33 results on '"Yaqi Tang"'
Search Results
2. An in vivo avian model of human melanoma to perform rapid and robust preclinical studies
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Loraine Jarrosson, Stéphane Dalle, Clélia Costechareyre, Yaqi Tang, Maxime Grimont, Maud Plaschka, Marjorie Lacourrège, Romain Teinturier, Myrtille Le Bouar, Delphine Maucort‐Boulch, Anaïs Eberhardt, Valérie Castellani, Julie Caramel, and Céline Delloye‐Bourgeois
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avian model ,melanoma ,patient‐Derived Xenografts ,preclinical oncology ,targeted therapies ,Medicine (General) ,R5-920 ,Genetics ,QH426-470 - Abstract
Abstract Metastatic melanoma patients carrying a BRAFV600 mutation can be treated with a combination of BRAF and MEK inhibitors (BRAFi/MEKi), but innate and acquired resistance invariably occurs. Predicting patient response to targeted therapies is crucial to guide clinical decision. We describe here the development of a highly efficient patient‐derived xenograft model adapted to patient melanoma biopsies, using the avian embryo as a host (AVI‐PDXTM). In this in vivo paradigm, we depict a fast and reproducible tumor engraftment of patient samples within the embryonic skin, preserving key molecular and phenotypic features. We show that sensitivity and resistance to BRAFi/MEKi can be reliably modeled in these AVI‐PDXTM, as well as synergies with other drugs. We further provide proof‐of‐concept that the AVI‐PDXTM models the diversity of responses of melanoma patients to BRAFi/MEKi, within days, hence positioning it as a valuable tool for the design of personalized medicine assays and for the evaluation of novel combination strategies.
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- 2023
- Full Text
- View/download PDF
3. The change in pediatric subject symptoms during the COVID-19 pandemic in China: an increase in cardiac consultation
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Yaqi Tang, Shujing Ma, Gang Luo, Zhixian Ji, Shuiyan Zhao, Yue Cao, and Silin Pan
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COVID-19 ,Chest pain ,Palpitation ,Pediatrics ,Etiology ,Incidence ,RJ1-570 - Abstract
Abstract Background It is reported that the adverse impact of nonpharmaceutical interventions (NPIs) on the mental health of children and adolescents may lead to psychologically related disorders during the coronavirus disease 2019 (COVID-19) period. Subject symptoms such as chest pain, chest tightness, and palpitation may be related to increased stress and anxiety in children and adolescents. The present research aimed to determine the number of pediatric consults and etiology of subject symptoms during the COVID-19 pandemic period and compared it with the same timelines in 2019 and 2021 to discuss the impact of different periods on the organic disease onset of children with subject symptoms, especially in cardiac involvement. Methods Children who visited Qingdao Women and Children’s Hospital, Qingdao University between January 23 to April 30, 2019 (pre-COVID-19 period), January 23 to April 30, 2020 (COVID-19 period), and January 23 to April 30, 2021 (post-COVID-19 period) presenting chest pain, chest tightness, and palpitation were recruited. Information to determine gender, age, medical history, department for the initial visit, clinical manifestations, time from the latest onset to the visit, and diagnosis were recorded. Result A total of 891 patients were enrolled in the present study (514 males; median age: 7.72). One hundred twenty-three patients presented during the pre-COVID-19 period while 130 during the COVID-19 period, nevertheless, the number substantially increased during the post-COVID-19 period (n = 638). Cardiac etiology accounted for 1.68% (n = 15) of the patient population, including arrhythmias (n = 10, 1.12%), myocarditis (n = 4, 0.44%), and atrial septal defect (n = 1, 0.11%). There was no significant difference among groups in the distribution of organic etiology. The median time from the latest onset to the visit during the pre-COVID-19 period was 7 days compared to 10 days during the COVID-19 period and 3 days during the post-COVID period. Conclusion During the post-COVID-19 period, the median time from the latest onset to the visit was significantly shorter than that in the pre-COVID-19 period or COVID-19 period. The pediatric consult of children with subject symptoms presented increased substantially during the post-COVID-19 period, while there was no significant difference in the number of patients involving the cardiac disease. Clinicians ought to be more careful to screen heart diseases to prevent missed diagnosis and misdiagnosis during special periods.
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- 2022
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4. A small-diameter vascular graft immobilized peptides for capturing endothelial colony-forming cells
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Yaqi Tang, Lu Yin, Shuai Gao, Xiaojing Long, Zhanhui Du, Yingchao Zhou, Shuiyan Zhao, Yue Cao, and Silin Pan
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rapid endothelialization ,peptide immobilization ,in situ differentiation ,SDVDs ,endothelial colony-forming cells ,Biotechnology ,TP248.13-248.65 - Abstract
Combining synthetic polymers and biomacromolecules prevents the occurrence of thrombogenicity and intimal hyperplasia in small-diameter vascular grafts (SDVGs). In the present study, an electrospinning poly (L)-lactic acid (PLLA) bilayered scaffold is developed to prevent thrombosis after implantation by promoting the capture and differentiation of endothelial colony-forming cells (ECFCs). The scaffold consists of an outer PLLA scaffold and an inner porous PLLA biomimetic membrane combined with heparin (Hep), peptide Gly-Gly-Gly-Arg-Glu-Asp-Val (GGG-REDV), and vascular endothelial growth factor (VEGF). Attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy, X-ray photoelectron spectroscopy (XPS), and contact angle goniometry were performed to determine successful synthesis. The tensile strength of the outer layer was obtained using the recorded stress/strain curves, and hemocompatibility was evaluated using the blood clotting test. The proliferation, function, and differentiation properties of ECFCs were measured on various surfaces. Scanning electronic microscopy (SEM) was used to observe the morphology of ECFCs on the surface. The outer layer of scaffolds exhibited a similar strain and stress performance as the human saphenous vein via the tensile experiment. The contact angle decreased continuously until it reached 56° after REDV/VEGF modification, and SEM images of platelet adhesion showed a better hemocompatibility surface after modification. The ECFCs were captured using the REDV + VEGF + surface successfully under flow conditions. The expression of mature ECs was constantly increased with the culture of ECFCs on REDV + VEGF + surfaces. SEM images showed that the ECFCs captured by the REDV + VEGF + surface formed capillary-like structures after 4 weeks of culture. The SDVGs modified by REDV combined with VEGF promoted ECFC capture and rapid differentiation into ECs, forming capillary-like structures in vitro. The bilayered SDVGs could be used as vascular devices that achieved a high patency rate and rapid re-endothelialization.
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- 2023
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5. Dispersion Turning Attenuation Microfiber for Flowrate Sensing
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Yaqi Tang, Chao Wang, Xuefeng Wang, Meng Jiang, Junda Lao, and Dongning Wang
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dispersion turning point ,high attenuation fiber ,anemometer ,optical fiber sensor ,Chemical technology ,TP1-1185 - Abstract
We demonstrated a new optical fiber modal interferometer (MI) for airflow sensing; the novelty of the proposed structure is that an MI is fabricated based on a piece of HAF, which makes the sensitive MI itself also a hotwire. The interferometer is made by applying arc-discharge tapering and then flame tapering on a 10 mm length high attenuation fiber (HAF, 2 dB/cm) with both ends spliced to a normal single mode fiber. When the diameter of the fiber in the processing region is reduced to about 2 μm, the near-infrared dispersion turning point (DTP) can be observed in the interferometer’s transmission spectrum. Due to the absorption of the HAF, the interferometer will have a large temperature increase under the action of a pump laser. At the same time, the spectrum of the interferometer with a DTP is very sensitive to the change in ambient temperature. Since airflow will significantly affect the temperature around the fiber, this thermosensitive interferometer with an integrated heat source is suitable for airflow sensing. Such an airflow sensor sample with a 31.2 mm length was made and pumped by a 980 nm laser with power up to 200 mW. In the comparative experiment with an electrical anemometer, this sensor exhibits a very high air-flow sensitivity of −2.69 nm/(m/s) at a flowrate of about 1.0 m/s. The sensitivity can be further improved by enlarging the waist length, increasing the pump power, etc. The optical anemometer with an extremely high sensitivity and a compact size has the potential to measure a low flowrate in constrained microfluidic channels.
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- 2023
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6. A central circadian oscillator confers defense heterosis in hybrids without growth vigor costs
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Li Yang, Pengtao Liu, Xuncheng Wang, Aolin Jia, Diqiu Ren, Yaru Tang, Yaqi Tang, Xing Wang Deng, and Guangming He
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Science - Abstract
There is frequently a trade-off between plant immunity and growth. Here the authors show that the epigenetic control of CCA1, encoding a core component of the circadian oscillator, simultaneously promotes heterosis for both defense and growth in hybrids under pathogen invasion.
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- 2021
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7. Liquid Pressure Sensor Based on Fiber Bragg Grating with an Adjustable Structure
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Junda Lao, Chao Wang, Yaqi Tang, Pengfei Zheng, Liuwei Wan, Chi Chiu Chan, and Shuangchen Ruan
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adjustable ,FBG ,liquid pressure ,PDMS ,Chemical technology ,TP1-1185 - Abstract
In this paper, a fiber-optic liquid pressure sensor is designed and developed by encapsulating the fiber Bragg grating (FBG) inside the adjustable double-flange cylinder rigid structure with flexible polymer polydimethylsiloxane (PDMS). Within the elastic deformation range of the PDMS, the proposed adjustable FBG-based liquid pressure sensor is proven to change its measuring range while maintaining high measurement sensitivity by simply adjusting the structure, that is, the sensor can achieve high measurement sensitivity in various liquid levels. In addition, the simulation and experimental results show that the sensor sensitivity can be enhanced by the proper changes of the structural parameters, such as the inner diameter, etc. The proposed sensor has shown that it has good linearity and stability, which provides a new opportunity for the monitoring of liquid pressure in oceans, dams and other environments.
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- 2022
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8. Genome-wide association study (GWAS) of ovarian cancer in Japanese predicted regulatory variants in 22q13.1.
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Varalee Yodsurang, Yaqi Tang, Yukie Takahashi, Chizu Tanikawa, Yoichiro Kamatani, Atsushi Takahashi, Yukihide Momozawa, Nobuo Fuse, Junichi Sugawara, Atsushi Shimizu, Akimune Fukushima, Asahi Hishida, Norihiro Furusyo, Mariko Naito, Kenji Wakai, Taiki Yamaji, Norie Sawada, Motoki Iwasaki, Shoichiro Tsugane, Makoto Hirata, Yoshinori Murakami, Michiaki Kubo, and Koichi Matsuda
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Medicine ,Science - Abstract
Genome-wide association studies (GWAS) have identified greater than 30 variants associated with ovarian cancer, but most of these variants were investigated in European populations. Here, we integrated GWAS and subsequent functional analyses to identify the genetic variants with potential regulatory effects. We conducted GWAS for ovarian cancer using 681 Japanese cases and 17,492 controls and found that rs137672 on 22q13.1 exhibited a strong association with a P-value of 1.05 × 10(-7) and an odds ratio of 0.573 with a 95% confidence interval of 0.466-0.703. In addition, three previously reported SNPs, i.e., rs10088218, rs9870207 and rs1400482, were validated in the Japanese population (P < 0.05) with the same risk allele as noted in previous studies. Functional studies including regulatory feature analysis and electrophoretic mobility shift assay (EMSA) revealed two regulatory SNPs in 22q13.1, rs2072872 and rs6509, that affect the binding affinity to some nuclear proteins in ovarian cancer cells. The plausible regulatory proteins whose motifs could be affected by the allele changes of these two SNPs were also proposed. Moreover, the protective G allele of rs6509 was associated with a decreased SYNGR1 expression level in normal ovarian tissues. Our findings elucidated the regulatory variants in 22q13.1 that are associated with ovarian cancer risk.
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- 2018
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9. Highly Sensitive Physiological Sensor Based on Tapered Fiber-Optic Interferometer for Sweat pH Detection
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Yisong Lei, Zidan Gong, Yuyao Li, Jie Zhang, Zhao Liu, Zeji Sun, Xia Ouyang, Yaqi Tang, and Chi Chiu Chan
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Electrical and Electronic Engineering ,Instrumentation - Published
- 2023
10. Ribosomal protein L22‐like1 promotes prostate cancer progression by activating PI3K/Akt/mTOR signalling pathway
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Xiaoyu Yi, Chao Zhang, Baojie Liu, Guojun Gao, Yaqi Tang, Yongzheng Lu, Zhifang Pan, Guohui Wang, and Weiguo Feng
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Molecular Medicine ,Cell Biology - Published
- 2023
11. Adoptive macrophages reverse the immunosuppressive microenvironment in glioblastoma via programmed phenotypic polarization
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Yang Fan, Hang Yin, Bolin Yao, Jing Zhao, Guangli Cheng, Yaqi Tang, Luo Chen, Jian Chen, Ji Zhou, Cong Wang, Ren Li, Botao Zhao, Xiao-Yong Zhang, Xihui Gao, and Cong Li
- Abstract
Tumour-associated macrophages (TAMs) are abundant in glioblastoma (GBM) and play important roles in maintaining the suppressive tumour immune microenvironment (TIME). Strategies have been tried to deplete or transform the TAMs, but they face challenges to fundamentally reshape the TIME. Here, we report adoptively transferred macrophages as a new strategy to repolarize TAMs, modulate TIME and suppress GBM growth. We reveal adoptive macrophages primed to anti-inflammatory phenotype exhibit higher efficacy in traversing tumour vasculature and homing into GBM than those with pro-inflammatory phenotypes. Engineered anti-inflammatory macrophages, eM2-Mφs, are developed and show a unique characteristic of programmed phenotype repolarization. The adoptively transferred eM2-Mφs home to GBM efficiently post intravenous administration and their spontaneous transition into proinflammatory phenotype triggers reprogramming of endogenous TAMs. Moreover, low-dose irradiation (LDI) markedly enhances TAM infiltration and synergizes with adoptive eM2-Mφs to reverse the suppressive TIME. Combined treatment with LDI and eM2-Mφs followed by checkpoint inhibitor remarkably extends the survival of mouse models bearing intracranial GBM allografts. Collectively, this study provides an adoptive non-genetic engineered macrophage therapy to enhance immunotherapeutic response to GBM.
- Published
- 2023
12. Prediction of Coronary Artery Lesions in Children with Kawasaki Syndrome Based on Machine Learning
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Yaqi Tang, Zhanhui Du, Zheqi Wang, Yuhai Liu, and Silin Pan
- Abstract
Objective The most serious complication of Kawasaki syndrome (KS) is coronary artery lesions (CAL). About 20%-25% of KS will develop into severe CAL without intervention. Machine learning (ML) is a branch of artificial intelligence (AI), which integrates complex data sets on a large scale and uses huge data to predict future events. Besides, computers can reveal new relationships that doctors may not easy to find. The present study presented a model to predict the risk of CAL in KS children by different algorithms to achieve the early diagnosis of CAL. Methods A total of 158 children were enrolled from Women and Children’s Hospital, Qingdao University and divided into 7 to 3 as the training sets and the test sets for modeling and validation studies. The clinical manifestations and auxiliary examinations were collected as input features in our models based on the latest 6th edition diagnostic guidelines. Prior to applying the algorithm to modeling, the principal component analysis (PCA) was used to achieve dimension reduction for eliminating the high correlation between features and the Synthetic Minority Oversampling Technique (SMOTE) for promoting accuracy. There are several classifiers are constructed for models including the Random Forest (RF), the Logical regression (LG), and the eXtreme Gradient Boosting (XGBoost). Results The sensitivity and specificity of RF were 0.8 and 0.906, and the area under the curve (AUC) was 0.972. For LG, the sensitivity and specificity were 0.6 and 0.976. The XGBoost were 0.2 and 0.953, respectively. Conclusion Models are established through three different algorithms to achieve the best sensitivity and specificity. The RF was superior to other methods, which provides a reference for the prevention of CAL.
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- 2023
13. Microcystin‑leucine arginine promotes colorectal cancer cell proliferation by activating the PI3K/Akt/Wnt/β‑catenin pathway
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Yaqi, Tang, Xiaoyu, Yi, Xinyu, Zhang, Baojie, Liu, Yongzheng, Lu, Zhifang, Pan, Tao, Yu, and Weiguo, Feng
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Cancer Research ,Microcystins ,Receptor Protein-Tyrosine Kinases ,General Medicine ,Arginine ,Sincalide ,Phosphatidylinositol 3-Kinases ,Oncology ,Leucine ,Humans ,Colorectal Neoplasms ,Proto-Oncogene Proteins c-akt ,beta Catenin ,Cell Proliferation - Abstract
Microcystin‑leucine arginine (MC‑LR) is an environmental toxin produced by cyanobacteria and is considered to be a potent carcinogen. However, to the best of our knowledge, the effect of MC‑LR on colorectal cancer (CRC) cell proliferation has never been studied. The aim of the present study was to investigate the effect of MC‑LR on CRC cell proliferation and the underlying mechanisms. Firstly, a Cell Counting Kit‑8 (CCK‑8) assay was conducted to determine cell viability at different concentrations, and 50 nM MC‑LR was chosen for further study. Subsequently, a longer CCK‑8 assay and a cell colony formation assay showed that MC‑LR promoted SW620 and HT29 cell proliferation. Furthermore, western blotting analysis showed that MC‑LR significantly upregulated protein expression of PI3K, p‑Akt (Ser473), p‑GSK3β (Ser9), β‑catenin, c‑myc and cyclin D1, suggesting that MC‑LR activated the PI3K/Akt and Wnt/β‑catenin pathways in SW620 and HT29 cells. Finally, the pathway inhibitors LY294002 and ICG001 were used to validate the role of the PI3K/Akt and Wnt/β‑catenin pathways in MC‑LR‑accelerated cell proliferation. The results revealed that MC‑LR activated Wnt/β‑catenin through the PI3K/Akt pathway to promote cell proliferation. Taken together, these data showed that MC‑LR promoted CRC cell proliferation by activating the PI3K/Akt/Wnt/β‑catenin pathway. The present study provided a novel insight into the toxicological mechanism of MC‑LR.
- Published
- 2022
14. Ultra-Sensitive All-Optical Anemometer Based on Dispersion Turning Point
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Yaqi Tang, Chao Wang, Junda Lao, Pengfei Zhang, and Chi Chiu Chan
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- 2022
15. Anin vivoavian model of human melanoma to perform rapid and robust preclinical studies
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Loraine Jarrosson, Stéphane Dalle, Clélia Costechareyre, Yaqi Tang, Maxime Grimont, Maud Plaschka, Marjorie Lacourrège, Romain Teinturier, Myrtille Le Bouar, Delphine Maucort-Boulch, Anaïs Eberhardt, Valérie Castellani, Julie Caramel, and Céline Delloye-Bourgeois
- Abstract
Metastatic melanoma patients carrying a BRAFV600mutation can be treated with BRAF inhibitors (BRAFi), in combination with MEK inhibitors (MEKi), but innate and acquired resistance invariably occurs. Resistance can involve transcriptional- and epigenetic-based phenotypic adaptations, as yet unpredictable. Predicting patient response to targeted therapies is crucial to guide clinical decision. We describe here the development of a highly efficient patient-derived xenograft model adapted to patient melanoma biopsies, using the avian embryo as a host (AVI-PDX™). In thisin vivoparadigm, we depict a fast and reproducible tumor engraftment of patient samples within the embryonic skin, preserving key molecular and phenotypic features. We show that sensitivity and resistance to BRAFi/MEKi targeted therapies can be reliably modeled in these AVI-PDX™, as well as synergies with other drugs, such as HDACi. We further provide proof-of-concept that the AVI-PDX™models the diversity of responses of melanoma patients to BRAFi/MEKi, within days, hence positioning it as a valuable tool for the design of personalized medicine assays and for the evaluation of novel combination strategies.
- Published
- 2022
16. The change in pediatric subject symptoms during the COVID-19 pandemic in China
- Author
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Yaqi Tang, Shujing Ma, Gang Luo, Zhixian Ji, Shuiyan Zhao, Yue Cao, and Silin Pan
- Abstract
Background: It is reported that the adverse impact of nonpharmaceutical interventions (NPIs) on the mental health of children and adolescents may lead to psychologically related disorders during the coronavirus disease 2019 (COVID-19) period. Subject symptoms such as chest pain, chest tightness, and palpitation are closely related to increased stress and anxiety in children and adolescents. The present research aimed to determine the change in pediatric consult of the symptoms onset in children during the COVID-19 period compared with before and after the COVID-19 period.Methods: Children who visited Women and Children's Hospital, Qingdao University between January 23 to April 30, 2019 (pre-COVID-19 period), January 23 to April 30, 2020 (COVID-19 period), and January 23 to April 30, 2021 (post-COVID-19 period) presenting chest pain, chest tightness, and palpitation were recruited. Information to determine gender, ages, department for the initial visit, clinical manifestations, time from the latest onset to the visit, and diagnosis were recorded.Result: A total of 891 patients were enrolled in the present study (514 males; median age: 7.72). 123 patients presented during the pre-COVID-19 period while 130 during the COVID-19 period, nevertheless, the number substantially increased during the post-COVID-19 period (n=638). There was no significant difference among groups in the distribution of organic etiology. The median time from the latest onset to the visit during the pre-COVID-19 period was 7 days compared to 10 days during the COVID-19 period and 3 days during the post-COVID period. Conclusion: The pediatric consult of children with subject symptoms presented increased substantially during the post-COVID-19 period, with a less median time from the latest onset to the visit. The major etiology of subject symptoms was shown in favor of non-organic during the three periods.
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- 2022
17. High sensitivity micro-vibration sensor with cascaded optical fiber gratings
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Pengfei Zhang, Chao Wang, Fangjun Wang, Pengfei Zheng, Yaqi Tang, Zidan Gong, and Chi Chiu Chan
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- 2022
18. An FBG-Based Liquid Pressure Sensor Integrated with Flange Cylinder
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Junda Lao, Pengfei Zheng, Yaqi Tang, Ziwen Wang, Liuwei Wan, and Chi Chiu Chan
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- 2022
19. Highly Sensitive Physiological Sensor Based on Tapered Fiber-Optic Interferometer for Sweat Ph Detection
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Zidan Gong, Yisong Lei, Ziwen Wang, Ruming Gao, Jie Zhang, Zeji Sun, Yuyao Li, Xia Ouyang, Yaqi Tang, and ChiChiu Chan
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History ,Polymers and Plastics ,Business and International Management ,Industrial and Manufacturing Engineering - Published
- 2022
20. Microcystin-LR induced microfilament rearrangement and cell invasion by activating ERK/VASP/ezrin pathway in DU145 cells
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Xiaowen Zhang, Xiaoyu Yi, Qiang Zhang, Yaqi Tang, Yongzheng Lu, Baojie Liu, Zhifang Pan, Guohui Wang, and Weiguo Feng
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Male ,Actin Cytoskeleton ,Cytoskeletal Proteins ,Mice ,Microcystins ,Animals ,Mice, Nude ,Marine Toxins ,Toxicology - Abstract
Microcystin-LR (MC-LR) is an environmental toxin that is synthesized by cyanobacteria and considered a potential human carcinogen. However, the role of MC-LR in prostate cancer progression has not been elucidated. The purpose of this study was to investigate the effect of MC-LR on prostate cancer cell invasion and its underlying mechanisms. Transwell assay was performed, and the result showed that MC-LR increased DU145 cell invasion in a concentration-dependent manner. The result of Western blot showed that MC-LR promoted ERK phosphorylation, while enhancing VASP and ezrin phosphorylation. Moreover, PD0325901 was used to verify the role of the ERK/VASP/ezrin axis in MC-LR-promoted cell invasion. The results revealed that MC-LR promoted microfilament rearrangement and cell invasion by activating the ERK/VASP/ezrin pathway in DU145 cells. Finally, in vivo assay was performed, and the result suggested that MC-LR promoted p-ERK, p-VASP and p-ezrin expression and local invasion in nude mice model. Taken together, our data proved that MC-LR induced microfilament rearrangement and cell invasion by activating the ERK/VASP/ezrin pathway in DU145 cells.
- Published
- 2021
21. Virtual Vernier effect-based high sensitivity optical fiber humidity sensor
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Xinyong Dong, Chao Wang, Yaqi Tang, Shuangchen Ruan, and Chi Chiu Chan
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Optical fiber ,Materials science ,business.industry ,Polyacrylic acid ,Humidity ,Amplification factor ,Temperature measurement ,Polyvinyl alcohol ,law.invention ,chemistry.chemical_compound ,chemistry ,law ,Optoelectronics ,Fiber ,business ,Sensitivity (electronics) - Abstract
This paper presents an optical fiber-based humidity sensor which has tunable sensitivity by using virtual Vernier effect. It is formed by splicing a short length of hollow core fiber (HCF) at the end of a single-mode fiber (SMF) and fabricating a membrane of Polyvinyl Alcohol (PVA)/Polyacrylic Acid (PAA) at the end of HCF for humidity sensing. The experimental data of the proposed sensor shows that the sensitivity of −140 pm/%RH is achieved. Then the virtual Vernier effect is applied for data processing of the humidity sensor and the sensitivity is amplified with an adjustable amplification factor up to 20. The maximum achieved sensitivity is −2.875 nm/%RH.
- Published
- 2021
22. Fiber optic acoustic sensor based on Fiber Bragg grating Fabry-Perot(FBG-FP)cavity
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ZiXiong Qin, Fangjun Wang, Ziyang Xiang, Chi Chiu Chan, Pengfei Zhang, Yaqi Tang, and Chao Wang
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Frequency response ,Optical fiber ,Materials science ,business.industry ,Interference (wave propagation) ,law.invention ,Optics ,Fiber Bragg grating ,Intermediate frequency ,law ,business ,Sound pressure ,Sensitivity (electronics) ,Fabry–Pérot interferometer - Abstract
An acoustic sensor based on Fiber Bragg grating and Fabry Perot (FBG-FP) cavity is introduced in this paper. In the low frequency (20 Hz) field, the sensitivity reaches 0.43 V/Pa. In the intermediate frequency range of 700 Hz-2 kHz, it has relatively flat frequency response characteristics, and the sensitivity is 28.2 mV/Pa. The signal-to-noise can reach 53.1 dB (100 Hz), and the minimum detection sound pressure is 2.52 mPa/Hz1/2.
- Published
- 2021
23. A central circadian oscillator confers defense heterosis in hybrids without growth vigor costs
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Xing Wang Deng, Li Yang, Xuncheng Wang, Pengtao Liu, Yaqi Tang, Yaru Tang, Diqiu Ren, Guangming He, and Aolin Jia
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0106 biological sciences ,0301 basic medicine ,Chlorophyll ,Heterosis ,Science ,Circadian clock ,Arabidopsis ,General Physics and Astronomy ,Plant Immunity ,Biology ,Plant disease resistance ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,Article ,Epigenesis, Genetic ,03 medical and health sciences ,Plant immunity ,Plant hybridization ,Gene Expression Regulation, Plant ,Hybrid Vigor ,Epigenetics ,Hybrid ,Disease Resistance ,Genetics ,Multidisciplinary ,Bacteria ,Arabidopsis Proteins ,Starch ,General Chemistry ,Plants, Genetically Modified ,Circadian rhythms in plants ,Genetically modified organism ,030104 developmental biology ,Epigenetic Repression ,Hybridization, Genetic ,Salicylic Acid ,010606 plant biology & botany ,Transcription Factors - Abstract
Plant immunity frequently incurs growth penalties, which known as the trade-off between immunity and growth. Heterosis, the phenotypic superiority of a hybrid over its parents, has been demonstrated for many traits but rarely for disease resistance. Here, we report that the central circadian oscillator, CCA1, confers heterosis for bacterial defense in hybrids without growth vigor costs, and it even significantly enhances the growth heterosis of hybrids under pathogen infection. The genetic perturbation of CCA1 abrogated heterosis for both defense and growth in hybrids. Upon pathogen attack, the expression of CCA1 in F1 hybrids is precisely modulated at different time points during the day by its rhythmic histone modifications. Before dawn of the first infection day, epigenetic activation of CCA1 promotes an elevation of salicylic acid accumulation in hybrids, enabling heterosis for defense. During the middle of every infection day, diurnal epigenetic repression of CCA1 leads to rhythmically increased chlorophyll synthesis and starch metabolism in hybrids, effectively eliminating the immunity-growth heterosis trade-offs in hybrids., There is frequently a trade-off between plant immunity and growth. Here the authors show that the epigenetic control of CCA1, encoding a core component of the circadian oscillator, simultaneously promotes heterosis for both defense and growth in hybrids under pathogen invasion.
- Published
- 2021
24. Fiber Fluid-pressure Sensor with Extended Air Cavity
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Liuwei Wan, Chi Chiu Chan, Pengfei Zhang, Yaqi Tang, Chao Wang, and Qianqian Zhang
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Materials science ,Fiber ,Composite material ,Air cavity ,Fluid pressure - Abstract
We report a miniature optical fiber fluid-pressure sensor based on a Fabry-Perot interferometer with extended air cavity and enhanced sensitivity. A sample with 830 μm air cavity length exhibit pressure sensitivity of about 3920 nm/kPa.
- Published
- 2021
25. Long-Period Fiber Grating Wide-Range pH Sensor Based on Polyvinyl Alcohol/Polyacrylic Acid Hydrogel Coating
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Liuwei Wan, Chi Chiu Chan, Yi Xu, Yaqi Tang, Qianqian Zhang, Yanmei Tang, and Xinyong Dong
- Subjects
Range (particle radiation) ,Materials science ,010401 analytical chemistry ,Polyacrylic acid ,02 engineering and technology ,Repeatability ,Long-period fiber grating ,Grating ,021001 nanoscience & nanotechnology ,01 natural sciences ,Polyvinyl alcohol ,0104 chemical sciences ,chemistry.chemical_compound ,Hydrogel coating ,Chemical engineering ,chemistry ,Fiber optic sensor ,0210 nano-technology - Abstract
A wide-range pH sensor based on a coated long-period fiber grating is proposed. The pH responsive PVA/PAA hydrogel coating on the surface of the long period grating (LPG) swells/ deswells in response to change the local pH. The experimental results demonstrate a wide range for the PVA/PAA coated sensor in acid solution (from pH range 1.916 to 7.252). Moreover the sensor also shows a high repeatability and stability.
- Published
- 2020
26. Direct Synthesis of Gold Nanoparticles on Cysteine-rich Tags in Mammalian Cells
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Ying-Ying Wang, Sitong Liu, Wanzhong He, Zhaodi Jiang, Yaqi Tang, Xiangbing Qi, Gaihong Cai, Xiao-Man Liu, Xiumei Jin, Xinbin Cai, Yan Liu, Li-Lin Du, Yuhua Li, Yanyong Hu, She Chen, Ming Li, Xiaobin Sun, Ying Liu, and Pei Zhao
- Subjects
Colloidal gold ,Chemistry ,Combinatorial chemistry ,Cysteine - Abstract
We developed a novel auto-nucleation suppressed mechanism (ANSM) for direct synthesis of EM-visible gold nanoparticles (AuNPs) on cysteine-rich tags (e.g., metallothionein) in cells for single-molecule detection with electron microscopy (it accompanies our Nature Method manuscript, Jiang et al. 2020 [1]). Both tagged-fusion proteins expressed in cells (e.g.bacteria, yeast and mammalian cells) and antigens stained with antibody-tag fusion proteins can be visualized by this protocol. Here we describe the typical protocols (both the chemical fixation and the high pressure freezing cases) developed for ANSM-based AuNP synthesis in HeLa cells expressing metallothionein (MTn) tags (Figure 1). This approach should be widely applicable to many systems for EM visualization of single-molecule in mammalian cells.
- Published
- 2020
27. Direct Synthesis of Gold Nanoparticles on Cysteine-rich Tags in Yeast Cells
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Zhaodi Jiang, Li-Lin Du, Xiangbing Qi, Gaihong Cai, Pei Zhao, Ying Liu, Ying-Ying Wang, Xiaobin Sun, Xiao-Man Liu, Yan Liu, Xiumei Jin, Xinbin Cai, Ming Li, Yanyong Hu, Yuhua Li, Yaqi Tang, She Chen, Sitong Liu, and Wanzhong He
- Subjects
Chemistry ,Colloidal gold ,Combinatorial chemistry ,Yeast ,Cysteine - Abstract
We developed a novel auto-nucleation suppressed mechanism (ANSM) for direct synthesis of EM-visible gold nanoparticles (AuNPs) on cysteine-rich tags (e.g., metallothionein) in cells for single-molecule detection with electron microscopy (it accompanies our Nature Method manuscript, Jiang et al. 2020 [1]). Both tagged-fusion proteins expressed in cells (e.g.bacteria, yeast and mammalian cells) and antigens stained with antibody-tag fusion proteins can be visualized by this protocol. Here we describe the typical protocols (both the chemical fixation and the high pressure freezing cases) developed for ANSM-based AuNP synthesis in yeast cells expressing metallothionein (MTn) tags (Figure 1). This approach should be useful for EM visualization of single-molecule in yeast cells, and easier adapted for bacterial cells.
- Published
- 2020
28. EMT-Inducing Transcription Factors, Drivers of Melanoma Phenotype Switching, and Resistance to Treatment
- Author
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Yaqi Tang, Julie Caramel, Stéphane Dalle, and Simon Durand
- Subjects
0301 basic medicine ,Cancer Research ,Lineage (genetic) ,Review ,Biology ,Melanocyte ,lcsh:RC254-282 ,phenotype switching ,03 medical and health sciences ,0302 clinical medicine ,Melanocyte differentiation ,transcription factors ,medicine ,Carcinoma ,ZEB2/ZEB1 switch ,Transcription factor ,melanoma development ,Melanoma ,EMT ,Neural crest ,intra-tumor heterogeneity ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,medicine.disease ,Phenotype ,030104 developmental biology ,medicine.anatomical_structure ,Oncology ,030220 oncology & carcinogenesis ,embryonic structures ,melanocyte differentiation ,Cancer research ,neural-crest stem cells ,resistance to treatment - Abstract
Transcription factors, extensively described for their role in epithelial–mesenchymal transition (EMT-TFs) in epithelial cells, also display essential functions in the melanocyte lineage. Recent evidence has shown specific expression patterns and functions of these EMT-TFs in neural crest-derived melanoma compared to carcinoma. Herein, we present an update of the specific roles of EMT-TFs in melanocyte differentiation and melanoma progression. As major regulators of phenotype switching between differentiated/proliferative and neural crest stem cell-like/invasive states, these factors appear as major drivers of intra-tumor heterogeneity and resistance to treatment in melanoma, which opens new avenues in terms of therapeutic targeting.
- Published
- 2020
29. Genetically encoded tags for direct synthesis of EM-visible gold nanoparticles in cells
- Author
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Yuhua Li, Zhaodi Jiang, Gaihong Cai, Pei Zhao, Xiangbing Qi, Ying-Ying Wang, Li-Lin Du, Xinbin Cai, Yanyong Hu, Sitong Liu, Xiao-Man Liu, Yaqi Tang, Wanzhong He, Ying Liu, She Chen, Xiaobin Sun, Ming Li, Yan Liu, and Xiumei Jin
- Subjects
biology ,Cell-Free System ,Chemistry ,Endoplasmic reticulum ,Metal Nanoparticles ,Cell Biology ,biology.organism_classification ,Biochemistry ,Fusion protein ,Spindle pole body ,Cell-free system ,Cell biology ,Microscopy, Electron ,Microscopy, Fluorescence ,Colloidal gold ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Organelle ,Schizosaccharomyces ,Humans ,Gold ,Nuclear pore ,Molecular Biology ,Biotechnology ,HeLa Cells - Abstract
Genetically encoded tags for single-molecule imaging in electron microscopy (EM) are long-awaited. Here, we report an approach for directly synthesizing EM-visible gold nanoparticles (AuNPs) on cysteine-rich tags for single-molecule visualization in cells. We first uncovered an auto-nucleation suppression mechanism that allows specific synthesis of AuNPs on isolated tags. Next, we exploited this mechanism to develop approaches for single-molecule detection of proteins in prokaryotic cells and achieved an unprecedented labeling efficiency. We then expanded it to more complicated eukaryotic cells and successfully detected the proteins targeted to various organelles, including the membranes of endoplasmic reticulum (ER) and nuclear envelope, ER lumen, nuclear pores, spindle pole bodies and mitochondrial matrices. We further implemented cysteine-rich tag-antibody fusion proteins as new immuno-EM probes. Thus, our approaches should allow biologists to address a wide range of biological questions at the single-molecule level in cellular ultrastructural contexts.
- Published
- 2019
30. Direct synthesis of EM-visible gold nanoparticles on genetically encoded tags for single-molecule visualization in cells
- Author
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Ying Liu, Xiao-Man Liu, Ying-Ying Wang, Sitong Liu, Gaihong Cai, Zhaodi Jiang, Xiaobin Sun, Yan Liu, Yaqi Tang, Wanzhong He, Ming Li, Xiumei Jin, Li-Lin Du, Xiangbing Qi, Pei Zhao, Xinbin Cai, Yuhua Li, Yanyong Hu, and She Chen
- Subjects
medicine.anatomical_structure ,Chemistry ,Colloidal gold ,Endoplasmic reticulum ,Cell ,Organelle ,medicine ,Ultrastructure ,Nuclear pore ,Spindle pole body ,Lumen (unit) ,Cell biology - Abstract
Single-molecule visualization in cells with genetically encoded tags for electron microscopy (EM) has been a long-awaited but unimplemented tool for cell biologists. Here, we report an approach for directly synthesizing EM-visible gold nanoparticles (AuNPs) on cysteine-rich tags for single-molecule visualization in cells. We first uncovered an auto-nucleation suppression mechanism that allows specific synthesis of AuNPs on isolated cysteine-rich tags. We next exploited this mechanism to develop an approach for single-molecule detection of proteins in prokaryotic cells and achieved an unprecedented labeling efficiency. We then expanded it to more complicated eukaryotic cells and successfully detected the proteins targeted to various organelles, including the membranes of endoplasmic reticulum (ER) and nuclear envelope, ER lumen, nuclear pores, spindle pole bodies, and mitochondrial matrix. Thus, our implementation of genetically encoded tags for EM should allow cell biologists to address an enormous range of biological questions at single-molecule level in diverse cellular ultrastructural contexts without using antibodies.
- Published
- 2019
- Full Text
- View/download PDF
31. Author Correction: Genetically encoded tags for direct synthesis of EM-visible gold nanoparticles in cells
- Author
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Xiao-Man Liu, Xiaobin Sun, Yanyong Hu, Gaihong Cai, Yuhua Li, Ying Liu, Yaqi Tang, Li-Lin Du, Ying-Ying Wang, Xiumei Jin, Zhaodi Jiang, Pei Zhao, She Chen, Sitong Liu, Wanzhong He, Yan Liu, Xinbin Cai, Xiangbing Qi, and Ming Li
- Subjects
Chemistry ,Colloidal gold ,Published Erratum ,Nanotechnology ,Cell Biology ,Molecular Biology ,Biochemistry ,Biotechnology - Published
- 2020
32. Genome-wide association study (GWAS) of ovarian cancer in Japanese predicted regulatory variants in 22q13.1
- Author
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Mariko Naito, Norihiro Furusyo, Yoshinori Murakami, Makoto Hirata, Varalee Yodsurang, Yukie Takahashi, Yoichiro Kamatani, Shoichiro Tsugane, Atsushi Takahashi, Yaqi Tang, Norie Sawada, Taiki Yamaji, Yukihide Momozawa, Akimune Fukushima, Asahi Hishida, Chizu Tanikawa, Michiaki Kubo, Kenji Wakai, Junichi Sugawara, Motoki Iwasaki, Atsushi Shimizu, Koichi Matsuda, and Nobuo Fuse
- Subjects
0301 basic medicine ,Genotyping Techniques ,Chromosomes, Human, Pair 22 ,Gene Expression ,Genome-wide association study ,Electrophoretic Mobility Shift Assay ,Restriction Fragment Mapping ,Biochemistry ,Geographical locations ,Japan ,Medicine and Health Sciences ,media_common ,Genetics ,Ovarian Neoplasms ,Multidisciplinary ,Transcriptional Control ,Genomics ,Middle Aged ,3. Good health ,Ovarian Cancer ,Europe ,Oncology ,Medicine ,Female ,Research Article ,Science ,Single-nucleotide polymorphism ,Biology ,Research and Analysis Methods ,Polymorphism, Single Nucleotide ,Molecular Genetics ,03 medical and health sciences ,DNA-binding proteins ,medicine ,Genome-Wide Association Studies ,media_common.cataloged_instance ,Humans ,Gene Regulation ,European Union ,Allele ,European union ,Molecular Biology Techniques ,Molecular Biology ,Alleles ,Genetic association ,Aged ,Gene Mapping ,Case-control study ,Genetic Variation ,Biology and Life Sciences ,Computational Biology ,Cancers and Neoplasms ,Proteins ,Human Genetics ,Odds ratio ,medicine.disease ,Genome Analysis ,Regulatory Proteins ,030104 developmental biology ,Case-Control Studies ,People and places ,Ovarian cancer ,Gynecological Tumors ,Genome-Wide Association Study ,Transcription Factors - Abstract
Genome-wide association studies (GWAS) have identified greater than 30 variants associated with ovarian cancer, but most of these variants were investigated in European populations. Here, we integrated GWAS and subsequent functional analyses to identify the genetic variants with potential regulatory effects. We conducted GWAS for ovarian cancer using 681 Japanese cases and 17,492 controls and found that rs137672 on 22q13.1 exhibited a strong association with a P-value of 1.05 × 10(-7) and an odds ratio of 0.573 with a 95% confidence interval of 0.466-0.703. In addition, three previously reported SNPs, i.e., rs10088218, rs9870207 and rs1400482, were validated in the Japanese population (P < 0.05) with the same risk allele as noted in previous studies. Functional studies including regulatory feature analysis and electrophoretic mobility shift assay (EMSA) revealed two regulatory SNPs in 22q13.1, rs2072872 and rs6509, that affect the binding affinity to some nuclear proteins in ovarian cancer cells. The plausible regulatory proteins whose motifs could be affected by the allele changes of these two SNPs were also proposed. Moreover, the protective G allele of rs6509 was associated with a decreased SYNGR1 expression level in normal ovarian tissues. Our findings elucidated the regulatory variants in 22q13.1 that are associated with ovarian cancer risk.
- Published
- 2018
33. All-polymer solar cells utilizing low band gap polymers as donor and acceptor
- Author
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Yaqi Tang and Christopher R. McNeill
- Subjects
chemistry.chemical_classification ,Materials science ,Polymers and Plastics ,Band gap ,Analytical chemistry ,Polymer ,Condensed Matter Physics ,Acceptor ,Polymer solar cell ,Amorphous solid ,chemistry ,Polymer chemistry ,Materials Chemistry ,Quantum efficiency ,Polymer blend ,Physical and Theoretical Chemistry ,Spectroscopy - Abstract
All-polymer solar cells based on blends of the low band gap polymers poly{[4,8-bis[(2-ethylhexyl)oxy]benzo[1,2-b:4,5-b′]dithiophene-2,6-diyl][3-fluoro-2-[(2-ethylhexyl)carbonyl]thieno[3,4-b]thiophenediyl]} (PTB7) and poly{[N,N-9-bis(2-octyldodecyl)-naphthalene-1,4,5,8-bis(dicarboximide)-2,6-diyl]-alt-5,59-(2,29-bithiophene)} (P(NDI2OD-T2)) are demonstrated. The use of the donor polymer PTB7 instead of poly(3-hexylthiophene) results in a higher open-circuit voltage and an overall spectral response better matched to the solar spectrum. A power conversion efficiency of 1.1% is reported with a peak external quantum efficiency of 18% at a wavelength of 680 nm. The microstructure of PTB7:P(NDI2OD-T2) blends is also investigated using a combination of grazing-incidence wide-angle X-ray scattering (GIWAXS), near-edge X-ray fine-structure (NEXAFS) spectroscopy, atomic force microscopy (AFM), and scanning transmission X-ray microscopy (STXM). GIWAXS measurements show that PTB7:P(NDI2OD-T2) blends contain P(NDI2OD-T2) crystallites with a (100) thickness of 9.5 nm dispersed in an amorphous PTB7 matrix. STXM measurements indicate a lack of mesoscale phase separation, with AFM and NEXAFS measurements revealing a P(NDI2OD-T2)-rich top surface with fibrillar morphology. These results indicate that the pairing of low band gap polymers as both donor and acceptor polymers in all-polymer solar cells may be an effective strategy for realizing high-efficiency all-polymer solar cells. © 2012 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys, 2013
- Published
- 2012
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