27 results on '"Y. Ben Salem"'
Search Results
2. Chorioamnionitis due to Lactococcus lactis cremoris: A case report
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F. Azouzi, C. Chahed, M. Marzouk, A. Ferjani, N. Hannechi, M. Fekih, Y. Ben Salem, and J. Boukadida
- Subjects
Surgery ,RD1-811 ,Gynecology and obstetrics ,RG1-991 - Abstract
Lactococcus lactis cremoris is rarely involved in human pathology. A thirty two-year old pregnant woman with premature rupture of membrane history presented with chorioamnionitis due to L. lactis cremoris. She underwent an emergency caesarian section and was treated with antibiotics including the association of amoxicillin and clavulanic acid. She was completely recovered. This is the first case to our knowledge of chorioamnionitis due to this organism. Keywords: Chorioamnionitis, Premature rupture of membranes, Lactococcus lactis cremoris
- Published
- 2015
- Full Text
- View/download PDF
3. Biological Image Segmentation Using Region-Scalable Fitting Energy with B-Spline Level Set Implementation and Watershed
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R. Rahali, N. Dridi, Y. Ben Salem, X. Descombes, E. Debreuve, F. De Graeve, H. Dahman, Debreuve, Eric, University of Gabes, Laboratoire d'Informatique, Signaux, et Systèmes de Sophia Antipolis (I3S), Université Nice Sophia Antipolis (1965 - 2019) (UNS), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA), Institut de Biologie Valrose (IBV), and COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)
- Subjects
Biomedical Engineering ,Biophysics ,[SPI.SIGNAL]Engineering Sciences [physics]/Signal and Image processing ,[SPI.SIGNAL] Engineering Sciences [physics]/Signal and Image processing - Abstract
International audience; ObjectivesImage segmentation plays an important role in the analysis and understanding of the cellular process. However, this task becomes difficult when there is intensity inhomogeneity between regions, and it is more challenging in the presence of the noise and clustered cells. The goal of the paper is propose an image segmentation framework that tackles the above cited problems.Material and methodsA new method composed of two steps is proposed: First, segment the image using B-spline level set with Region-Scalable Fitting (RSF) active contour model, second apply the Watershed algorithm based on new object markers to refine the segmentation and separate clustered cells. The major contributions of the paper are: 1) Use of a continuous formulation of the level set in the B-spline basis, 2) Develop the energy function and its derivative by introducing the RSF model to deal with intensity inhomogeneity, 3) For the Watershed, propose a relevant choice of markers that considers the cell properties.ResultsExperimental results are performed on widely used synthetic images, in addition to simulated and real biological images, without and with additive noise. They attest the high quality of segmentation of the proposed method in terms of quantitative and qualitative evaluation.ConclusionThe proposed method is able to tackle many difficulties at the same time: overlapped intensities, noise, different cell sizes and clustered cells. It provides an efficient tool for image segmentation especially biological ones.
- Published
- 2022
4. Campylobacter fetus Meningitis: A diagnosis to suggest in immunocompromised patients
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F. Ben Fradj, Jalel Boukadida, Y. Ben Salem, Manel Marzouk, M. Talbi, and M. Abdeljelil
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Imipenem ,biology ,business.industry ,Immune deficiency ,Case Report ,Infectious and parasitic diseases ,RC109-216 ,Antibiotic therapy ,medicine.disease ,biology.organism_classification ,Ciprofloxacin ,Infectious Diseases ,Campylobacter fetus ,Immunology ,Medicine ,Meningitis ,Cerebrospinal fluid culture ,business ,medicine.drug - Abstract
Campylobacter fetus causes in humans mostly gastroenteritis. Systemic infection occurs almost exclusively in immunocompromised patients with chronic debilitating diseases. We report the case of a Campylobacter fetus meningitis in a woman aged 48 years with a history of systemic lupus erythematosus treated with corticosteroids and immunosuppressive drugs. Cerebrospinal fluid culture was positive for Campylobacter fetus. The evolution was favorable using imipenem and ciprofloxacin.
- Published
- 2021
5. Modified DTC control using fuzzy logic control for dual three phase induction machine with open phases
- Author
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Abir Belgacem, Y. Ben Salem, and Mohamed Naceur Abdelkrim
- Subjects
Variable structure control ,Engineering ,Vector control ,Direct torque control ,Control theory ,business.industry ,Stator ,law ,Torque ,business ,Fuzzy logic ,Induction motor ,law.invention - Abstract
The aim of this paper is to control a dual three induction motor drives under open phases. The DTC is a variable structure control strategy with simplicity, fast response, and tolerance to motor parameter variation, which provides direct control of stator flux and electromagnetic torque by optimally selecting the inverter states in each sampling period. Conventional DTC of dual three induction motor has the limitations of constant duty ratio for every switching period and high torque and flux ripples. To solve these problems and ameliorate the performances of this control method, a fuzzy logic controller is used instead of the hysteresis torque and flux controller to minimizing the torque and flux ripple. The faulted mode of the six phase induction machine leads to torque oscillations and poor tracking behavior. In this way, this paper presents a new modified fuzzy DTC for dual three phase induction motor under open phase. The performance of the modified fuzzy DTC is evaluated through simulation and it is shown to be superior to the conventional DTC in term of minimization the torque and flux ripple under open phase.
- Published
- 2015
6. Caractérisation moléculaire des souches invasives d'Haemophilus influenzae isolées dans la région du Sahel tunisien
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R. Mzoughi, Y. Ben Salem, O. Boullegue, S. Ktata, N. Boujaafar, and Maha Mastouri
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medicine ,General Medicine ,Biology ,medicine.disease_cause ,Molecular biology ,Pulsed field electrophoresis ,Haemophilus influenzae - Abstract
Resume Cette etude a porte sur 25 souches d' Haemophilus influenzae isolees de cas de meningites et de septicemies chez des enfants âges de moins de cinq ans hospitalises dans les services pediatriques de trois hopitaux de la region du Sahel tunisien durant la periode 1997–2002. Ces souches ont ete biotypees et soumises a un typage capsulaire, par agglutination sur lame et reaction de polymerisation en chaine (PCR), pour la detection du gene bex A et la determination de sa specificite. Le polymorphisme genetique de ces souches a ete etudie en PCR aleatoire (AP-PCR) avec deux amorces differentes RAP IV et 217 δ 2 , ainsi qu'en electrophorese en champ pulse apres digestion de l'ADN total avec l'enzyme de restriction Sma I (ECP Sma I). Dix-neuf souches parmi les 25 (76 %) etaient de biotype I. Le gene bex A a ete mis en evidence chez 13 souches (52 %) et etait dans tous les cas de type b. Douze souches etaient acapsulees. L'AP-PCR avec l'amorce RAP IV ayant genere 23 profils pour 25 souches (avec un indice de discrimination ID = 0,993), s'est averee aussi discriminante que l'electrophorese en champ pulse (20 profils pour 21 souches avec un ID = 0,995). Nous constatons la meilleure sensibilite du typage capsulaire par PCR par rapport a l'agglutination sur lame, la diversite genetique des souches invasives et la frequence elevee des souches acapsulees. L'AP-PCR avec l'amorce RAP IV est une alternative de choix par rapport a l'ECP pour le suivi epidemiologique des infections invasives a H. influenzae .
- Published
- 2006
7. Speed ripple analysis for a fault induction machines using current spectrum analysis
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Mohamed Naceur Abdelkrim, Y. Ben Salem, and Abir Belgacem
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Quantitative Biology::Subcellular Processes ,Vector control ,Direct torque control ,law ,Stator ,Control theory ,Computer science ,Ripple ,Torque ,Fault (power engineering) ,Wound rotor motor ,Induction motor ,law.invention - Abstract
An opening of a stator phases in the multiphase induction machines leads to a torque oscillations and rotor speed ripples. In this paper, a stator current spectrum (called Motor Current Signature Analysis MCSA) is used to detect an open stator phase. The induction machine has a dual three phase windings spatially shifted by sixty electrical degree. The aim of the proposed approach consists in computing the rotor speed ripple of the SPIM under open phase.
- Published
- 2014
8. Outbreak of Pseudomonas putida bacteraemia in a neonatal intensive care unit
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Francine Grimont, N Mahdhaoui, Patrick A. D. Grimont, O. Bouallegue, H Sboui, François-Xavier Weill, R. Mzoughi, and Y. Ben Salem
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Microbiology (medical) ,Tunisia ,Neonatal intensive care unit ,Bacteremia ,Disease Outbreaks ,law.invention ,Microbiology ,Catheters, Indwelling ,law ,Intensive Care Units, Neonatal ,Pulsed-field gel electrophoresis ,Humans ,Medicine ,Cross Infection ,Umbilicus ,biology ,Pseudomonas putida ,business.industry ,Infant, Newborn ,Outbreak ,General Medicine ,bacterial infections and mycoses ,biology.organism_classification ,medicine.disease ,Intensive care unit ,Electrophoresis, Gel, Pulsed-Field ,Infectious Diseases ,DNA profiling ,business ,Pseudomonadaceae - Abstract
During the period of 9-27 March 2001, Pseudomonas putida strains were recovered from 10 neonates hospitalized in the neonatal intensive care unit of Farhat Hached Hospital, Sousse (Tunisia). Seven neonates developed bacteraemia, and three had an umbilical catheter-related infection (without bacteraemia). A total of 18 isolates were cultured from blood (N = 11) and catheters (N = 7). These isolates were identified as P. putida by routine biochemical methods (API 20 NE, bioMérieux, Lyon, France). Restriction endonuclease DNA profiles were determined by pulsed-field gel electrophoresis using two endonucleases XbaI and SpeI. They yielded the same patterns showing that the outbreak was caused by a single clone of P. putida. Although the antiseptic solutions used to clean the umbilicus were implicated circumstantially as probable sources, they were not sampled and so this could not be confirmed.
- Published
- 2004
9. Chorioamnionitis due to Lactococcus lactis cremoris: A case report
- Author
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M. Fekih, C. Chahed, N. Hannechi, F. Azouzi, Asma Ferjani, Jalel Boukadida, Manel Marzouk, and Y. Ben Salem
- Subjects
biology ,business.industry ,medicine.drug_class ,Antibiotics ,Lactococcus lactis ,Premature rupture of membranes ,lcsh:Surgery ,Obstetrics and Gynecology ,lcsh:RD1-811 ,Amoxicillin ,Chorioamnionitis ,medicine.disease ,biology.organism_classification ,lcsh:Gynecology and obstetrics ,Article ,Microbiology ,Lactococcus lactis cremoris ,Clavulanic acid ,Emergency Caesarian section ,Medicine ,business ,lcsh:RG1-991 ,medicine.drug - Abstract
Lactococcus lactis cremoris is rarely involved in human pathology. A thirty two-year old pregnant woman with premature rupture of membrane history presented with chorioamnionitis due to L. lactis cremoris. She underwent an emergency caesarian section and was treated with antibiotics including the association of amoxicillin and clavulanic acid. She was completely recovered. This is the first case to our knowledge of chorioamnionitis due to this organism., Highlights • Lactococcus lactis cremoris is rarely involved in human pathology. • A thirty two-year-old pregnant woman had premature rupture of membrane history. • She presented with chorioamnionitis due to Lactococcus lactis cremoris. • She underwent an emergency caesarian section and was treated with antibiotics. • This is the first case to our knowledge of chorioamnionitis due to this germ.
- Published
- 2015
10. A Nonlinear State Feedback Control for Induction Motors
- Author
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Lassad Sbita and Y. Ben Salem
- Subjects
Nonlinear system ,Engineering ,Electronic speed control ,Vector control ,Control theory ,business.industry ,Overshoot (signal) ,Control engineering ,Nonlinear control ,business ,Induction motor ,Machine control - Abstract
In this paper, a new approach to nonlinear control (NC) of induction motors is presented. This approach consists of a novel direction in the development of controllers for the rotor flux amplitude and the motor speed. The proposed approach shows that the nonlinear motor dynamics can be linearized and decoupled by means of feedback-linearization techniques. A comparative study is carried out between the performances of the nonlinear controller and field oriented control (FOC) using the simulation results, which show that the NC operates quite robustly under external disturbances and it can provide good dynamic performance such as no overshoot and fast transient time in the speed control.
- Published
- 2006
11. Classification of tissues by neural network
- Author
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Y. Ben Salem, Salem Nasri, and R. Tourki
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Artificial neural network ,Contextual image classification ,business.industry ,Computer science ,Pattern recognition ,Base (topology) ,Sample (graphics) ,Statistical classification ,Identification (information) ,Pattern recognition (psychology) ,Computer vision ,Artificial intelligence ,business ,Support vector machine classification - Abstract
In this paper, an algorithm of identification of a tissue is elaborated. It is based on the comparison of a tissue with the linen, the satin and the serge. Many images of these tissues are pre-treated to bring out the vector of parameters of each one. The tested sample is compared with each one of the three images of the tissues stored in the data base using a neural network method. This method is faster than the classical methods and leads to a recognition of 70%.
- Published
- 2005
12. [Contribution of phage typing and ribotyping in investigating a typhoid fever outbreak in Tunisia]
- Author
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O, Bouallègue, E, Grimont, Y, Ben Salem, A, Letaief, and R, Mzoughi
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Adult ,Male ,Tunisia ,Adolescent ,Middle Aged ,Salmonella typhi ,Ribotyping ,Disease Outbreaks ,Child, Preschool ,Humans ,Female ,Typhoid Fever ,Child ,Bacteriophage Typing - Abstract
A study was carried out to investigate an outbreak of typhoid fever that occurred in Sousse city and in the vicinity of Sousse (Tunisia) during summer 1999. Twenty four isolates of Salmonella enterica serotype Typhi were isolated in hospitalized patients with a typhoid fever in two hospitals (Farhat Hached Sousse and M'saken) and were studied with the help of two molecular typing methods: phage typing and automated ribotyping. Twenty one isolates with the Vi antigen had profile DVS (Degraded Vi Strain), one isolate with the Vi antigen belonged to phage type A and two isolates were non phage typable (no Vi antigen). The same ribotype was found in 22 out of 24 isolates. The results suggested that ribotyping is more discriminative than phage typing in this case in distinguishing strains and the strains shared the same source of the contamination. Unfortunately the precise source of the contamination could not be determined.
- Published
- 2004
13. [Molecular characterization of invasive Haemophilus influenzae strains isolated in Tunisia]
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Y, Ben Salem, O, Boullegue, M, Mastouri, S, Ktata, N, Boujaafar, and R, Mzoughi
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Haemophilus Infections ,Polymorphism, Genetic ,Tunisia ,Child, Preschool ,Sepsis ,Gene Amplification ,Humans ,Serotyping ,Haemophilus influenzae ,Polymerase Chain Reaction ,Phylogeny ,Meningitis, Bacterial - Abstract
We reported a molecular characterization of 25 Haemophilus influenzae strains derived from cases of meningitis and sepsis in children aged less than five years hospitalized in pediatric wards from three hospitals in the Sahel area (Tunisia) during the period 1997-2002. These strains were biotyped and subjected to a capsular typing by Slide agglutination serotyping and Polymerase Chain Reaction (PCR). The genetic polymorphism of these strains was also studied in Arbitrarily Primed Polymerase Chain Reaction (AP-PCR) with two sets of primers: RAP IV and 217 delta(2) as in Pulsed Field Gel Electrophoresis after digestion of the total DNA with the restriction enzyme SmaI (PFGE SmaI). Nineteen strains among 25 (76%) were of biotype I. The bexA gene was highlighted in 13 strains (52%) and in all the cases it was of the type b. Twelve strains (48%) were shown to be unencapsulated by PCR. AP-PCR RAP IV (23 genotypes/25 with a discrimination index ID=0.993) had shown nearly the same discriminatory power than PFGE (20 genotypes/21 strains with a discrimination index ID=0.995). We thus note, how capsular typing by PCR is more sensitive than slide agglutination serotyping. We also note the genetic diversity of the invasive strains isolated with a remarkable presence of non typable strains. AP PCR seems to be an alternative of choice for the epidemiologic follow-up of the Haemophilus influenzae invasive infections.
- Published
- 2004
14. Campylobacter fetus Meningitis: A diagnosis to suggest in immunocompromised patients.
- Author
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Talbi M, Abdeljelil M, Marzouk M, Ben Fradj F, Ben Salem Y, and Boukadida J
- Abstract
Campylobacter fetus causes in humans mostly gastroenteritis. Systemic infection occurs almost exclusively in immunocompromised patients with chronic debilitating diseases. We report the case of a Campylobacter fetus meningitis in a woman aged 48 years with a history of systemic lupus erythematosus treated with corticosteroids and immunosuppressive drugs. Cerebrospinal fluid culture was positive for Campylobacter fetus . The evolution was favorable using imipenem and ciprofloxacin., Competing Interests: The authors report no declarations of interest., (© 2021 The Authors. Published by Elsevier Ltd.)
- Published
- 2021
- Full Text
- View/download PDF
15. What is the relationship between the coronavirus crisis and air pollution in Tunisia?
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Chekir N and Ben Salem Y
- Abstract
Abstract: Since the beginning of 2020, the COVID-19 pandemic has generated horror and panic around the world. Nevertheless, this terrible crisis is having a positive side effect: it is lowering pollution levels. The outbreak of the coronavirus has caused many governments to impose measures to slow the spread of the virus within populations, such as limiting population displacement, requesting social distancing and the isolation of individuals at home, and reducing industrial activity. In this work, we investigated the effects of governmental measures taken to limit the spread of COVID-19 on the concentrations of air pollutants over four Tunisian cities (Tunis, Sousse, Sfax, and Tataouine). Data on the average daily levels of nitrogen dioxide, sulfur dioxide, carbon monoxide, and particulate matter during January, February, March, and April of 2020 were collected, treated, and analyzed for each city. Curves of average monthly pollutant concentrations from 1 January to 30 April for each city investigated showed that measures taken to reduce the spread of the virus had a substantial impact on emission levels: there were tremendous drops of 51% in NO
2 and 52% in SO2 over Sfax City during March compared to those during January, while nitrogen dioxide and sulfur dioxide levels dropped by about 38% and 42%, respectively, over Tunis City and by around 20% for Sousse. During the four months investigated, almost all of the pollutant concentrations showed a significant drop from mid-March. On 12 March, the Tunisian government imposed some individual and collective measures to protect the population from the virus, such as social distancing, limiting transportation, shutting down schools and universities, and reducing industrial activity. A general lockdown was brought in later. Thus, restricting human and industrial activities appeared to affect the air quality in Tunisia, leading to a marked improvement in the air quality index., Competing Interests: Conflict of interestThe authors declare no conflict of interest., (© The Author(s) 2020.)- Published
- 2021
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16. 7β-hydroxycholesterol-induced cell death, oxidative stress, and fatty acid metabolism dysfunctions attenuated with sea urchin egg oil.
- Author
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Zarrouk A, Ben Salem Y, Hafsa J, Sghaier R, Charfeddine B, Limem K, Hammami M, and Majdoub H
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- Animals, Gas Chromatography-Mass Spectrometry, Glutathione Peroxidase metabolism, Lipid Peroxidation drug effects, Magnetic Resonance Spectroscopy, Sea Urchins, Superoxide Dismutase metabolism, Cell Death drug effects, Fatty Acids metabolism, Hydroxycholesterols pharmacology, Oils pharmacology, Ovum metabolism, Oxidative Stress drug effects
- Abstract
Some oxysterols resulting either from enzymatic oxidation or autoxidation of cholesterol are associated with age-related diseases including neurodegenerative diseases. Among these oxysterols, 7β-hydroxycholesterol (7β-OHC) is often found at increased levels in patients. It is therefore important to identify molecules or mixtures of molecules to prevent 7β-OHC-induced side effects. Consequently, murine oligodendrocytes (158N) were cultured in the absence or presence of 7β-OHC (20 μg/mL, 24 h) with or without a natural oil extracted from sea urchin (Paracentrotus lividus) eggs known for its biological activity. Firstly, the chemical composition of this oil was determined using
31 P NMR and GC-MS. Secondly, this oil was used to reduce 7β-OHC-induced side effects. To this end, the oil (160 μg/mL) was added to the culture medium of 158N cells 2 h before 7β-OHC. The effects of 7β-OHC with or without the oil on cell viability were studied with the MTT test. Photometric methods were used to analyze antioxidant enzyme activities, superoxide dismutase (SOD) and glutathione peroxidase (GPx), as well as the generation of lipid peroxidation products (malondialdehyde (MDA), conjugated dienes (CDs)) and protein oxidation product (carbonylated proteins (CPs)). Gas chromatography was used to determine the fatty acid profile. With 7β-OHC, an induction of cell death associated with oxidative stress (alteration of GPx and SOD activities) was observed; an overproduction of lipid peroxidation products (MDA and CDs) and CPs was also revealed. Sea urchin egg oil attenuated 7β-OHC-induced cytotoxicity: 7β-OHC-induced cell death was reduced, GPx and SOD activities were normalized, and lower levels of MDA, CDs and CPs were produced. In addition, whereas a disturbed fatty acid profile was observed with 7β-OHC, similar fatty acid profiles were found in control cells and in cells cultured with 7β-OHC associated with sea urchin egg oil. These data demonstrate the protective activities of sea urchin egg oil against 7β-OHC-induced side effects on 158N cells, supporting the concept that this oil may have benefits in the prevention of neurodegenerative diseases., (Copyright © 2018 Elsevier B.V. and Société Française de Biochimie et Biologie Moléculaire (SFBBM). All rights reserved.)- Published
- 2018
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17. Microwave-assisted extraction and pharmacological evaluation of polysaccharides from Posidonia oceanica.
- Author
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Ben Salem Y, Abdelhamid A, Mkadmini Hammi K, Le Cerf D, Bouraoui A, and Majdoub H
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- Acetic Acid pharmacology, Analgesics chemistry, Analgesics isolation & purification, Analgesics pharmacology, Analgesics therapeutic use, Animals, Anti-Inflammatory Agents, Non-Steroidal chemistry, Anti-Inflammatory Agents, Non-Steroidal isolation & purification, Anti-Inflammatory Agents, Non-Steroidal pharmacology, Anti-Inflammatory Agents, Non-Steroidal therapeutic use, Behavior, Animal drug effects, Edema drug therapy, Mice, Models, Theoretical, Polysaccharides chemistry, Polysaccharides therapeutic use, Alismatales chemistry, Chemical Fractionation methods, Microwaves, Polysaccharides isolation & purification, Polysaccharides pharmacology
- Abstract
Microwave-assisted extraction was employed for the isolation of polysaccharides from Posidonia oceanica (PPO). The extracting parameters were optimized adopting response surface methodology. The highest polysaccharide yield (2.55 ± 0.09%), which is in concordance with the predicted value (2.76%), was obtained under the following conditions: extraction time 60 s, liquid-solid ratio of 50:1 (mL/g) and power of 800 W. This polysaccharide, with molecular weight of 524 KDa, characterized by gas chromatography-mass spectrometry showed that PPO was mainly composed of galactose, glucose, and arabinose with molar percentages 25.38, 24.37, and 21.64%, respectively. The pharmacological evaluation of PPO using animal models at the dose of 100 mg/kg indicated a significant anti-inflammatory activity with a percentage of inhibition of edema of 54.65% and a significant antinociceptive activity with 78.91% inhibition of writhing for peripheral analgesic activity and an increase in the hot plate reaction time for central analgesic activity.
- Published
- 2017
- Full Text
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18. Aeromonas spp. Human Infection: Retrospective Study in the region of Sousse, 2011 - 2015.
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Bargui H, Marzouk M, Benhadj A, Hadj Ali M, Ben Salem Y, and Boukadida J
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- Female, Humans, Male, Retrospective Studies, Time Factors, Tunisia, Young Adult, Aeromonas isolation & purification, Gram-Negative Bacterial Infections diagnosis, Gram-Negative Bacterial Infections microbiology
- Abstract
Objective: To present the clinical and bacteriological characteristics of human Aeromonas infections in the central region of Tunisia from January 2011 to September 2015., Methods: Retrospective study concerning all Aeromonas spp strains isolated at our laboratory during a period of 5 years (2011-2015). Following data were collected: gender, age, hospital department, co-morbidities, site of infection, date, the Aeromonas species and susceptibility phenotype. Identification was based on conventional criteria and antibiotic susceptibility was performed according to the recommendations of "the Committee of the French Society of Microbiology., Results: Thirty six strains of Aeromonas spp were collected during our study period. Mean age was 24 years old with a sex ratio of 1.1. The samples mainly provided from internal medicine (30,5%), neonatology (19,4%). Digestive tract (33%), blood stream (33%), skin and soft tissues (17%) and urinary tract (3%) were the sites of infection. Five infections (14%) were nosocomial, associated with biomaterials. The quart of patients was immuno-compromised. The seasonal distribution showed a summer-autumn peak. We noted 2 species: A. hydrophila (83%) and A. veronii biovar sobria (17%). All strains were resistant to amoxicillin and amoxicillin-clavulanic acid whereas we noted effectiveness of third-generation cephalosporins (C3G), fluoroquinolones and aminoglycosids.All patients received antibiotic treatment: 93% an association. Four deaths occured not directly linked to Aeromonas infection., Conclusion: In our area, Aeromonas infections must be mentioned in case of diarrhea, especially during summer-autumn or sepsis particularly in immunocompromised patients. A. hydrophila remains the most frequent species at our patients. Due to their resistance to aminopenicillins, a probabilistic treatment including either a fluoroquinolone or a C3G, evently associated with an aminoglycoside, should be conducted.
- Published
- 2017
19. Chorioamnionitis due to Lactococcus lactis cremoris : A case report.
- Author
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Azouzi F, Chahed C, Marzouk M, Ferjani A, Hannechi N, Fekih M, Ben Salem Y, and Boukadida J
- Abstract
Lactococcus lactis cremoris is rarely involved in human pathology. A thirty two-year old pregnant woman with premature rupture of membrane history presented with chorioamnionitis due to L. lactis cremoris. She underwent an emergency caesarian section and was treated with antibiotics including the association of amoxicillin and clavulanic acid. She was completely recovered. This is the first case to our knowledge of chorioamnionitis due to this organism.
- Published
- 2015
- Full Text
- View/download PDF
20. Serotype distribution and antimicrobial resistance of invasive and noninvasive pneumococcal isolates in Tunisia.
- Author
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Marzouk M, Ferjani A, Bouafia N, Harb H, Ben Salem Y, and Boukadida J
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- Adolescent, Adult, Aged, Aged, 80 and over, Child, Child, Preschool, Developing Countries, Drug Resistance, Microbial, Female, Humans, Infant, Infant, Newborn, Latex Fixation Tests, Male, Middle Aged, Pneumococcal Infections epidemiology, Pneumococcal Infections microbiology, Pneumococcal Vaccines supply & distribution, Serogroup, Streptococcus pneumoniae classification, Streptococcus pneumoniae drug effects, Streptococcus pneumoniae pathogenicity, Tunisia epidemiology, Virulence, Young Adult, Streptococcus pneumoniae isolation & purification
- Abstract
Pneumococcal conjugate vaccines have not yet been introduced into the national program for childhood vaccination in Tunisia. The aim of this 7-year study was to obtain local data about serotype distribution and antimicrobial resistance of Streptococcus pneumoniae. A total of 203 isolates of culture confirmed that S. pneumoniae was evaluated. Invasive (n=108) and noninvasive (n=95) pneumococcal isolates were obtained from patients aged from 1 month to 85 years old. Considering all age groups, vaccine coverage was 40%, 62%, and 68% for PCV7, PCV10, and PCV13 serotypes, respectively. Overall, 31% of these isolates were penicillin G nonsusceptible. The most prevalent serotypes identified were those found in currently available pneumococcal conjugate vaccines, emphasizing the importance of implementing the vaccine in the routine immunization schedule at the national level.
- Published
- 2015
- Full Text
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21. Chemical composition of 8 eucalyptus species' essential oils and the evaluation of their antibacterial, antifungal and antiviral activities.
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Elaissi A, Rouis Z, Salem NA, Mabrouk S, ben Salem Y, Salah KB, Aouni M, Farhat F, Chemli R, Harzallah-Skhiri F, and Khouja ML
- Subjects
- Anti-Infective Agents chemistry, Bacteria drug effects, Eucalyptus classification, Fungi drug effects, Microbial Sensitivity Tests, Viruses drug effects, Anti-Infective Agents pharmacology, Eucalyptus chemistry, Oils, Volatile chemistry, Oils, Volatile pharmacology, Plant Oils chemistry, Plant Oils pharmacology
- Abstract
Background: In 1957, Tunisia introduced 117 species of Eucalyptus; they have been used as fire wood, for the production of mine wood and to fight erosion. Actually, Eucalyptus essential oil is traditionally used to treat respiratory tract disorders such as pharyngitis, bronchitis, and sinusitis. A few investigations were reported on the biological activities of Eucalyptus oils worldwide. In Tunisia, our previous works conducted in 2010 and 2011 had been the first reports to study the antibacterial activities against reference strains. At that time it was not possible to evaluate their antimicrobial activities against clinical bacterial strains and other pathogens such as virus and fungi., Methods: The essential oils of eight Eucalyptus species harvested from the Jbel Abderrahman, Korbous (North East Tunisia) and Souinet arboreta (North of Tunisia) were evaluated for their antimicrobial activities by disc diffusion and microbroth dilution methods against seven bacterial isolates: Haemophilus influenzae, Klebsiella pneumoniae, Pseudomonas aeruginosa, Staphylococcus aureus, Streptococcus agalactiae, Streptococcus pneumoniae and Streptococcus pyogenes. In addition, the bactericidal, fungicidal and the antiviral activities of the tested oils were carried out., Results: Twenty five components were identified by GC/FID and GC/MS. These components were used to correlate with the biological activities of the tested oils. The chemical principal component analysis identified three groups, each of them constituted a chemotype. According to the values of zone diameter and percentage of the inhibition (zdi, % I, respectively), four groups and subgroups of bacterial strains and three groups of fungal strains were characterized by their sensitivity levels to Eucalyptus oils. The cytotoxic effect and the antiviral activity varied significantly within Eucalyptus species oils., Conclusions: E. odorata showed the strongest activity against S. aureus, H. influenzae, S. agalactiae, S. pyogenes, S. pneumoniae and against all the tested fungal strains. In addition, E. odorata oil showed the most cytotoxic effect. However, the best antiviral activity appeared with E. bicostata. Virus pretreatment with E. bicostata essential oil showed better antiviral activity (IC(50) = 0.7 mg/ml, SI = 22.8) than cell-pretreatment (IC(50) = 4.8 mg/ml, SI = 3.33). The essential oil of E. astringens showed antiviral activity only when incubated with virus prior to cell infection. This activity was dose-dependent and the antiviral activity diminished with the decreasing essential oil concentration.
- Published
- 2012
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22. Molecular characterization of methicillin-resistant Staphylococcus aureus isolated in Tunisia.
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Ben Nejma M, Mastouri M, Frih S, Sakly N, Ben Salem Y, and Nour M
- Subjects
- Adolescent, Adult, Aged, Bacterial Toxins blood, Child, Child, Preschool, Chromosomes, Bacterial, Drug Resistance, Multiple, Bacterial, Electrophoresis, Polyacrylamide Gel, Female, Humans, Infant, Leukocidins genetics, Male, Methicillin therapeutic use, Microbial Sensitivity Tests, Middle Aged, Polymerase Chain Reaction, Staphylococcal Infections drug therapy, Staphylococcus aureus drug effects, Staphylococcus aureus isolation & purification, Tunisia, Virulence Factors genetics, Bacterial Proteins genetics, Genes, Bacterial genetics, Methicillin Resistance genetics, Staphylococcal Infections microbiology, Staphylococcus aureus genetics, Trans-Activators genetics
- Abstract
Community-acquired methicillin-resistant Staphylococcus aureus (MRSA) infections are an emerging problem, especially related to the production of staphylococcal toxins. In this study we investigate the phenotypic and genotypic characteristics of 72 Tunisian MRSA. Our results revealed that these strains are multiresistant. Using multiplex polymerase chain reaction, we detected staphylococcal cassette chromosome mec (SCCmec) type IV and IVA in 66 isolates. The latter are Panton-Valentine leukocidin positive. The leukotoxin genes lukE-lukD were found in most strains (92.4%). The amplification of gamma-hemolysin gene was detected only in 2 MRSA isolates. Among all strains, only 1 expressed the exfoliatin A. fnbA gene was detected in 12 strains, fnbB gene in 2 strains, and both fnbA and fnbB genes in 2 other strains. The most predominant accessory gene regulator group identified was group III. Full characterization of these MRSA strains requires the association of SCCmec typing with other molecular methods such as pulsed-field gel electrophoresis, multilocus-sequence typing, and spa typing.
- Published
- 2006
- Full Text
- View/download PDF
23. [Molecular characterization of invasive Haemophilus influenzae strains isolated in Tunisia].
- Author
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Ben Salem Y, Boullegue O, Mastouri M, Ktata S, Boujaafar N, and Mzoughi R
- Subjects
- Child, Preschool, Gene Amplification, Haemophilus Infections diagnosis, Haemophilus Infections epidemiology, Haemophilus influenzae classification, Haemophilus influenzae isolation & purification, Humans, Meningitis, Bacterial diagnosis, Meningitis, Bacterial epidemiology, Phylogeny, Polymerase Chain Reaction, Polymorphism, Genetic, Sepsis diagnosis, Sepsis epidemiology, Serotyping, Tunisia epidemiology, Haemophilus influenzae genetics, Haemophilus influenzae pathogenicity
- Abstract
We reported a molecular characterization of 25 Haemophilus influenzae strains derived from cases of meningitis and sepsis in children aged less than five years hospitalized in pediatric wards from three hospitals in the Sahel area (Tunisia) during the period 1997-2002. These strains were biotyped and subjected to a capsular typing by Slide agglutination serotyping and Polymerase Chain Reaction (PCR). The genetic polymorphism of these strains was also studied in Arbitrarily Primed Polymerase Chain Reaction (AP-PCR) with two sets of primers: RAP IV and 217 delta(2) as in Pulsed Field Gel Electrophoresis after digestion of the total DNA with the restriction enzyme SmaI (PFGE SmaI). Nineteen strains among 25 (76%) were of biotype I. The bexA gene was highlighted in 13 strains (52%) and in all the cases it was of the type b. Twelve strains (48%) were shown to be unencapsulated by PCR. AP-PCR RAP IV (23 genotypes/25 with a discrimination index ID=0.993) had shown nearly the same discriminatory power than PFGE (20 genotypes/21 strains with a discrimination index ID=0.995). We thus note, how capsular typing by PCR is more sensitive than slide agglutination serotyping. We also note the genetic diversity of the invasive strains isolated with a remarkable presence of non typable strains. AP PCR seems to be an alternative of choice for the epidemiologic follow-up of the Haemophilus influenzae invasive infections.
- Published
- 2006
- Full Text
- View/download PDF
24. Nosocomial outbreak caused by Salmonella enterica serotype Livingstone producing CTX-M-27 extended-spectrum beta-lactamase in a neonatal unit in Sousse, Tunisia.
- Author
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Bouallègue-Godet O, Ben Salem Y, Fabre L, Demartin M, Grimont PA, Mzoughi R, and Weill FX
- Subjects
- Amino Acid Sequence, Conjugation, Genetic, Drug Resistance, Bacterial genetics, Humans, Infant, Newborn, Integrons, Microbial Sensitivity Tests, Molecular Sequence Data, Salmonella enterica classification, Salmonella enterica drug effects, Salmonella enterica enzymology, Tunisia epidemiology, Cross Infection etiology, Disease Outbreaks, Salmonella Infections etiology, Salmonella enterica isolation & purification, beta-Lactamases genetics
- Abstract
In this study, we report an outbreak of Salmonella enterica serotype Livingstone resistant to extended-spectrum cephalosporins that occurred in a neonatal ward of the maternity department of Farhat Hached Hospital, Sousse, Tunisia, in 2002. A total of 16 isolates were recovered from 16 babies hospitalized in the ward during the period 1 to 16 July. All these babies developed diarrhea, and three of them developed septicemia. All the isolates demonstrated resistance to ceftriaxone and ceftazidime due to the production of an extended-spectrum beta-lactamase (ESBL). The isolates were also resistant to aminoglycosides (kanamycin, tobramycin, netilmicin, gentamicin, and amikacin) and sulfamethoxazole-trimethoprim. DNA profiles were determined by pulsed-field gel electrophoresis using the XbaI and SpeI endonucleases and by ribotyping with PstI digestion. They yielded the same patterns, showing that the outbreak was caused by a single clone. The ESBL was identified as CTX-M-27 by sequencing of PCR products and by isoelectric focusing. The ESBL resistance was transferred by a 40-kb conjugative plasmid. The mobile insertion sequence ISEcp1 was found to be located upstream of bla(CTX-M-27) in the same position as that known for a bla(CTX-M-14) sequence. A new gene named dfrA21, encoding resistance to trimethoprim and carried by a 90-kb plasmid, was characterized. The dfrA21 gene was inserted as a single resistance cassette in a class I integron. The babies were treated with colistin, and all except two recovered. The outbreak came to an end when appropriate actions were taken: patient isolation, hand washing, and disinfection of the ward.
- Published
- 2005
- Full Text
- View/download PDF
25. Investigation of the clonal dissemination of Klebsiella pneumoniae isolates producing extended-spectrum beta-lactamases in a neonatal ward, Sousse, Tunisia.
- Author
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Bouallègue-Godet O, Grimont F, Ben Salem Y, Saidani M, Mzoughi R, Sboui H, and Grimont PA
- Subjects
- Chromosomes, Bacterial, DNA Fingerprinting methods, DNA, Bacterial genetics, Disease Outbreaks, Electrophoresis, Gel, Pulsed-Field, Humans, Infant, Newborn, Klebsiella Infections blood, Klebsiella Infections cerebrospinal fluid, Klebsiella pneumoniae classification, Klebsiella pneumoniae enzymology, Klebsiella pneumoniae genetics, Microbial Sensitivity Tests, Tunisia epidemiology, beta-Lactamases analysis, Klebsiella Infections epidemiology, Klebsiella pneumoniae isolation & purification
- Abstract
This study was designed to investigate the spread of extended-spectrum beta-lactamase producing Klebsiella pneumoniae (ESBL-Kp) strains in Sousse hospital, during 7-month period by using phenotypic and genotypic markers. A total of 57 clinical isolates of ESBL-Kp, 22 strains recovered from seriously infected neonates and 35 strains recovered from colonized neonates and hospitalized in the neonatal ward of Sousse hospital, Tunisia, was subjected to 99 carbon source utilization tests, ribotyping and pulse-field gel electrophoresis (PFGE) profiles of total genomic DNA. Biotyping, ribotyping and PFGE typing showed that four different clones circulated in the neonatal ward between January and July 1997 and suggested that the epidemic strain belonged to the same biotype, ribotype and PFGE pattern, and was represented by 18 isolates from infected neonates and 28 isolates from colonized neonates. Biotyping, ribotyping and PFGE typing appeared to be reliable methods for distinguishing K. pneumoniae strains. Biotyping, which has the advantage of simplicity and rapidity, may be used as a first screening method.
- Published
- 2005
- Full Text
- View/download PDF
26. [Contribution of phage typing and ribotyping in investigating a typhoid fever outbreak in Tunisia].
- Author
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Bouallègue O, Grimont E, Ben Salem Y, Letaief A, and Mzoughi R
- Subjects
- Adolescent, Adult, Child, Child, Preschool, Female, Humans, Male, Middle Aged, Tunisia epidemiology, Bacteriophage Typing, Disease Outbreaks, Ribotyping, Salmonella typhi classification, Typhoid Fever epidemiology, Typhoid Fever microbiology
- Abstract
A study was carried out to investigate an outbreak of typhoid fever that occurred in Sousse city and in the vicinity of Sousse (Tunisia) during summer 1999. Twenty four isolates of Salmonella enterica serotype Typhi were isolated in hospitalized patients with a typhoid fever in two hospitals (Farhat Hached Sousse and M'saken) and were studied with the help of two molecular typing methods: phage typing and automated ribotyping. Twenty one isolates with the Vi antigen had profile DVS (Degraded Vi Strain), one isolate with the Vi antigen belonged to phage type A and two isolates were non phage typable (no Vi antigen). The same ribotype was found in 22 out of 24 isolates. The results suggested that ribotyping is more discriminative than phage typing in this case in distinguishing strains and the strains shared the same source of the contamination. Unfortunately the precise source of the contamination could not be determined.
- Published
- 2004
27. Outbreak of Pseudomonas putida bacteraemia in a neonatal intensive care unit.
- Author
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Bouallègue O, Mzoughi R, Weill FX, Mahdhaoui N, Ben Salem Y, Sboui H, Grimont F, and Grimont PA
- Subjects
- Bacteremia blood, Bacteremia microbiology, Catheters, Indwelling microbiology, Cross Infection microbiology, Electrophoresis, Gel, Pulsed-Field, Humans, Infant, Newborn, Tunisia epidemiology, Umbilicus microbiology, Bacteremia epidemiology, Cross Infection epidemiology, Disease Outbreaks, Intensive Care Units, Neonatal, Pseudomonas putida isolation & purification
- Abstract
During the period of 9-27 March 2001, Pseudomonas putida strains were recovered from 10 neonates hospitalized in the neonatal intensive care unit of Farhat Hached Hospital, Sousse (Tunisia). Seven neonates developed bacteraemia, and three had an umbilical catheter-related infection (without bacteraemia). A total of 18 isolates were cultured from blood (N = 11) and catheters (N = 7). These isolates were identified as P. putida by routine biochemical methods (API 20 NE, bioMérieux, Lyon, France). Restriction endonuclease DNA profiles were determined by pulsed-field gel electrophoresis using two endonucleases XbaI and SpeI. They yielded the same patterns showing that the outbreak was caused by a single clone of P. putida. Although the antiseptic solutions used to clean the umbilicus were implicated circumstantially as probable sources, they were not sampled and so this could not be confirmed.
- Published
- 2004
- Full Text
- View/download PDF
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