86 results on '"Yari S"'
Search Results
2. Generalized quasi-cyclic codes: structural properties and code construction
- Author
-
Esmaeili, M. and Yari, S.
- Published
- 2009
- Full Text
- View/download PDF
3. Determining the Relationship and Predictive Role of Sense of Meaning in Life and Sense of Coherence in Post-Traumatic Growth in Recovered Married People from Coronavirus in Ilam.
- Author
-
Yari, S. Dolat, Shirvani, E., Yousefi, E., and Khajehpour, L.
- Abstract
The aim of this study is to determine the relationship and predictive contribution of sense of meaning in life and sense of coherence in post-traumatic growth in re-covered married people from COVID-19 in Ilam. The design of the present study was quantitative, cross-sectional and correlational, in which the relationship and prediction of the dependent variable (post-traumatic growth) was determined based on independent variables (sense of meaning in life and sense of cohesion).The statistical population of the present study included all patients with coronary heart disease (5000 people) in Ilam city who were discharged from Mostafa Khomeini Hospital in Region 4 (Ilam). The sample of this study was determined based on the number of statistical population; in this way, first the population size was determined and then according to Morgan table, the sample size (350 people) was calculated and 198 were male and 152 were female. The sampling method was random. Data were collected based on the Meaning of Life Questionnaire by Estger and Oishi (2004), the Antonovsky Coherence Questionnaire (1993) and the Tedeschi Vacalon Post-Traumatic Development Questionnaire (1996). The results showed that the sense of meaning in life and the sense of cohesion significantly predict posttraumatic growth. This means that the higher the sense of meaning in life and the sense of cohesion in those who have recovered from COVID-19, the more post-traumatic growth they experienced (p<0.05). Based on these results, it can be said that strengthening the sense of meaning in life and the sense of cohesion in people with coronavirus can be considered as an important item for the possibility of tolerating this disease, as well as changes and positive growth after it. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
4. The utility of 99mTc-DMSA and Tc99m-EC scintigraphy for early diagnosis of ifosfamide induced nephrotoxicity
- Author
-
CAGLAR, M., YARI´S, N., and AKYUZ, C.
- Published
- 2001
5. Effects of Different Levels of Zeolite on Plant Growth and Amount of Gel Production in Aloe vera L. under Different Irrigation
- Author
-
Yari, S., Farahnaz Khalighi-Sigaroodi, and Moradi, P.
- Subjects
RA1190-1270 ,Toxicology. Poisons ,aloin ,aloe vera l ,vitamin c ,Therapeutics. Pharmacology ,RM1-950 ,zeolite ,irrigation - Abstract
Background: Researcherschr('39') attention has been focused on Aloe vera for a long time due to the numerous medicinal effects of this plant and its application in various fields of food, cosmetic and hygienic industries. Objective: This study was conducted to evaluate the different levels of Zeolite and irrigation conditions on vegetative growth and quantitative and qualitative changes in plant gel. Methods: It is based on a factorial randomized complete block design with 4 levels of Zeolite in soil and 3 levels of irrigation, in 3 replications. After 5 months, morphological traits were measured. Also the amount of aloin in leaf and vitamin C in the gel were measured. Results: The best results of morphological traits were obtained with 22 g Zeolite treatment in 5 kg pots of soil and 21 days irrigation. The highest amount of aloin was observed in 44 g Zeolite treatment in 5 kg pots of soil with 7 days irrigation. The highest amount of vitamin C was obtained in 44 g Zeolite treatment in 5 kg pots of soil with 14 days irrigation. Conclusion: The overall results showed that zeolite plays an important role in promoting growth and increasing secondary metabolites in plant Aloe vera under different irrigation.
- Published
- 2013
6. Single-cell spatial proteomic imaging for human neuropathology
- Author
-
Kausalia Vijayaragavan, Bryan J. Cannon, Dmitry Tebaykin, Marc Bossé, Alex Baranski, J. P. Oliveria, Syed A. Bukhari, Dunja Mrdjen, M. Ryan Corces, Erin F. McCaffrey, Noah F. Greenwald, Yari Sigal, Diana Marquez, Zumana Khair, Trevor Bruce, Mako Goldston, Anusha Bharadwaj, Kathleen S. Montine, R. Michael Angelo, Thomas J. Montine, and Sean C. Bendall
- Subjects
Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Neurodegenerative disorders are characterized by phenotypic changes and hallmark proteopathies. Quantifying these in archival human brain tissues remains indispensable for validating animal models and understanding disease mechanisms. We present a framework for nanometer-scale, spatial proteomics with multiplex ion beam imaging (MIBI) for capturing neuropathological features. MIBI facilitated simultaneous, quantitative imaging of 36 proteins on archival human hippocampus from individuals spanning cognitively normal to dementia. Customized analysis strategies identified cell types and proteopathies in the hippocampus across stages of Alzheimer’s disease (AD) neuropathologic change. We show microglia-pathologic tau interactions in hippocampal CA1 subfield in AD dementia. Data driven, sample independent creation of spatial proteomic regions identified persistent neurons in pathologic tau neighborhoods expressing mitochondrial protein MFN2, regardless of cognitive status, suggesting a survival advantage. Our study revealed unique insights from multiplexed imaging and data-driven approaches for neuropathologic analysis and serves broadly as a methodology for spatial proteomic analysis of archival human neuropathology. Teaser Multiplex Ion beam Imaging enables deep spatial phenotyping of human neuropathology-associated cellular and disease features.
- Published
- 2022
- Full Text
- View/download PDF
7. Assessment of line stability indices in detection of voltage stability status
- Author
-
Yari, S., primary and Khoshkhoo, H., additional
- Published
- 2017
- Full Text
- View/download PDF
8. Direct estimate of water, heat, and salt transport through the Strait of Otranto
- Author
-
Yari, S., Kovačević, Vedrana, Cardin, V., Gačić, Miroslav, and Bryden, H.
- Subjects
water ,heat ,salt ,transport ,Strait of Otranto - Abstract
The transport of water volume, salt and heat was calculated using continuous measurements of currents in the Otranto Strait for a one-year period in 1994-95. Temperature and salinity data sets, available from five hydrographic surveys, were used to obtain the seasonal temperature and salinity distributions at the Otranto transect. The Variational Inverse Method (VIM) was applied to reconstruct spatial distributions of the de- tided low-pass inflowing current component, salinity and temperature. Errors associated with estimates of transports are influenced by the data coverage: the higher the spatial resolution, the smaller the error and vice versa. Volume transport reaches a maximum in winter and spring and attains its minimum in summer. The obtained volume transport [similar to 1 Sv (10(6) m(3)s(-1))] should be considered a lower limit value since in that period the Adriatic was producing relatively small quantities of deep water due to the inflow of low-salinity (high buoyancy) waters and relatively mild winters. Comparing the mean advective heat input and the air-sea heat loss, the same order of magnitude between the two has been obtained which is satisfactory considering the possible errors of the two approaches. The relative importance of the eddy heat transport to the total transport is estimated to be only about 5% and thus it can be neglected in a first approximation. The salt transport estimates show a net input, suggesting a salinity increase during the period of study ; this was confirmed from the long-term salinity data in the Southern Adriatic.
- Published
- 2012
9. How deposition parameters affect corrosion behavior of TiO2-Al2O3 nanocomposite coatings
- Author
-
Niazi, H., primary, Yari, S., additional, Golestani-Fard, F., additional, Shahmiri, M., additional, Wang, W., additional, Alfantazi, A., additional, and Bayati, R., additional
- Published
- 2015
- Full Text
- View/download PDF
10. Can internal processes sustain reversals of the ocean upper circulation? The Ionian Sea example
- Author
-
Gačić, Miroslav, Eusebi Borzelli, G.L., Civitarese, G., Cardin, V., and Yari, S.
- Abstract
In 1997 an inversion in the Ionian upper-layer circulation was documented and ascribed to a massive inflow of Aegean dense waters associated with the Eastern Mediterranean Transient (EMT) and not to the wind-stress (Borzelli et al., 2009). Here we generalize the concept hypothesizing that such inversions are possible even in the absence of the Aegean influence. Indeed, salinity and density data collected in the Southern Adriatic, the main source of the Eastern Mediterranean deep water, show decadal variations coherent with changes in the sea level height in the northern Ionian. Scaling considerations suggest that the redistribution of Ionian water masses, resulting from changes in the thermohaline properties of waters entering the basin, can sustain inversions of the upper-layer circulation. Therefore, we propose a feedback mechanism (named the Adriatic-Ionian Bimodal Oscillating System - BiOS) between variations in the thermohaline properties of waters formed in the Southern Adriatic and the Ionian circulation.
- Published
- 2010
11. Surface current patterns in front of the Venice Lagoon
- Author
-
Gačić, Miroslav, Kovačević, Vedrana, Mazzoldi, A., Paduan, J.D., Mancero-Mosquera, I., and Yari, S.
- Subjects
Adriatic Sea ,surface circulation ,eddies and mesoscale processes ,wind-driven currents ,tidal forcing ,HF coastal radar - Abstract
Surface patterns of the low-frequency current in a 20 x 30 km region in front of the Venice Lagoon were analysed from a 13-month-long HF radar data set. Sur-face circulation was related to prevalent wind regimes in the area and to the tidal flow through the lagoon inlet. Three different categories of wind-forcing were defined: bora (NE wind), sirocco (SE wind), and finally the category containing all other wind directions and calms (winds lower than 3 m/sec). Mean flow and vorticity spatial distributions were discussed for different wind conditions. The coastal area about 5 km wide is characterized by a flow field with maximum vorticity. Outside the coastal boundary layer the interior flow is part of the Adriatic basin-wide cyclonic circulation. Two counter-rotating vortices of the dimension of about 4-5 km were evidenced in the average flow field in front of the lagoon inlet (Malamocco inlet) in all situations except for the bora. The vortex-pair is probably associated with the tidal flow through the inlet. The bora wind induces a strong southward coastal jet detached from the coast by about 5 km homogenizing the flow and eliminating the dipole. The average coastal flow pattern in calm wind conditions was also analysed as a function of the strong inflow/outflow (currents in the inlet > 0.7 m s(-1)) from the lagoon inlet. In both cases the vorticity pattern is similar, with the negative vorticity to the left of the inlet and positive to the right looking seaward.
- Published
- 2009
12. Surface current patterns in front of Venice Lagoon
- Author
-
Gacic M.(a), Kovacevic V. (a), Cosoli S. (a), Mazzoldi A. (b), Paduan J.D. (c), Mancero Mosquera I. (a), and Yari S. (a) (d)
- Subjects
Adriatic Sea ,wind-driven currents ,tidal forcing ,surface circulation ,eddies and mesoscale processes - Abstract
Surface patterns of the low-frequency current in a 20 × 30 km region in front of the Venice Lagoon were analysed from a 13-month-long HF radar data set. Surface circulation was related to prevalent wind regimes in the area and to the tidal flow through the lagoon inlet. Three different categories of wind-forcing were defined: bora (NE wind), sirocco (SE wind), and finally the category containing all other wind directions and calms (winds lower than 3 m/sec). Mean flow and vorticity spatial distributions were discussed for different wind conditions. The coastal area about 5 km wide is characterized by a flow field with maximum vorticity. Outside the coastal boundary layer the interior flow is part of the Adriatic basin-wide cyclonic circulation. Two counter-rotating vortices of the dimension of about 45 km were evidenced in the average flow field in front of the lagoon inlet (Malamocco inlet) in all situations except for the bora. The vortex-pair is probably associated with the tidal flow through the inlet. The bora wind induces a strong southward coastal jet detached from the coast by about 5 km homogenizing the flow and eliminating the dipole. The average coastal flow pattern in calm wind conditions was also analysed as a function of the strong inflow/outflow (currents in the inlet > 0.7 m s-1) from the lagoon inlet. In both cases the vorticity pattern is similar, with the negative vorticity to the left of the inlet and positive to the right looking seaward.
- Published
- 2009
13. Can internal processes sustain reversals of the ocean upper circulation? The Ionian Sea example
- Author
-
Gačić, M., primary, Borzelli, G. L. Eusebi, additional, Civitarese, G., additional, Cardin, V., additional, and Yari, S., additional
- Published
- 2010
- Full Text
- View/download PDF
14. On complementary-dual quasi-cyclic codes
- Author
-
Esmaeili, M., primary and Yari, S., additional
- Published
- 2009
- Full Text
- View/download PDF
15. RETRACTED: High level Rifampin Resistance Correlates with Multiple Mutations in the rpoB Gene of Pulmonary Tuberculosis Isolates from the Afghanistan Border of Iran
- Author
-
BAHRMAND, A. R., primary, TITOV, L. P., additional, HADIZADEH TASBITI, A., additional, YARI, S., additional, and GRAVISS, E. A., additional
- Published
- 2009
- Full Text
- View/download PDF
16. Female Genital Mutilation: Medical Complications of a Human Right Violation
- Author
-
Karimi, P., primary, Yari, S., additional, and Loghmani, N., additional
- Published
- 2008
- Full Text
- View/download PDF
17. DCSE: A Dynamic Clustering for Saving Energy in Wireless Sensor Network.
- Author
-
Kiyani, F., Tahmasebirad, H., Chalangari, H., and Yari, S.
- Published
- 2010
- Full Text
- View/download PDF
18. Proper self-complementary codes.
- Author
-
Klove, T. and Yari, S.
- Published
- 2010
- Full Text
- View/download PDF
19. Design and analysis of low torque ripple switched reluctance motor using 3-dimensional finite element method.
- Author
-
Cheshmehbeigi, H.M., Yari, S., and Afjei, E.
- Published
- 2009
- Full Text
- View/download PDF
20. Self-tuning approach to optimization of excitation angles for Switched-Reluctance Motor Drives using fuzzy adaptive controller.
- Author
-
Cheshmehbeigi, H.M., Yari, S., Yari, A.R., and Afjei, E.
- Published
- 2009
21. 48 Advances in multiplexed ion beam imaging (MIBI) for immune profiling of the tumor microenvironment
- Author
-
Yi Zhang, Jason Ptacek, Felipe Geyer, Andre Mignault, James Deeds, Jimmy Giedt, Jane Gu, Margaret McLaughlin, Yari Sigal, Jay Tarolli, Murat Aksoy, Monirath Hav, Rachel Finck, and Jessica Finn
- Subjects
Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2020
- Full Text
- View/download PDF
22. The utility of 99mTc-DMSA and Tc99m-EC scintigraphy for early diagnosis of ifosfamide induced nephrotoxicity.
- Author
-
CAGLAR, M., YARI´S, N., and AKYUZ, C.
- Published
- 2001
- Full Text
- View/download PDF
23. Antimicrobial effect of different calcium hydroxide's preparation methods on root canal microrganisms : an invitro study.
- Author
-
Tabrizizade, M., Yari, S., and Ebrahimi, A.
- Subjects
LIDOCAINE ,CHLORHEXIDINE ,ANALYSIS of variance ,COMBINATION drug therapy ,CULTURE media (Biology) ,DENTAL pulp cavities ,DISINFECTION & disinfectants ,ENTEROCOCCUS ,EXPERIMENTAL design ,HYDROXIDES ,PHYSIOLOGIC salines ,ROOT canal treatment ,STATISTICS ,DATA analysis ,TREATMENT effectiveness ,IN vitro studies ,THERAPEUTICS - Abstract
Background and Aim: Several studies have shown a higher success rate of root canal therapy when the canal is free from bacteria at the time of obturation. In vitro studies have indicated that calcium hydroxide is the most effective antimicrobial intracanal medicaments. The aim of this study was to assess the efficacy of some different calcium hydroxide preparation and a new method. Materials and Methods: For conducting this experimental study, 62 root specimens were used. Segments of root with 5 height and almost 5 mm diameter prepared. The specimens were devided into five groups, according to intracanal medicament used as follows: Calcium hydroxide with Normal saline, Lidocaine 2%, Chlorhexidine %2, Chlorhexidine 0/2%, Iodine Potassium Iodide(IKI) 2%. The medicaments were placed into the canal in creamy consistency, then the specimens were taken in the agar culture plates which contains Entrococcus faecalis. The inhibition zone around each specimen was recorded after 24 hours and result submitted to ANOVA and Tukey’s tests. Result: All calcium hydroxide pastes had some degree of antibacterial activity after 24 hours, but combination of calcium hydroxide with chlorhexidine 2% had significantly more efficacy than the other combinations except lidocaine %2 (P<0.05). Conclusion: Under condition of this study, it can be concluded that addition of chlorhexidine 2% to Calcium hydroxide may improve its antibacterial activity. [ABSTRACT FROM AUTHOR]
- Published
- 2015
24. Toward a Synergistic Optimization of Porous Electrode Formulation and Polysulfide Regulation in Lithium-Sulfur Batteries.
- Author
-
Yari S, Henderick L, Choobar BG, Detavernier C, and Safari M
- Abstract
The use of functional materials is a popular strategy to mitigate the polysulfide-induced accelerated aging of lithium-sulfur (Li-S) batteries. However, deep insights into the role of electrode design and formulation are less elaborated in the available literature. Such information is not easy to unearth from the existing reports on account of the scattered nature of the data and the big dissimilarities among the reported materials, preparation protocols, and cycling conditions. In this study, model functional materials known for their affinity toward polysulfide species, are integrated into the porous sulfur electrodes at different quantities and with various spatial distributions. The electrodes are assembled in 240 lithium-sulfur cells and thoroughly analyzed for their short- and long-term electrochemical performance. Advanced data processing and visualization techniques enable the unraveling of the impact of porous electrodes' formulation and design on self-discharge, sulfur utilization, and capacity loss. The results highlight and quantify the sensitivity of the cell performance to the synergistic interactions of catalyst loading and its spatial positioning with respect to the sulfur particles and carbon-binder domain. The findings of this work pave the road for a holistic optimization of the advanced sulfur electrodes for durable Li-S batteries., (© 2023 Wiley‐VCH GmbH.)
- Published
- 2024
- Full Text
- View/download PDF
25. A potent subset of Mycobacterium tuberculosis glycoproteins as relevant candidates for vaccine and therapeutic target.
- Author
-
Yari S, Afrough P, Yari F, Ghazanfari Jajin M, Fateh A, and Hadizadeh Tasbiti A
- Subjects
- Humans, Glycoproteins metabolism, Mycobacterium tuberculosis, Tuberculosis drug therapy, Tuberculosis prevention & control, Tuberculosis, Multidrug-Resistant, Tuberculosis Vaccines therapeutic use
- Abstract
Tuberculosis (TB) remains one of the most afflictive bacterial infections globally. In high burden TB countries, surveillance, diagnosis and treatment of drug resistant TB (RR and X/MDRTB) display a crucial public health challenge. Therefore, we need new TB vaccines; diagnostic and therapeutic strategies to briskly prevent disease promotion; reduce drug-resistant TB and protect everyone from disease. The study identified various potent membrane and cell wall M. tuberculosis glycolipoproteins that are relevant for diagnostics, drug and vaccine discovery. A M. tuberculosis Proskauer and Beck broth culture was extracted for total proteins by ammonium sulfate method. After ConA-Affinity Chromatography reputed glycoproteins were collected followed by 2DE gel electrophoresis and LC Mass spectrometry. A total of 293 glycoproteins were identified using GlycoPP and IEDB database. Probable conserved trans-membrane protein (Rv0954), LpqN (Rv0583), PPE68 (Rv3873), Phosphate-binding protein (Rv0932c), PPE61 (Rv3532) and LprA (Rv1270c), had the highest glycosylation percentage value with 13.86%, 11.84%, 11.68%, 11.1%, 10.59% and10.2%, respectively. Our study discloses several dominant glycoproteins that play roles in M. tuberculosis survival, and immunogenicity. These include glycoproteins involved in antigenicity, transport and biosynthesis of M. tuberculosis cell envelope, pathogen-host interaction and drug efflux pumps, which are considered as a feasible drug targets or TB new vaccine candidates., (© 2023. The Author(s).)
- Published
- 2023
- Full Text
- View/download PDF
26. Application of Multiple Occupational Health Risk Assessment Models for Crystalline Silica Dust among Stone Carvers.
- Author
-
Rahimimoghadam S, Ganjali A, Khanjani N, Normohammadi M, and Yari S
- Subjects
- United States, Humans, Cross-Sectional Studies, Silicon Dioxide adverse effects, Dust, Risk Assessment, Lung Neoplasms epidemiology, Lung Neoplasms etiology, Silicosis epidemiology, Silicosis etiology
- Abstract
Objective: Silica is the most abundant substance on the Earth's crust and is a proven carcinogen. The aim of this study was to measure the occupational exposure of stone carvers to crystalline silica and to evaluate the health risks. Methods: This descriptive and analytical cross-sectional study was performed on 79 stone carvers. Inhalation air sampling was performed by the NIOSH7500 method and the amount of silica was determined by X-ray diffraction (XRD). Semi-quantitative and quantitative risk assessments were performed using the methods of the Singapore Department and the US Environmental Protection Agency (EPA), respectively. Mortality due to silicosis and lung cancer were estimated using the Manettej and Rice models. Data were analyzed using SPSS23 software., Results: The mean exposure to total inhalable dust and crystalline silica among the stone carvers was 1.44 and 0.5 mg/m3, respectively. Exposure to total dust and silica was significantly higher than the occupational standard (P <0.0001). Stone carvers' exposure to silica was at very high-risk level, and the carcinogenicity of silica considering two cancer slopes was 7.40 × 10-6 and 3.12 × 10-7 and the risk of non-carcinogenicity was unacceptable., Conclusion: The mortality rate due to silicosis was between 3 and 12 people per thousand, and due to lung cancer was 150.24 people per thousand. Based on the results of risk assessment, serious control measures should be implemented in order to reduce workers' exposure to silica.
- Published
- 2023
- Full Text
- View/download PDF
27. Single-cell transcriptomics of human cholesteatoma identifies an activin A-producing osteoclastogenic fibroblast subset inducing bone destruction.
- Author
-
Shimizu K, Kikuta J, Ohta Y, Uchida Y, Miyamoto Y, Morimoto A, Yari S, Sato T, Kamakura T, Oshima K, Imai R, Liu YC, Okuzaki D, Hara T, Motooka D, Emoto N, Inohara H, and Ishii M
- Subjects
- Humans, Mice, Animals, Transcriptome, Activins genetics, Activins metabolism, Follistatin genetics, Follistatin metabolism, Fibroblasts metabolism, Osteogenesis genetics, Cholesteatoma pathology
- Abstract
Cholesteatoma, which potentially results from tympanic membrane retraction, is characterized by intractable local bone erosion and subsequent hearing loss and brain abscess formation. However, the pathophysiological mechanisms underlying bone destruction remain elusive. Here, we performed a single-cell RNA sequencing analysis on human cholesteatoma samples and identify a pathogenic fibroblast subset characterized by abundant expression of inhibin βA. We demonstrate that activin A, a homodimer of inhibin βA, promotes osteoclast differentiation. Furthermore, the deletion of inhibin βA /activin A in these fibroblasts results in decreased osteoclast differentiation in a murine model of cholesteatoma. Moreover, follistatin, an antagonist of activin A, reduces osteoclastogenesis and resultant bone erosion in cholesteatoma. Collectively, these findings indicate that unique activin A-producing fibroblasts present in human cholesteatoma tissues are accountable for bone destruction via the induction of local osteoclastogenesis, suggesting a potential therapeutic target., (© 2023. The Author(s).)
- Published
- 2023
- Full Text
- View/download PDF
28. Biomechanical Comparison of Two Surgical Repair Techniques of the Distal Biceps Tendon.
- Author
-
Yari S, Qawasmi F, Nelson JP, McGrady LM, Grindel SI, and Wang M
- Abstract
Purpose: This study aimed to characterize the relationship between the distal biceps tendon force and the supination and flexion rotations during the initiation phase and to compare the functional efficiency of anatomic versus nonanatomic repairs., Methods: Seven matched pairs of fresh-frozen cadaver arms were dissected to expose the humerus and elbow while preserving the biceps brachii, elbow joint capsule, and distal radioulnar soft tissue complex. For each pair, the distal biceps tendon was severed with a scalpel and then repaired with bone tunnels placed at either the anterior (anatomic) or the posterior (nonanatomic) aspect of the bicipital tuberosity on the proximal radius. A supination test with 90° of elbow flexion and an unconstrained flexion test were conducted on a customized loading frame. The biceps tension was applied incrementally at 200 g per step, whereas the radius rotation was tracked with a 3-dimensional motion analysis system. The tendon force needed to produce a degree of supination or flexion was derived as the regression slope of the tendon force-radial rotation plots. A two-tailed paired t test was performed to compare the difference between the anatomic repair and the nonanatomic repair cadavers., Results: Significantly greater tendon force was required to initiate the first 10° of supination with the elbow in flexion for the nonanatomic group compared with the anatomic group (1.04 ± 0.44 N/degree vs 0.68 ± 0.17 N/degree, P = .02). The average nonanatomic to anatomic ratio was 149% ± 38%. No difference existed between the two groups in the mean tendon force needed to produce the degree of flexion., Conclusions: Our results show that anatomic repair is more efficient in producing supination than nonanatomic repair, but only when the elbow is in 90° of flexion. When the elbow joint is not constrained, the nonanatomic supination efficiency improved, and the difference between the techniques was not significant., Clinical Relevance: The present study added to the body of evidence in comparing anatomic versus nonanatomic repair of the distal biceps tendon and serves as a foundation for future biomechanical and clinical studies in this topic. Given no difference when the elbow joint was not constrained, one could argue that surgeon comfort and preference could guide which technique to use when addressing the distal biceps tendon tears. More studies will be needed to clearly define whether there will be a clinical difference between the two techniques., (© 2023 THE AUTHORS. Published by Elsevier Inc. on behalf of The American Society for Surgery of the Hand.)
- Published
- 2023
- Full Text
- View/download PDF
29. JAK inhibition ameliorates bone destruction by simultaneously targeting mature osteoclasts and their precursors.
- Author
-
Yari S, Kikuta J, Shigyo H, Miyamoto Y, Okuzaki D, Furusawa Y, Minoshima M, Kikuchi K, and Ishii M
- Abstract
Background: Rheumatoid arthritis (RA) is characterized by chronic inflammation and resultant cartilage/bone destruction because of aberrantly activated osteoclasts. Recently, novel treatments with several Janus kinase (JAK) inhibitors have been shown to successfully ameliorate arthritis-related inflammation and bone erosion, although their mechanisms of action for limiting bone destruction remain unclear. Here, we examined the effects of a JAK inhibitor on mature osteoclasts and their precursors by intravital multiphoton imaging., Methods: Inflammatory bone destruction was induced by local injection of lipopolysaccharides into transgenic mice carrying reporters for mature osteoclasts or their precursors. Mice were treated with the JAK inhibitor, ABT-317, which selectively inhibits the activation of JAK1, and then subjected to intravital imaging with multiphoton microscopy. We also used RNA sequencing (RNA-Seq) analysis to investigate the molecular mechanism underlying the effects of the JAK inhibitor on osteoclasts., Results: The JAK inhibitor, ABT-317, suppressed bone resorption by blocking the function of mature osteoclasts and by targeting the migratory behaviors of osteoclast precursors to the bone surface. Further exhaustive RNA-Seq analysis demonstrated that Ccr1 expression on osteoclast precursors was suppressed in the JAK inhibitor-treated mice; the CCR1 antagonist, J-113863, altered the migratory behaviors of osteoclast precursors, which led to the inhibition of bone destruction under inflammatory conditions., Conclusions: This is the first study to determine the pharmacological actions by which a JAK inhibitor blocks bone destruction under inflammatory conditions; this inhibition is beneficial because of its dual effects on both mature osteoclasts and immature osteoclast precursors., (© 2023. The Author(s).)
- Published
- 2023
- Full Text
- View/download PDF
30. Progressive differentiation toward the long-lived plasma cell compartment in the bone marrow.
- Author
-
Koike T, Fujii K, Kometani K, Butler NS, Funakoshi K, Yari S, Kikuta J, Ishii M, Kurosaki T, and Ise W
- Subjects
- Cell Differentiation, Bone Marrow Cells, Germinal Center, Cell Survival, Plasma Cells metabolism, Bone Marrow
- Abstract
The longevity of plasma cells is dependent on their ability to access and reside in so-called niches that are predominantly located in the bone marrow. Here, by employing a traceable method to label recently generated plasma cells, we showed that homeostatic plasma cells in the bone marrow and spleen were continuously replenished by newly generated B220hiMHC-IIhi populations that progressively differentiated into B220loMHC-IIlo long-lived plasma cell (LLPC) populations. We also found that, in the bone marrow, germinal center (GC)-independent and GC-dependent plasma cells decayed similarly upon NP-CGG engagement, and both entered the B220loMHC-IIlo LLPC pool. Compared with NP+B220hiMHC-IIhi plasma cells, NP+B220loMHC-IIlo cells were more immobilized in the bone marrow niches and showed better survival potential. Thus, our results suggest that the adhesion status of bone marrow plasma cells is dynamically altered during their differentiation and is associated with provision of survival signals., (© 2022 Koike et al.)
- Published
- 2023
- Full Text
- View/download PDF
31. Conditioned medium of bone marrow mesenchymal stem cells improves sperm parameters and reduces histological alteration in rat testicular ischaemia/reperfusion model.
- Author
-
Sharifian P, Yari S, Hasanein P, and Manteghi Nezhad Y
- Subjects
- Male, Rats, Animals, Culture Media, Conditioned pharmacology, Semen, Spermatozoa, Testis, Reperfusion, Ischemia pathology, Reperfusion Injury prevention & control, Reperfusion Injury pathology, Mesenchymal Stem Cells
- Abstract
Testis ischaemia-reperfusion (I/R) plays a vital role in male infertility. Recent studies have demonstrated that paracrine factors of mesenchymal stem cells exert the transplanted cells' reparative effects. The present experimental study aimed to investigate the effects of conditioned medium (CM) of bone marrow-derived mesenchymal stem cells (BMMSCs). In this study, 21 rats were separated into three groups of 7 animals: sham, I/R and I/R plus CM. Sperm parameters were measured at the end of this study. Moreover, histological parameters were examined. 2-Deoxyuridine 5-triphosphate nick-end labelling (TUNEL) assay was done to assess the apoptotic cells. The count of adhered neutrophils was measured in subtunical venules. Testicular I/R led to a significant reduction in the viability and concentration of sperm and resulted in a significant elevation in the rate of abnormal sperms in comparison with sham. The CM-treated group demonstrated a significant reduction in the rate of abnormal sperm and a significant elevation in the viability and concentration of sperm compared with the I/R group. Based on the morphometric analysis, in the I/R group, epithelial thickness and seminiferous tubule diameter significantly decreased in comparison with sham. A significant reduction was seen between the I/R and sham groups regarding the mean testicular biopsy score (MTBS) value. However, an improvement was observed in the I/R + CM group MTBS value in comparison with the I/R group. TUNEL assay showed that the apoptotic cells in the seminiferous tubules belonging to the I/R group were significantly higher compared with the control. Nevertheless, apoptotic cells were reduced in the I/R + CM group compared with the I/R group. Results of the present study showed that CM of BMMSCs exerts protective effects on the testicular I/R damages., (© 2022 Wiley-VCH GmbH.)
- Published
- 2022
- Full Text
- View/download PDF
32. Recognition of specific immunogenic antigens with potential diagnostic value in multi-drug resistant Mycobacterium tuberculosis inducing humoral immunity in MDR-TB patients.
- Author
-
Hadizadeh Tasbiti A, Badmasti F, Siadat SD, Fateh A, Yari F, GHzanfari Jajin M, and Yari S
- Subjects
- Antitubercular Agents pharmacology, Antitubercular Agents therapeutic use, Drug Resistance, Multiple, Bacterial, Humans, Immunity, Humoral, Microbial Sensitivity Tests, Sputum microbiology, Mycobacterium tuberculosis, Tuberculosis drug therapy, Tuberculosis, Multidrug-Resistant diagnosis, Tuberculosis, Multidrug-Resistant drug therapy, Tuberculosis, Multidrug-Resistant microbiology
- Abstract
Tuberculosis (TB) as a public health crisis is caused by the intracellular bacterium Mycobacterium tuberculosis. Detection of immunogenic proteins in TB is valuable for the development of diagnostic tests, vaccine formulations and monitoring treatment outcome. In this study, we differentiated the immune-reactivity of proteins in multidrug-resistant tuberculosis (MDRTB) and drug-susceptible strains using purified anti-MDRTB antibodies isolated from inpatients. Our data showed that the anti- MDRTB antibody was well able to detect the MDR strain in the patient's sputum. The immunogenic proteins of MDRTB were purified by affinity chromatography and subjected to matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry. Analysis of the data revealed that seven MDRTB immunogenic proteins, including Rv2986c (HupB), Rv3699, Rv1133c (MetE), Rv0440 (GroEL), Rv3057c, Rv2558 and Rv2971 are involved in DNA stability, metabolism, cellular processes and some unknown functions. Similarities in the electrophoresis protein profiles were evident between the extracts of MDR and sensitive TB strains. However, the protein expression patterns of MDRTB isolates were distinguishable from that formed by susceptible TB strains., (Copyright © 2022. Published by Elsevier B.V.)
- Published
- 2022
- Full Text
- View/download PDF
33. Derivation of hormone-responsive human endometrial organoids and stromal cells from cryopreserved biopsies.
- Author
-
Heidari-Khoei H, Esfandiari F, Moini A, Yari S, Saber M, Ghaffari Novin M, Piryaei A, and Baharvand H
- Subjects
- Biopsy, Cryopreservation, Endometrium, Female, Hormones, Humans, Stromal Cells, Biological Specimen Banks, Organoids
- Abstract
The human endometrium is a dynamic tissue that undergoes cyclic changes in response to sex steroid hormones to provide a receptive status for embryo implantation. Disruptions in this behavior may lead to implantation failure and infertility; therefore, it is essential to develop an appropriate in vitro model to study endometrial changes in response to sex hormones. In this regard, the first choice would be human endometrial cells isolated from biopsies that could be used as monolayer cell sheets or to generate endometrial organoids. However, the need for fresh samples and short-time viability of harvested endometrial biopsy limits these approaches. In order to overcome these limitations, we sought to develop an efficient, simple, robust and reproducible method to cryopreserve human endometrial biopsies that could be stored and/or shipped frozen and later thawed to generate endometrial organoids and endometrial stromal cells (EnSCs). These cryopreserved biopsies could be thawed and used to generate simple endometrial organoids or organoids for co-culture with matched stromal cells that are functionally responsive to sex hormones as similar as the organoids generated from fresh biopsy. An optimal endometrial tissue cryopreservation method would allow the possibility for endometrial tissue biobanking to enable future organoid generation from both healthy tissues and pathological conditions, and open new venues for generate endometrial assembloids, consisting of epithelial organoids and primary stromal cells., (Copyright © 2022. Published by Elsevier Inc.)
- Published
- 2022
- Full Text
- View/download PDF
34. Arthritis-associated osteoclastogenic macrophage, AtoM, as a key player in pathological bone erosion.
- Author
-
Agemura T, Hasegawa T, Yari S, Kikuta J, and Ishii M
- Abstract
Osteoclasts are myeloid lineage cells with a unique bone-destroying ability that maintains bone homeostasis together with bone formation by osteoblasts. An advanced intravital imaging system using a two-photon microscopy has enabled the observation and evaluation of osteoclast dynamics and behaviors in the bone marrow of living mice. Using this system, it has become clear that pathological osteoclasts under inflamed conditions differ from physiological osteoclasts under a steady-state. Recently, we identified novel osteoclast precursors in arthritis, called arthritis-associated osteoclastogenic macrophages (AtoMs), which differentiate into pathological osteoclasts and induce inflammatory bone destruction. In this review, we introduce the in vivo imaging of physiological and pathological osteoclasts and their differentiation mechanism., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
35. Evaluation of protective effects of methylene blue on cisplatin-induced nephrotoxicity.
- Author
-
Usefzay O, Yari S, Amiri P, and Hasanein P
- Subjects
- Animals, Blood Urea Nitrogen, Caspase 3 metabolism, Cisplatin adverse effects, Kidney, Male, Methylene Blue pharmacology, Rats, Kidney Diseases chemically induced, Kidney Diseases drug therapy, Kidney Diseases prevention & control, Renal Insufficiency metabolism
- Abstract
Cisplatin (CP) is used to treat various types of cancer. However, its usage is limited due to nephrotoxicity. This study aims to examine the applicability of methylene blue (MB) against CP-induced kidney injuries. In this study, twenty-eight male rats were divided into four groups. Following administration of a single dose of CP (5 mg/kg), animals received intraperitoneal injections (IP) of MB (4 mg/kg) for seven days. In the final phase of the experiment, serum was collected from rats, with blood urea nitrogen (BUN) and creatinine (Cr) levels measured. Hematoxylin-Eosin (H&E) and Masson's trichrome staining were performed to examine histological changes. Immuno-histological staining was used to evaluate caspase-3 protein expression. The results showed that the MB (4 mg/kg) + CP treated rats underwent a lesser weight loss compared to the CP group (p < 0.05 and p < 0.001, respectively). The kidney weight decreased significantly in the CP + MB group compared to the CP group (p < 0.05 and p < 001, respectively). BUN and Cr levels that were increased significantly in the serum of the CP group (p < 0.001) compared to the control group showed no significant increase in the MB + CP group compared to the control group (p = 0.842 and p = 0.989, respectively). There was a significant decrease in kidney tissue injuries in the CP + MB compared to the CP group (p < 0.001). The glomerular size was recovered in the CP + MB group compared to the CP (p < 0.05). The significant increase in the capsular space of the CP group compared to the control group (p < 0.001) was attenuated in the CP + MB. MB restored the histological alterations in the kidneys. Treatment with 4 mg/kg of MB reduced the expression levels of Caspase-3. In conclusion, this study provides evidence concerning the anti-apoptotic roles of MB in CP-induced kidney damage. In conclusion, MB has a positive impact on kidney function., (Copyright © 2022 The Authors. Published by Elsevier Masson SAS.. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
36. First conjugation directed traverse of gene cassettes harboring α1,3GT from fast-growing Mycobacterium smegmatis mc 2 155 to slow-growing pathogen Mycobacterium tuberculosis H37Rv, presumably opening up new scopes in tuberculosis treatment.
- Author
-
Golichenari B, Yari S, Tasbiti AH, Behravan J, Vaziri F, and Ghazvini K
- Subjects
- Animals, Galactosyltransferases genetics, Mycobacterium smegmatis genetics, Mycobacterium tuberculosis genetics, Mycobacterium tuberculosis metabolism, Tuberculosis
- Abstract
Mycobacterium smegmatis strain mc
2 155 is a fast-growing and non-pathogenic mycobacteria and widely used in genetic studies of mycobacteria. It has been shown that this species of mycobacterium can transfer its genomic DNA fragments to other species of mycobacteria during the conjugation process. Galα1-3Galβ1-4GlcNAc-R (α-gal) glycan epitope is a highly immunogenic epitope exerted by the enzyme α1-3-galactosyltransferase (α1,3GT) in mammalian cells on the glycan skeleton. However, the enzyme is inactive in humans, primates and Old World monkeys as a result of evolutionary mutations. The robust immunogenicity induced by the epitope in human, has attracted much attention to apply the epitope in vaccine research. In this study we proved successful transfer of desired expression cassettes from fast-growing Mycobacterium smegmatis mc2 155, to the slow-growing pathogen Mycobacterium tuberculosis H37Rv. We designed gene cassettes encoding the α1,3GT enzyme under control the potent G13 promoter and the cassette containing hygromycin resistance gene under a Mtb specific promoter, Ptpa in the vector pMV306DIG13 +FflucRT (harboring attP site). The resulting construct was electroporated into mc2 155 strain in combination with pBS-int containing the gene encoding Mycobacteriophage L5 integrase to integrate pMV306DIG13 +FflucRT-cassettes into mc2 155 genome. Following the integration, the recombinant clones were placed in vicinity to the Mycobacterium tuberculosis H37Rv strain to establish conjugation. Conjugated recombinant clones were selected on the medium containing the hygromycin B and transfer of the desired cassettes to Mycobacterium tuberculosis was confirmed. The enzyme α1,3GT in transconjugants were also investigated., (Copyright © 2022 Elsevier Inc. All rights reserved.)- Published
- 2022
- Full Text
- View/download PDF
37. Arthritis-associated osteoclastogenic macrophages (AtoMs) participate in pathological bone erosion in rheumatoid arthritis.
- Author
-
Agemura T, Hasegawa T, Yari S, Kikuta J, and Ishii M
- Subjects
- Animals, Macrophages metabolism, Mice, Osteogenesis, Synovial Membrane, Arthritis, Rheumatoid, Osteoclasts metabolism, Osteoclasts pathology
- Abstract
Rheumatoid arthritis is a chronic form of arthritis that causes bone destruction in joints such as the knees and fingers. Over the past two decades, the clinical outcomes of rheumatoid arthritis have improved substantially with the development of biological agents and Janus kinase inhibitors. Osteoclasts are myeloid lineage cells with a unique bone-destroying ability that can lead to joint destruction. On the other hand, osteoclasts play an important role in skeletal homeostasis by supporting bone remodeling together with osteoblasts in the bone marrow under steady-state conditions. However, the same osteoclasts are considered to participate in physiological bone remodeling and joint destruction. We found that pathological osteoclasts have different differentiation pathways and regulatory transcription factors compared to physiological osteoclasts. We also identified arthritis-associated osteoclastogenic macrophages (AtoMs), which are common progenitors of pathological osteoclasts in mice and humans that develop specifically in inflamed synovial tissue. This review presents details of the newly identified AtoMs and the original intravital imaging systems that can visualize synovial tissue and pathological osteoclasts at the pannus-bone interface.
- Published
- 2022
- Full Text
- View/download PDF
38. Metformin attenuates expression of angiogenic and inflammatory genes in human endometriotic stromal cells.
- Author
-
Yari S, Khoei HH, Saber M, Esfandiari F, Moini A, and Shahhoseini M
- Subjects
- Cell Movement drug effects, Cell Movement physiology, Cell Proliferation drug effects, Cell Proliferation physiology, Cells, Cultured, Endometriosis drug therapy, Endometriosis genetics, Endometrium metabolism, Epithelial Cells drug effects, Epithelial Cells metabolism, Female, Humans, Metformin metabolism, Stromal Cells drug effects, Endometrium drug effects, Metformin pharmacology, Neovascularization, Pathologic metabolism, Stromal Cells metabolism
- Abstract
Endometriosis is a benign gynecological disease that is manifested by the presence and growth of endometrial cells and glands outside the uterine. Active angiogenesis, migration, and invasion of endometrial tissue outside the uterine are critical for the development of endometriosis and lead to the survival and growth of endometriotic lesions. Metformin, as an anti-diabetic agent, represents anti-angiogenic property. Here, we performed a study using human normal endometrial stromal cells (N-ESCs) from healthy endometrial tissue and human eutopic endometrial stromal cells (EU-ESCs) and ectopic endometrial stromal cells (ECT-ESCs) from endometriosis patients. ESCs were cultured and treated with different concentrations of Metformin (0-20 mmol/l) for 72 h to evaluate Metformin effect on cell viability, proliferation, migration was measured by methyl thiazolyl tetrazolium (MTT) assay and scratch test respectively as well as expression of angiogenesis and migration markers. The Metformin reduced cell migration, and proliferation of endometriotic stromal cells in a time and concentration dependently manner. Furthermore, Metformin attenuated the expression of angiogenic and inflammatory genes in human endometriotic stromal cells. The direct anti-proliferative effect on ECT-ESCs combined with the effects of Metformin on inflammatory and angiogenesis-related genes expression supports its therapeutic potential for endometriosis. Metformin could be used as an effective adjuvant in endometriosis treatment., (Copyright © 2021 Elsevier Inc. All rights reserved.)
- Published
- 2021
- Full Text
- View/download PDF
39. Effects of GABAA receptors in nucleus cuneiformis on the cannabinoid antinociception using the formalin test.
- Author
-
Chen J, Hasanein P, Komaki A, and Yari S
- Subjects
- Animals, Bicuculline administration & dosage, Cannabinoids pharmacology, GABA-A Receptor Antagonists pharmacology, Male, Nociception drug effects, Pain drug therapy, Pain Measurement, Rats, Rats, Wistar, Receptors, GABA-A drug effects, gamma-Aminobutyric Acid metabolism, Benzoxazines pharmacology, Bicuculline pharmacology, GABA-A Receptor Agonists pharmacology, Morpholines pharmacology, Muscimol pharmacology, Naphthalenes pharmacology
- Abstract
Rationale: Nucleus cuneiformis (NC), a reticular nucleus of the midbrain, is a part of the descending pain modulatory system and therefore has an important role in pain perception., Objectives: Considering the abundance of GABA
A and cannabinoid receptors in the NC and also the bidirectional roles for GABA in controlling nociception, the present study examined the effects of bilateral intra-NC microinjection of different doses of the GABAA receptor agonist, muscimol, and the GABAA receptor antagonist, bicuculline, on pain modulation using formalin test. We also assessed interaction between canabinergic and GABAergic systems in the NC during this test., Methods: Rats were exposed to intra-NC microinjection of bicuculline (50,100, and 200 ng/side) or muscimol (60, 120, and 240 ng/side) and then subjected to the formalin test. In another set of experiments, the effects of muscimol (60 ng/side) or bicuculline (50 ng/side) administration 5 min before a cannabinoid receptor agonist WIN 55,212-2 (5, 10, and 20 μg/side) microinjection into NC on the formalin test were evaluated., Results: Microinjection of bicuculline and muscimol into the NC decreased and increased pain responses, respectively, in a dose-dependent manner during both phases of the test. Microinjection of WIN 55,212-2 into the NC significantly reduced pain responses in a dose-dependent manner. Microinjection of bicuculline or muscimol in combination with WIN 55,212-2 into the NC respectively potentiated and attenuated WIN 55,212-2-induced antinociception in the formalin test., Conclusions: This study shows that GABA in the NC is involved in pain modulation and suggests the existence of a GABAA -mediated inhibitory system in the NC on pain control. Furthermore, it seems that the antinociceptive effect of WIN 55,212-2 in the formalin test is mediated partly by the activity of local GABAA receptors in the NC.- Published
- 2021
- Full Text
- View/download PDF
40. Comparing mRNA expression and protein abundance in MDR Mycobacterium tuberculosis : Novel protein candidates, Rv0443, Rv0379 and Rv0147 as TB potential diagnostic or therapeutic targets.
- Author
-
Hadizadeh Tasbiti A, Yari S, Siadat SD, Karimipoor M, Badmasti F, Masoumi M, Abdolrahimi F, Khanipour S, Hassanzadeh SM, Ghalami Nobar M, and Yari F
- Abstract
Tuberculosis (TB) is a sizable public health threat in the world. This study was conducted to determine the differential protein composition between susceptible and MDRTB strains. Tuberculosis proteins were extracted by Triton™ X-114 and ammonium sulfate. Two-dimensional gel electrophoresis protein spots were selected for identification by mass spectrometry and mRNA expression levels were measured by real- time PCR. 2DE-Western blot and T cell epitope prediction for identified proteins were made by the IEDB server. The result shows at least six protein spots (Rv0147, Rv3597c, Rv0379, Rv3699, Rv1392 and Rv0443) were differentially expressed in MDRTB isolates. However, difference in mRNA gene expression was not found in the six mRNA genes. 2DE-Western blot procedures indicated strong reaction against MDRTB proteins corresponds to 13, 16 and 55 kDa areas that might be used as new diagnostic tools. In conclusion, these MDRTB proteins identified in this study could be reliable TB diagnostic candidates or therapeutic targets., Competing Interests: The authors declare that they have no conflicts of interest., (© 2021 The Authors. Published by Elsevier B.V.)
- Published
- 2021
- Full Text
- View/download PDF
41. The ameliorative effects of methylene blue on testicular damage induced by cisplatin in rats.
- Author
-
Gholami Jourabi F, Yari S, Amiri P, Heidarianpour A, and Hashemi H
- Subjects
- Animals, Humans, Male, Oxidative Stress, Rats, Rats, Wistar, Sperm Count, Sperm Motility, Spermatozoa metabolism, Testis metabolism, Testosterone metabolism, Cisplatin toxicity, Methylene Blue metabolism, Methylene Blue pharmacology
- Abstract
Cisplatin, a common chemotherapeutic drug, can induce testicular toxicity. Methylene blue, a potent antioxidant, can inhibit the generation of free radicals. This research aimed to study the protective effect of methylene blue against the cisplatin-induced toxicity of the reproductive system in rats. 35 male Wistar rats were divided into five groups: the control group, the cisplatin group (a single dose of 5 mg/kg cisplatin), the low-dose and high-dose methylene blue + cisplatin (2 and 4 mg/kg of methylene blue, respectively, for 7 days) and the methylene blue group (4 mg/kg of methylene blue, for 7 days). The treatments were applied through intraperitoneal injection. Cisplatin treatment reduced the sperm parameters and serum testosterone levels significantly. Methylene blue treatment increased the sperm count (p < .001), viability (p < .001) and motility (p < .001) compared to the cisplatin group. The methylene blue group showed a significant increase in the levels of testosterone compared to the cisplatin group (p < .001) and reverted histopathological changes in cisplatin-treated groups. Immunohistochemical evaluation of the caspase-3 protein revealed that the treatment with methylene blue has significant anti-apoptotic effects on testicular tissue damage. In conclusion, methylene blue can attenuate the cisplatin-induced histological damages and improve the sperm parameters., (© 2020 Wiley-VCH GmbH.)
- Published
- 2021
- Full Text
- View/download PDF
42. Determinants of sleep habits in toddlers: Application of planned behavior theory.
- Author
-
Maree S, Zidi EM, Yari S, and Javadi M
- Subjects
- Child, Preschool, Humans, Infant, Iran, Male, Regression Analysis, Reproducibility of Results, Surveys and Questionnaires, Sleep
- Abstract
Background: Sleep health is a prerequisite for mental and physical health. The family affects the sleeping habits of the child., Objective: The purpose of this study was to investigate the theory of mothers' planned behavior in predicting sleeping habits of toddlers., Methods: The participants of this descriptive-analytical study were 120 mothers of 12- to 36-month-old children living in Razan, Hamadan province, Iran. Data were collected in three stages in order to develop a theory-based tool. Semi-structured qualitative interviews with mothers were conducted to investigate the application of theory in predicting mothers' intention and behavior (n = 25). The face and content validity of the questionnaire was confirmed by a panel of experts. Test-retest method was used to determine the reliability of the questionnaire at 3 weeks interval (n = 25). Validity of Structural Convergence and Divergence with Factor Analysis, Internal Consent with Cronbach's Alpha and predictive validity was determined by multiple regression coefficients (n = 120)., Results: The mean age of the children was 22.8 ± 7.5 months, 55% (66 children) were boys, the mean score of the children's sleep questionnaire was 49 ± 6, and the children's sleep duration was 9 ± 1 hour. Theoretical constructs have a positive and direct correlation with each other and with children's sleep habits, which demonstrates the validity of the theory in predicting toddler sleep habits. Regression analysis showed that perceived behavioral control was the strongest predictor of sleeping habits of toddlers (𝛽 = 0.446) (P = 0.000). The theory of planned behavior can explain 30.5 to 25.7% of the variance of toddler sleep habits., Conclusion: While recommending more comprehensive studies, the findings of the study emphasize the application of the theory of planned behavior in identifying factors influencing sleep habits and designing child sleep improvement interventions.
- Published
- 2021
- Full Text
- View/download PDF
43. Insight into epigenetics of human endometriosis organoids: DNA methylation analysis of HOX genes and their cofactors.
- Author
-
Esfandiari F, Favaedi R, Heidari-Khoei H, Chitsazian F, Yari S, Piryaei A, Ghafari F, Baharvand H, and Shahhoseini M
- Subjects
- Adult, Biopsy, Case-Control Studies, Cells, Cultured, DNA Methylation physiology, Endometriosis pathology, Endometrium metabolism, Endometrium pathology, Epigenesis, Genetic, Epigenomics, Female, Gene Expression Profiling, Humans, Middle Aged, Organoids metabolism, Organoids pathology, Peritoneal Diseases pathology, Primary Cell Culture, Transcription Factors metabolism, Young Adult, Endometriosis genetics, Genes, Homeobox, Peritoneal Diseases genetics, Transcription Factors genetics
- Abstract
Objective: To evaluate and compare the methylation pattern of Human Homeobox (HOX) clusters (A-D) and HOX cofactors in normal, eutopic, and ectopic endometrial tissues with ectopic and eutopic endometriosis organoids as advanced preclinical research models., Design: A chromatin immunoprecipitation (ChIP) array containing 84 genes was used to analyze methylation levels of HOX clusters (A-D) and HOX cofactors in normal, eutopic, and ectopic endometrial biopsy specimens as well as ectopic and eutopic endometriosis organoids., Setting: Reproductive biomedicine and cell science research centers., Patient(s): Nine healthy women without endometriosis (control) and 16 women diagnosed with endometriosis., Intervention(s): Ectopic endometrial lesions were obtained using a laparoscopic procedure, and eutopic and control endometrium biopsy specimens were obtained using pipelle sampling., Main Outcome Measure(s): Methylation levels of HOX clusters (A-D) and HOX cofactors in eutopic and ectopic endometrial biopsy specimens, as well as eutopic and ectopic endometriosis organoids and normal endometrium., Result(s): Most HOX clusters (A-D) and HOX cofactors showed methylation alterations in ectopic/eutopic endometrial tissues and ectopic/eutopic endometriosis organoids compared with normal endometrium. These methylation alterations had the same pattern in ectopic/eutopic tissue biopsy specimens and ectopic/eutopic endometriosis organoids in most genes. A contrariwise methylation pattern was observed in 28 of 84 genes in the ectopic/eutopic tissue biopsy specimens and ectopic/eutopic endometriosis organoids., Conclusion(s): Because a conserved pattern of methylation alterations in endometriosis tissues and organoids was observed for most of the investigated genes (56 of 84), it can be concluded that endometriosis organoids maintain epigenetic changes. Therefore, our study suggests endometriosis organoids as a novel preclinical model to determine the epigenetic mechanisms that underlie endometriosis., (Copyright © 2020 American Society for Reproductive Medicine. Published by Elsevier Inc. All rights reserved.)
- Published
- 2021
- Full Text
- View/download PDF
44. An Acid-Activatable Fluorescence Probe for Imaging Osteocytic Bone Resorption Activity in Deep Bone Cavities.
- Author
-
Hashimoto R, Minoshima M, Kikuta J, Yari S, Bull SD, Ishii M, and Kikuchi K
- Subjects
- Animals, Hydrogen-Ion Concentration, Mice, Mice, Transgenic, Molecular Structure, Bone Resorption diagnosis, Boron Compounds chemistry, Fluorescent Dyes chemistry, Optical Imaging, Osteocytes cytology
- Abstract
A rationally designed pH-activatable fluorescent probe (pHocas-RIS) has been used to measure localised pH levels in osteocytic lacunae in bone tissue. Conjugation of the moderate bone-binding drug risedronate to a pH-activatable BODIPY fluorophore enables the probe to penetrate osteocytic lacunae cavities that are embedded deep within the bone matrix. After injection of pHocas-RIS, any osteocytic lacunae caused by bone-resorbing osteocytes cause the probe to fluoresce in vivo, thus allowing imaging by intravital two-photon excitation microscopy. This pH responsive probe enabled the visualization of the bone mineralizing activities of acid producing osteocytes in real time, thus allowing the study of their central role in remodeling the bone-matrix in healthy and disease states., (© 2020 The Authors. Published by Wiley-VCH GmbH.)
- Published
- 2020
- Full Text
- View/download PDF
45. Changes in Spirometry Indices and Lung Cancer Mortality Risk Estimation in Concrete Workers Exposed io Crystalline Silica.
- Author
-
Rahimi Moghadam S, Khanjani N, Mohamadyan M, Emkani M, Yari S, Layegh Tizabi MN, and Ganjali A
- Subjects
- Adult, Cross-Sectional Studies, Follow-Up Studies, Humans, Inhalation Exposure adverse effects, Iran, Lung Neoplasms epidemiology, Lung Neoplasms etiology, Lung Neoplasms pathology, Male, Occupational Diseases epidemiology, Occupational Diseases etiology, Occupational Diseases pathology, Occupational Exposure adverse effects, Prognosis, Survival Rate, Air Pollutants, Occupational adverse effects, Construction Materials adverse effects, Lung Neoplasms mortality, Occupational Diseases mortality, Risk Assessment methods, Silicon Dioxide adverse effects, Spirometry methods
- Abstract
The health of workers in the concrete and cement industries can be at risk due to occupational exposure to silica dust. The purpose of this study was to evaluate the changes of pulmonary parameters and risk of mortality from lung cancer in concrete workers exposed to crystalline silica. This cross-sectional study was performed on 72 male workers exposed to silica at a concrete manufacturing plant in Neyshabur, Iran. Respiratory zone air sampling was performed using the standard NIOSH7602 method using individual sampling pumps and membrane filters. Then, the amount of silica in the samples was determined using the Fourier Transform Infrared technique. The risk of death from lung cancer was determined using Rice et al.'s model. Respiratory indices were measured using a spirometer. Data were analyzed by the SPSS 20 software. Occupational exposure to silica was 0.025 mg/m3 and mortality was estimated to be 7-94 per thousand. All spirometry indices significantly decreased during these 4 years of exposure to silica dust. The respiratory pattern of 22% of the exposed workers was obstructive and this prevalence was significantly higher than the control group. The results showed that although the average occupational exposure to silica in these concrete workers was below the recommended threshold of national and international organizations, their risk of death was significantly higher; and workers' lung indices had significantly decreased over four years. Therefore, appropriate measures should be taken to reduce silica exposure among these workers.
- Published
- 2020
- Full Text
- View/download PDF
46. Predicting Inpatient Length of Stay in Iranian Hospital: Conceptualization and Validation.
- Author
-
Khosravizadeh O, Vatankhah S, Jahanpour M, Yousefzadeh N, Shahsavari S, and Yari S
- Subjects
- Adult, Female, Humans, Male, Reproducibility of Results, Surveys and Questionnaires, Concept Formation, Delivery of Health Care standards, Hospitals standards, Inpatients statistics & numerical data, Length of Stay economics, Length of Stay statistics & numerical data
- Abstract
Objective: The length of stay is an important indicator of hospital performance and efficiency. Regarding the importance of the length of stay, this study aimed to design a structural model of the inpatients' length of stay in the educational and therapeutic health care facilities of Iran in order to identify the influencing dimensions., Methods: The present study was an analytical and applied study. The face validity of the data gathering tool was investigated by the expert judgment and the construct validity was examined by using the exploratory factor analysis. In order to verify the reliability of the tool, the internal consistency was also trialed by using the Cronbach's alpha. For ranking the influencing dimensions and factors and also in order to examine the causal relationships between the variables in a coherent manner and presenting the final model, the structural equation modeling technique was used in AMOS software at a significant level of 0.05., Results: The mentioned structural model consists of 4 dimensions and 29 factors influencing the length of stay of hospitalized patients. The independent variables are based on priority and importance as follows: patients' conditions, the underlying factors, the clinical staff performance, and hospitals' service delivery, which were examined by second-order factor analysis in order to study the relationship between them and the inpatients' length of stay., Conclusion: Considering the importance of each one of the proposed dimensions from the point of view of service providers in some therapeutic centers of the country by paying attention to the role of each one of them in preventing prolonged hospitalization can be essential in the effectiveness of the treatment and cost reduction., .
- Published
- 2020
- Full Text
- View/download PDF
47. The Effects of Embryonic Cerebrospinal Fluid on The Viability and Neuronal Differentiation of Adipose Tissue-Derived Stem Cells in Wistar Rats.
- Author
-
Mohammadi-Mahdiabadi-Hasani MH, Nabiuni M, Parivar K, Yari S, Sahebi AR, and Miyan J
- Abstract
Objective: The embryonic cerebrospinal fluid (e-CSF) contains various growth factors and morphogens. Recent studies showed that e-CSF plays significant roles in embryonic brain development. Adipose tissue-derived stem cells (ADSCs) have a mesodermal origin that can be differentiated into mesodermal and ectodermal lineages. This study aimed to evaluate the effects of e-CSF on the proliferation, viability, and neural differentiation of ADSCs in rats., Materials and Methods: In this experimental study, adipose tissue was dissected out from the inguinal region of adult male rats. Then, ADSCs were isolated by enzymatic digestion from adipose tissues and mesenchymal cells were confirmed using the flow cytometry analysis that measured the cell surface markers including CD90, CD44, CD73, CD105, CD34, CD45, and CD11b. The multi-potential characteristics of ADSCs were assessed by osteogenic and adipogenic potentials of these cells. Under suitable in vitro conditions, ADSCs were cultured in DMEM supplemented with and without additional 10% e-CSF. These fluids were collected from Wistar rats at the E17, E18, and E19 gestational ages. Cellular proliferation and viability were determined using the MTT assay. Immunocytochemistry was used to study the expression of β-III tubulin in ADSCs. The neurite outgrowth of cultured cells was assessed using the ImageJ software., Result: The results of the present study demonstrated that the viability of ADSCs in cell culture conditioned with E17 and E18 e-CSF were significantly increased in comparison with controls. Cultured cells treated with e-CSF from E18 and E19 established neuronal-like cells bearing long process, whereas no process was observed in the control groups or cultured cells treated with E17 e-CSF., Conclusion: This study showed that e-CSF has the ability to induce neuronal differentiation and viability in ADSCs. Our data support a significant role of e-CSF as a therapeutic strategy for the treatment of neurodegenerative diseases., Competing Interests: There is no conflict of interest in this study., (Copyright© by Royan Institute. All rights reserved.)
- Published
- 2020
- Full Text
- View/download PDF
48. Immuno-proteomics analysis between OMV of vaccine and dominant wild type strains of Bordetella pertussis in Iran.
- Author
-
Badamchi A, Bahrami F, Tasbiti AH, Yari S, Shafiei M, Shahcheraghi F, and Siadat SD
- Abstract
Background and Objectives: Despite widespread vaccination programs against pertussis, there has been a worldwide resurgence of the disease in recent years. We aimed to investigate protein composition of outer membrane vesicles (OMV) of Bordetella pertussis (Bp) and to evaluate the immunogenicity of OMV antigens both in the vaccine and the dominant wild type strains in Iran., Materials and Methods: The OMV were purified from both vaccine and wild type strains. The immunoreactivity of the OMVs was investigated by exposing sera taken from the patients and the vaccinated infants. The protein profiles of OMVs were compared using two-dimensional electrophoresis. The LC-MS/MS was used to analyse and identify differentially expressed protein spots., Results: The two type strains showed differences in their 2D gel protein profile. Further analysis of selected proteins from the dominant Iranian strains using LC-MS/MS demonstrated that the identified proteins fell into different functional categories including (i) metabolism, (ii) membrane transport and secretion system, (iii) biosynthesis and degradation, (iv) adaption, adhesion, pathogenicity, conserved hypothetical and protection responses. Moreover, a number of immunogenic proteins were identified including Bp 2434 (serine protease) and Bp 1616 (putative DNA binding protein) from the vaccine and the wild type strains, respectively which could be considered as potential antigens for an OMV vaccine., Conclusion: OMV Bp could be considered as an alternative vaccine against pertussis, containing the bacterium's protein antigens that can confer equal efficacy compared to a whole bacterial cell vaccine with advantages such as less side effects and lower costs than acellular pertussis vaccines., (Copyright© 2020 Iranian Neuroscience Society.)
- Published
- 2020
49. Front-line staff's perspective on patient safety culture in Iranian medical centers: A systematic review and meta-analysis.
- Author
-
Khosravizadeh O, Mohseni M, Baghian N, Maleki A, Hashtroodi A, and Yari S
- Subjects
- Humans, Iran, Patient Safety, Surveys and Questionnaires, Organizational Culture, Safety Management
- Abstract
Background: The prerequisite for promoting safety culture is to assess the existing safety culture level of institutes, because safety precautions without appropriate evaluation increase costs and unforeseen risks., Objective: This study aimed to systematically review the status of patient safety culture from the perspective of clinical personnel at Iranian hospitals through a meta-analysis of studies using the Hospital Survey on Patient Safety Culture (HSOPSC) questionnaire., Methods: The present systematic review and meta-analysis was conducted in 2018. Data were gathered by searching Google Scholar, Scopus, PubMed, and Web of Science databases up to November 2018. Search keywords were "patient", "safety", "culture", "healthcare", "hospital", "medical center", "HSOPSC tool", and "Iran". The search protocol was limited to 10 years. To estimate the PSC score, computer software CMA:2 (Comprehensive Meta-Analysis) was used. The presence of heterogeneity across the studies was assessed with the I2 statistic. A forest plot was used to report the results. Publication bias was assessed through a funnel plot., Results: The meta-analysis of studies showed that the PSC score based on the random effect model was 52.7% (95% CI: 50.2%-55.2%), (Q = 522.3, df = 54, P < 0.05, I2 = 89.6). A mean of 12 dimensions of HSOPSC showed that the "Teamwork within units" dimension had the highest PSC score (67.2%) and "Non-punitive response to error" had the lowest score (40.4%)., Conclusions: Managers and policymakers should be directed towards non-punitive responses to errors and persuade staff to report errors and execute the approach to learn from mistakes. Also, a periodic government evaluation of the patient safety culture will help further its sustainable development.
- Published
- 2020
- Full Text
- View/download PDF
50. Effect of Occupational Exposure to Radar Radiation on Cancer Risk: A Systematic Review and Meta-Analysis.
- Author
-
Safari Variani A, Saboori S, Shahsavari S, Yari S, and Zaroushani V
- Subjects
- Humans, Prognosis, Risk Factors, Early Detection of Cancer, Neoplasms, Radiation-Induced diagnosis, Neoplasms, Radiation-Induced etiology, Occupational Exposure adverse effects, Radar statistics & numerical data
- Abstract
Objective: Microwave radiation is one of the most growing environmental workplace factors that exposes too many workers in the various workplaces. Regard to concerns about cancer incidence in these workers and lack of systematic or meta-analytic studies about this object, so, we conducted a meta-analysis to acquire an understanding of the association between cancer risk and occupational exposure to radar radiation., Methods: A systematic search was carried out on case-control, cohort and clinical control trial studies that published in the Cochrane Library, PubMed, ISI Web of Science, Scopus and Google scholar databases that accomplished from March 2017 to March 2018 and updated on 30 September, 2018 in English and Persian articles without time limit in publication date. Keywords were selected based on PICO principle and collected from MeSH database. After removal of duplicated studied, taking into inclusion and exclusion criteria, the process of screening was carried out and data were extracted after preparation of the full text of included articles. Article collection was completed by manually searching for a reference list of eligible studies. For quality assessment of included studies, Newcastle-Ottawa scale was used., Results: a total of 533 studies was found in the first step of literature search, only 6 were included with 53,008 sample size according to inclusion and exclusion criteria. Estimated pooled random effects size analysis showed no significant increasing effect of occupational exposure to radar radiation on mortality rate (MR=0.81, 95%CI: 0.78, 0.83) and relative risk (RR=0.87, 95%CI: 0.75, 0.99, P <0.0001) of cancer with a significant heterogeneity between the selected studies., Conclusions: In conclusion, the results of this meta-analysis study have shown no significant increase in overall mortality ratio and cancer risk ratio from occupational exposure to the radar frequency of workers. But, these results are not conclusive. As regards to some limitation such as fewer numbers of included studies, lack of data about exposure characterizations and demographic characterizations in this meta-analysis, this result is not certain and conclusive. It is recommended to conduct future studies.
- Published
- 2019
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.