5 results on '"Yan Yuan, Tan"'
Search Results
2. Prediction of in-hospital mortality of
- Author
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Hao, Du, Kewin Tien Ho, Siah, Valencia Zhang, Ru-Yan, Readon, Teh, Christopher Yu, En Tan, Wesley, Yeung, Christina, Scaduto, Sarah, Bolongaita, Maria Teresa Kasunuran, Cruz, Mengru, Liu, Xiaohao, Lin, Yan Yuan, Tan, and Mengling, Feng
- Subjects
Big Data ,Machine Learning ,diarrhoea ,Critical Care ,Albumins ,Gastrointestinal Infection ,bacterial infection ,Humans ,Hospital Mortality ,dietary - gastrointestinal infections - Abstract
Research objectives Clostriodiodes difficile infection (CDI) is a major cause of healthcare-associated diarrhoea with high mortality. There is a lack of validated predictors for severe outcomes in CDI. The aim of this study is to derive and validate a clinical prediction tool for CDI in-hospital mortality using a large critical care database. Methodology The demographics, clinical parameters, laboratory results and mortality of CDI were extracted from the Medical Information Mart for Intensive Care-III (MIMIC-III) database. We subsequently trained three machine learning models: logistic regression (LR), random forest (RF) and gradient boosting machine (GBM) to predict in-hospital mortality. The individual performances of the models were compared against current severity scores (Clostridiodes difficile Associated Risk of Death Score (CARDS) and ATLAS (Age, Treatment with systemic antibiotics, leukocyte count, Albumin and Serum creatinine as a measure of renal function) by calculating area under receiver operating curve (AUROC). We identified factors associated with higher mortality risk in each model. Summary of results From 61 532 intensive care unit stays in the MIMIC-III database, there were 1315 CDI cases. The mortality rate for CDI in the study cohort was 18.33%. AUROC was 0.69 (95% CI, 0.60 to 0.76) for LR, 0.71 (95% CI, 0.62 to 0.77) for RF and 0.72 (95% CI, 0.64 to 0.78) for GBM, while previously AUROC was 0.57 (95% CI, 0.51 to 0.65) for CARDS and 0.63 (95% CI, 0.54 to 0.70) for ATLAS. Albumin, lactate and bicarbonate were significant mortality factors for all the models. Free calcium, potassium, white blood cell, urea, platelet and mean blood pressure were present in at least two of the three models. Conclusion Our machine learning derived CDI in-hospital mortality prediction model identified pertinent factors that can assist critical care clinicians in identifying patients at high risk of dying from CDI.
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- 2021
3. Systematic review on the definition and predictors of severe Clostridiodes difficile infection
- Author
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Yan Yuan Tan, Valencia Ru-Yan Zhang, Christina Scaduto, Maria Teresa Kasunuran Cruz, Hao Du, Mengling Feng, Aaron Shu Jeng Woo, and Kewin Tien Ho Siah
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Male ,medicine.medical_specialty ,genetic structures ,MEDLINE ,Comorbidity ,Severity of Illness Index ,law.invention ,03 medical and health sciences ,Leukocyte Count ,0302 clinical medicine ,law ,Risk Factors ,Internal medicine ,Severity of illness ,Global health ,Medicine ,Humans ,Serum Albumin ,Retrospective Studies ,Cross Infection ,Hepatology ,business.industry ,Clostridioides difficile ,High mortality ,Gastroenterology ,Intensive care unit ,Optimal management ,Diarrhea ,030220 oncology & carcinogenesis ,Creatinine ,Clostridium Infections ,030211 gastroenterology & hepatology ,Female ,medicine.symptom ,business ,Low serum albumin ,Biomarkers - Abstract
Clostridiodes difficile infection (CDI) is one of the most common hospital-acquired infections with high mortality rates. Optimal management of CDI depends on early recognition of severity. However, currently, there is no acceptable standard of prediction. We reviewed severe CDI predictors in published literature and its definition according to clinical guidelines. We systematically reviewed studies describing clinical predictors for severe CDI in medical databases (Cochrane, EMBASE, Global Health Library, and MEDLINE/PubMed). They were independently evaluated by two reviewers. Six hundred thirty-three titles and abstracts were screened, and 31 studies were included. We excluded studies that were restricted to a specific patient population. There were 16 articles that examined mortality in CDI, as compared with 15 articles investigating non-mortality outcomes of CDI. The commonest risk factors identified were comorbidities, white blood cell count, serum albumin level, age, serum creatinine level and intensive care unit admission. Generally, the studies had small patient populations, were retrospective in nature, and mostly from Western centers. The commonest severe CDI criteria in clinical guidelines were raised white blood cell count, followed by low serum albumin and raised serum creatinine levels. There was no commonly agreed upon definition of severe CDI severity in the literature. Current clinical guidelines' definitions for severe CDI are heterogeneous. Hence, there is a need for prospective multi-center studies using standardized protocol for biospecimen investigation collection and shared data on outcomes of patients in order to devise a universally accepted definition for severe CDI.
- Published
- 2020
4. Prediction of in-hospital mortality of Clostriodiodes difficile infection using critical care database: a big data-driven, machine learning approach
- Author
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Wesley Yeung, Kewin Tien Ho Siah, Valencia Zhang Ru-Yan, Hao Du, Christopher Yu En Tan, Xiaohao Lin, Mengling Feng, Readon Teh, Christina Scaduto, Maria Teresa Kasunuran Cruz, Mengru Liu, Sarah Bolongaita, and Yan Yuan Tan
- Subjects
Creatinine ,In hospital mortality ,Database ,Receiver operating characteristic ,business.industry ,Mortality rate ,Gastroenterology ,Renal function ,RC799-869 ,Diseases of the digestive system. Gastroenterology ,computer.software_genre ,Machine learning ,Logistic regression ,Intensive care unit ,law.invention ,chemistry.chemical_compound ,chemistry ,law ,Cohort ,Medicine ,Artificial intelligence ,business ,computer - Abstract
Research objectivesClostriodiodes difficile infection (CDI) is a major cause of healthcare-associated diarrhoea with high mortality. There is a lack of validated predictors for severe outcomes in CDI. The aim of this study is to derive and validate a clinical prediction tool for CDI in-hospital mortality using a large critical care database.MethodologyThe demographics, clinical parameters, laboratory results and mortality of CDI were extracted from the Medical Information Mart for Intensive Care-III (MIMIC-III) database. We subsequently trained three machine learning models: logistic regression (LR), random forest (RF) and gradient boosting machine (GBM) to predict in-hospital mortality. The individual performances of the models were compared against current severity scores (Clostridiodes difficile Associated Risk of Death Score (CARDS) and ATLAS (Age, Treatment with systemic antibiotics, leukocyte count, Albumin and Serum creatinine as a measure of renal function) by calculating area under receiver operating curve (AUROC). We identified factors associated with higher mortality risk in each model.Summary of resultsFrom 61 532 intensive care unit stays in the MIMIC-III database, there were 1315 CDI cases. The mortality rate for CDI in the study cohort was 18.33%. AUROC was 0.69 (95% CI, 0.60 to 0.76) for LR, 0.71 (95% CI, 0.62 to 0.77) for RF and 0.72 (95% CI, 0.64 to 0.78) for GBM, while previously AUROC was 0.57 (95% CI, 0.51 to 0.65) for CARDS and 0.63 (95% CI, 0.54 to 0.70) for ATLAS. Albumin, lactate and bicarbonate were significant mortality factors for all the models. Free calcium, potassium, white blood cell, urea, platelet and mean blood pressure were present in at least two of the three models.ConclusionOur machine learning derived CDI in-hospital mortality prediction model identified pertinent factors that can assist critical care clinicians in identifying patients at high risk of dying from CDI.
- Published
- 2021
5. Long-Term Outcome Following Surgery for Colorectal Cancers in Octogenarians: A Single Institution’s Experience of 204 Patients
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Jody Zhiyang Liu, Yan-Yuan Tan, Frederick H. Koh, Ker-Kan Tan, and Richard Sim
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Male ,medicine.medical_specialty ,Population ageing ,Colorectal cancer ,Treatment outcome ,Kaplan-Meier Estimate ,Risk Assessment ,Disease-Free Survival ,Cohort Studies ,Postoperative Complications ,Cause of Death ,medicine ,Humans ,Neoplasm Invasiveness ,Hospital Mortality ,Single institution ,Geriatric Assessment ,Colectomy ,Neoplasm Staging ,Retrospective Studies ,Aged, 80 and over ,Analysis of Variance ,Singapore ,business.industry ,Incidence (epidemiology) ,Age Factors ,Gastroenterology ,Cancer ,Prognosis ,medicine.disease ,Survival Analysis ,Surgery ,Multivariate Analysis ,Female ,Colorectal Neoplasms ,business - Abstract
The incidence of colorectal cancer in elderly patients is likely to increase with an aging population. The aims of this study are to review our experience in the surgical management of octogenarians with colorectal cancers and to identify factors that influence the short-term and long-term outcomes.A retrospective review of all octogenarians who underwent surgery for colorectal cancer from December 2002 to October 2008 was performed.We identified 204 patients with a median age of 84 years (range, 80-97 years). The majority of patients had an American Society of Anesthesiologists score ≥3 (n = 142, 69.6%) and a Charlson Comorbidity Index of ≤3 (n = 128, 62.7%). Emergency surgery was performed in 83 (40.7%) patients. Left-sided malignancy was seen in 138 patients (67.6%). Most of the patients had either stage II (n = 75, 36.8%) or III (n = 69, 33.8%) diseases. The 30-day mortality rate was 16.2% (n = 33). After multivariate analysis, the independent variables predicting worse perioperative complications and death were age85 years old, emergency surgery, and Charlson Comorbidity Index3. The median follow-up for the 171 remaining patients was 27 months (range, 2-92 months). The 30-day readmission rate was 2.9% (n = 5). Thirty-one (21.2%) of 146 patients who survived curative surgery developed recurrent disease. Seventy (34.3%) patients died from various etiologies after their first 30 days postoperatively (60% cancer-specific with median survival of 15 months and 40% noncancer-related with median survival of 14 months). Overall and disease-free survivals were adversely affected in patients with advanced malignancy and in those with severe perioperative complications.Surgery for octogenarians with colorectal cancers is associated with significant morbidity and mortality rates which are associated with advanced age, emergency surgery, and Charlson Comorbidity Index3. Long-term survival is dependent on the stage of the malignancy and the presence of severe perioperative complications.
- Published
- 2012
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