109 results on '"Yann Ferrand"'
Search Results
2. CPL-active water-soluble aromatic oligoamide foldamers
- Author
-
Vincent Laffilé, Kevin Moreno, Eric Merlet, Nathan McClenaghan, Yann Ferrand, and Céline Olivier
- Subjects
Organic Chemistry ,Physical and Theoretical Chemistry ,Biochemistry - Abstract
Helically folded oligoquinolines exhibit circularly polarized luminescence in water.
- Published
- 2023
3. Combining local conformational preferences and solvophobic effects in helical aromatic oligoamide foldamers
- Author
-
Binhao Teng, Joan Atcher, Lars Allmendinger, Céline Douat, Yann Ferrand, and Ivan Huc
- Subjects
Organic Chemistry ,Physical and Theoretical Chemistry ,Biochemistry - Abstract
Removing features that locally control conformations in aromatic oligoamides hampers helical folding in DMSO but not in water where the loss is compensated by hydrophobic effects.
- Published
- 2023
4. High-affinity single and double helical pseudofoldaxanes with cationic guests
- Author
-
Yulong Zhong, Thomas A. Sobiech, Brice Kauffmann, Bo Song, Xiaopeng Li, Yann Ferrand, Ivan Huc, and Bing Gong
- Subjects
General Chemistry - Abstract
Helical aromatic oligoamide foldamers provide negative cavities that strongly bind dicationic guests, giving complexes as stable pseudofoldaxanes with few precedents.
- Published
- 2023
5. A π-extended phenanthrene-fused aza[7]helicenium as a novel chiroptically-active architecture in organic and aqueous media
- Author
-
Céline Olivier, Nao Nagatomo, Tadashi Mori, Nathan McClenaghan, Gediminas Jonusauskas, Brice Kauffmann, Yutaka Kuwahara, Makoto Takafuji, Hirotaka Ihara, Yann Ferrand, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), and European Project: IdEx Bordeaux (ANR-10-IDEX- 003-02)
- Subjects
Organic Chemistry ,[CHIM.MATE]Chemical Sciences/Material chemistry - Abstract
The synthesis and characterization of an original π-extended cationic azahelicene is reported. The phenanthrene-fused aza[7]helicene derivative encompasses a total of ten aromatic fused rings leading to a dissymmetric yet helically folded structure, as revealed by NMR and X-ray diffraction analyses. The polyaromatic and cationic nature of the new azahelicenium makes it soluble in both organic and aqueous media, which allowed photophysical studies in solvents of different polarities. The extended chromophoric species demonstrates a broad absorption over the whole visible range and orange-red fluorescence emission. Chiral resolution of the racemate was performed subsequently, affording two optically pure and configurationally stable azahelicenium enantiomers. Multi-band circular dichroism and long-wavelength circularly polarized emission were observed, associated with remarkable absorption and luminescence dissymmetry factors, both in organic and aqueous media.
- Published
- 2023
6. Foldaxanes: Rotaxane-like Architectures from Foldamers
- Author
-
Victor Koehler, Arundhati Roy, Ivan Huc, and Yann Ferrand
- Subjects
Rotaxanes ,General Medicine ,General Chemistry - Abstract
Mechanically interlocked molecules such as rotaxanes and catenanes contain free-moving components that cannot dissociate and have enabled the investigation and control of various translational and rotational molecular motions. The architecture of pseudo-rotaxanes and of some kinetically labile rotaxanes is comparable to that of rotaxanes but their components are reversibly associated and not irreversibly interlocked. In other words, pseudo-rotaxanes may fall apart. This Account focuses on a peculiar family of rotaxane-like architectures termed foldaxanes.Foldaxanes consist of a helically folded oligomer wound around a rod-like dumbbell-shaped guest. Winding of the helix around the rod thus entails an unwinding-rewinding process that creates a kinetic barrier. It follows that foldaxanes, albeit reversibly assembled, have significant lifetimes and may not fall apart while defined molecular motions are triggered. Foldaxanes based on helically folded aromatic oligoamide hosts and oligo(alkyl carbamate) guests can be designed rationally through the inclusion of complementary binding motifs on the rod and at the inner rim of the helix so that helix length and rod length match. Single helical foldaxanes (bimolecular species) and double helical foldaxanes (trimolecular species) have thus been produced as well as poly[
- Published
- 2022
7. A pH-and Metal-Actuated Molecular Shuttle in Water
- Author
-
Amine Kriat, Simon Pascal, Brice Kauffmann, Yann Ferrand, David Bergé‐Lefranc, Didier Gigmes, Olivier Siri, Anthony Kermagoret, David Bardelang, Institut de Chimie Radicalaire (ICR), Aix Marseille Université (AMU)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Centre Interdisciplinaire de Nanoscience de Marseille (CINaM), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), Soutien à la Recherche de l'Institut Européen de Chimie Biologique, Université Sciences et Technologies - Bordeaux 1 (UB)-Institut Européen de Chimie et de Biologie-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Chimie et Biologie des Membranes et des Nanoobjets (CBMN), and Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry ,Organic Chemistry ,[CHIM.CRIS]Chemical Sciences/Cristallography ,[CHIM.COOR]Chemical Sciences/Coordination chemistry ,General Chemistry ,Catalysis - Abstract
International audience; The structure of the Viologen-Phenylene-Imidazole (VPI) guest, previously shown to be bound by cucurbit[7]uril (CB[7]) with binding modes depending on pH and silver ions, has been extended by adding hydrophobic groups on the two extremities of VPI before investigations of CB[7] binding by NMR, ITC, X-ray diffraction, UV-vis and fluorescence spectroscopies. With an imidazole station extended by a naphthalene group (VPI-N), binding modes of CB[7] are similar to those previously observed. However, with the viologen extended by a tolyl group (T-VPI), CB[7] preferentially sits on station T, shuttling between the T and P stations at acid pH or after Ag + addition. The CB[7]•T-VPI complex thus behaves as a metal-actuated thermodynamic stop-and-go molecular shuttle featured by fast and autonomous ring translocation between two stations and a continuum for fractional station occupancy solely and easily controlled by Ag + concentration.
- Published
- 2023
8. Comparing two operating-room-allocation policies for elective and emergency surgeries.
- Author
-
Yann Ferrand, Michael J. Magazine, and Uday S. Rao
- Published
- 2010
- Full Text
- View/download PDF
9. [3]Foldarotaxane-mediated synthesis of an improbable [2]rotaxane
- Author
-
Victor Koehler, Maxime Gauthier, Chenhao Yao, Karine Fournel-Marotte, Philip Waelès, Brice Kauffmann, Ivan Huc, Frédéric Coutrot, Yann Ferrand, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Institut des Biomolécules Max Mousseron [Pôle Chimie Balard] (IBMM), Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Ecole Nationale Supérieure de Chimie de Montpellier (ENSCM), Université de Montpellier (UM), Soutien à la Recherche de l'Institut Européen de Chimie Biologique, Université Sciences et Technologies - Bordeaux 1 (UB)-Institut Européen de Chimie et de Biologie-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Ludwig-Maximilians University [Munich] (LMU), and FERRAND, Yann
- Subjects
[CHIM.INOR] Chemical Sciences/Inorganic chemistry ,Rotaxanes ,[CHIM] Chemical Sciences ,Materials Chemistry ,Metals and Alloys ,Ceramics and Composites ,[CHIM]Chemical Sciences ,General Chemistry ,[CHIM.INOR]Chemical Sciences/Inorganic chemistry ,Catalysis ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials - Abstract
The wrapping of an aromatic oligoamide helix around an active ester-containing [2]rotaxane enforced the sliding and the sequestration of the surrounding macrocycle around a part of the axle for which it has no formal affinity. The foldamer-mediated compartmentalization of the [2]rotaxane shuttle was subsequently used to prepare an improbable rotaxane.
- Published
- 2022
10. Accessing Improbable Foldamer Shapes with Strained Macrocycles
- Author
-
Masatoshi Kawahata, Aya Tanatani, Vojislava Pophristic, Yann Ferrand, Kosuke Katagiri, Ko Urushibara, Ryan D'Elia, Ivan Huc, Zhiwei Liu, Estelle Morvan, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), Ochanomizu University, Konan University [Kobe, Japan], Showa Pharmaceutical University, Institut Européen de Chimie et Biologie (IECB), and Centre National de la Recherche Scientifique (CNRS)-Université de Bordeaux (UB)-Institut National de la Santé et de la Recherche Médicale (INSERM)
- Subjects
Models, Molecular ,Molecular Conformation ,Hot Paper ,Random hexamer ,Alkylation ,010402 general chemistry ,Crystallography, X-Ray ,01 natural sciences ,Catalysis ,Molecular dynamics ,chemistry.chemical_compound ,foldamer ,Amide ,cis amide ,Full Paper ,010405 organic chemistry ,fluxionality ,Organic Chemistry ,Foldamer ,General Chemistry ,Full Papers ,strained structures ,Amides ,0104 chemical sciences ,Folding (chemistry) ,Crystallography ,[CHIM.POLY]Chemical Sciences/Polymers ,Monomer ,chemistry ,Cyclization ,Helix ,macrocycle - Abstract
The alkylation of some secondary amide functions with a dimethoxybenzyl (DMB) group in oligomers of 8‐amino‐2‐quinolinecarboxylic acid destabilizes the otherwise favored helical conformations, and allows for cyclization to take place. A cyclic hexamer and a cyclic heptamer were produced in this manner. After DMB removal, X‐ray crystallography and NMR show that the macrocycles adopt strained conformations that would be improbable in noncyclic species. The high helix folding propensity of the main chain is partly expressed in these conformations, but it remains frustrated by macrocyclization. Despite being homomeric, the macrocycles possess inequivalent monomer units. Experimental and computational studies highlight specific fluxional pathways within these structures. Extensive simulated annealing molecular dynamics allow for the prediction of the conformations for larger macrocycles with up to sixteen monomers., Frustrating folding propensity by imposing a macrocyclic structure to an otherwise helical backbone produces improbable yet stable strained molecular shapes. Both experiments and computational studies show how aromatic oligoamide foldamers constrained within a macrocycle try to fulfill their strong propensity to adopt helical conformations by forming local loops and unfolded sites that connect helical segments. Defined fluxional conformational pathways can be evidenced in such molecules.
- Published
- 2021
11. Interplay between a Foldamer Helix and a Macrocycle in a Foldarotaxane Architecture
- Author
-
Ivan Huc, Yann Ferrand, Maxime Gauthier, Frédéric Coutrot, Caroline Clavel, Brice Kauffmann, Victor Koehler, Institut des Biomolécules Max Mousseron [Pôle Chimie Balard] (IBMM), Ecole Nationale Supérieure de Chimie de Montpellier (ENSCM)-Institut de Chimie du CNRS (INC)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS), Institut Européen de Chimie et Biologie (IECB), and Centre National de la Recherche Scientifique (CNRS)-Université de Bordeaux (UB)-Institut National de la Santé et de la Recherche Médicale (INSERM)
- Subjects
Steric effects ,Rotaxane ,Chemistry ,[CHIM.ORGA]Chemical Sciences/Organic chemistry ,010405 organic chemistry ,Supramolecular chemistry ,Foldamer ,General Chemistry ,Nuclear magnetic resonance spectroscopy ,General Medicine ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Axle ,Crystallography ,Helix ,Molecular motion ,ComputingMilieux_MISCELLANEOUS - Abstract
The design and synthesis of a novel rotaxane/foldaxane hybrid architecture is reported. The winding of an aromatic oligoamide helix host around a dumbbell-shaped thread-like guest, or axle, already surrounded by a macrocycle was evidenced by NMR spectroscopy and X-ray crystallography. The process proved to depend on the position of the macrocycle along the axle and the associated steric hindrance. The macrocycle thus behaves as a switchable shield that modulates the affinity of the helix for the axle. Reciprocally, the foldamer helix acts as a supramolecular auxiliary that compartmentalizes the axle. In some cases, the macrocycle is forced to move along the axle to allow the foldamer to reach its best recognition site.
- Published
- 2021
12. Self-assembling figure-of-eight and pseudoplectoneme aromatic oligoamide ribbons
- Author
-
Chenhao Yao, Brice Kauffmann, Ivan Huc, and Yann Ferrand
- Subjects
Materials Chemistry ,Metals and Alloys ,Ceramics and Composites ,General Chemistry ,Amides ,Catalysis ,Protein Structure, Secondary ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials - Abstract
Two oligoamide macrocycles composed of eight and twelve 7-amino-8-fluoro-2-quinolinecarboxylic acid monomers were synthesised despite the propensity of their acyclic precursors to fold and self-assemble into double helices. Macrocyclisations were made possible through the transient use of helicity disruptors. The resulting macrocyclic ribbons were found to adopt figure-of-eight and pseudoplectoneme shapes that maintain an ability to self-assemble.
- Published
- 2022
13. Selective and Cooperative Photocycloadditions within Multistranded Aromatic Sheets
- Author
-
Bappaditya Gole, Brice Kauffmann, Arnaud Tron, Victor Maurizot, Nathan McClenaghan, Ivan Huc, Yann Ferrand, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Soutien à la Recherche de l'Institut Européen de Chimie Biologique, Université Sciences et Technologies - Bordeaux 1 (UB)-Institut Européen de Chimie et de Biologie-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Institut des Sciences Moléculaires (ISM), Université Montesquieu - Bordeaux 4-Université Sciences et Technologies - Bordeaux 1 (UB)-École Nationale Supérieure de Chimie et de Physique de Bordeaux (ENSCPB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Ludwig-Maximilians-Universität München (LMU), and Ferrand, Yann
- Subjects
photochemistry ,Magnetic Resonance Spectroscopy ,[CHIM.ORGA]Chemical Sciences/Organic chemistry ,cooperativity ,structure elucidation ,Molecular Conformation ,General Chemistry ,[CHIM.ORGA] Chemical Sciences/Organic chemistry ,Biochemistry ,Amides ,Catalysis ,Foldamer ,aromatic sheet ,Colloid and Surface Chemistry ,X-ray crystallography - Abstract
International audience; A series of aromatic helix-sheet-helix oligoamide foldamers composed of several different photosensitive diazaanthracene units have been designed and synthesized. Molecular objects up to 7 kDa were straightforwardly produced on a 100 mg scale. NMR and crystallographic investigations revealed that helix-sheet-helix architectures can adopt one or two distinct conformations. Sequences composed of an even number of turn units were found to fold in a canonical symmetrical conformation with two helices of identical handedness stacked above and below the sheet segment. Sequences composed of an odd number of turns revealed a coexistence between a canonical fold with helices of opposite handedness, and an alternate fold with a twist within the sheet and two helices of identical handedness. The proportions between these species could be manipulated, in some cases quantitatively, being dependent on solvent, temperature and absolute control of helix handedness. Diazaanthracene units were shown to display distinct reactivity towards 4+4 photocycloadditions according to the substituent in the 9 position. Their organization within the sequences was programmed to allow photoreactions to take place in a specific order. Reaction pathways and kinetics were deciphered and products characterized, demonstrating the possibility to orchestrate successive photoreactions so as to avoid orphan units, or to deliberately produce orphan units at precise locations. Strong cooperative effects were observed in which the photoreaction rate was influenced by the presence (or absence) of photoadducts in the structure. Multiple photoreactions within the aromatic sheet eventually lead to the structure lengthening and stiffening, locking conformational equilibria. Photoproducts could be thermally reverted.
- Published
- 2022
14. Multiturn Hollow Helices: Synthesis and Folding of Long Aromatic Oligoamides
- Author
-
Ivan Huc, Yann Ferrand, Bing Gong, Brice Kauffmann, Wen Wu Xu, Yulong Zhong, Rui Liu, Zhong-Lin Lu, Xiao Cheng Zeng, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), and École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
[CHIM.ORGA]Chemical Sciences/Organic chemistry ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Oligomer ,0104 chemical sciences ,3. Good health ,Folding (chemistry) ,Coupling (electronics) ,Crystallography ,chemistry.chemical_compound ,Physical and Theoretical Chemistry ,ComputingMilieux_MISCELLANEOUS - Abstract
Aromatic oligoamides adopting helical conformations are synthesized by coupling carboxyl-terminated basic units having two, four, and eight residues to amine-terminated oligomer precursors. Coupling yields show no noticeable reduction with the size of the basic units or the final product. One- and two-dimensional NMR spectroscopy and computational studies demonstrate the reliable helical folding of these oligomers. The X-ray structure of 16mer
- Published
- 2020
15. Allosteric Recognition of Homomeric and Heteromeric Pairs of Monosaccharides by a Foldamer Capsule
- Author
-
Brice Kauffmann, Cameron D. Mackereth, Yann Ferrand, Pedro Mateus, Ivan Huc, Nagula Chandramouli, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), and École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Circular dichroism ,Stereochemistry ,Allosteric regulation ,carbohydrates ,helical capsule ,010402 general chemistry ,01 natural sciences ,Catalysis ,Molecular recognition ,foldamer ,Molecule ,Homomeric ,[CHIM]Chemical Sciences ,foldamers ,arabinose ,Research Articles ,X-ray crystallography ,allostery ,Chemistry ,[CHIM.ORGA]Chemical Sciences/Organic chemistry ,010405 organic chemistry ,Foldamer ,xylose ,General Chemistry ,Nuclear magnetic resonance spectroscopy ,General Medicine ,helical capsules ,Tautomer ,NMR ,circular dichroism ,0104 chemical sciences ,3. Good health ,Molecular Recognition ,Research Article - Abstract
The recognition of either homomeric or heteromeric pairs of pentoses in an aromatic oligoamide double helical foldamer capsule was evidenced by circular dichroism (CD), NMR spectroscopy, and X‐ray crystallography. The cavity of the host was predicted to be large enough to accommodate simultaneously two xylose molecules and to form a 1:2 complex (one container, two saccharides). Solution and solid‐state data revealed the selective recognition of the α‐4C1‐d‐xylopyranose tautomer, which is bound at two identical sites in the foldamer cavity. A step further was achieved by sequestering a heteromeric pair of pentoses, that is, one molecule of α‐4C1‐d‐xylopyranose and one molecule of β‐1C4‐d‐arabinopyranose despite the symmetrical nature of the host and despite the similarity of the guests. Subtle induced‐fit and allosteric effects are responsible for the outstanding selectivities observed., Two monosacharides fit in an aromatic double helical foldamer container. Binding is shown to be selective in terms of the sugar anomer, pyranose/furanose tautomer, and helix handedness, and leads to well defined homomeric or heteromeric complexes. One heteromeric complex selectively forms out of 42 different possibilities.
- Published
- 2020
16. Aromatic foldamers as scaffolds for metal second coordination sphere design
- Author
-
Michael L. Singleton, Ivan Huc, Brice Kauffmann, Antoine Meunier, Yann Ferrand, Thierry Granier, Guillaume Lautrette, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), Imagerie Moléculaire et Nanobiotechnologies - Institut Européen de Chimie et Biologie (IECB), Université Sciences et Technologies - Bordeaux 1-Centre National de la Recherche Scientifique (CNRS), Ludwig-Maximilians-Universität München (LMU), and UCL - SST/IMCN/MOST - Molecular Chemistry, Materials and Catalysis
- Subjects
Modularity (networks) ,Materials science ,Coordination sphere ,010405 organic chemistry ,business.industry ,[CHIM.ORGA]Chemical Sciences/Organic chemistry ,Foldamer ,Infrared spectroscopy ,Nanotechnology ,General Chemistry ,Modular design ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,3. Good health ,Metal ,chemistry.chemical_compound ,Chemistry ,Monomer ,chemistry ,visual_art ,Cluster (physics) ,visual_art.visual_art_medium ,[CHIM.COOR]Chemical Sciences/Coordination chemistry ,business - Abstract
As metalloproteins exemplify, the chemical and physical properties of metal centers depend not only on their first but also on their second coordination sphere. Installing arrays of functional groups around the first coordination sphere of synthetic metal complexes is thus highly desirable, but it remains a challenging objective. Here we introduce a novel approach to produce tailored second coordination spheres. We used bioinspired artificial architectures based on aromatic oligoamide foldamers to construct a rigid, modular and well-defined environment around a metal complex. Specifically, aza-aromatic monomers having a tethered [2Fe–2S] cluster have been synthesized and incorporated in conical helical foldamer sequences. Exploiting the modularity and predictability of aromatic oligoamide structures allowed for the straightforward design of a conical architecture able to sequester the metal complex in a confined environment. Even though no direct metal complex–foldamer interactions were purposely designed in this first generation model, crystallography, NMR and IR spectroscopy concurred to show that the aromatic oligoamide backbone alters the structure and fluxional processes of the metal cluster., Wrapping a [2Fe–2S] metal complex in an aromatic foldamer helix is introduced as a new approach to tailor a second coordination sphere.
- Published
- 2021
17. Inside Cover: Interplay between a Foldamer Helix and a Macrocycle in a Foldarotaxane Architecture (Angew. Chem. Int. Ed. 15/2021)
- Author
-
Victor Koehler, Caroline Clavel, Brice Kauffmann, Ivan Huc, Frédéric Coutrot, Maxime Gauthier, Yann Ferrand, Institut des Biomolécules Max Mousseron [Pôle Chimie Balard] (IBMM), Ecole Nationale Supérieure de Chimie de Montpellier (ENSCM)-Institut de Chimie du CNRS (INC)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS), Institut Européen de Chimie et Biologie (IECB), Centre National de la Recherche Scientifique (CNRS)-Université de Bordeaux (UB)-Institut National de la Santé et de la Recherche Médicale (INSERM), Coutrot, Frédéric, and Université de Bordeaux (UB)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Physics ,Crystallography ,[CHIM.ORGA]Chemical Sciences/Organic chemistry ,Helix ,Molecular motion ,Foldamer ,Cover (algebra) ,General Chemistry ,[CHIM.ORGA] Chemical Sciences/Organic chemistry ,Catalysis ,ComputingMilieux_MISCELLANEOUS - Abstract
International audience
- Published
- 2021
18. Influence of Positional Isomerism on the Chiroptical Properties of Functional Aromatic Oligoamide Foldamers
- Author
-
Thierry Buffeteau, Céline Olivier, Nathan D. McClenaghan, Eric Merlet, Kevin Moreno, Yann Ferrand, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), Institut des Sciences Moléculaires (ISM), and Université Montesquieu - Bordeaux 4-Université Sciences et Technologies - Bordeaux 1-École Nationale Supérieure de Chimie et de Physique de Bordeaux (ENSCPB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Fluorophore ,010405 organic chemistry ,Quinoline ,Substituent ,circularly polarized luminescence ,General Chemistry ,Hardware_PERFORMANCEANDRELIABILITY ,[CHIM.MATE]Chemical Sciences/Material chemistry ,010402 general chemistry ,vibrational circular dichroism ,01 natural sciences ,0104 chemical sciences ,chemistry.chemical_compound ,Crystallography ,oligoamides ,Enantiopure drug ,chemistry ,Vibrational circular dichroism ,Hardware_INTEGRATEDCIRCUITS ,[CHIM]Chemical Sciences ,foldamers ,Enantiomer ,Chirality (chemistry) ,Luminescence ,positional isomerism - Abstract
A series of functionalized quinoline-based aromatic oligoamide foldamers were prepared in their two enantiomeric forms, comprising an enantiopure terminal camphanyl chiral inducer, which governed the adjacent (P-/M-) helical-handedness. Hierarchical chirality transfer was further investigated in chromophore-appended variants via a range of electronic and vibrational spectroscopic techniques, including circularly polarized luminescence, vibrational circular dichroism and fluorescence. Intense total and polarized photoluminescence (up to phi(lum)=0.39, g(lum)=1.5x10(-3)) was observed in the visible region from these modular multicomponent architectures and a significant influence of positional isomerism was evidenced. The optimal position of a fluorophore substituent on the quinoline hexamers was determined as being position 2 over position 6, as stronger chiroptical features were systematically observed with the 2-positioned derivatives.
- Published
- 2021
19. Sensing a binding event through charge transport variations using an aromatic oligoamide capsule
- Author
-
Gilles Pecastaings, Alejandro Méndez-Ardoy, Alice Boulloy, Brice Kauffmann, Ivan Huc, Thierry Buffeteau, Dario M. Bassani, Yann Ferrand, Antoine Jacquet, Pedro Mateus, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Institut des Sciences Moléculaires (ISM), Université Montesquieu - Bordeaux 4-Université Sciences et Technologies - Bordeaux 1-École Nationale Supérieure de Chimie et de Physique de Bordeaux (ENSCPB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Institut Européen de Chimie et Biologie (IECB), Université de Bordeaux (UB)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Laboratoire de Chimie des Polymères Organiques (LCPO), Centre National de la Recherche Scientifique (CNRS)-Université de Bordeaux (UB)-Ecole Nationale Supérieure de Chimie, de Biologie et de Physique (ENSCBP)-Institut Polytechnique de Bordeaux-Institut de Chimie du CNRS (INC), ANR-19-CE18-0018,SERO6Pain,Les voies de signalisation du récepteur 5-HT6: de nouvelles cibles pour le traitement de la douleur neuropathique?(2019), European Project: 707071,H2020,H2020-MSCA-IF-2015,RAMSES(2016), École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), Centre National de la Recherche Scientifique (CNRS)-Université de Bordeaux (UB)-Institut National de la Santé et de la Recherche Médicale (INSERM), Centre National de la Recherche Scientifique (CNRS)-Institut Polytechnique de Bordeaux-Ecole Nationale Supérieure de Chimie, de Biologie et de Physique (ENSCBP)-Université de Bordeaux (UB)-Institut de Chimie du CNRS (INC), Team 4 LCPO : Polymer Materials for Electronic, Energy, Information and Communication Technologies, Centre National de la Recherche Scientifique (CNRS)-Institut Polytechnique de Bordeaux-Ecole Nationale Supérieure de Chimie, de Biologie et de Physique (ENSCBP)-Université de Bordeaux (UB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Institut Polytechnique de Bordeaux-Ecole Nationale Supérieure de Chimie, de Biologie et de Physique (ENSCBP)-Université de Bordeaux (UB)-Institut de Chimie du CNRS (INC), Ludwig-Maximilians-Universität München (LMU), Université Montesquieu - Bordeaux 4-Université Sciences et Technologies - Bordeaux 1 (UB)-École Nationale Supérieure de Chimie et de Physique de Bordeaux (ENSCPB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Université de Bordeaux (UB)-Ecole Nationale Supérieure de Chimie, de Biologie et de Physique (ENSCBP)-Institut Polytechnique de Bordeaux-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Université de Bordeaux (UB)-Ecole Nationale Supérieure de Chimie, de Biologie et de Physique (ENSCBP)-Institut Polytechnique de Bordeaux-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université de Bordeaux (UB)-Ecole Nationale Supérieure de Chimie, de Biologie et de Physique (ENSCBP)-Institut Polytechnique de Bordeaux-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Admin, Oskar, Les voies de signalisation du récepteur 5-HT6: de nouvelles cibles pour le traitement de la douleur neuropathique? - - SERO6Pain2019 - ANR-19-CE18-0018 - AAPG2019 - VALID, and Aryl amide metallofoldamersas selective saccharide sensors - RAMSES - - H20202016-03-01 - 2018-02-28 - 707071 - VALID
- Subjects
chemistry.chemical_classification ,[CHIM.MATE] Chemical Sciences/Material chemistry ,010405 organic chemistry ,[CHIM.ORGA]Chemical Sciences/Organic chemistry ,Carboxylic acid ,Foldamer ,Protonation ,General Chemistry ,[CHIM.MATE]Chemical Sciences/Material chemistry ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,Crystallography ,chemistry.chemical_compound ,Chemistry ,Dicarboxylic acid ,Deprotonation ,chemistry ,Monolayer ,Tartaric acid ,Molecule - Abstract
The selective binding properties of a 13-mer oligoamide foldamer capsule composed of 4 different aromatic subunits are reported. The capsule was designed to recognize dicarboxylic acids through multiple-point interactions owing to a combination of protonation/deprotonation events, H-bonding, and geometrical constraints imparted by the rigidity of the foldamer backbone. Compared to tartaric acid, binding of 2,2-difluorosuccinic acid or 2,2,3,3-tetrafluorosuccinic acid resulted in symmetry breaking due to deprotonation of only one of the two carboxylic acid groups of the encapsulated species as shown by NMR studies in solution and by single-crystal X-ray diffraction in the solid state. An analogous 14-mer foldamer capsule terminated with a thiol anchoring group was used to probe the complexation event in self-assembled monolayers on Au substrates. Ellipsometry and polarization-modulation infrared absorption-reflection spectroscopy studies were consistent with the formation of a single molecule layer of the foldamer capsule oriented vertically with respect to the surface. The latter underwent smooth complexation of 2,2-difluorosuccinic acid with deprotonation of one of the two carboxylic acid groups. A significant (80-fold) difference in the charge transport properties of the monolayer upon encapsulation of the dicarboxylic acid was evidenced from conducting-AFM measurements (S = 1.1 × 10−9vs. 1.4 × 10−11 ohm−1 for the empty and complexed capsule, respectively). The modulation in conductivity was assigned to protonation of the aromatic foldamer backbone., Conductance through a monolayer of a helical foldamer host was found to vary by 80-fold depending on the presence or the absence of a guest in the host's cavity.
- Published
- 2021
20. Light-mediated chiroptical switching of an achiral foldamer host in presence of a carbohydrate guest
- Author
-
Stefan Hecht, Ivan Huc, Susnata Pramanik, Brice Kauffmann, Yann Ferrand, FERRAND, Yann, Ludwig-Maximilians-Universität München (LMU), Soutien à la Recherche de l'Institut Européen de Chimie Biologique, Université Sciences et Technologies - Bordeaux 1 (UB)-Institut Européen de Chimie et de Biologie-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Humboldt University Of Berlin, Rheinisch-Westfälische Technische Hochschule Aachen University (RWTH), Chimie et Biologie des Membranes et des Nanoobjets (CBMN), Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut Européen de Chimie et de Biologie-Université Sciences et Technologies - Bordeaux 1-Institut de Chimie du CNRS (INC), Humboldt-Universität zu Berlin, Rheinisch-Westfälische Technische Hochschule Aachen (RWTH), and École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
010405 organic chemistry ,Chemistry ,Stereochemistry ,Metals and Alloys ,Foldamer ,General Chemistry ,Carbohydrate ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry ,chemistry.chemical_compound ,[CHIM.THEO] Chemical Sciences/Theoretical and/or physical chemistry ,Diarylethene ,Materials Chemistry ,Ceramics and Composites - Abstract
International audience; A photoresponsive diarylethene was incorporated in an achiral helical foldamer container. A carbohydrate guest was found to induce opposite handedness upon binding to the open and closed forms of the diarylethene-containing foldamer, thus enabling chiroptical switching of an achiral host mediated by a chiral guest.
- Published
- 2021
21. Selective Encapsulation of Disaccharide Xylobiose by an Aromatic Foldamer Helical Capsule
- Author
-
Yann Ferrand, Brice Kauffmann, Subrata Saha, Ivan Huc, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), Institut Européen de Chimie et Biologie (IECB), and Centre National de la Recherche Scientifique (CNRS)-Université de Bordeaux (UB)-Institut National de la Santé et de la Recherche Médicale (INSERM)
- Subjects
Circular dichroism ,Anomer ,010405 organic chemistry ,Chemistry ,Hydrogen bond ,carbohydrates ,Disaccharide ,Foldamer ,[CHIM.MATE]Chemical Sciences/Material chemistry ,General Medicine ,General Chemistry ,Nuclear magnetic resonance spectroscopy ,helical capsules ,010402 general chemistry ,disaccharides ,01 natural sciences ,Catalysis ,0104 chemical sciences ,chemistry.chemical_compound ,Crystallography ,Molecular recognition ,Xylobiose ,foldamers ,molecular recognition - Abstract
Xylobiose sequestration in a helical aromatic oligoamide capsule was evidenced by circular dichroism, NMR spectroscopy, and crystallography. The preparation of the 5 kDa oligoamide sequence was made possible by the transient use of acid-labile dimethoxybenzyl tertiary amide substituents that disrupt helical folding and prevent double helix formation. Binding of other disaccharides was not detected. Crystallographic data revealed a complex composed of a d-xylobiose alpha anomer and two water molecules accommodated in the right-handed helix. The disaccharide was found to adopt an unusual all-axial compact conformation. A dense network of 18 hydrogen bonds forms between the guest, the cavity wall, and the two water molecules.
- Published
- 2018
22. Hyper-Rayleigh Scattering as a New Chiroptical Method: Uncovering the Nonlinear Optical Activity of Aromatic Oligoamide Foldamers
- Author
-
Dominique Verreault, Vincent Rodriguez, Brice Kauffmann, Yann Ferrand, Frédéric Adamietz, Kevin Moreno, Eric Merlet, Céline Olivier, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), and École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
010405 organic chemistry ,Scattering ,Linear polarization ,Chemistry ,Supramolecular chemistry ,General Chemistry ,010402 general chemistry ,Polarization (waves) ,01 natural sciences ,Biochemistry ,Catalysis ,0104 chemical sciences ,symbols.namesake ,Colloid and Surface Chemistry ,Chiral model ,Chemical physics ,Helix ,symbols ,[CHIM]Chemical Sciences ,Enantiomer ,Rayleigh scattering - Abstract
Molecular helices based on self-organized aromatic oligoamide foldamers have been designed and prepared in their two enantiomeric forms in order to probe their second-order nonlinear chiroptical properties in solution. The quinoline oligoamides were rationally functionalized by electron-donating and electron-withdrawing groups to afford a gradual increase of the electronic polarization of the helical architectures. Their hyper-Rayleigh scattering (HRS) responses in solution were accordingly assessed, using either linearly polarized or circularly polarized incident light. Both methods allowed us to observe nonlinear optical activity that was quantified, for the first time for molecular systems, through circular differential scattering intensity ratios. The hyper-Rayleigh optical activity study reveals important charge-transfer differences within the aromatic oligomers, depending on the helix handedness and on the extent of electronic polarization induced by the appended substituents. The origin of the enantiomeric difference is discussed considering both achiral and chiral contributions. Overall, using aromatic oligoamide foldamers as a chiral model, we demonstrate the capabilities of HRS as a complementary chiroptical method, ideally suited for the analysis of various chiral molecular and supramolecular systems in solution. The reliability and chiral discrimination sensitivity of the method can be further improved through dynamic measurements using standard polarization modulation and heterodyning techniques.
- Published
- 2019
23. Frustrierte Helizität: Zusammenführung divergierender Enden einer stabilen aromatischen Amid‐Helix zu einem fluxionalen Makrocyclus
- Author
-
Aya Tanatani, Vojislava Pophristic, Hyuma Masu, Zhiwei Liu, Ivan Huc, Ko Urushibara, and Yann Ferrand
- Subjects
010405 organic chemistry ,Chemistry ,General Medicine ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences - Published
- 2018
24. Designing Helical Molecular Capsules Based on Folded Aromatic Amide Oligomers
- Author
-
Yann Ferrand and Ivan Huc
- Subjects
Molecular Structure ,010405 organic chemistry ,Chemistry ,Ab initio ,Supramolecular chemistry ,Foldamer ,Capsules ,macromolecular substances ,General Medicine ,General Chemistry ,010402 general chemistry ,Amides ,01 natural sciences ,Combinatorial chemistry ,0104 chemical sciences ,chemistry.chemical_compound ,Monomer ,Molecular recognition ,Amide ,Diamine ,Quantum Theory ,Molecule - Abstract
The ab initio rational structure-based design of a synthetic molecular receptor for a given complex biomolecular guest remains an elusive objective, yet remarkable progress has been achieved in recent years. This Account deals with the use of folded artificial aromatic amide oligomers, also termed aromatic foldamers, inspired from biopolymer structures, for the design of helical molecular capsules that can recognize guest molecules, completely surround them, and isolate them from the solvent, thus giving rise to a sort of guest encapsulation associated with slow binding and release kinetics. The development of new amino acid, diacid, and diamine monomers, a main source of creativity in this field, progress in their assembly into ever longer oligoamide sequences, and the predictability of the folded structures due to their inherent rigidity and simple folding principles, allowed for the design and preparation of unimolecular and bimolecular capsule shapes. These capsules consist of molecular helices having a large diameter in the middle and a narrow diameter at both ends thus creating a cavity suitable for binding a guest molecule. The understanding of molecular recognition properties within these bioinspired containers has greatly progressed. Recognition of simple guests such as diols or amino-alcohols may thus be predicted, and hosts can be proposed for guests as complex as saccharides using first principle design. Taking advantage of the modular nature of oligomeric sequences, of their synthetic accessibility and of their propensity to grow into crystals suitable for X-ray crystallographic analysis, a structure-based iterative design methodology has been developed that eventually yielded exquisite guest selectivity, affinity, and diastereoselectivity. This methodology involves rational negative design steps during which changes in the foldamer capsule sequence are not intended to improve binding to the targeted guest but instead to exclude the binding of other guests while preserving key interactions with the target. Metal ions can also be introduced at the inner rim of foldamer capsules and eventually assist the binding of an organic guest. These results demonstrate the viability of an ab initio approach to abiotic receptor design based on aromatic foldamers. The dynamic of the capsules associated with their self-organized nature provides opportunities to not only tune guest binding and selectivity, but also guest capture and release kinetics as well as cavity size and shape. Controlled release thus emerges as a realistic objective. Recent progress thus opens up multiple perspectives for the development of tailored hosts, sensors, and carriers structurally and conceptually different from earlier generations of macrocyclic-based receptors or from supramolecular containers produced by self-assembly.
- Published
- 2018
25. Managing responsiveness in the emergency department: Comparing dynamic priority queue with fast track
- Author
-
Michael J. Magazine, Uday S. Rao, Yann Ferrand, and Todd F. Glass
- Subjects
Service (business) ,Service system ,021103 operations research ,Computer science ,Strategy and Management ,05 social sciences ,0211 other engineering and technologies ,02 engineering and technology ,Variance (accounting) ,Management Science and Operations Research ,Industrial and Manufacturing Engineering ,Emergency Severity Index ,0502 economics and business ,Resource allocation ,Operations management ,Fast track ,Priority queue ,Queue ,050203 business & management - Abstract
Emergency Departments (EDs) commonly face capacity imbalances and long wait times in a service system handling patients with different priorities. These problems are particularly important for low-priority patients who often remain in the queue for extended periods. We investigate two distinct approaches to address these challenges: fast track (FT) and dynamic priority queue (DPQ). Traditionally, EDs have prioritized patients using an Emergency Severity Index (ESI), in conjunction with FT, to strictly or partially dedicate resources to different ESI patient classes. With our proposed DPQ, patients are prioritized using ESI and additional real-time operational information about the patient, specifically the amount of accumulated wait time and flow time. Using an empirical simulation, we compare the impact of different resource allocation and prioritization approaches on patient length of stay (LOS), including the existing system at the ED, FT with strict and partial dedication and the possibility of shorter and less variable service times, and versions of the proposed DPQ using simple dynamic prioritization. Our main results are that: (i) the DPQ approach dominates the other approaches tested; (ii) for various ED sizes, FT with strict and partial dedication do not reduce average LOS of low-priority patients without significantly increasing average LOS of high-priority patients, unless service time mean and variance are reduced; (iii) DPQ using accumulated wait time or accumulated flow time improves performance. The results are robust to changes in the proportion of patients in each priority level. Overall, expanding decision making about patient prioritization from only considering the patient's clinical condition to also including operational data can improve performance dramatically, even without improved service times.
- Published
- 2018
26. Controlling Dipole Orientation through Curvature: Aromatic Foldamer Bent β-Sheets and Helix–Sheet–Helix Architectures
- Author
-
Laure Sebaoun, Barbara Wicher, Yann Ferrand, Arthur Lamouroux, Victor Maurizot, Brice Kauffmann, Ivan Huc, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), Institut Européen de Chimie et Biologie (IECB), Université de Bordeaux (UB)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), and Centre National de la Recherche Scientifique (CNRS)-Université de Bordeaux (UB)-Institut National de la Santé et de la Recherche Médicale (INSERM)
- Subjects
[CHIM.ORGA]Chemical Sciences/Organic chemistry ,010405 organic chemistry ,Chemistry ,Aryl ,Bent molecular geometry ,Foldamer ,General Chemistry ,010402 general chemistry ,Curvature ,01 natural sciences ,Biochemistry ,Catalysis ,0104 chemical sciences ,Turn (biochemistry) ,Folding (chemistry) ,Crystallography ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,Intramolecular force ,Helix - Abstract
International audience; The helix, turn and beta-strand motifs of biopolymer folded structures have been found to prevail also in non-natural backbones. In contrast, foldamers with aryl rings in their main chains possess distinct conformations that may give access to folded objects beyond the reach of peptidic and nucleotidic backbones. In search for such original architectures we have explored the effect of bending aromatic amide beta-sheets using building blocks that impart curvature. Cyclic and multi-turn noncyclic sequences were synthesized and their structures were characterized in solution and in the solid state. Stable bent-sheet conformations were shown to prevail in chlorinated solvents. In these structures, folding overcomes intramolecular electrostatic repulsions and forces local dipoles in each layer of the stacked strands to align in a parallel fashion. Sequences having helical segments flanking a central bent aromatic beta-sheet were then synthesized and shown to form well-defined helix-turn-helix architectures in which helical and sheet sub-components conserve their respective integrity. These objects have a unique basket shape; they possess a cavity the depth and width of which reflects the curvature of the beta-sheet segment. They can be compared to previously described helical closed-shell receptors in which a window has been open thus providing a means to control guest binding and release pathways and kinetics. As a proof of concept, guest binding to one of the helix-sheet-helix structure is indeed found to be fast on the NMR time scale while it is generally slow in the case of helical capsules.
- Published
- 2017
27. Aromatic oligoamide foldamers as versatile scaffolds for induced circularly polarized luminescence at adjustable wavelengths
- Author
-
Arnaud Tron, Nathan D. McClenaghan, Yann Ferrand, Céline Olivier, Eric Merlet, Brice Kauffmann, Kevin Moreno, Institut des Sciences Moléculaires (ISM), Université Montesquieu - Bordeaux 4-Université Sciences et Technologies - Bordeaux 1-École Nationale Supérieure de Chimie et de Physique de Bordeaux (ENSCPB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Institut Européen de Chimie et Biologie (IECB), Centre National de la Recherche Scientifique (CNRS)-Université de Bordeaux (UB)-Institut National de la Santé et de la Recherche Médicale (INSERM), Chimie et Biologie des Membranes et des Nanoobjets (CBMN), and École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Materials science ,010405 organic chemistry ,[CHIM.ORGA]Chemical Sciences/Organic chemistry ,Quinoline ,Metals and Alloys ,General Chemistry ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Wavelength ,chemistry.chemical_compound ,chemistry ,Materials Chemistry ,Ceramics and Composites ,Visible range ,[CHIM]Chemical Sciences ,Luminescence - Abstract
International audience; Quinoline oligoamide foldamers appended with non-chiral fluorophores and derivatized with a camphanyl chiral inducer display strong chiroptical properties at tunable wavelengths as proved by CD and CPL spectroscopies. Induced CPL activity with high luminescence dissymmetry factors was observed in the visible range at wavelengths specific to the fluorophores.
- Published
- 2019
28. Light-Controlled Conformational Switch of an Aromatic Oligoamide Foldamer
- Author
-
Brice Kauffmann, Ivan Huc, Yann Ferrand, Victor Maurizot, Bappaditya Gole, Institut Européen de Chimie et Biologie (IECB), Centre National de la Recherche Scientifique (CNRS)-Université de Bordeaux (UB)-Institut National de la Santé et de la Recherche Médicale (INSERM), Chimie et Biologie des Membranes et des Nanoobjets (CBMN), École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), Institut Européen de Chimie et Biologie, and Institut Européen de Chimie et de Biologie
- Subjects
Molekulare Schalter ,Oligomere ,Sequence (biology) ,010402 general chemistry ,01 natural sciences ,Catalysis ,Light responsive ,[CHIM.CRIS]Chemical Sciences/Cristallography ,[CHIM]Chemical Sciences ,Foldamere ,Conformational isomerism ,Röntgenkristallographie ,Molecular switch ,Chemistry ,010405 organic chemistry ,[CHIM.ORGA]Chemical Sciences/Organic chemistry ,Foldamer ,General Chemistry ,[CHIM.MATE]Chemical Sciences/Material chemistry ,General Medicine ,Cycloaddition ,0104 chemical sciences ,Crystallography ,Helix ,X-ray crystallography ,Photochemie - Abstract
International audience; We have investigated the conformation control of a foldamer switch by light. An aromatic oligoamide sequence composed of a light responsive diazaanthracene-based aromatic -sheet flanked by two variable diameter helical segments was prepared. Structural investigations revealed that such oligomers adopt two distinct conformations: a canonical symmetrical conformation with the two helices stacked above and below the sheet, and an unanticipated unsymmetrical conformation in which one helix has flipped to directly stack with the first helix. Photo-irradiation of the foldamer led to the quantitative, and thermally reversible, formation of a single photo-product resulting from the [4+4] cycloaddition of two diazaanthracenes within the aromatic -sheet. NMR and crystallographic studies revealed a parallel (i.e. head-to-head) arrangement of the diazaanthracene photoproduct and a complete conversion to a symmetrical conformation requiring a rearrangement of all unsymmetrical conformers. These results highlight the potential of foldamers with structures more complex that isolated helices for the design of photo-switches showing nontrivial nanometer scale shape changes.
- Published
- 2019
29. Directional Threading and Sliding of a Dissymmetrical Foldamer Helix on Dissymmetrical Axles
- Author
-
Xiang Wang, Ivan Huc, Barbara Wicher, Quan Gan, Yann Ferrand, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Poznan University of Medical Sciences [Poland] (PUMS), Center for Integrated Protein Science (CIPSM), Technische Universität Munchen - Université Technique de Munich [Munich, Allemagne] (TUM)-Helmholtz-Zentrum München (HZM)-Ludwig Maximilian University of Munich [Germany] (LMU München), and Université Sciences et Technologies - Bordeaux 1-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Materials science ,010405 organic chemistry ,Supramolecular chemistry ,Foldamer ,molecular shuttle ,General Medicine ,General Chemistry ,[CHIM.MATE]Chemical Sciences/Material chemistry ,[CHIM.INOR]Chemical Sciences/Inorganic chemistry ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Crystallography ,Molecular recognition ,Wrap around ,Proton NMR ,Molecule ,[CHIM]Chemical Sciences ,foldaxane ,Dumbbell ,molecular recognition ,Threading (protein sequence) ,directional motion - Abstract
International audience; We have investigated the self-assembly of a dissymmetrical aromatic oligoamide helix on linear amido-carbamate rods. A dissymmetric sequence bearing two differentiated ends is able to wrap around dissymmetric dumbbell guest molecules. Structural and thermodynamic investigations allowed us to decipher the mode of binding of the helix that can bind specifically to the amide and carbamate groups of the rod. In parallel kinetic studies of threading and sliding of the helix along linear axles were also monitored by 1 H NMR. Results show that threading of a dissymmetrical host can be kinetically biased by the nature of the guest terminus allowing a preferential sense of sliding of the helix. The study presented below further demonstrates the valuable potential of foldaxanes to combine designed molecular recognition patterns with fine control of self-assembly kinetics to conceive complex supramolecular events.
- Published
- 2019
30. Innentitelbild: Interplay between a Foldamer Helix and a Macrocycle in a Foldarotaxane Architecture (Angew. Chem. 15/2021)
- Author
-
Brice Kauffmann, Ivan Huc, Caroline Clavel, Frédéric Coutrot, Victor Koehler, Maxime Gauthier, and Yann Ferrand
- Subjects
Crystallography ,Chemistry ,Helix ,Foldamer ,Molecular motion ,General Medicine - Published
- 2021
31. Membranes prime the RapGEF EPAC1 to transduce cAMP signaling
- Author
-
Candice Sartre, François Peurois, Marie Ley, Marie-Hélène Kryszke, Wenhua Zhang, Delphine Courilleau, Rodolphe Fischmeister, Yves Ambroise, Mahel Zeghouf, Sarah Cianferani, Yann Ferrandez, and Jacqueline Cherfils
- Subjects
Science - Abstract
Abstract EPAC1, a cAMP-activated GEF for Rap GTPases, is a major transducer of cAMP signaling and a therapeutic target in cardiac diseases. The recent discovery that cAMP is compartmentalized in membrane-proximal nanodomains challenged the current model of EPAC1 activation in the cytosol. Here, we discover that anionic membranes are a major component of EPAC1 activation. We find that anionic membranes activate EPAC1 independently of cAMP, increase its affinity for cAMP by two orders of magnitude, and synergize with cAMP to yield maximal GEF activity. In the cell cytosol, where cAMP concentration is low, EPAC1 must thus be primed by membranes to bind cAMP. Examination of the cell-active chemical CE3F4 in this framework further reveals that it targets only fully activated EPAC1. Together, our findings reformulate previous concepts of cAMP signaling through EPAC proteins, with important implications for drug discovery.
- Published
- 2023
- Full Text
- View/download PDF
32. Patient Satisfaction With Healthcare Services A Critical Review
- Author
-
Yunsik Choi, Lawrence D. Fredendall, Matthew Bitner, Yann Ferrand, Jennifer Christie Siemens, Danny Weathers, and Ronald G. Pirrallo
- Subjects
Service quality ,Customer retention ,Financial performance ,business.industry ,030503 health policy & services ,05 social sciences ,Customer relationship management ,General Business, Management and Accounting ,InformationSystems_GENERAL ,03 medical and health sciences ,Customer advocacy ,Patient satisfaction ,0502 economics and business ,Health care ,Customer satisfaction ,InformationSystems_MISCELLANEOUS ,Marketing ,0305 other medical science ,business ,050203 business & management - Abstract
As healthcare systems shift from fee-for-service to alternate payment models, and consumers gain access to more healthcare options, patient satisfaction is becoming increasingly important for the financial performance of healthcare providers and for pat..
- Published
- 2016
33. The Influence of Traffic, Area Location, and Other Factors on Operating Room Microbial Load
- Author
-
Brandon Byunghwan Lee, Kevin Taaffe, Amin Khoshkenar, Scott Reeves, Lawrence D. Fredendall, Dotan Shvorin, Dee San, Cassandra D. Salgado, and Yann Ferrand
- Subjects
Microbiology (medical) ,South carolina ,Hydrology ,Academic Medical Centers ,Infection Control ,Operating Rooms ,Risk Management ,Epidemiology ,South Carolina ,Air Microbiology ,Colony Count, Microbial ,Sampling (statistics) ,030501 epidemiology ,03 medical and health sciences ,0302 clinical medicine ,Infectious Diseases ,Colony count ,Environmental science ,Humans ,Surgical Wound Infection ,Statistical analysis ,030212 general & internal medicine ,0305 other medical science ,Surgical site infection - Abstract
OBJECTIVETo determine how the movement of patients, equipment, materials, staff, and door openings within the operating room (OR) affect microbial loads at various locations within the OR.DESIGNObservation and sampling study.SETTINGAcademic health center, public hospital.METHODSWe first analyzed 27 videotaped procedures to determine the areas in the OR with high and low numbers of people in transit. We then placed air samplers and settle plates in representative locations during 21 procedures in 4 different ORs during 2 different seasons of the year to measure microbial load in colony-forming units (CFU). The temperature and humidity, number of door openings, physical movement, and the number of people in the OR were measured for each procedure. Statistical analysis was conducted using hierarchical regression.RESULTSThe microbial load was affected by the time of year that the samples were taken. Both microbial load measured by the air samplers and by settle plates in 1 area of the OR was correlated with the physical movement of people in the same area but not with the number of door openings and the number of people in the OR.CONCLUSIONSMovement in the OR is correlated with the microbial load. Establishing operational guidelines or developing OR layouts that focus on minimizing movement by incorporating desirable internal storage points and workstations can potentially reduce microbial load, thereby potentially reducing surgical site infection risk.Infect Control Hosp Epidemiol 2018;39:391–397
- Published
- 2018
34. Carbohydrate binding through first- and second-sphere coordination within aromatic oligoamide metallofoldamers
- Author
-
Ivan Huc, Pedro Mateus, Barbara Wicher, Yann Ferrand, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), and Ludwig-Maximilians-Universität München (LMU)
- Subjects
010405 organic chemistry ,Metal binding ,Chemistry ,Metal ions in aqueous solution ,Metals and Alloys ,Crystallographic data ,General Chemistry ,macromolecular substances ,Carbohydrate ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Crystallography ,Materials Chemistry ,Ceramics and Composites ,Titration ,[CHIM.COOR]Chemical Sciences/Coordination chemistry - Abstract
International audience; Aromatic oligoamide capsules that fold upon metal binding recognize carbohydrate guests in solution as evidenced by CD and NMR titrations. Crystallographic data reveals that, besides their structural role, metal ions also contribute to guest recognition through either first-or second-sphere coordination.
- Published
- 2018
35. Angew.Chem.Int
- Author
-
Hyuma Masu, Ivan Huc, Ko Urushibara, Aya Tanatani, Vojislava Pophristic, Yann Ferrand, Zhiwei Liu, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), and École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
010405 organic chemistry ,Chemistry ,Degenerate energy levels ,General Chemistry ,[CHIM.MATE]Chemical Sciences/Material chemistry ,010402 general chemistry ,01 natural sciences ,Helicity ,Catalysis ,0104 chemical sciences ,3. Good health ,Crystallography ,chemistry.chemical_compound ,Amide ,Helix ,Peptide bond - Abstract
Macrocyclization of a stable two-turn helical aromatic pentamide, that is, an object with diverging ends that are not prone to cyclization, was made possible by the transient introduction of disruptors of helicity in the form of acid-labile dimethoxybenzyl tertiary amide substituents. After removal of the helicity disruptors, NMR, X-ray crystallography, and computational studies show that the macrocycle possesses a strained structure that tries to gain as high a helical content as possible despite being cyclic. Two points of disruption of helicity remain, in particular a cis amide bond. This point of disruption of helicity can propagate along the cycle in a fluxional manner according to defined trajectories to produce ten degenerate conformations.
- Published
- 2018
36. Simulation-Based Design of ED Operations with Care Streams to Optimize Care Delivery and Reduce Length of Stay in the Emergency Department
- Author
-
Duane Steward, Todd F. Glass, and Yann Ferrand
- Subjects
020205 medical informatics ,Operations research ,Medicine (miscellaneous) ,Health Informatics ,02 engineering and technology ,Health informatics ,Workflow ,03 medical and health sciences ,0302 clinical medicine ,Health Information Management ,030225 pediatrics ,0202 electrical engineering, electronic engineering, information engineering ,Medicine ,Operations management ,Structure (mathematical logic) ,business.industry ,Emergency department ,Length of Stay ,Process logic ,Systems design ,Simulation based design ,Fast track ,Emergency Service, Hospital ,business ,Information Systems - Abstract
Faced with the opportunity to significantly deviate from classic operations, a new emergency department (ED) and novel strategy for patient care delivery were simultaneously initiated with the aid of model-based simulation. To answer the design and implementation questions, a traditional strategy for construction of discrete-eventmodel simulation was employed to define ED operations for a newly constructed facility in terms of workflow, variables, resources, structure, process logic and associated assumptions. Benefits were achieved before, during and after implementation of an unprecedented operations strategy-i.e., the organization of the ED care delivery around four care streams: Critical, Diagnostic, Therapeutic and Fast Track. Prior to opening, it shed light on the range of context variables where benefits might be anticipated, and it facilitated staff understanding and judgements of performance. Two years after opening, the operations data is compared to the simulation with encouraging results that shed light on where to continue pursuit of improvement.
- Published
- 2017
37. Comparative Effectiveness of Tacrolimus-Based Steroid Sparing versus Steroid Maintenance Regimens in Kidney Transplantation: Results from Discrete Event Simulation
- Author
-
J. Jaime Caro, Pamela C. Heaton, Christina M.L. Kelton, Teresa M. Cavanaugh, Jens Goebel, Yann Ferrand, and Vibha C. A. Desai
- Subjects
Adult ,Graft Rejection ,Male ,medicine.medical_specialty ,Adolescent ,Databases, Factual ,medicine.medical_treatment ,Population ,030232 urology & nephrology ,030230 surgery ,Tacrolimus ,law.invention ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Randomized controlled trial ,law ,Internal medicine ,Medicine ,Humans ,Computer Simulation ,Adverse effect ,education ,Stroke ,Kidney transplantation ,Aged ,education.field_of_study ,business.industry ,Health Policy ,Immunosuppression ,Middle Aged ,medicine.disease ,Decision Support Systems, Clinical ,Kidney Transplantation ,United States ,Surgery ,Regimen ,Cardiovascular Diseases ,Regression Analysis ,Female ,Steroids ,business ,Immunosuppressive Agents - Abstract
Background. Corticosteroids used as immunosuppressants to prevent acute rejection (AR) and graft loss (GL) following kidney transplantation are associated with serious cardiovascular and other adverse events. Evidence from short-term randomized controlled trials suggests that many patients on a tacrolimus-based immunosuppressant regimen can withdraw from steroids without increased AR or GL risk. Objectives. To measure the long-term tradeoff between GL and adverse events for a heterogeneous-risk population and determine the optimal timing of steroid withdrawal. Methods. A discrete event simulation was developed including, as events, AR, GL, myocardial infarction (MI), stroke, cytomegalovirus, and new onset diabetes mellitus (NODM), among others. Data from the United States Renal Data System were used to estimate event-specific parametric regressions, which accounted for steroid-sparing regimen (avoidance, early 7-d withdrawal, 6-mo withdrawal, 12-mo withdrawal, and maintenance) as well as patients’ demographics, immunologic risks, and comorbidities. Regression-equation results were used to derive individual time-to-event Weibull distributions, used, in turn, to simulate the course of patients over 20 y. Results. Patients on steroid avoidance or an early-withdrawal regimen were more likely to experience AR (45.9% to 55.0% v. 33.6%, P < 0.05) and GL (51.5% to 68.8% v. 37.8%, P < 0.05) compared to patients on steroid maintenance. Patients in 6-mo and 12-mo steroid withdrawal groups were less likely to experience MI (11.1% v. 13.3%, P < 0.05), NODM (30.7% to 34.4% v. 37.7%, P < 0.05), and cardiac death (29.9% to 30.5% v. 32.4%, P < 0.05), compared to steroid maintenance. Conclusions. Strategies of 6- and 12-mo steroid withdrawal post-kidney transplantation are expected to reduce the rates of adverse cardiovascular events and other outcomes with no worsening of AR or GL rates compared with steroid maintenance.
- Published
- 2017
38. Metal-Coordination-Assisted Folding and Guest Binding in Helical Aromatic Oligoamide Molecular Capsules
- Author
-
Barbara Wicher, Guillaume Lautrette, Virginie Blot, Jacques Lebreton, Muriel Pipelier, Ivan Huc, Didier Dubreuil, Maxime Horeau, Yann Ferrand, Chimie Et Interdisciplinarité : Synthèse, Analyse, Modélisation (CEISAM), Université de Nantes - UFR des Sciences et des Techniques (UN UFR ST), Université de Nantes (UN)-Université de Nantes (UN)-Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC), Chimie et Biologie des Membranes et des Nanoobjets (CBMN), École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), and Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Coordination sphere ,Metal ions in aqueous solution ,Sequence (biology) ,010402 general chemistry ,01 natural sciences ,Catalysis ,Metal ,chemistry.chemical_compound ,Metallkoordination ,Polymer chemistry ,[CHIM]Chemical Sciences ,Foldamere ,Molekulare Erkennung ,Helikale Konformationen ,010405 organic chemistry ,Foldamer ,General Medicine ,General Chemistry ,Wirt-Gast-Chemie ,0104 chemical sciences ,Folding (chemistry) ,Monomer ,chemistry ,visual_art ,Helix ,visual_art.visual_art_medium - Abstract
International audience; The development of foldamer-based receptors is driven by the design of monomers with specific properties. Herein, we introduce a pyridazine-pyridine-pyridazine diacid monomer and its incorporation into helical aromatic oligoamide foldamer containers. This monomer codes for a wide helix diameter and can sequester metal ions on the inner wall of the helix cavity. Crystallographic studies and NMR titrations show that part of the metal coordination sphere remains available and may then promote the binding of a guest within the cavity. In addition to metal coordination, binding of the guest is assisted by cooperative interactions with the helix host, thereby resulting in significant enhancements depending on the foldamer sequence, and in slow guest capture and release on the NMR time scale. In the absence of metal ions, the pyridazine-pyridine-pyridazine monomer promotes an extended conformation of the foldamer that results in aggregation, including the formation of an intertwined duplex
- Published
- 2017
39. Orchestrating Directional Molecular Motions: Kinetically Controlled Supramolecular Pathways of a Helical Host on Rodlike Guests
- Author
-
Ivan Huc, Barbara Wicher, Yann Ferrand, Xiang Wang, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), and Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
double helix ,Stereochemistry ,Supramolecular chemistry ,molecular shuttle ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Catalysis ,Dissociation (chemistry) ,supramolecular pathways ,pseudo-rotaxane ,Colloid and Surface Chemistry ,foldamer ,Molecular motion ,[CHIM]Chemical Sciences ,foldaxane ,directional motion ,Alkyl ,Stable state ,chemistry.chemical_classification ,010405 organic chemistry ,Chemistry ,General Chemistry ,dynamic self-assembly ,Affinities ,0104 chemical sciences ,Crystallography ,Proton NMR ,molecular recognition - Abstract
International audience; An aromatic oligoamide sequence was designed to fold and self-assemble into a double helical host having a cylindrical cavity complementary to linear oligo–carbamates guests. Formation of helical pseudo–rotaxane complexes – foldaxanes – between the host and guests having binding stations of different affinities was evidenced by NMR and x-ray crystallography. Rod-like guests possessing two or three binding stations, long alkyl or oligoethylene glycol spacers or bulky barriers in-between the binding stations, and a single bulky stopper at one end, were synthesized. Kinetic investigations of the threading and translation of the double helix along multistation rods were monitored by 1 H NMR. Results show that multiple events may occur upon sliding of the host from the non-bulky end of the rod to reach the thermodynamically most stable state before unfolding-mediated dissociation has time to take place, including binding on intermediate stations and rapid sliding along non-binding spacers. Conversely, installing a kinetic barrier that blocks sliding allows for the deliberate integration of a helix dissociation re-association step in the supramolecular trajectory. Typical sliding processes can be monitored over the course of hours whereas steps involving unwinding/rewinding of the helix proceeded over the course of days. These results further demonstrate the interest of foldaxanes to design complex sequences of supramolecular events within networks of equilibria through the adjustment of the kinetics of the individual steps involved.
- Published
- 2017
40. Alkali and alkaline earth metal ion binding by a foldamer capsule: selective recognition of magnesium hydrate
- Author
-
Pedro Mateus, Barbara Wicher, Yann Ferrand, Ivan Huc, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), and École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Alkaline earth metal ,010405 organic chemistry ,Chemistry ,Inorganic chemistry ,Metals and Alloys ,Foldamer ,Capsule ,General Chemistry ,010402 general chemistry ,Alkali metal ,01 natural sciences ,Catalysis ,0104 chemical sciences ,3. Good health ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Metal ,Folding (chemistry) ,Ion binding ,visual_art ,Materials Chemistry ,Ceramics and Composites ,visual_art.visual_art_medium ,[CHIM.COOR]Chemical Sciences/Coordination chemistry ,Titration - Abstract
International audience; Alkali and alkaline earth metal ion binding by an aromatic oligoamide foldamer was shown to induce its folding into a helical capsule. CD and NMR titrations revealed tight and selective binding of Mg 2+. Crystallographic studies demonstrated that, depending on the metal, binding may involve the first or second coordination spheres of the metal hydrates.
- Published
- 2017
41. Increasing the Size of an Aromatic Helical Foldamer Cavity by Strand Intercalation
- Author
-
Ivan Huc, Michael L. Singleton, Yann Ferrand, Brice Kauffmann, and Geert Pirotte
- Subjects
Models, Molecular ,Crystallography ,Chemistry ,Stereochemistry ,Macromolecular Substances ,Intercalation (chemistry) ,Supramolecular chemistry ,Foldamer ,Molecular Conformation ,Sequence (biology) ,Hydrogen Bonding ,General Chemistry ,General Medicine ,Catalysis ,Intercalating Agents ,chemistry.chemical_compound ,Monomer ,Helix ,Alpha helix - Abstract
The postsynthetic modulation of capsules based on helical aromatic oligoamide foldamers would be a powerful approach for controlling their receptor properties without altering the initial monomer sequences. With the goal of developing a method to increase the size of a cavity within a helix, a single-helical foldamer capsule was synthesized with a wide-diameter central segment that was designed to intercalate with a second shorter helical strand. Despite the formation of stable double-helical homodimers (K(dim)10(7) M(-1)) by the shorter strand, when it was mixed with the single-helical capsule sequence, a cross-hybridized double helix was formed with K(a)10(5) M(-1). This strategy makes it possible to direct the formation of double-helical heterodimers. On the basis of solution- and solid-state structural data, this intercalation resulted in an increase in the central-cavity size to give a new interior volume of approximately 150 Å(3).
- Published
- 2014
42. Partially Flexible Operating Rooms for Elective and Emergency Surgeries
- Author
-
Michael J. Magazine, Uday S. Rao, and Yann Ferrand
- Subjects
Prioritization ,Flexibility (engineering) ,Schedule ,Focus (computing) ,Information Systems and Management ,Computer science ,Management of Technology and Innovation ,Strategy and Management ,Resource allocation ,Operations management ,Workload ,General Business, Management and Accounting ,Wait time - Abstract
In hospitals, the management of operating rooms faces a trade-off between the need to be responsive to emergency surgeries and to conduct scheduled elective surgeries efficiently. Operating rooms can be configured as flexible and handle both electives and emergencies, or as dedicated to focus on either electives or emergencies. With flexible rooms, the prioritization of emergencies over scheduled electives can lead to schedule disruptions. Focused rooms can lead to imbalances between capacity and surgery workload. Whereas hospital administrators typically handle this trade-off by employing either flexible rooms (complete flexibility) or dedicated rooms (complete focus), we investigate whether a combination of flexible and dedicated rooms (partial flexibility) could be a preferable alternative. The ensuing question is what is the right combination of flexible and dedicated rooms? A versatile simulation model is developed to evaluate different resource allocation policies under various environmental parameters and performance metrics, including patient wait time, staff overtime, and operating room utilization. The main result is that partial flexibility configurations outperform both complete flexibility and complete focus policies by providing solutions with improved values of expected wait time for both emergency and elective patients.
- Published
- 2014
43. Managing operating room efficiency and responsiveness for emergency and elective surgeries—A literature survey
- Author
-
Michael J. Magazine, Uday S. Rao, and Yann Ferrand
- Subjects
business.industry ,Public Health, Environmental and Occupational Health ,Resource allocation ,Medicine ,Research questions ,Operations management ,Safety, Risk, Reliability and Quality ,Literature survey ,business ,Safety Research ,Health administration - Abstract
This paper provides a review and classification of the state of research on the question of how a hospital can best utilize its operating rooms (ORs) to balance efficiency and responsiveness when performing surgeries on scheduled electives and high-priority emergencies. We first provide an overview of the specific research questions and conclusions in the literature, as well as a synthesis of the different types of approaches. Then we classify these approaches by methodology and performance measures considered. We also extend the review to other application domains that face a similar question, and highlight similarities and differences to identify potential learning points that apply to the surgery setting. We anticipate this survey highlights the need for future quantitative research that improves the balance of efficiency and responsiveness in the OR.
- Published
- 2014
44. Citric acid encapsulation by a double helical foldamer in competitive solvents
- Author
-
Ivan Huc, Yann Ferrand, Nagula Chandramouli, and Brice Kauffmann
- Subjects
010405 organic chemistry ,Stereochemistry ,Functional features ,Metals and Alloys ,Foldamer ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,chemistry.chemical_compound ,chemistry ,Polymer chemistry ,Materials Chemistry ,Ceramics and Composites ,Aromatic amino acids ,Citric acid - Abstract
A new double helical aromatic oligoamide capsule able to bind to citric acid in polar and protic solvents was prepared. Aromatic amino acids in the sequence encode both structural (strand curvature and double helix formation) and functional features (recognition pattern) of the assembled capsule.
- Published
- 2016
45. Crystal structure of a complex between β-glucopyranose and a macrocyclic receptor with dendritic multicharged water solubilizing chains
- Author
-
Yann Ferrand, Anthony P. Davis, Harry Destecroix, Ivan Huc, Brice Kauffmann, Pradeep K. Mandal, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), School of Chemistry [Bristol], and University of Bristol [Bristol]
- Subjects
Macrocyclic Compounds ,Racemic crystallography ,Crystal structure ,Crystallography, X-Ray ,010402 general chemistry ,01 natural sciences ,Catalysis ,law.invention ,law ,Materials Chemistry ,[CHIM.CRIS]Chemical Sciences/Cristallography ,Monosaccharide ,Molecule ,Crystallization ,Solubility ,chemistry.chemical_classification ,Molecular Structure ,010405 organic chemistry ,Biomolecule ,Monosaccharides ,Resolution (electron density) ,Metals and Alloys ,Water ,General Chemistry ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Crystallography ,chemistry ,Ceramics and Composites - Abstract
International audience; Using commercial screens for crystallization of biomolecules and taking advantage of the use of racemic crystallography allowed the production of x-ray quality single crystals and the elucidation at 1.08 Å resolution of the solid state structure of a difficult target: the complex between glucopyranose and a water soluble macrocyclic receptor equipped with dendritic multianionic solubilizing chains.
- Published
- 2016
46. Polar solvent effects on tartaric acid binding by aromatic oligoamide foldamer capsules
- Author
-
Ivan Huc, Mohammed Farrag El-Behairy, Nagula Chandramouli, Yann Ferrand, Guillaume Lautrette, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), and Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Entropy ,Proton Magnetic Resonance Spectroscopy ,Capsules ,010402 general chemistry ,01 natural sciences ,Biochemistry ,chemistry.chemical_compound ,Side chain ,Organic chemistry ,[CHIM]Chemical Sciences ,Dimethyl Sulfoxide ,Physical and Theoretical Chemistry ,Tartrates ,Chloroform ,Binding Sites ,Molecular Structure ,010405 organic chemistry ,Methanol ,Organic Chemistry ,Foldamer ,Water ,Amides ,0104 chemical sciences ,Solvent ,chemistry ,Proton NMR ,Tartaric acid ,Solvents ,Solvent effects - Abstract
International audience; Aromatic oligoamide sequences able to fold into single helical capsules were functionalized with two types of side chains to make them be soluble in various solvents such as chloroform, methanol or water and their propensity to recognize tartaric acid was evaluated. Binding affinities to tartaric acid and binding thermodynamics in the different media were investigated by variable temperature 1 H NMR and ITC experiments, the two methods giving consistent results. We show that tartaric acid binding mainly rests on enthalpically favourable polar interactions that were found to be sufficiently strong to be effective in presence of a polar aprotic solvent (DMSO) and even in pure methanol. Binding in water was very low. The stronger binding interactions were found to be more susceptible to the effect of competitive solvents and to be compensated by unfavourable entropic effects. Thus, the best host in less polar medium eventually was found to be the worst host in protic solvents. An interesting case of entropically driven binding was evidenced in methanol.
- Published
- 2016
47. Iterative Evolution of an Abiotic Foldamer Sequence for the Recognition of Guest Molecules with Atomic Precision
- Author
-
Ivan Huc, Yann Ferrand, Guillaume Lautrette, Barbara Wicher, Brice Kauffmann, Chimie et Biologie des Membranes et des Nanoobjets (CBMN), and Université de Bordeaux (UB)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Stereochemistry ,helical capsule ,malic acid ,Sequence (biology) ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Catalysis ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,Molecular recognition ,foldamer ,Molecule ,[CHIM]Chemical Sciences ,cir- cular dichroism ,x-ray crystallography ,010405 organic chemistry ,Chemistry ,Hydrogen bond ,Foldamer ,General Chemistry ,NMR ,0104 chemical sciences ,tartaric acid ,Tartaric acid ,Malic acid ,molecular recognition ,Selectivity - Abstract
International audience; A synthetic helical aromatic oligoamide foldamer receptor with high affinity and selectivity for tartaric acid was subjected to a structure-based evolution of its sequence via mutations, additions and deletions of monomers to produce a new receptor having high affinity and selectivity for malic acid, a guest that differs from tartaric acid by a single oxygen atom. Seven iteratively modified sequences were synthesized. Detailed structural investigations of host-guest complexes were carried out systematically to guide the design of the next generation. A first outcome was a reversal of selectivity of the receptors, with a starting preference for tartaric acid over malic acid of over 10 2 and an ending sequence showing a preference for malic acid over tartaric acid of over 10 2. Another outcome was a very strong enhancement of the affinity for malic acid, despite the fact it has fewer recognition features for binding through polar interactions such as hydrogen bonds. Such level of discrimination between very much resembling guests exemplifies the amenability of foldamers to outstanding achievements in molecular recognition. Altogether, our results demonstrate the viability of a rational receptor design approach that exploits the modularity of foldamer sequences and, in the case of aromatic amide foldamers, their amenability to structural elucidation, their relative ease of synthesis and the predictability of their structure.
- Published
- 2016
48. Identification of a Foldaxane Kinetic Byproduct during Guest-Induced Single to Double Helix Conversion
- Author
-
Quan Gan, Yann Ferrand, Nagula Chandramouli, Brice Kauffmann, Didier Dubreuil, Ivan Huc, and Christophe Aube
- Subjects
Circular dichroism ,Molecular model ,Stereochemistry ,Circular Dichroism ,Molecular Conformation ,Supramolecular chemistry ,macromolecular substances ,General Chemistry ,Kinetic energy ,Biochemistry ,Catalysis ,Kinetics ,chemistry.chemical_compound ,Crystallography ,Colloid and Surface Chemistry ,chemistry ,Tartaric acid ,Molecule ,Nuclear Magnetic Resonance, Biomolecular - Abstract
An aromatic oligoamide sequence was designed and synthesized to fold in a single helix having a large cavity and to behave as a host for a dumbbell-shaped guest derived from tartaric acid. NMR, molecular modeling, and circular dichroism (CD) evidence demonstrated the rapid formation of this 1:1 host-guest complex and induction of the helix handedness of the host by the guest. This complex was found to be a long-lived kinetic supramolecular byproduct, as it slowly transformed into a 2:2 host-guest complex with two guest molecules bound at the extremities of a double helix formed by the host, as shown by NMR and CD spectroscopy and a solid-state structure. The guest also induced the handedness of the double helical host, but with an opposite bias. The chiroptical properties of the system were thus found to revert with time as the 1:1 complex formed first, followed by the 2:2 complex.
- Published
- 2012
49. Building Cyclic Schedules for Emergency Department Physicians
- Author
-
Uday S. Rao, Todd F. Glass, Yann Ferrand, and Michael J. Magazine
- Subjects
Schedule ,Computer science ,business.industry ,Strategy and Management ,media_common.quotation_subject ,Emergency department ,Management Science and Operations Research ,Work (electrical) ,Management of Technology and Innovation ,Health care ,Operations management ,Quality (business) ,business ,Integer programming ,media_common - Abstract
Physicians at a branch of the emergency department at Cincinnati Children's Hospital Medical Center complained that their schedules were too erratic because of the multitude of operating requirements, regulatory constraints, physician preferences, and holiday requests. We addressed this issue by using integer programming to build cyclic schedules that can be repeated throughout the year. These schedules are flexible enough to handle incorporating holidays, work assignments, and vacation requests ex post. After we rolled out the calendar-year-based cyclic schedule, we captured statistics to assess the viability and the quality of the yearly schedule generated. Surveys of the physicians and the scheduler after implementation showed that the new schedule provides predictability and well-balanced work patterns.
- Published
- 2011
50. Template-Induced Screw Motions within an Aromatic Amide Foldamer Double Helix
- Author
-
Ivan Huc, Hua Jiang, Yann Ferrand, Quan Gan, and Brice Kauffmann
- Subjects
chemistry.chemical_compound ,Rotaxane ,chemistry ,Amide ,Helix ,X-ray crystallography ,Polymer chemistry ,Supramolecular chemistry ,Foldamer ,General Medicine ,General Chemistry ,Catalysis - Published
- 2011
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.