167 results on '"Xiyun Zhang"'
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2. Observation of Boundary-Layer Jets in the Northern South China Sea by a Research Vessel
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Xiyun Zhang, Yuhan Luo, and Yu Du
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boundary-layer jets ,shipboard observations ,performance of reanalysis datasets ,Science - Abstract
Boundary-layer jets (BLJs) in the South China Sea play an important role in heavy rainfall in South China, yet observations in maritime locations are still limited. This study examines the vertical structures and temporal evolutions of BLJs in the northern South China Sea using intensive radiosonde observations from a research vessel from 15 to 18 June 2022 and evaluates the performance of various reanalysis datasets in capturing these features. Observations identified BLJs with jet cores at altitudes of approximately 500–700 m. Wind speeds slightly decreased from 15 to 16 June and then significantly increased after 17 June, showing double peaks on 17 June below 1 km at altitudes of 250 and 700 m. Among the reanalysis datasets, ERA5 exhibited more accurate results on average, followed by MERRA2, both of which outperformed JRA55 and FNL. ERA5 and MERRA2 had mixed performances in depicting BLJ characteristics. ERA5 accurately captured the initial decrease in wind speeds and their subsequent enhancement, while MERRA2 initially faltered but improved later. On the diurnal scale, neither MERRA2 nor ERA5 accurately represented the wind speed peaks observed at 2300 and 1100 LST, whereas ERA5 roughly reflected the nocturnal acceleration of the BLJs. During the observation period, the intensification of BLJs in the northern SCS, influenced by an eastward-moving high-pressure system and a southward-moving low-pressure vortex, led to enhanced precipitation in South China that gradually moved northward from the coastline to inland regions. This study provides new insights into the detailed characteristics of marine BLJs based on direct observations.
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- 2024
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3. A strategy for Cas13 miniaturization based on the structure and AlphaFold
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Feiyu Zhao, Tao Zhang, Xiaodi Sun, Xiyun Zhang, Letong Chen, Hejun Wang, Jinze Li, Peng Fan, Liangxue Lai, Tingting Sui, and Zhanjun Li
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Science - Abstract
Abstract The small size of the Cas nuclease fused with various effector domains enables a broad range of function. Although there are several ways of reducing the size of the Cas nuclease complex, no efficient or generalizable method has been demonstrated to achieve protein miniaturization. In this study, we establish an Interaction, Dynamics and Conservation (IDC) strategy for protein miniaturization and generate five compact variants of Cas13 with full RNA binding and cleavage activity comparable the wild-type enzymes based on a combination of IDC strategy and AlphaFold2. In addition, we construct an RNA base editor, mini-Vx, and a single AAV (adeno-associated virus) carrying a mini-RfxCas13d and crRNA expression cassette, which individually shows efficient conversion rate and RNA-knockdown activity. In summary, these findings highlight a feasible strategy for generating downsized CRISPR/Cas13 systems based on structure predicted by AlphaFold2, enabling targeted degradation of RNAs and RNA editing for basic research and therapeutic applications.
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- 2023
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4. Distinct disease mutations in DNMT3A result in a spectrum of behavioral, epigenetic, and transcriptional deficits
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Diana C. Beard, Xiyun Zhang, Dennis Y. Wu, Jenna R. Martin, Alyssa Erickson, Jane Valeriane Boua, Nicole Hamagami, Raylynn G. Swift, Katherine B. McCullough, Xia Ge, Austin Bell-Hensley, Hongjun Zheng, Cory W. Palmer, Nicole A. Fuhler, Austin B. Lawrence, Cheryl A. Hill, Thomas Papouin, Kevin K. Noguchi, Audrey McAlinden, Joel R. Garbow, Joseph D. Dougherty, Susan E. Maloney, and Harrison W. Gabel
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CP: Neuroscience ,Biology (General) ,QH301-705.5 - Abstract
Summary: Phenotypic heterogeneity in monogenic neurodevelopmental disorders can arise from differential severity of variants underlying disease, but how distinct alleles drive variable disease presentation is not well understood. Here, we investigate missense mutations in DNA methyltransferase 3A (DNMT3A), a DNA methyltransferase associated with overgrowth, intellectual disability, and autism, to uncover molecular correlates of phenotypic heterogeneity. We generate a Dnmt3aP900L/+ mouse mimicking a mutation with mild to moderate severity and compare phenotypic and epigenomic effects with a severe R878H mutation. P900L mutants exhibit core growth and behavioral phenotypes shared across models but show subtle epigenomic changes, while R878H mutants display extensive disruptions. We identify mutation-specific dysregulated genes that may contribute to variable disease severity. Shared transcriptomic disruption identified across mutations overlaps dysregulation observed in other developmental disorder models and likely drives common phenotypes. Together, our findings define central drivers of DNMT3A disorders and illustrate how variable epigenomic disruption contributes to phenotypic heterogeneity in neurodevelopmental disease.
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- 2023
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5. Optimizing human α-galactosidase for treatment of Fabry disease
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William C. Hallows, Kristen Skvorak, Nick Agard, Nikki Kruse, Xiyun Zhang, Yu Zhu, Rachel C. Botham, Chinping Chng, Charu Shukla, Jessica Lao, Mathew Miller, Antoinette Sero, Judy Viduya, Moulay Hicham Alaoui Ismaili, Kerryn McCluskie, Raphael Schiffmann, Adam P. Silverman, Jin-Song Shen, and Gjalt W. Huisman
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Medicine ,Science - Abstract
Abstract Fabry disease is caused by a deficiency of α-galactosidase A (GLA) leading to the lysosomal accumulation of globotriaosylceramide (Gb3) and other glycosphingolipids. Fabry patients experience significant damage to the heart, kidney, and blood vessels that can be fatal. Here we apply directed evolution to generate more stable GLA variants as potential next generation treatments for Fabry disease. GLAv05 and GLAv09 were identified after screening more than 12,000 GLA variants through 8 rounds of directed evolution. Both GLAv05 and GLAv09 exhibit increased stability at both lysosomal and blood pH, stability to serum, and elevated enzyme activity in treated Fabry fibroblasts (19-fold) and GLA–/– podocytes (10-fold). GLAv05 and GLAv09 show improved pharmacokinetics in mouse and non-human primates. In a Fabry mouse model, the optimized variants showed prolonged half-lives in serum and relevant tissues, and a decrease of accumulated Gb3 in heart and kidney. To explore the possibility of diminishing the immunogenic potential of rhGLA, amino acid residues in sequences predicted to bind MHC II were targeted in late rounds of GLAv09 directed evolution. An MHC II-associated peptide proteomics assay confirmed a reduction in displayed peptides for GLAv09. Collectively, our findings highlight the promise of using directed evolution to generate enzyme variants for more effective treatment of lysosomal storage diseases.
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- 2023
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6. Correction: A spatial vaccination strategy to reduce the risk of vaccine-resistant variants.
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Xiyun Zhang, Gabriela Lobinska, Michal Feldman, Eddie Dekel, Martin A Nowak, Yitzhak Pilpel, Yonatan Pauzner, Baruch Barzel, and Ady Pauzner
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Biology (General) ,QH301-705.5 - Abstract
[This corrects the article DOI: 10.1371/journal.pcbi.1010391.].
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- 2023
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7. Epidemic spreading under mutually independent intra- and inter-host pathogen evolution
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Xiyun Zhang, Zhongyuan Ruan, Muhua Zheng, Jie Zhou, Stefano Boccaletti, and Baruch Barzel
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Science - Abstract
Abstract The dynamics of epidemic spreading is often reduced to the single control parameter R 0 (reproduction-rate), whose value, above or below unity, determines the state of the contagion. If, however, the pathogen evolves as it spreads, R 0 may change over time, potentially leading to a mutation-driven spread, in which an initially sub-pandemic pathogen undergoes a breakthrough mutation. To predict the boundaries of this pandemic phase, we introduce here a modeling framework to couple the inter-host network spreading patterns with the intra-host evolutionary dynamics. We find that even in the extreme case when these two process are driven by mutually independent selection forces, mutations can still fundamentally alter the pandemic phase-diagram. The pandemic transitions, we show, are now shaped, not just by R 0, but also by the balance between the epidemic and the evolutionary timescales. If mutations are too slow, the pathogen prevalence decays prior to the appearance of a critical mutation. On the other hand, if mutations are too rapid, the pathogen evolution becomes volatile and, once again, it fails to spread. Between these two extremes, however, we identify a broad range of conditions in which an initially sub-pandemic pathogen can breakthrough to gain widespread prevalence.
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- 2022
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8. A spatial vaccination strategy to reduce the risk of vaccine-resistant variants.
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Xiyun Zhang, Gabriela Lobinska, Michal Feldman, Eddie Dekel, Martin A Nowak, Yitzhak Pilpel, Yonatan Pauzner, Baruch Barzel, and Ady Pauzner
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Biology (General) ,QH301-705.5 - Abstract
The COVID-19 pandemic demonstrated that the process of global vaccination against a novel virus can be a prolonged one. Social distancing measures, that are initially adopted to control the pandemic, are gradually relaxed as vaccination progresses and population immunity increases. The result is a prolonged period of high disease prevalence combined with a fitness advantage for vaccine-resistant variants, which together lead to a considerably increased probability for vaccine escape. A spatial vaccination strategy is proposed that has the potential to dramatically reduce this risk. Rather than dispersing the vaccination effort evenly throughout a country, distinct geographic regions of the country are sequentially vaccinated, quickly bringing each to effective herd immunity. Regions with high vaccination rates will then have low infection rates and vice versa. Since people primarily interact within their own region, spatial vaccination reduces the number of encounters between infected individuals (the source of mutations) and vaccinated individuals (who facilitate the spread of vaccine-resistant strains). Thus, spatial vaccination may help mitigate the global risk of vaccine-resistant variants.
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- 2022
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9. New technology to improve the thermal stability of botulinum toxin type D by biomimetic mineralization
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Shengqing Li, Xiyun Zhang, Guoyuan Hu, Shuping Li, Zhining Li, Yuxia Fan, and Yanming Zhang
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Medicine ,Science - Abstract
Abstract The advanced biomimetic mineralization technology was applied to protect the Botulinum neurotoxin type D, and the processing of the mineralization granule of botulinum toxin type D was successfully screened. The loss of activity of the toxin protein at different temperatures and the destructive strength of the gastrointestinal tract against the toxin were determined biologically. The lethal toxicity of the mineralized toxin to wild rodents was determined by median lethal dose. Protective tests at different temperatures showed that the preservation period of botulinum toxin type D mineralized sample 2 was significantly higher than that of the control group at three different temperatures, and its toxicity loss was significantly reduced. The damage intensity of the mineralized toxin to the gastrointestinal contents of plateau zokor and plateau pika was significantly reduced. The minimum lethal doses of the mineralized toxin particles to plateau zokor, plateau pika, and mice were 5200, 8,600,000, and 25,000 MLD/kg. These results showed that biomimetic mineralization could greatly improve the thermal stability of botulinum toxin type D and reduce the damaging effect of the gastrointestinal contents of target animals to botulinum toxin type D. The mineralized toxin could be used to control the population density of urban rodents. This research provides new insights into the protection of toxin protein substances.
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- 2021
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10. Fucosyltransferase 2: A Genetic Risk Factor for Intestinal Diseases
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Mingyang Hu, Xiyun Zhang, Jinze Li, Luotong Chen, Xiaolin He, and Tingting Sui
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FUT2 ,histoblood group antigens ,inflammatory bowel disease ,intestinal microbiota ,ulcerative colitis (UC) ,Crohn's disease ,Microbiology ,QR1-502 - Abstract
The fucosyltransferase 2 gene (FUT2) mediates the synthesis of histoblood group antigens (HBGA) that occur in vivo from multiple organs, particularly on the surface of intestinal epithelial cells and body fluids. To date, many studies have demonstrated that the interaction of HBGA with the host microbiota is the cause of pathogenesis of intestinal diseases, making FUT2 non-secretor a risk factor for inflammatory bowel disease (IBD) due to the lack of HBGA. As HBGA also acts as an attachment site for norovirus (NoV) and rotavirus (RV), the non-secretor becomes a protective factor for both viral infections. In addition, the interaction of norovirus and rotavirus with symbiotic bacteria has been found to play an important role in regulating enteroviral infection in IBD. Given the current incomplete understanding of the complex phenomenon and the underlying pathogenesis of intestinal diseases such as IBD, it has recently been hypothesized that the FUT2 gene regulates intestinal bacteria through attachment sites, may help to unravel the role of FUT2 and intestinal flora in the mechanism of intestinal diseases in the future, and provide new ideas for the prevention and treatment of intestinal diseases through more in-depth studies.
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- 2022
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11. A review of hard carbon anode: Rational design and advanced characterization in potassium ion batteries
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Hang Lei, Jinliang Li, Xiyun Zhang, Liang Ma, Zhong Ji, Zilong Wang, Likun Pan, Shaozao Tan, and Wenjie Mai
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advanced characterization ,hard carbon ,heteroatom doping ,potassium ion batteries ,structural engineering ,Materials of engineering and construction. Mechanics of materials ,TA401-492 ,Information technology ,T58.5-58.64 - Abstract
Abstract K‐ion batteries (KIBs) have attracted tremendous attention and seen significant development because of their low price, high operating voltage, and properties similar to those of Li‐ion batteries. In the field of development of full batteries, exploring high‐performing and low‐cost anode materials for K‐ion storage is a crucial challenge. Owing to their excellent cost effectiveness, abundant precursors, and environmental benignancy, hard carbons (HCs) are considered promising anode materials for KIBs. As a result, researchers have devoted much effort to quantify the properties and to understand the underlying mechanisms of HC‐based anodes. In this review, we mainly introduce the electrochemical reaction mechanism of HCs in KIBs, and summarize approaches to further improve the electrochemical performance in HC‐based materials for K‐ion storage. In addition, we also highlight some advanced in situ characterization methods for understanding the evolutionary process underlying the potassiation–depotassiation process, which is essential for the directional electrochemical performance optimization of KIBs. Finally, we raise some challenges in developing smart‐structured HC anode materials for KIBs, and propose rational design principles and perspectives serving as the guidance for the targeted optimization of HC‐based KIBs.
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- 2022
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12. Impact of Abusive Supervision on Psychological Engagement and Absorptive Capacity Among Students: Mediating Role of Knowledge Hiding
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Xiyun Zhang and Jiawen Yu
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abusive supervisory behavior ,knowledge hiding ,absorptive capacity ,psychological engagement ,organizational psychology ,Psychology ,BF1-990 - Abstract
The research aims to estimate the impact of abusive supervision on psychological engagement and absorptive capacity under the mediating role of knowledge hiding. This study was cross-sectional and data were collected from employees of four different sectors through a questionnaire. The convenient sampling technique was used to collect data from 450 employees. Structural equation modeling (SEM) was used as a data analysis technique because the two-stage SEM technique produces precise and accurate estimates while modeling the path analysis. The output of the measurement model assessment confirmed that all measurement scales were reliable. In addition to this, structural model assessment confirmed that abusive supervision did not significantly predict the absorptive capacity and psychological engagement, although knowledge hiding negatively predicted psychological engagement.
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- 2022
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13. Maize Lodging Resistance with Plastic Film Removal, Increased Planting Density, and Cultivars with Different Maturity Periods
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Xiyun Zhang, Jun Xue, Ming Tian, Guoqiang Zhang, Bo Ming, Keru Wang, Peng Hou, Ruizhi Xie, Qiuxiang Tang, and Shaokun Li
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maize lodging ,plastic film mulch ,no-film planting ,stalk strength ,vertical root-pulling force ,Botany ,QK1-989 - Abstract
While plastic film mulching and proper high-density planting are important methods that can improve maize yield, years of accumulated residual film have created soil pollution and degraded soil, and thus has impeded sustainable agriculture development. Here, we compared the stalk and root lodging resistances of three maize cultivars grown at two planting densities both with (FM) and without (NM) plastic film mulch. Our aim was to provide a theoretical basis that may help assure a future of successful no-film planting with increased planting density. The results showed that, compared with FM, the average dry weight per unit length and bending strength of basal internode decreased for all cultivars at both planting densities in the NM treatment. At 9.0 × 104 plants ha−1, the stalk breaking force (SFC) of Xinyu77, KWS9384, and KWS2030 in the NM treatment decreased by 4%, 21%, and 22%, respectively. At 12.0 × 104 plants ha−1, SFC of Xinyu77 and KWS2030 increased by 14% and 1%, respectively, while KWS9384 decreased by 10%. Additionally, the root diameter, length, volume, width, depth, and the vertical root-pulling force of maize decreased. Although the lodging resistance of maize grown without film mulch was lower than that of maize grown with it, those adverse effects can be mitigated by selecting suitable cultivars and by using proper high-density planting and appropriate cultivation measures.
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- 2022
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14. Coevolving Dynamics between Epidemic and Information Spreading considering the Dependence between Vigilance and Awareness Prevalence
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Yixiao Zhang, Xing Lu, Ni Cui, Jingtai Tang, and Xiyun Zhang
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Electronic computers. Computer science ,QA75.5-76.95 - Abstract
It has been demonstrated that the propagation of information and awareness regarding a disease can assist in containing the outbreak of epidemics. Previous models for this coevolving usually introduced the dependence between these two processes by setting a lower but time-independent infection rate for individuals with awareness. However, a realistic scenario can be more complicated, as individual vigilance and the adopted protective measures may depend on the extent of the discussion on the disease, whereas individuals may be irrational or lack relevant knowledge, leading to improper measures being taken. These can introduce a time-varying dependence between epidemic dynamics and awareness prevalence and may weaken the effect of spreading awareness in containing a pandemic. To better understand this effect, we introduce a nonlinear dependence of the epidemic infection rate on awareness prevalence, focusing on the effect of different forms of dependence on the coevolving dynamics. We demonstrate that a positive correlation between vigilance and awareness prevalence can enhance the effect of information spreading in suppressing epidemics. However, this enhancement can be weakened if some individuals are irrational. Our results demonstrate the importance of rational behavior in the strategy of containing epidemics by propagation of disease information.
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- 2021
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15. Network Physiology of Cortico–Muscular Interactions
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Rossella Rizzo, Xiyun Zhang, Jilin W. J. L. Wang, Fabrizio Lombardi, and Plamen Ch. Ivanov
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network physiology ,dynamic networks ,time delay stability ,bursts ,synchronization ,brain waves ,Physiology ,QP1-981 - Abstract
Skeletal muscle activity is continuously modulated across physiologic states to provide coordination, flexibility and responsiveness to body tasks and external inputs. Despite the central role the muscular system plays in facilitating vital body functions, the network of brain-muscle interactions required to control hundreds of muscles and synchronize their activation in relation to distinct physiologic states has not been investigated. Recent approaches have focused on general associations between individual brain rhythms and muscle activation during movement tasks. However, the specific forms of coupling, the functional network of cortico-muscular coordination, and how network structure and dynamics are modulated by autonomic regulation across physiologic states remains unknown. To identify and quantify the cortico-muscular interaction network and uncover basic features of neuro-autonomic control of muscle function, we investigate the coupling between synchronous bursts in cortical rhythms and peripheral muscle activation during sleep and wake. Utilizing the concept of time delay stability and a novel network physiology approach, we find that the brain-muscle network exhibits complex dynamic patterns of communication involving multiple brain rhythms across cortical locations and different electromyographic frequency bands. Moreover, our results show that during each physiologic state the cortico-muscular network is characterized by a specific profile of network links strength, where particular brain rhythms play role of main mediators of interaction and control. Further, we discover a hierarchical reorganization in network structure across physiologic states, with high connectivity and network link strength during wake, intermediate during REM and light sleep, and low during deep sleep, a sleep-stage stratification that demonstrates a unique association between physiologic states and cortico-muscular network structure. The reported empirical observations are consistent across individual subjects, indicating universal behavior in network structure and dynamics, and high sensitivity of cortico-muscular control to changes in autonomic regulation, even at low levels of physical activity and muscle tone during sleep. Our findings demonstrate previously unrecognized basic principles of brain-muscle network communication and control, and provide new perspectives on the regulatory mechanisms of brain dynamics and locomotor activation, with potential clinical implications for neurodegenerative, movement and sleep disorders, and for developing efficient treatment strategies.
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- 2020
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16. Dynamics of oscillators globally coupled via two mean fields
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Xiyun Zhang, Arkady Pikovsky, and Zonghua Liu
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Medicine ,Science - Abstract
Abstract Many studies of synchronization properties of coupled oscillators, based on the classical Kuramoto approach, focus on ensembles coupled via a mean field. Here we introduce a setup of Kuramoto-type phase oscillators coupled via two mean fields. We derive stability properties of the incoherent state and find traveling wave solutions with different locking patterns; stability properties of these waves are found numerically. Mostly nontrivial states appear when the two fields compete, i.e. one tends to synchronize oscillators while the other one desynchronizes them. Here we identify normal branches which bifurcate from the incoherent state in a usual way, and anomalous branches, appearance of which cannot be described as a bifurcation. Furthermore, hybrid branches combining properties of both are described. In the situations where no stable traveling wave exists, modulated quasiperiodic in time dynamics is observed. Our results indicate that a competition between two coupling channels can lead to a complex system behavior, providing a potential generalized framework for understanding of complex phenomena in natural oscillatory systems.
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- 2017
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17. Non-equilibrium critical dynamics of bursts in θ and δ rhythms as fundamental characteristic of sleep and wake micro-architecture.
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Jilin W J L Wang, Fabrizio Lombardi, Xiyun Zhang, Christelle Anaclet, and Plamen Ch Ivanov
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Biology (General) ,QH301-705.5 - Abstract
Origin and functions of intermittent transitions among sleep stages, including short awakenings and arousals, constitute a challenge to the current homeostatic framework for sleep regulation, focusing on factors modulating sleep over large time scales. Here we propose that the complex micro-architecture characterizing the sleep-wake cycle results from an underlying non-equilibrium critical dynamics, bridging collective behaviors across spatio-temporal scales. We investigate θ and δ wave dynamics in control rats and in rats with lesions of sleep-promoting neurons in the parafacial zone. We demonstrate that intermittent bursts in θ and δ rhythms exhibit a complex temporal organization, with long-range power-law correlations and a robust duality of power law (θ-bursts, active phase) and exponential-like (δ-bursts, quiescent phase) duration distributions, typical features of non-equilibrium systems self-organizing at criticality. Crucially, such temporal organization relates to anti-correlated coupling between θ- and δ-bursts, and is independent of the dominant physiologic state and lesions, a solid indication of a basic principle in sleep dynamics.
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- 2019
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18. Signal processing in Network Physiology: quantifying network dynamics of organ interactions.
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Plamen Ch. Ivanov, Jilin W. J. L. Wang, and Xiyun Zhang
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- 2020
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19. Bubble transfer spectral entropy and its application in epilepsy EEG analysis.
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Yujia Mi, Aijing Lin, Danlei Gu, Xiyun Zhang, and Xiaolin Huang
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- 2022
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20. Lilly's Technique for Delayed Hemorrhage After Choledochal Cyst Radical Surgery
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Weifang Wu, Jiachen Zheng, Yongqin Ye, Xiyun Zhang, Qianqian Mei, Jingjie Guo, Hongyu Lyu, and Bin Wang
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Surgery - Published
- 2023
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21. N-doped carbon nanowire array confined cobalt phosphides as efficient bifunctional electrocatalysts for water splitting
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Shunlian Ning, Qikai Wu, Yuguang Zhu, Shilong Liu, Wei Zhou, Luo Mi, Kai Zhou, Dengke Zhao, Xiyun Zhang, and Nan Wang
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Inorganic Chemistry - Abstract
A copper foam supported N-doped carbon nanowire array confined CoP nanoparticle hybrid (CoP@NCNWAs/CF) as an efficient bifunctional electrocatalyst for overall water splitting.
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- 2023
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22. The piperazine pyrophosphate intumescent flame retardant of polypropylene composites prepared by selective laser sintering
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Tianyu Zhao, Wei Wu, Huanbo Hu, Zhengguo Rui, Xiyun Zhang, and Jianshuo Li
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Polymers and Plastics ,Materials Chemistry ,Ceramics and Composites ,General Chemistry - Published
- 2022
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23. Study on the Emotional Labor of Young International Chinese Teachers
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Xiyun Zhang
- Abstract
This paper uses educational ethnography to examine in depth the emotional labor of the development of the particular professional identity of young international Chinese teachers and the underlying mechanisms behind emotions. The study found that the performance and strategy of young international Chinese teachers' emotional labor was dominated by deep acting, and that professional self-esteem, professional constraint, and cross-cultural conflict were important factors contributing to the emotional labor overload of this professional group. Although emotional labor constructs the meaning of daily life, it also reinforces this group's sense of self-alienation and professional burnout. Based on this, it is important to pay attention to the professional needs of young international Chinese teachers, establish a community mechanism for international Chinese teachers, and improve the professional assessment system for young international Chinese teachers in order to promote the maintenance of emotional labor at a normal and reasonable level, reduce emotional exhaustion, and enhance job satisfaction and professional gain.
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- 2022
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24. The synergism effect of montmorillonite on the intumescent flame retardant thermoplastic polyurethane composites prepared by selective laser sintering
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Jianshuo Li, Wei Wu, Huanbo Hu, Zhengguo Rui, Tianyu Zhao, and Xiyun Zhang
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Polymers and Plastics ,Materials Chemistry ,Ceramics and Composites ,General Chemistry - Published
- 2022
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25. False Sincerity: College Students' Ritualistic Praise from the Perspective of Interactive Ritual Chains
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Xiyun Zhang
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Aesthetics ,media_common.quotation_subject ,Perspective (graphical) ,Sincerity ,Praise ,Psychology ,media_common - Abstract
In the modern society where the pressure of interpersonal communication is increasing, the ritualistic interactions represented by mutual praise reinterprets the interpersonal communication behavior of youth groups to some extent. In traditional interpersonal interaction, the connotation of sincerity, affirmation and identification represented by "praise" has been deprived and replaced. According to the needs of social interaction and individual emotional needs, college students have given new connotation to "praise", showing a changing trend from sincere praise to deliberate flattering. Based on this, this paper puts forward the concept of "ritualistic praise", and analyzes the causes and influences of this phenomenon from the perspective of interactive ritual chains, to get a glimpse of the emotional life patterns of young people in the context of modern interpersonal communication.
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- 2021
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26. Amplified signal response by cluster synchronization competition in rings with short-distance couplings
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Xiaoming Liang, Lei Hua, Xiyun Zhang, and Liang Zhao
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- 2022
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27. An Engineered T7 RNA Polymerase for efficient co-transcriptional capping with reduced dsRNA byproducts in mRNA synthesis
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Mathew Miller, Oscar Alvizo, Chinping Chng, Stephan Jenne, Melissa Mayo, Arpan Mukherjee, Stuart Sundseth, Avinash Chintala, Jonathan Penfield, James Riggins, Xiyun Zhang, Antoinette Sero, Justin Dassie, Neil Leatherbury, Scott Baskerville, and Gjalt Huisman
- Abstract
Messenger RNA (mRNA) therapies have recently gained tremendous traction with the approval of mRNA vaccines for the prevention of SARS-CoV-2 infection. However, manufacturing challenges have complicated large scale mRNA production, which is necessary for the clinical viability of these therapies. Not only can the incorporation of the required 5’ 7-methylguanosine cap analog be inefficient and costly, in vitro transcription (IVT) using wild-type T7 RNA polymerase generates undesirable double-stranded RNA (dsRNA) byproducts that elicit adverse host immune responses and are difficult to remove at large scale. To overcome these challenges, we have engineered a novel RNA polymerase, T7-68, that co-transcriptionally incorporates both di- and tri-nucleotide cap analogs with high efficiency, even at reduced cap analog concentrations. We also demonstrate that IVT products generated with T7-68 have reduced dsRNA content.
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- 2022
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28. The combination of <scp>AlN</scp> and <scp>h‐BN</scp> for enhancing the thermal conductivity of <scp>thermoplastic polyurethane</scp> composites prepared by selective laser sintering
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Xiyun Zhang, Wei Wu, Tianyu Zhao, and Jianshuo Li
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Polymers and Plastics ,Materials Chemistry ,General Chemistry ,Surfaces, Coatings and Films - Published
- 2022
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29. Female Body in The House of Mirth from the Perspective of 'Gaze Theory'
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Xiyun Zhang and Hongbin Dai
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Cultural Studies ,History ,Psychoanalysis ,Literature and Literary Theory ,media_common.quotation_subject ,Perspective (graphical) ,Upper class ,Sociology ,Gaze ,media_common - Abstract
In The House of Mirth, modern American female writer Edith Wharton depicts a young woman named Lily Bart, who is struggling in the upper class of old New York society, but is eventually abandoned b...
- Published
- 2021
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30. Effect of layered double hydroxide on the flame retardancy of intumescent flame retardant thermoplastic polyurethane composites prepared by selective laser sintering
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Jianshuo Li, Wei Wu, Xiyun Zhang, Tianyu Zhao, Zhengyi Wang, and Shuo Li
- Subjects
Polymers and Plastics ,Materials Chemistry ,General Chemistry ,Surfaces, Coatings and Films - Published
- 2022
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31. A chemoenzymatic strategy for site-selective functionalization of native peptides and proteins
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Anna Fryszkowska, Chihui An, Oscar Alvizo, Goutami Banerjee, Keith A. Canada, Yang Cao, Duane DeMong, Paul N. Devine, Da Duan, David M. Elgart, Iman Farasat, Donald R. Gauthier, Erin N. Guidry, Xiujuan Jia, Jongrock Kong, Nikki Kruse, Katrina W. Lexa, Alexey A. Makarov, Benjamin F. Mann, Erika M. Milczek, Vesna Mitchell, Jovana Nazor, Claudia Neri, Robert K. Orr, Peter Orth, Eric M. Phillips, James N. Riggins, Wes A. Schafer, Steven M. Silverman, Christopher A. Strulson, Nandhitha Subramanian, Rama Voladri, Hao Yang, Jie Yang, Xiang Yi, Xiyun Zhang, and Wendy Zhong
- Subjects
Multidisciplinary ,Lysine ,Humans ,Insulin ,Amino Acid Sequence ,Penicillin Amidase ,Peptides ,Protein Engineering - Abstract
The emergence of new therapeutic modalities requires complementary tools for their efficient syntheses. Availability of methodologies for site-selective modification of biomolecules remains a long-standing challenge, given the inherent complexity and the presence of repeating residues that bear functional groups with similar reactivity profiles. We describe a bioconjugation strategy for modification of native peptides relying on high site selectivity conveyed by enzymes. We engineered penicillin G acylases to distinguish among free amino moieties of insulin (two at amino termini and an internal lysine) and manipulate cleavable phenylacetamide groups in a programmable manner to form protected insulin derivatives. This enables selective and specific chemical ligation to synthesize homogeneous bioconjugates, improving yield and purity compared to the existing methods, and generally opens avenues in the functionalization of native proteins to access biological probes or drugs.
- Published
- 2022
32. Optimal signal amplification in globally coupled bistable oscillators: The role of weight between positive and negative couplings
- Author
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Xiuxiu Kang, Huimei Xu, Yingchen Jiang, Xiaoming Liang, and Xiyun Zhang
- Subjects
Computational Theory and Mathematics ,General Physics and Astronomy ,Statistical and Nonlinear Physics ,Mathematical Physics ,Computer Science Applications - Abstract
Recently, it was revealed that uniformly positive and negative couplings perform complementary roles in the signal amplification of coupled bistable oscillators. However, the coupling weights between oscillators are usually nonuniform due to adaptivity in many nonlinear systems. For this reason, we introduce a weight ratio of positive and negative couplings and investigate how it affects the response of globally coupled bistable oscillators to a subthreshold signal. We show that the weight ratio can significantly optimize the system response to the subthreshold signal compared to the case of uniform couplings. Finally, we propose a reduced model and compare its analytical approximations with the numerical results.
- Published
- 2022
- Full Text
- View/download PDF
33. Resonance induced by mixed couplings in a three-node motif
- Author
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Xiyun Zhang, Cong Liu, and Xiaoming Liang
- Subjects
Physics ,Coupling ,Quantitative Biology::Neurons and Cognition ,Bistability ,Artificial neural network ,Applied Mathematics ,Mechanical Engineering ,Aerospace Engineering ,Ocean Engineering ,Inhibitory postsynaptic potential ,01 natural sciences ,Molecular physics ,Pitchfork bifurcation ,medicine.anatomical_structure ,Control and Systems Engineering ,0103 physical sciences ,medicine ,Excitatory postsynaptic potential ,Motif (music) ,Neuron ,Electrical and Electronic Engineering ,010301 acoustics - Abstract
Inspired by the coexistence of excitatory and inhibitory neurons in real neural networks, we propose a motif of three coupled nodes, one with positive coupling and two with negative couplings, for signal amplification. Utilizing the bistable overdamped oscillator as well as the excitable neuron models, we show that the response of the motif is optimized for an intermediate range of coupling strength, i.e., coupling-induced resonance. Through theoretical analyses, we find that the underlying mechanism for the resonance is an abrupt pitchfork bifurcation caused by the mixed positive and negative couplings.
- Published
- 2020
- Full Text
- View/download PDF
34. Noise-induced coexisting firing patterns in hybrid-synaptic interacting networks
- Author
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Xinyi Wang, Xiyun Zhang, Muhua Zheng, Leijun Xu, and Kesheng Xu
- Subjects
Statistics and Probability ,Quantitative Biology::Neurons and Cognition ,Biological Physics (physics.bio-ph) ,FOS: Physical sciences ,Statistical and Nonlinear Physics ,Physics - Biological Physics - Abstract
Synaptic noise plays a major role in setting up coexistence of various firing patterns, but the precise mechanisms whereby these synaptic noise contributes to coexisting firing activities are subtle and remain elusive. To investigate these mechanisms, neurons with hybrid synaptic interaction in a balanced neuronal networks have been recently put forward. Here we show that both synaptic noise intensity and excitatory weights can make a greater contribution than variance of synaptic noise to the coexistence of firing states with slight modification parameters. The resulting statistical analysis of both voltage trajectories and their spike trains reveals two forms of coexisting firing patterns: time-varying and parameter-varying multistability. The emergence of time-varying multistability as a format of metstable state has been observed under suitable parameters settings of noise intensity and excitatory synaptic weight. While the parameter-varying multistability is accompanied by coexistence of synchrony state and metastable (or asynchronous firing state) with slightly varying noise intensity and excitatory weights. Our results offer a series of precise statistical explanation of the intricate effect of synaptic noise in neural multistability. This reconciles previous theoretical and numerical works, and confirms the suitability of various statistical methods to investigate multistability in a hybrid synaptic interacting neuronal networks., 15 pages,8 figures
- Published
- 2023
- Full Text
- View/download PDF
35. Application of percolation model in spreading dynamics driven by social networks big data
- Author
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Cong Li, Jiarong Xie, Jinghui Wang, Yutian Zeng, Tianshou Zhou, Xiyun Zhang, and Yanqing Hu
- Subjects
General Physics and Astronomy - Abstract
Spreading dynamics is a common yet sophisticated phenomenon in real life, and percolation theory is widely applied in analysis of this dynamics due to its conciseness and efficiency. With the development of information technology, the quality and quantity of available data are being improved. Although this offers a chance to describe and understand empirical spreading phenomena more comprehensively and accurately, complicated dynamics brought by massive data pose new challenges to the study of social contagion based on percolation theory. In this prospective, we show, by analyzing examples, how the percolation theory is used to describe the information transmission on social networks driven by big data. We also explore the indirect influence mechanism behind the spread of scientific research behavior, and develop a new algorithm to quantify the global influence of nodes from the local topology. Finally, we propose, based on these example studies, several possible new directions of percolation theory in the study of social contagion driven by big data.
- Published
- 2023
- Full Text
- View/download PDF
36. Linear Hypothesis Testing in Ultra High Dimensional Generalized Linear Mixed Models
- Author
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Xiyun Zhang and Zaixing Li
- Subjects
History ,Polymers and Plastics ,Business and International Management ,Industrial and Manufacturing Engineering - Published
- 2022
- Full Text
- View/download PDF
37. Influence of coupling asymmetry on signal amplification in a three-node motif
- Author
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Xiaoming Liang, Chao Fang, Xiyun Zhang, and Huaping Lü
- Subjects
General Physics and Astronomy - Abstract
The three-node feedforward motif has been revealed to function as a weak signal amplifier. In this motif, two nodes (input nodes) receive a weak input signal and send it unidirectionally to the third node (output node). Here, we change the motif’s unidirectional couplings (feedforward) to bidirectional couplings (feedforward and feedback working together). We find that a small asymmetric coupling, in which the feedforward effect is stronger than the feedback effect, may enable the three-node motif to go through two distinct dynamic transitions, giving rise to a double resonant signal response. We present an analytical description of the double resonance, which agrees with the numerical findings.
- Published
- 2023
- Full Text
- View/download PDF
38. Short-term plasticity as a mechanism to regulate and retain multistability
- Author
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Xinjia Zhou, Changhai Tian, Xiyun Zhang, Muhua Zheng, and Kesheng Xu
- Subjects
General Mathematics ,Applied Mathematics ,General Physics and Astronomy ,Statistical and Nonlinear Physics - Published
- 2022
- Full Text
- View/download PDF
39. Multi-dimensional fillers synergistically enhanced thermal conductivity of TPU composites in selective laser sintering technology
- Author
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Xiyun Zhang, Wei Wu, Huanbo Hu, Zhengguo Rui, Xiangyun Du, Tianyu Zhao, and Jianshuo Li
- Subjects
Mechanics of Materials ,Materials Chemistry ,General Materials Science - Published
- 2022
- Full Text
- View/download PDF
40. A spatial vaccination strategy to reduce the risk of vaccine-resistant variants
- Author
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Ady Pauzner, Xiyun Zhang, Martin A. Nowak, Michal Feldman, Yonatan Pauzner, Baruch Barzel, Eddie Dekel, Yitzhak Pilpel, and Gabriela Lobinska
- Subjects
Immunity, Herd ,Vaccines ,Ecology ,Vaccination ,COVID-19 ,Biology ,Virology ,Cellular and Molecular Neuroscience ,Computational Theory and Mathematics ,Modeling and Simulation ,Genetics ,Humans ,Pandemics ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics - Abstract
The process of vaccinating the world population against COVID-19 is expected to take well over a year to complete. As vaccination progresses and population immunity increases, a counteracting relaxation of social distancing measures is observed. The result will be a prolonged period of high disease prevalence combined with a fitness advantage for vaccine-resistant variants, implying a considerably increased probability that a resistant variant will spread in the population. In this paper we propose a spatial vaccination strategy that has the potential to dramatically reduce this risk. Instead of spreading the vaccination effort equally throughout a country, distinct geographic regions of the country are sequentially vaccinated, quickly bringing each to effective herd immunity. Regions with high vaccination rates will then have low infection rates and vice versa. Since people primarily interact with others in their own region, spatial vaccination will reduce the number of encounters between infected people (the source of mutations) and vaccinated people (who facilitate the spread of vaccine-resistant strains). Thus with proper logistic preparations, a spatial vaccination campaign could be highly effective in reducing the global risk of vaccine-resistant variants.
- Published
- 2021
- Full Text
- View/download PDF
41. Signal amplification enhanced by large phase disorder in coupled bistable units
- Author
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Xiaoming Liang and Xiyun Zhang
- Subjects
Synchronization (alternating current) ,Physics ,Bistability ,Subthreshold conduction ,Robustness (computer science) ,Phase (waves) ,Waveform ,Network topology ,Molecular physics ,Signal - Abstract
We study the maximum response of network-coupled bistable units to subthreshold signals focusing on the effect of phase disorder. We find that for signals with large levels of phase disorder, the network exhibits an enhanced response for intermediate coupling strength, while generating a damped response for low levels of phase disorder. We observe that the large phase-disorder-enhanced response depends mainly on the signal intensity but not on the signal frequency or the network topology. We show that a zero average activity of the units caused by large phase disorder plays a key role in the enhancement of the maximum response. With a detailed analysis, we demonstrate that large phase disorder can suppress the synchronization of the units, leading to the observed resonancelike response. Finally, we examine the robustness of this phenomenon to the unit bistability, the initial phase distribution, and various signal waveform. Our result demonstrates a potential benefit of phase disorder on signal amplification in complex systems.
- Published
- 2021
- Full Text
- View/download PDF
42. Distinct spreading patterns induced by coexisting channels in information spreading dynamics
- Author
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Jiao Wu, Kesheng Xu, Xiyun Zhang, and Muhua Zheng
- Subjects
Applied Mathematics ,Humans ,General Physics and Astronomy ,Statistical and Nonlinear Physics ,Models, Theoretical ,Mathematical Physics ,Disease Outbreaks ,Probability - Abstract
In modern society, new communication channels and social platforms remarkably change the way of people receiving and sharing information, but the influences of these channels on information spreading dynamics have not been fully explored, especially in the aspects of outbreak patterns. To this end, based on a susceptible–accepted–recovered model, we examined the outbreak patterns of information spreading in a two-layered network with two coexisting channels: the intra-links within a layer and the inter-links across layers. Depending on the inter-layer coupling strength, i.e., average node degree and transmission probability between the two layers, we observed three different spreading patterns: (i) a localized outbreak with weak inter-layer coupling, (ii) two peaks with a time-delay outbreak appear for an intermediate coupling, and (iii) a synchronized outbreak for a strong coupling. Moreover, we showed that even though the average degree between the two layers is small, a large transmission probability still can compensate and promote the information spread from one layer to another, indicating by that the critical average degree decreases as a power law with transmission probability between the two layers. Additionally, we found that a large gap closed to the critical inter-layer average degree appears in the phase space of theoretical analysis, which indicates the emergence of a global large-scope outbreak. Our findings may, therefore, be of significance for understanding the outbreak behaviors of information spreading in real world.
- Published
- 2022
- Full Text
- View/download PDF
43. Epidemic spreading under pathogen evolution
- Author
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Boccaletti Stefano, Muhua Zheng, Ruan Zhongyuan, Jie Zhou, Xiyun Zhang, and Baruch Barzel
- Subjects
Vaccination ,Mutation rate ,Race (biology) ,Coronavirus disease 2019 (COVID-19) ,Vaccination Campaigns ,Mutation (genetic algorithm) ,Development economics ,Pandemic ,Biology ,Pathogen - Abstract
Battling a widespread pandemic is an arms race between our mitigation efforts, e.g., social distancing or vaccination, and the pathogen's evolving persistence. This is being observed firsthand during the current COVID-19 crisis, as novel mutations are constantly challenging our global vaccination race. To address this, we introduce here a general framework for epidemic spreading under pathogen evolution, which shows that mutations can fundamentally alter the projection of the spread. Specifically, we detect a new pandemic phase - the mutated phase - in which, despite the fact that the pathogen is initially non-pandemic (R0 < 1), it may still spread due to the emergence of a critical mutation. The boundaries of this phase portray a balance between the epidemic and the evolutionary time-scales. If the mutation rate is too low, the pathogen prevalence decays prior to the appearance of a critical mutation. On the other hand, if mutations are too rapid, the pathogen evolution becomes volatile and, once again, it fails to spread. Between these two extremes, however, a broad range of conditions exists in which an initially sub-pandemic pathogen will eventually gain prevalence. This is especially relevant during vaccination, which creates, as it progresses, increasing selection pressure towards vaccine-resistance. To overcome this, we show that vaccination campaigns must be accompanied by fierce mitigation efforts, to suppress the potential rise of a resistant mutant strain.
- Published
- 2021
- Full Text
- View/download PDF
44. Epidemic spreading under mutually independent intra- and inter-host pathogen evolution
- Author
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Xiyun Zhang, Zhongyuan Ruan, Muhua Zheng, Jie Zhou, Stefano Boccaletti, and Baruch Barzel
- Subjects
Physics - Physics and Society ,Multidisciplinary ,FOS: Biological sciences ,Populations and Evolution (q-bio.PE) ,General Physics and Astronomy ,FOS: Physical sciences ,General Chemistry ,Physics and Society (physics.soc-ph) ,Quantitative Biology - Populations and Evolution ,Epidemics ,General Biochemistry, Genetics and Molecular Biology - Abstract
The dynamics of epidemic spreading is often reduced to the single control parameter R0 (reproduction-rate), whose value, above or below unity, determines the state of the contagion. If, however, the pathogen evolves as it spreads, R0 may change over time, potentially leading to a mutation-driven spread, in which an initially sub-pandemic pathogen undergoes a breakthrough mutation. To predict the boundaries of this pandemic phase, we introduce here a modeling framework to couple the inter-host network spreading patterns with the intra-host evolutionary dynamics. We find that even in the extreme case when these two process are driven by mutually independent selection forces, mutations can still fundamentally alter the pandemic phase-diagram. The pandemic transitions, we show, are now shaped, not just by R0, but also by the balance between the epidemic and the evolutionary timescales. If mutations are too slow, the pathogen prevalence decays prior to the appearance of a critical mutation. On the other hand, if mutations are too rapid, the pathogen evolution becomes volatile and, once again, it fails to spread. Between these two extremes, however, we identify a broad range of conditions in which an initially sub-pandemic pathogen can breakthrough to gain widespread prevalence.
- Published
- 2021
45. Signal processing in Network Physiology: quantifying network dynamics of organ interactions
- Author
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Jilin W. J. L. Wang, Xiyun Zhang, and Plamen Ch. Ivanov
- Subjects
Signal processing ,Complex dynamics ,Computer science ,Association (object-oriented programming) ,0202 electrical engineering, electronic engineering, information engineering ,Physiology ,020206 networking & telecommunications ,020201 artificial intelligence & image processing ,02 engineering and technology ,Network dynamics ,Synchronization - Abstract
A fundamental problem in new field of Network Physiology is how organ systems in the human body dynamically interact to coordinate and synchronize their functions, and integrate as a network to generate distinct states and behaviours at the organism level. Physiological systems exhibit complex dynamics, operate at different time scales, and are regulated by multi-component mechanisms, which poses challenges to studying physiologic coupling and network interactions. We present a method based on the concept of time delay stability to probe transient physiologic network interactions in a group of healthy subjects during sleep. We investigate the multi-layer network structure and dynamics of interactions among (i) physiologically relevant brain rhythms within and across cortical locations, (ii) brain rhythms and key peripheral organ systems, and (iii) organ systems with each other. We demonstrate that each physiologic state (sleep stage) is characterized by a specific network structure and link strength distribution, and that the entire physiological network undergoes hierarchical reorganization across layers with transition from one stage to another. Our findings are consistent across subjects, and indicate a robust association of network structure and dynamics with physiologic state and function. The presented approach provides a new framework to explore physiologic states through networks of organ interactions.
- Published
- 2021
- Full Text
- View/download PDF
46. Symbolic Recurrence Quantification Analysis and its Application
- Author
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Yuan Chebn, Aijing Lin, Xiyun Zhang, and Xiaolin Huang
- Subjects
History ,Polymers and Plastics ,Business and International Management ,Industrial and Manufacturing Engineering - Published
- 2021
- Full Text
- View/download PDF
47. The New Frontier of Network Physiology: Emerging Physiologic States in Health and Disease from Integrated Organ Network Interactions
- Author
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Plamen Ch. Ivanov, Xiyun Zhang, Jilin W. J. L. Wang, and Bolun Chen
- Subjects
Complex dynamics ,Computer science ,Healthy subjects ,One stage ,Physiology ,Network structure ,Disease ,Physiologic States ,Organism ,Organ system - Abstract
An intriguing question in the new field of Network Physiology is how organ systems in the human body dynamically interact to coordinate functions, to maintain healthy homeostasis, and to generate distinct physiological states and behaviors at the organism level. Physiological systems exhibit complex dynamics, operate at different time scales and are regulated by multi-component mechanisms, which poses challenges to studying physiologic coupling and network interactions among systems with diverse dynamics. We present a conceptual framework and a method based on the concept of time delay stability to probe transient physiologic network interactions in a group of healthy subjects during sleep. We investigate the multi-layer network structure and dynamics of interactions among (i) physiologically relevant brain rhythms within and across cortical locations, (ii) brain rhythms and key peripheral organ systems, and (iii) the network structure and dynamics among peripheral organ systems across distinct physiological states. We demonstrate that each physiologic state (sleep stage) is characterized by a specific network structure and link strength distribution. The entire physiological network undergoes hierarchical reorganization across layers with the transition from one stage to another. Our findings are consistent across subjects and indicate a robust association of organ network structure and dynamics with physiologic state and function. The presented Network Physiology approach provides a new framework to explore physiologic states under health and disease through networks of organ interactions.
- Published
- 2021
- Full Text
- View/download PDF
48. Quantum mechanical design of enzyme active sites
- Author
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Xiyun Zhang, DeChancie, Jason, Gunaydin, Hakan, Chowdry, Arnab B., Clemente, Fernando R., Smith, Adam J.T., Handel, T.M., and Houk, K.N.
- Subjects
Quantum theory -- Observations ,Enzyme kinetics -- Research ,Binding sites (Biochemistry) -- Research ,Binding sites (Biochemistry) -- Chemical properties ,Biological sciences ,Chemistry - Abstract
The design of active sites is carried out by using quantum mechanical calculations in order to predict the rate-determining transition state of a reaction in presence of the optimal arrangement of catalytic functional groups. The theozymes are very good candidates that can be used as active site models for design purpose.
- Published
- 2008
49. Role of lurkers in threshold-driven information spreading dynamics
- Author
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Zhongyuan Ruan, Bin Yu, Qi Xuan, and Xiyun Zhang
- Subjects
Dual role ,Social network ,business.industry ,Dynamics (music) ,Computer science ,Node (circuits) ,Threshold model ,business ,Topology - Abstract
The threshold model as a classical paradigm for studying information spreading processes has been well studied. The main focuses are on how the underlying social network structure or the size of initial seeds can affect the cascading dynamics. However, the influence of node characteristics has been largely ignored. Here, inspired by empirical observations, we extend the threshold model by taking into account lurking nodes, who rarely interact with their neighbors. In particular, we consider two different scenarios: (i) Lurkers are absolutely silent and never interact with others and (ii) lurkers intermittently interact with their neighborhood with an activity rate $p$. In the first case, we demonstrate that lurkers may reduce the effective average degree of the underlying network, playing a dual role in spreading dynamics. In the latter case, we find that the stochastic dynamic behavior of lurkers could significantly promote the spread of information. Concretely, slightly raising the activity rate $p$ of lurkers may result in a remarkable increase in the final cascade size. Further increasing $p$ could make nodes become more stable on average, while it is still easy to observe global cascades due to the fluctuations of the effective degree of nodes.
- Published
- 2020
50. Diversity-induced resonance for optimally suprathreshold signals
- Author
-
Xiaoming Liang, Liang Zhao, and Xiyun Zhang
- Subjects
Bistability ,Models, Neurological ,General Physics and Astronomy ,Action Potentials ,01 natural sciences ,Signal ,Vibration ,010305 fluids & plasmas ,0103 physical sciences ,Waveform ,Computer Simulation ,010306 general physics ,Mathematical Physics ,Resonance effect ,Physics ,Neurons ,Quantitative Biology::Neurons and Cognition ,Coupling strength ,Subthreshold conduction ,Applied Mathematics ,Resonance ,Statistical and Nonlinear Physics ,respiratory system ,Amplitude ,Biological system ,human activities - Abstract
Recent research has revealed that a system of coupled units with a certain degree of parameter diversity can generate an enhanced response to a subthreshold signal compared to that without diversity, exhibiting a diversity-induced resonance. We here show that diversity-induced resonance can also respond to a suprathreshold signal in a system of globally coupled bistable oscillators or excitable neurons, when the signal amplitude is in an optimal range close to the threshold amplitude. We find that such diversity-induced resonance for optimally suprathreshold signals is sensitive to the signal period for the system of coupled excitable neurons, but not for the coupled bistable oscillators. Moreover, we show that the resonance phenomenon is robust to the system size. Furthermore, we find that intermediate degrees of parameter diversity and coupling strength jointly modulate either the waveform or the period of collective activity of the system, giving rise to the resonance for optimally suprathreshold signals. Finally, with low-dimensional reduced models, we explain the underlying mechanism of the observed resonance. Our results extend the scope of the diversity-induced resonance effect.
- Published
- 2020
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