hartley, April E., additional, Walker, Venexia M., additional, Gkatzionis, Apostolos, additional, Yarmolinsky, James, additional, Bell, Joshua A., additional, Chong, Amanda H. W., additional, Paternoster, Lavinia, additional, Tilling, Kate, additional, and Smith, George Davey, additional
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- 2023
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33. Re-evaluating the robustness of Mendelian randomisation to measurement error
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Woolf, Benjamin, primary, Yarmolinsky, James, additional, Karhunen, Ville, additional, Tilling, Kate, additional, and Gill, Dipender, additional
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- 2022
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34. MR Base reporting quality
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Woolf, Benjamin, Richmond, Rebecca, and Yarmolinsky, James
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- 2022
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35. Genetically-proxied impaired GIPR signalling and risk of 6 cancers
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Rogers, Miranda, primary, Gill, Dipender, additional, Ahlqvist, Emma, additional, Robinson, Tim, additional, Mariosa, Daniela, additional, Johansson, Mattias, additional, Penha, Ricardo Cortez Cardoso, additional, Dossus, Laure, additional, Gunter, Marc J, additional, Moreno, Victor, additional, Davey Smith, George, additional, Martin, Richard M, additional, and Yarmolinsky, James, additional
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- 2022
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36. Appraising the role of previously reported risk factors in epithelial ovarian cancer risk: A Mendelian randomization analysis
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Yarmolinsky, James, Relton, Caroline L., Lophatananon, Artitaya, Muir, Kenneth, Menon, Usha, Gentry-Maharaj, Aleksandra, Walther, Axel, Zheng, Jie, Fasching, Peter, Zheng, Wei, Yin Ling, Woo, Park, Sue K., Kim, Byoung-Gie, Choi, Ji-Yeob, Park, Boyoung, Davey Smith, George, Martin, Richard M., and Lewis, Sarah J.
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Single nucleotide polymorphisms -- Research ,Ovarian cancer -- Genetic aspects -- Risk factors ,Carcinogenesis ,Cancer research ,Genetics ,Hormones ,Polycystic ovary syndrome ,Carcinoma ,Chromosomes ,Medical research ,Type 2 diabetes ,Genomics ,Legal liability ,Genetic polymorphisms ,Epidemiology ,Menopause ,Tumors ,Endometriosis ,Proxy ,Genetic research ,Hormone replacement therapy ,Oral contraceptives ,Novels ,Biological sciences - Abstract
Background Various risk factors have been associated with epithelial ovarian cancer risk in observational epidemiological studies. However, the causal nature of the risk factors reported, and thus their suitability as effective intervention targets, is unclear given the susceptibility of conventional observational designs to residual confounding and reverse causation. Mendelian randomization (MR) uses genetic variants as proxies for risk factors to strengthen causal inference in observational studies. We used MR to evaluate the association of 12 previously reported risk factors (reproductive, anthropometric, clinical, lifestyle, and molecular factors) with risk of invasive epithelial ovarian cancer, invasive epithelial ovarian cancer histotypes, and low malignant potential tumours. Methods and findings Genetic instruments to proxy 12 risk factors were constructed by identifying single nucleotide polymorphisms (SNPs) that were robustly (P < 5 x 10.sup.-8) and independently associated with each respective risk factor in previously reported genome-wide association studies. These risk factors included genetic liability to 3 factors (endometriosis, polycystic ovary syndrome, type 2 diabetes) scaled to reflect a 50% higher odds liability to disease. We obtained summary statistics for the association of these SNPs with risk of overall and histotype-specific invasive epithelial ovarian cancer (22,406 cases; 40,941 controls) and low malignant potential tumours (3,103 cases; 40,941 controls) from the Ovarian Cancer Association Consortium (OCAC). The OCAC dataset comprises 63 genotyping project/case-control sets with participants of European ancestry recruited from 14 countries (US, Australia, Belarus, Germany, Belgium, Denmark, Finland, Norway, Canada, Poland, UK, Spain, Netherlands, and Sweden). SNPs were combined into multi-allelic inverse-variance-weighted fixed or random effects models to generate effect estimates and 95% confidence intervals (CIs). Three complementary sensitivity analyses were performed to examine violations of MR assumptions: MR-Egger regression and weighted median and mode estimators. A Bonferroni-corrected P value threshold was used to establish strong evidence (P < 0.0042) and suggestive evidence (0.0042 < P < 0.05) for associations. In MR analyses, there was strong or suggestive evidence that 2 of the 12 risk factors were associated with invasive epithelial ovarian cancer and 8 of the 12 were associated with 1 or more invasive epithelial ovarian cancer histotypes. There was strong evidence that genetic liability to endometriosis was associated with an increased risk of invasive epithelial ovarian cancer (odds ratio [OR] per 50% higher odds liability: 1.10, 95% CI 1.06-1.15; P = 6.94 x 10.sup.-7) and suggestive evidence that lifetime smoking exposure was associated with an increased risk of invasive epithelial ovarian cancer (OR per unit increase in smoking score: 1.36, 95% CI 1.04-1.78; P = 0.02). In analyses examining histotypes and low malignant potential tumours, the strongest associations found were between height and clear cell carcinoma (OR per SD increase: 1.36, 95% CI 1.15-1.61; P = 0.0003); age at natural menopause and endometrioid carcinoma (OR per year later onset: 1.09, 95% CI 1.02-1.16; P = 0.007); and genetic liability to polycystic ovary syndrome and endometrioid carcinoma (OR per 50% higher odds liability: 0.89, 95% CI 0.82-0.96; P = 0.002). There was little evidence for an association of genetic liability to type 2 diabetes, parity, or circulating levels of 25-hydroxyvitamin D and sex hormone binding globulin with ovarian cancer or its subtypes. The primary limitations of this analysis include the modest statistical power for analyses of risk factors in relation to some less common ovarian cancer histotypes (low grade serous, mucinous, and clear cell carcinomas), the inability to directly examine the association of some ovarian cancer risk factors that did not have robust genetic variants available to serve as proxies (e.g., oral contraceptive use, hormone replacement therapy), and the assumption of linear relationships between risk factors and ovarian cancer risk. Conclusions Our comprehensive examination of possible aetiological drivers of ovarian carcinogenesis using germline genetic variants to proxy risk factors supports a role for few of these factors in invasive epithelial ovarian cancer overall and suggests distinct aetiologies across histotypes. The identification of novel risk factors remains an important priority for the prevention of epithelial ovarian cancer., Author(s): James Yarmolinsky 1,2, Caroline L. Relton 1,2,3, Artitaya Lophatananon 4, Kenneth Muir 4, Usha Menon 5, Aleksandra Gentry-Maharaj 5, Axel Walther 6, Jie Zheng 1,2, Peter Fasching 7, Wei [...]
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- 2019
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37. Strategies to investigate and mitigate collider bias in genetic and Mendelian randomization studies of disease progression
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Mitchell, Ruth E., primary, Hartley, April, additional, Walker, Venexia M., additional, Gkatzionis, Apostolos, additional, Yarmolinsky, James, additional, Bell, Joshua A., additional, Chong, Amanda H. W., additional, Paternoster, Lavinia, additional, Tilling, Kate, additional, and Smith, George Davey, additional
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- 2022
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38. Genetically proxied PCSK9 inhibition provides indication of lower prostate cancer risk: a Mendelian randomization study
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Fang, Si, primary, Yarmolinsky, James, additional, Gill, Dipender, additional, Bull, Caroline J, additional, Perks, Claire M, additional, Davey Smith, George, additional, Gaunt, Tom R, additional, and Richardson, Tom G, additional
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- 2022
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39. Investigating the transparency of reporting in two-sample summary data Mendelian randomization studies using the MR-Base platform
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Woolf, Benjamin, primary, Di Cara, Nina, additional, Moreno-Stokoe, Christopher, additional, Skrivankova, Veronika, additional, Drax, Katie, additional, Higgins, Julian P T, additional, Hemani, Gibran, additional, Munafò, Marcus R, additional, Davey Smith, George, additional, Yarmolinsky, James, additional, and Richmond, Rebecca C, additional
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- 2022
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40. Circulating inflammatory cytokines and risk of five cancers: a Mendelian randomization analysis
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PRACTICAL Consortium, Bouras, Emmanouil, Karhunen, Ville, Gill, Dipender, Huang, Jian, Haycock, Philip C, Gunter, Marc J, Johansson, Mattias, Brennan, Paul, Key, Tim, Lewis, Sarah J, Martin, Richard M, Murphy, Neil, Platz, Elizabeth A, Travis, Ruth, Yarmolinsky, James, Zuber, Verena, Martin, Paul, Katsoulis, Michail, Freisling, Heinz, Nøst, Therese Haugdahl, Schulze, Matthias B, Dossus, Laure, Hung, Rayjean J, Amos, Christopher I, Ahola-Olli, Ari, Palaniswamy, Saranya, Männikkö, Minna, Auvinen, Juha, Herzig, Karl-Heinz, Keinänen-Kiukaanniemi, Sirkka, Lehtimäki, Terho, Salomaa, Veikko, Raitakari, Olli, Salmi, Marko, Jalkanen, Sirpa, Jarvelin, Marjo-Riitta, Dehghan, Abbas, Tsilidis, Konstantinos K, Institute for Molecular Medicine Finland, Genomics of Neurological and Neuropsychiatric Disorders, Tampere University, Department of Clinical Chemistry, and Clinical Medicine
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Male ,SUSCEPTIBILITY LOCI ,BIOMARKERS ,Polymorphism, Single Nucleotide ,OVARIAN-CANCER ,03 medical and health sciences ,0302 clinical medicine ,MARKERS ,Meta-Analysis as Topic ,Risk Factors ,Mendelian randomization ,PROSTATE ,INTERLEUKIN-1 ,Humans ,Mendelian randomisation ,METAANALYSIS ,030304 developmental biology ,Cancer ,Ovarian Neoplasms ,Inflammation ,0303 health sciences ,CHALLENGES ,Cytokines/genetics ,General Medicine ,Mendelian Randomization Analysis ,3. Good health ,3121 General medicine, internal medicine and other clinical medicine ,030220 oncology & carcinogenesis ,METASTASIS ,Medicine ,Cytokines ,Female ,3111 Biomedicine ,Ovarian Neoplasms/epidemiology ,ICEP ,LUNG ,Research Article ,Genome-Wide Association Study - Abstract
Background Epidemiological and experimental evidence has linked chronic inflammation to cancer aetiology. It is unclear whether associations for specific inflammatory biomarkers are causal or due to bias. In order to examine whether altered genetically predicted concentration of circulating cytokines are associated with cancer development, we performed a two-sample Mendelian randomisation (MR) analysis. Methods Up to 31,112 individuals of European descent were included in genome-wide association study (GWAS) meta-analyses of 47 circulating cytokines. Single nucleotide polymorphisms (SNPs) robustly associated with the cytokines, located in or close to their coding gene (cis), were used as instrumental variables. Inverse-variance weighted MR was used as the primary analysis, and the MR assumptions were evaluated in sensitivity and colocalization analyses and a false discovery rate (FDR) correction for multiple comparisons was applied. Corresponding germline GWAS summary data for five cancer outcomes (breast, endometrial, lung, ovarian, and prostate), and their subtypes were selected from the largest cancer-specific GWASs available (cases ranging from 12,906 for endometrial to 133,384 for breast cancer). Results There was evidence of inverse associations of macrophage migration inhibitory factor with breast cancer (OR per SD = 0.88, 95% CI 0.83 to 0.94), interleukin-1 receptor antagonist with endometrial cancer (0.86, 0.80 to 0.93), interleukin-18 with lung cancer (0.87, 0.81 to 0.93), and beta-chemokine-RANTES with ovarian cancer (0.70, 0.57 to 0.85) and positive associations of monokine induced by gamma interferon with endometrial cancer (3.73, 1.86 to 7.47) and cutaneous T-cell attracting chemokine with lung cancer (1.51, 1.22 to 1.87). These associations were similar in sensitivity analyses and supported in colocalization analyses. Conclusions Our study adds to current knowledge on the role of specific inflammatory biomarker pathways in cancer aetiology. Further validation is needed to assess the potential of these cytokines as pharmacological or lifestyle targets for cancer prevention.
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- 2022
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41. Additional file 4 of Circulating inflammatory cytokines and risk of five cancers: a Mendelian randomization analysis
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Bouras, Emmanouil, Karhunen, Ville, Gill, Dipender, Huang, Jian, Haycock, Philip C., Gunter, Marc J., Johansson, Mattias, Brennan, Paul, Key, Tim, Lewis, Sarah J., Martin, Richard M., Murphy, Neil, Platz, Elizabeth A., Travis, Ruth, Yarmolinsky, James, Zuber, Verena, Martin, Paul, Katsoulis, Michail, Freisling, Heinz, N��st, Therese Haugdahl, Schulze, Matthias B., Dossus, Laure, Hung, Rayjean J., Amos, Christopher I., Ahola-Olli, Ari, Palaniswamy, Saranya, M��nnikk��, Minna, Auvinen, Juha, Herzig, Karl-Heinz, Kein��nen-Kiukaanniemi, Sirkka, Lehtim��ki, Terho, Salomaa, Veikko, Raitakari, Olli, Salmi, Marko, Jalkanen, Sirpa, Jarvelin, Marjo-Riitta, Dehghan, Abbas, and Tsilidis, Konstantinos K.
- Abstract
Additional file 4. (Supplemental Figures): Supplementary figure 1. Correlation of MR-IVW estimates (betas) using the two different instrument definitions. Y axis represents the MR IVW estimates using the cis-eQTL and X axis represents the MR IVW estimates using the cis-pQTL instrument definition. Supplementary figure 2. Associations that showed MR evidence for both causality and colocalization (posterior probability>0.8) are plotted, within ��500 kb of the gene locus of the exposure cytokine.
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- 2022
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42. Additional file 1 of Circulating inflammatory cytokines and risk of five cancers: a Mendelian randomization analysis
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Bouras, Emmanouil, Karhunen, Ville, Gill, Dipender, Huang, Jian, Haycock, Philip C., Gunter, Marc J., Johansson, Mattias, Brennan, Paul, Key, Tim, Lewis, Sarah J., Martin, Richard M., Murphy, Neil, Platz, Elizabeth A., Travis, Ruth, Yarmolinsky, James, Zuber, Verena, Martin, Paul, Katsoulis, Michail, Freisling, Heinz, N��st, Therese Haugdahl, Schulze, Matthias B., Dossus, Laure, Hung, Rayjean J., Amos, Christopher I., Ahola-Olli, Ari, Palaniswamy, Saranya, M��nnikk��, Minna, Auvinen, Juha, Herzig, Karl-Heinz, Kein��nen-Kiukaanniemi, Sirkka, Lehtim��ki, Terho, Salomaa, Veikko, Raitakari, Olli, Salmi, Marko, Jalkanen, Sirpa, Jarvelin, Marjo-Riitta, Dehghan, Abbas, and Tsilidis, Konstantinos K.
- Abstract
Additional file 1. Members from the PRACTICAL Consortium, CRUK, BPC3, CAPS and PEGASUS.
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- 2022
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43. Additional file 3 of Identifying molecular mediators of the relationship between body mass index and endometrial cancer risk: a Mendelian randomization analysis
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Hazelwood, Emma, Sanderson, Eleanor, Tan, Vanessa Y., Ruth, Katherine S., Frayling, Timothy M., Dimou, Niki, Gunter, Marc J., Dossus, Laure, Newton, Claire, Ryan, Neil, Pournaras, Dimitri J., O’Mara, Tracy A., Davey Smith, George, Martin, Richard M., and Yarmolinsky, James
- Abstract
Additional file 3: Appendix S16. STROBE-MR checklist of recommended items to address in reports of Mendelian randomization studies.
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- 2022
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44. Additional file 3 of Circulating inflammatory cytokines and risk of five cancers: a Mendelian randomization analysis
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Bouras, Emmanouil, Karhunen, Ville, Gill, Dipender, Huang, Jian, Haycock, Philip C., Gunter, Marc J., Johansson, Mattias, Brennan, Paul, Key, Tim, Lewis, Sarah J., Martin, Richard M., Murphy, Neil, Platz, Elizabeth A., Travis, Ruth, Yarmolinsky, James, Zuber, Verena, Martin, Paul, Katsoulis, Michail, Freisling, Heinz, N��st, Therese Haugdahl, Schulze, Matthias B., Dossus, Laure, Hung, Rayjean J., Amos, Christopher I., Ahola-Olli, Ari, Palaniswamy, Saranya, M��nnikk��, Minna, Auvinen, Juha, Herzig, Karl-Heinz, Kein��nen-Kiukaanniemi, Sirkka, Lehtim��ki, Terho, Salomaa, Veikko, Raitakari, Olli, Salmi, Marko, Jalkanen, Sirpa, Jarvelin, Marjo-Riitta, Dehghan, Abbas, and Tsilidis, Konstantinos K.
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musculoskeletal diseases ,stomatognathic system ,endocrine system diseases ,nutritional and metabolic diseases - Abstract
Additional file 3. Supplemental Methods (Details on the Finnish GWAS, the meta-analysis with the SCALLOP or the INTERVAL GWAS and the Mendelian randomisation analyses).
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45. Additional file 1 of Identifying molecular mediators of the relationship between body mass index and endometrial cancer risk: a Mendelian randomization analysis
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Hazelwood, Emma, Sanderson, Eleanor, Tan, Vanessa Y., Ruth, Katherine S., Frayling, Timothy M., Dimou, Niki, Gunter, Marc J., Dossus, Laure, Newton, Claire, Ryan, Neil, Pournaras, Dimitri J., O’Mara, Tracy A., Davey Smith, George, Martin, Richard M., and Yarmolinsky, James
- Abstract
Additional file 1: Appendix S1. Supplementary methods. Appendix S2. List of unique molecular traits identified from literature search. Appendix S3. PubMed search terms for literature review. Table S4. Additional information on GWAS, including covariates adjusted for. Table S6. Results of female BMI sensitivity analysis MR. Table S7. Results of female-specific SNP fasting insulin sensitivity analysis MR. Table S8. Results of female-specific SNP BMI sensitivity mediation analysis. Table S9. Results of female-specific SNP fasting insulin mediation analysis. Table S10. Results of post-hoc power analysis for MR of all molecular traits on endometrial cancer risk, and BMI on all traits confirmed to have a causal effect on endometrial cancer. Table S11. Conditional F-statistics with different levels of genetic correlation for SHBG and bioavailable testosterone and BMI in multivariable Mendelian randomization analyses. Table S12. Conditional F-statistics for fasting insulin (adjusted for BMI) and BMI with differing thresholds used to construct fasting insulin. Table S13. Conditional F-statistics for multivariable Mendelian randomization of BMI and mediators on endometrial cancer risk. Table S14. Conditional F-statistics for further multivariable Mendelian randomization analyses. Table S15. Sample overlap between GWAS. Figure S17. Leave-one-out analysis for MR examining the effect of adult BMI on overall endometrial cancer risk. Table S18. Results from sensitivity analyses examining the influence of Winner’s curse on GWAS with overlapping samples. Table S19. Results from sensitivity analyses examining the influence of Winner’s curse on GWAS with overlapping samples in analyses determining the mediating role of traits in the relationship between BMI and endometrial cancer risk. Figure S20. Leave-one-out analysis for MR examining the effect of adult BMI on endometrioid endometrial cancer risk. Figure S21. Leave-one-out analysis for MR examining the effect of adult BMI on non-endometrioid endometrial cancer risk. Figure S22. Leave-one-out analysis for MR examining the effect of total testosterone level on endometrial cancer risk. Figure S23. Leave-one-out analysis for MR examining the effect of bioavailable testosterone level on endometrial cancer risk. Figure S24. Leave-one-out analysis for MR examining the effect of fasting insulin level on endometrial cancer risk. Figure S25. Leave-one-out analysis for MR examining the effect of SHBG level on endometrial cancer risk. Figure S26. Leave-one-out analysis for MR examining the effect of total serum cholesterol level on endometrial cancer risk. Table S27. Results of female-specific SNP CRP sensitivity analysis MR. Figure S28. Leave-one-out analysis for MR examining the effect of total testosterone level on endometrioid endometrial cancer risk. Figure S29. Leave-one-out analysis for MR examining the effect of bioavailable testosterone level on endometrioid endometrial cancer risk. Figure S30. Leave-one-out analysis for MR examining the effect of fasting insulin level on endometrioid endometrial cancer risk. Figure S31. Leave-one-out analysis for MR examining the effect of SHBG level on endometrioid endometrial cancer risk. Figure S32. Leave-one-out analysis for MR examining the effect of adult BMI on fasting insulin level. Figure S33. Leave-one-out analysis for MR examining the effect of adult BMI on SHBG level. Figure S34. Leave-one-out analysis for MR examining the effect of adult BMI on bioavailable testosterone level. Figure S35. Leave-one-out analysis for MR examining the effect of adult BMI on total serum cholesterol level. Figure S36. Leave-one-out analysis for MR examining the effect of adult BMI on C-reactive protein level. Table S37. Results of multivariable MR mediation analysis examining the effect of BMI and endometrial cancer with fasting insulin as a potential mediator with BMI-adjusted fasting insulin instrument and 100 SNPs from BMI instrument. Table S38. Results of sensitivity analysis examining the effect of only including 100 SNPs for the BMI instrument in MR analyses. Table S39. Results of multivariable MR mediation analysis examining the effect of BMI and endometrial cancer with fasting insulin as a potential mediator with 100 SNPs from BMI instrument. Table S40. Results of multivariable MR mediation analysis examining the effect of BMI and endometrial cancer with fasting insulin as a potential mediator with BMI-adjusted fasting insulin instrument. Table S41. Results of multivariable MR mediation analysis examining the effect of endometrial cancer with pairs of confirmed mediating molecular traits without BMI. Table S42. Results of multivariable MR mediation analysis examining the effect of BMI and endometrial cancer with all confirmed mediating molecular traits with BMI-adjusted fasting insulin. Table S43. Results of multivariable MR mediation analysis examining the effect of BMI and endometrial cancer with pairs of confirmed mediating molecular traits. Table S44. Results of multivariable MR mediation analysis examining the effect of BMI and endometrial cancer with all confirmed mediating molecular traits including fasting insulin adjusted for BMI with 100 SNPs from BMI instrument. Table S45. Results of multivariable MR mediation analysis examining the effect of BMI and endometrial cancer with pairs of confirmed mediating molecular traits with 100 SNPs from BMI instrument. Table S46. Results of multivariable MR mediation analysis examining the effect of endometrial cancer with all confirmed mediating molecular traits without BMI. Table S47. Results from sensitivity analyses examining the influence of Winner’s curse on GWAS with overlapping samples in analyses determining the interdependent effects of mediators of the relationship between BMI and endometrial cancer risk. Table S48. Results of HEIDI test-filtered low-density lipoprotein (LDL) cholesterol and overall endometrial cancer MR.
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- 2022
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46. Identifying molecular mediators of the relationship between body mass index and endometrial cancer risk: a Mendelian randomization analysis
- Author
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Hazelwood, Emma, primary, Sanderson, Eleanor, additional, Tan, Vanessa Y, additional, Ruth, Katherine S, additional, Frayling, Timothy M, additional, Dimou, Niki, additional, Gunter, Marc J, additional, Dossus, Laure, additional, Newton, Claire, additional, Ryan, Neil, additional, Pournaras, Dimitri J, additional, O'Mara, Tracy A, additional, Davey Smith, George, additional, Martin, Richard M, additional, and Yarmolinsky, James, additional
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- 2021
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47. Strengthening the Reporting of Observational Studies in Epidemiology Using Mendelian Randomization
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Skrivankova, Veronika W., primary, Richmond, Rebecca C., additional, Woolf, Benjamin A. R., additional, Yarmolinsky, James, additional, Davies, Neil M., additional, Swanson, Sonja A., additional, VanderWeele, Tyler J., additional, Higgins, Julian P. T., additional, Timpson, Nicholas J., additional, Dimou, Niki, additional, Langenberg, Claudia, additional, Golub, Robert M., additional, Loder, Elizabeth W., additional, Gallo, Valentina, additional, Tybjaerg-Hansen, Anne, additional, Davey Smith, George, additional, Egger, Matthias, additional, and Richards, J. Brent, additional
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- 2021
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48. Investigating the transparency of reporting in two-sample summary data Mendelian randomization studies
- Author
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Woolf, Benjamin, primary, Cara, Nina Di, additional, Moreno-Stokoe, Christopher, additional, Skrivankova, Veronika, additional, Drax, Katie, additional, Higgins, Julian P.T., additional, Hemani, Gibran, additional, Munafò, Marcus R., additional, Smith, George Davey, additional, Yarmolinsky, James, additional, and Richmond, Rebecca C., additional
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- 2021
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49. Plasminogen activator inhibitor-1 and type 2 diabetes: a systematic review and meta-analysis of observational studies
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Yarmolinsky, James, Bordin Barbieri, Natália, Weinmann, Tobias, Ziegelmann, Patricia K., Duncan, Bruce B., and Schmidt, Maria Inês
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- 2016
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50. Effect of tea on blood pressure for secondary prevention of cardiovascular disease: a systematic review and meta-analysis of randomized controlled trials
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Yarmolinsky, James, Gon, Giorgia, and Edwards, Phil
- Published
- 2015
- Full Text
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