91,902 results on '"XinXin"'
Search Results
2. From gene to therapy: a review of deciphering the role of ABCD1 in combating X-Linked adrenoleukodystrophy
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Xinxin Zuo and Zeyu Chen
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X-linked adrenoleukodystrophy (X-ALD) ,Very-long-chain fatty acids (VLCFAs) ,Genetic mutations ,ABCD1 ,Neurological decline ,Gene therapy ,Nutritional diseases. Deficiency diseases ,RC620-627 - Abstract
Abstract X-linked adrenoleukodystrophy (X-ALD) is a severe genetic disorder caused by ABCD1 mutations, resulting in the buildup of very-long-chain fatty acids, leading to significant neurological decline and adrenal insufficiency. Despite advancements in understanding the mechanisms of X-ALD, its pathophysiology remains incompletely understood, complicating the development of effective treatments. This review provides a comprehensive overview of X-ALD, with a focus on the genetic and biochemical roles of ABCD1 and the impacts of its mutations. Current therapeutic approaches are evaluated, discussing their limitations, and emphasizing the need to fully elucidate the pathogenesis of X-ALD. Additionally, this review highlights the importance of international collaboration to enhance systematic data collection and advance biomarker discovery, ultimately improving patient outcomes with X-ALD.
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- 2024
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3. Predicting first-line VEGFR-TKI resistance and survival in metastatic clear cell renal cell carcinoma using a clinical-radiomic nomogram
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Yichen Wang, Xinxin Zhang, Sicong Wang, Hongzhe Shi, Xinming Zhao, and Yan Chen
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Metastatic clear cell renal cell carcinoma ,VEGFR-TKI therapy ,Early resistance ,Predicting model ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background This study aims to construct predicting models using radiomic and clinical features in predicting first-line vascular endothelial growth factor receptor-tyrosine kinase inhibitor (VEGFR-TKI) early resistance in metastatic clear cell renal cell carcinoma (mccRCC) patients. We also aim to explore the correlation of predicting models with short and long-term survival of mccRCC patients. Materials and methods In this retrospective study, 110 mccRCC patients from 2009 to 2019 were included and assigned into training and test sets. Radiomic features were extracted from tumor 3D-ROI of baseline enhanced CT images. Radiomic features were selected by Lasso method to construct a radiomic score. A combined nomogram was established using the combination of radiomic score and clinical factors. The discriminative abilities of the radiomic, clinical and combined nomogram were quantified using ROC curve. Cox regression analysis was used to test the correlation of nomogram score with progression-free survival (PFS) and overall survival (OS). PFS and OS were compared between different risk groups by log-rank test. Results The radiomic, clinical and combined nomogram demonstrated AUCs of 0.81, 0.75, and 0.83 in training set; 0.79, 0.77, and 0.88 in test set. Nomogram score ≥ 1.18 was an independent prognostic factor of PFS (HR 0.22 (0.10, 0.47), p
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- 2024
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4. Global burden and cross-country health inequalities of early-onset colorectal cancer and its risk factors from 1990 to 2021 and its projection until 2036
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Jinhai Zhang, Dehua Ou, Aosi Xie, Diqun Chen, and Xinxin Li
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Early-onset colorectal cancer ,Global burden of disease ,Disability-adjusted life years ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Purpose To explore the worldwide, regional, and country-specific burden of early-onset colorectal cancer (EO-CRC) and identify its associated risk factors between 1990 and 2021, and to project its incidence and mortality rates for 2036. Methods We acquired data on EO-CRC categorized by gender, socio-demographic index (SDI), and risk factors based on the Global Burden of Disease (GBD) Study 2021. Joinpoint regression analysis was utilized to explore the variation in disease burden. The autoregressive integrated moving average (ARIMA) model was performed to forecast the disease burden up to 2036. Results Globally, the incidence rate, prevalence rate, mortality rate, and disability-adjusted life years (DALYs) rate of EO-CRC were estimated at 5.37 (95%UI: 4.91 to 5.86)/100,000, 34 (95%UI: 30.96 to 37.35)/100,000, 2.01 (95%UI: 1.84 to 2.19)/100,000, and 101.37 (95%: 92.85 to 110.18)/100,000 in 2021. The prevalence and incidence rates of EO-CRC showed an ascending trajectory, whilst the DALYs and mortality rates demonstrated a downward trajectory between 1990 to 2021. The high-middle SDI regions and East Asia exhibited the highest EO-CRC burden among the five SDI regions and 21 GBD regions respectively. A low-whole-grains diet was the chief risk factor contributing to EO-CRC. It was predicted that the age-standardized rate (ASR) of EO-CRC incidence would increase by 5.56%, while the ASR of mortality would decrease by 13.9% globally until 2036. Conclusion The current and future global burden of EO-CRC is heavy and varies significantly across different regions and countries.
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- 2024
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5. Gallbladder cancer incidence and mortality rate trends in China: analysis of data from the population-based cancer registry
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Xinzhou Zhang, Chenyun Xu, Han Zhang, Xinxin Du, Quanyu Zhang, Manman Lu, Yanrong Ma, and Wenjun Ma
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Gallbladder cancer ,China ,Age-period-cohort analysis ,Incidence rate ,Mortality rate ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Gallbladder cancer is a major health concern in China, and awareness of the associated incidence and mortality rates is particularly important given the aging population. Objective To determine trends in gallbladder cancer incidence and mortality rates over 12 years and quantitatively analyze the influence of demographic factors on these rates in China. Methods We performed a retrospective study of 98,860 Chinese citizens using the Chinese Cancer Registry, a national database. Gallbladder cancer incidence and mortality data pertaining to patients treated between 2005 and 2017 were collected. Joinpoint regression models were used to estimate the annual percentage change (APC) and average APC (AAPC). We used age-period-cohort analyses and decomposition methods to investigate differing trends in incidence and mortality. Results The age-standardized gallbladder cancer incidence and mortality rates in China trended downward between 2005 and 2017, with AAPCs of -2.023% and -1.603%, respectively. Coefficients of age effect for incidence rate increased with age up to 70 years and peaked at 70–79 years, while coefficients of age effect for the mortality rate showed a consistent increase with age. Both coefficients of period for incidence and mortality rates increased in more recent periods; in terms of the cohort effect, coefficients of cohort for rates generally decreased in later birth years but showed a partial rise between 1982 and 1996. The crude incidence rates of gallbladder cancer according to demographic and non-demographic factors were 626.09% and -526.09% respectively (366.23% and -266.23% among men, and 6068.93% and -5968.93% among women, respectively). The rates were 543.01% and -443.01%, respectively, in urban areas and were 68.22% and 31.78%, respectively, in rural areas. The mortality rates according to demographic and non-demographic factors were -495.93% and 595.93%, respectively (-1763.10% and -1863.10% for men and -270.56% and -370.56% for women, respectively). These rates were -930.33% and 1030.33%, respectively, in urban areas and were 101.48% and -1.48%, respectively, in rural areas. Conclusions The overall standardized gallbladder cancer incidence and mortality rates in China are trending downward, but not sufficiently so. Proper living and eating habits should be encouraged while exploring the establishment of long-term, standardized gallbladder cancer screening programs.
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- 2024
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6. Correction: ISG15 and ISGylation modulates cancer stem cell-like characteristics in promoting tumor growth of anaplastic thyroid carcinoma
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Tong Xu, Chaozhuang Zhu, Jinming Chen, Feifeng Song, Xinxin Ren, Shanshan Wang, Xiaofen Yi, Yiwen Zhang, Wanli Zhang, Qing Hu, Hui Qin, Yujia Liu, Song Zhang, Zhuo Tan, Zongfu Pan, Ping Huang, and Minghua Ge
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2024
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7. Thermo-gaseous-mechanical coupling phase-field model for brittle crack propagation in tungsten
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Yuanyuan Wang, Xinxin Hou, and Yan-Dong Wang
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Tungsten ,Phase-field model ,Crack propagation ,Multi-physics field ,Mining engineering. Metallurgy ,TN1-997 - Abstract
Modeling of crack deflection/penetration as intergranular/transgranular fracture in the polycrystal under the coupled thermo-gaseous-mechanical multi-physics field has long been a challenge for both fracture mechanics and materials science. The current developed model builds upon a coupled mechanics, gas diffusion and temperature gradient, driven by minimizing the energy function. The time-dependent variables are solved in an implicit integration framework, where displacement, gas concentration, temperature and damage variable are the primary ones. The proposed fracture model is particularly appropriate for capturing the change of crack path in nuclear-grade tungsten (W) on account of temperature- and gas-dependent mechanical parameters. The significant contributions are three-fold: (1) the Young's modulus, Poisson's ratio and fracture energy at the given temperature and gas concentration can be automatically identified; (2) the transformation mode related to the angle between grain boundary (GB) axis and loading direction and the misorientation between two adjacent grains is predicted in the absence and presence of gas; (3) the comparative analysis of crack characteristics under constant temperature and temperature gradient is conducted with a focus on crack growth rate and crack path. The model is validated by comparing our simulated data with available experimental and numerical results. This work could have profound implications for evaluating the catastrophic failure in the extreme environment and providing guidance on optimizing the microstructure of W.
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- 2024
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8. Dynamic trajectories of left ventricular ejection fraction in heart failure with improved ejection fraction
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Yang Jiang, Xuefu Chen, Xinxin Zhang, Shuang Dong, and Ying Liu
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Heart failure with improved ejection fraction ,Dynamic trajectories ,Left ventricular ejection fraction ,Prognosis ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Abstract Background Heart failure with improved ejection fraction (HFimpEF) has been regarded as a new heart failure (HF) type in 2022. However, studies on the impact of left ventricular ejection fraction (LVEF) trajectories on the prognosis of patients with HFimpEF are scarce. In this study, we investigated dynamic trajectories of LVEF and different clinical outcomes in HFimpEF. Methods and results This was a multi-center study included patients diagnosed with HF with reduced ejection fraction (HFrEF) between January 1, 2015, and October 31, 2022. Enrolled patients were divided into HFimpEF and persistent HFrEF groups. To further investigate different LVEF trajectories in HFimpEF patients, they were classified into persistent HFimpEF and transient HFimpEF subgroups. Adverse clinical outcomes encompassed all-cause death, cardiovascular death, and HF-related rehospitalization. A total of 734 patients were included (HFimpEF: n = 162; persistent HFrEF: n = 572). Cox regression analysis revealed that compared with persistent HFrEF, patients with HFimpEF experienced a lower risk of all-cause and cardiovascular death. Subgroup analysis determined that only 113 (69.75%) patients maintained an LVEF exceeding 40%. Cox regression analysis revealed that persistent HFimpEF patients had a lower risk of all-cause and cardiovascular death compared to those with transient HFimpEF. Finally, multivariate logistic analysis showed that gender and high-density lipoprotein cholesterol levels were independent predictors of persistent HFimpEF. Conclusions HFimpEF does not accurately represent HF recovery, given that there are different trajectories of LVEF in HFimpEF. Patients with persistent HFimpEF experience better clinical outcomes, highlighting clinicians should identify clinical modifiable factors to maintain a stable HF stage for better prognosis. Trial registration ChiCTR2400086622, 08/07/2024.
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- 2024
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9. N6-methyladenosine regulators in hepatocellular carcinoma: investigating the precise definition and clinical applications of biomarkers
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Xiaokai Yan, Yao Qi, Xinyue Yao, Lulu Yin, Hao Wang, Ji Fu, Guo Wan, Yanqun Gao, Nanjing Zhou, Xinxin Ye, Xiao Liu, and Xing Chen
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Hepatocellular carcinoma ,m6A regulators ,Large-scale data analysis ,Precise definition of biomarkers ,Risk models ,Clinical applications ,Biology (General) ,QH301-705.5 - Abstract
Abstract Background Accurately identifying effective biomarkers and translating them into clinical practice have significant implications for improving clinical outcomes in hepatocellular carcinoma (HCC). In this study, our objective is to explore appropriate methods to improve the accuracy of biomarker identification and investigate their clinical value. Methods Concentrating on the N6-methyladenosine (m6A) modification regulators, we utilized dozens of multi-omics HCC datasets to analyze the expression patterns and genetic features of m6A regulators. Through the integration of big data analysis with function experiments, we have redefined the biological roles of m6A regulators in HCC. Based on the key regulators, we constructed m6A risk models and explored their clinical value in estimating prognosis and guiding personalized therapy for HCC. Results Most m6A regulators exhibit abnormal expression in HCC, and their expression is influenced by copy number variations (CNV) and DNA methylation. Large-scale data analysis has revealed the biological roles of many key m6A regulators, and these findings are well consistent with experimental results. The m6A risk models offer significant prognostic value. Moreover, they assist in reassessing the therapeutic potential of drugs such as sorafenib, gemcitabine, CTLA4 and PD1 blockers in HCC. Conclusions Our findings suggest that the mutual validation of big data analysis and functional experiments may facilitate the precise identification and definition of biomarkers, and our m6A risk models may have the potential to guide personalized chemotherapy, targeted treatment, and immunotherapy decisions in HCC.
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- 2024
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10. Exploring the mechanisms of chronic obstructive pulmonary disease and Crohn’s disease: a bioinformatics-based study
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Xinxin Zhang, Caiping Liu, Luqian Cao, Hongguang Tang, Haiyun Jiang, Changjing Hu, Xuehong Dong, Feiyang Zhou, Kunming Qin, Qiang Liu, Jinyang Shen, and Yue Zhou
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Crohn’s disease ,Chronic obstructive pulmonary disease ,Bioinformatics analysis ,Single-sample gene set enrichment algorithm ,Connectivity map ,Medicine ,Science - Abstract
Abstract This study explored the comorbid mechanisms between Crohn’s disease (CD) and chronic obstructive pulmonary disease (COPD) using bioinformatics analysis. From the Gene Expression Omnibus (GEO) microarray dataset, 349 common differentially expressed genes (coDEGs) were identified, and 8 shared hub genes were found: CCL2, CXCL1, TLR2, ICAM1, PTPRC, ITGAX, PTGS2, and MMP9, which were vital for immune function and regulation of inflammatory responses. In addition, the study also analyzed the association between coDEGs and immune cell infiltration using the single-sample gene set enrichment algorithm (ssGSEA). Potential drugs related to these genes were identified using the connectivity map (CMap). These findings provided new perspectives for understanding the interaction between CD and COPD.
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- 2024
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11. The therapeutic potential of Apigenin in amyotrophic lateral sclerosis through ALDH1A2/Nrf2/ARE signaling
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Huiting Liang, Xinhui Zhou, Jie Zhang, Wenyuan Xu, Yi Liu, Xinxin Wang, Yushu Hu, Renshi Xu, and Xiaobing Li
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SOD1*G93A ,Amyotrophic lateral sclerosis ,Apigenin ,ALDH1A2 ,Oxidative stress ,Therapeutics. Pharmacology ,RM1-950 ,Biochemistry ,QD415-436 - Abstract
Abstract Background Amyotrophic lateral sclerosis (ALS) is a progressive neurodegenerative disease characterized by motor neuron loss leading to muscle weakness and atrophy. Apigenin (APG), known for its antioxidant properties, holds potential as a therapeutic compound in ALS. Methods We used the Tg(SOD1*G93A)1Gur/J transgenic mouse model of ALS to investigate the therapeutic effects of APG. Key measured included motor function via the ALSTDI score, molecular markers of oxidative stress (OS) and apoptosis in spinal cord tissues. Techniques used included pathological, Western blotting, flow cytometry, and qRT-PCR to assess the effect of ALDH1A2. Results APG treatment attenuated weight loss and improved motor function scores in ALS mice compared to untreated ALS models. Molecular analyses revealed a significant upregulation of ALDH1A2 in APG-treated groups, along with a reduction in markers of OS and apoptosis. In vitro studies in NSC34 cells further confirmed the protective effects of APG against SOD1*G93A mutation-induced cytotoxicity. In addition, suppression of ALDH1A2 by shRNA exacerbated disease markers that were ameliorated by APG treatment. Conclusions Our results suggest that APG attenuates the progression of ALS pathology by regulating OS and apoptosis through ALDH1A2. These results support further investigation of APG as a potential therapeutic agent for the treatment of ALS. Graphical Abstract
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- 2024
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12. Cytosine base editors with increased PAM and deaminase motif flexibility for gene editing in zebrafish
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Yu Zhang, Yang Liu, Wei Qin, Shaohui Zheng, Jiawang Xiao, Xinxin Xia, Xuanyao Yuan, Jingjing Zeng, Yu Shi, Yan Zhang, Hui Ma, Gaurav K. Varshney, Ji-Feng Fei, and Yanmei Liu
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Science - Abstract
Abstract Cytosine base editing is a powerful tool for making precise single nucleotide changes in cells and model organisms like zebrafish, which are valuable for studying human diseases. However, current base editors struggle to edit cytosines in certain DNA contexts, particularly those with GC and CC pairs, limiting their use in modelling disease-related mutations. Here we show the development of zevoCDA1, an optimized cytosine base editor for zebrafish that improves editing efficiency across various DNA contexts and reduces restrictions imposed by the protospacer adjacent motif. We also create zevoCDA1-198, a more precise editor with a narrower editing window of five nucleotides, minimizing off-target effects. Using these advanced tools, we successfully generate zebrafish models of diseases that were previously challenging to create due to sequence limitations. This work enhances the ability to introduce human pathogenic mutations in zebrafish, broadening the scope for genomic research with improved precision and efficiency.
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- 2024
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13. Pear genomes display significant genetic diversity and provide novel insights into the fruit quality traits differentiation
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Baopeng Ding, Haifei Hu, Yunpeng Cao, Ruirui Xu, Yujing Lin, Tahir ul Qamar Muhammad, Yuqin Song, Guangqi He, Youzhi Han, Huangping Guo, Jun Qiao, Jianguo Zhao, Xinxin Feng, Sheng Yang, Xuhu Guo, Rajeev Kumar Varshney, and Liulin Li
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Pear ,Phased diploid genome ,Pangenome ,PAV ,Fruit quality ,Plant culture ,SB1-1110 - Abstract
The pear (Pyrus spp.) is well known for diverse flavors, textures, and global horticultural importance. However, the genetic diversity responsible for its extensive phenotypic variations remains largely unexplored. Here, we de novo assembled and annotated the genomes of the maternal (PsbM) and paternal (PsbF) lines of the hybrid ‘Yuluxiang’ pear and constructed the pear pangenome of 1.15 Gb by combining these two genomes with five previously published pear genomes representing cultivated and wild germplasm. Using the constructed pangenome, we identified 21 224 gene PAVs (Presence-absence variation) and 1 158 812 SNPs (Single Nucleotide Polymorphism) in the non-reference genome that were absent in the PsbM reference genome. Compared with SNP markers, PAV-based analysis provides additional insights into the pear population structure. In addition, some genes associated with pear fruit quality traits have differential occurrence frequencies and differential gene expression between Asian and European populations. Moreover, our analysis of the pear pangenome revealed a mutated SNP and an insertion in the promoter region of the gene PsbMGH3.1 potentially enhance sepal shedding in ‘Xuehuali’ which is vital for pear quality. PsbMGH3.1 may play a role in the IAA pathway, contributing to a distinct low-auxin phenotype observed in plants by heterologously overexpressing this gene. This research helps capture the genetic diversity of pear populations and provides genomic resources for accelerating breeding.
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- 2024
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14. Emergence of a novel multi-resistance-mediating integrative and conjugative element ICEPmu3 in Pasteurella multocida
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Jiao He, Zhishuang Yang, Mingshu Wang, Renyong Jia, Shun Chen, Mafeng Liu, Xinxin Zhao, Qiao Yang, Ying Wu, Shaqiu Zhang, Juan Huang, Xumin Ou, Di Sun, Bin Tian, Yu He, Zhen Wu, Anchun Cheng, and Dekang Zhu
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Agriculture (General) ,S1-972 - Published
- 2024
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15. Investigation of Spectral Parameters of Constricted arc Plasma for Controlling Welding Processes and Related Technologies
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Valeriy Chernyak, Volodymyr Korzhyk, Shiyi Gao, Vladyslav Khaskin, Oleksandr Voitenko, Yevhenii Illiashenko, Xinxin Wang, Andrii Grynyuk, Oksana Konoreva, and Iryna Sviridova
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welding ,arc plasma ,spectral parameters ,welding and related technologies ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
The paper is devoted to investigation of spectral parameters of constricted arc plasma, as a foundation for further development of basic approaches to intellectual controlling of plasma-arc technologies of material treatment and welding. The relevance of application of spectrometric analysis of the welding arc consists in obtaining the possibility of sufficiently accurate control of its temperature and energy input into the product being welded, recording initiation of weld defects (including internal pores), determination of atmospheric oxygen ingress into the weld pool, etc. The spectral composition, temperature and concentration of the constricted welding arc plasma were determined in the paper to more precisely define its physical characteristics at 80 and 100 A currents, in order to establish the further applicability of dynamic spectral analysis of a constricted plasma arc in control of welding processes. As modern spectrometers with CCD-detectors of the spectral range of 200÷1100 nm have the resolution of the order of 0.35 nm, which 2-3 times exceeds the quantization step by the measured wavelength, and may lead to considerable errors, an approach is proposed to increase the accuracy of spectrometric measurements to acceptable values. Radiation spectra of the constricted welding arc measured in the wavelength range of 650÷1000 nm allowed within the model of local thermodynamic equilibrium calculating the excitation temperature of the main spectral range components: Ar I and O I. It was established that the excitation temperature of electron levels of Ar atoms in the welding arc plasma only weakly depends on the discharge current, and it is equal to 13500 ± 500 K. Excitation temperature of O I electron levels was equal to 10000 ± 500 К at arc current of 100 A and to 7200 ± 500 К at 80 A current. Electron density of high-current welding arc plasma was measured by Stark broadening of Ar I lines (696.543; 772.4; 912.3 nm). It was found that with the rise of current of the constricted welding arc by 20%, an increase of charge concentration in the arc plasma by 1.5 times and of its temperature by 1.2 times are observed.
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- 2024
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16. The influence of ultrasonic vibration on micro-arc oxidation behaviour of manganese aluminium bronze
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Xiangzhe Meng, Liyang Zhu, Yanyan Li, Pengfei Hu, Guangyi Cai, Jiejun Liu, Qing Zhang, Zehua Dong, and Xinxin Zhang
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Aluminium bronze ,Micro-arc oxidation ,Ultrasonic vibration ,Anti-fouling ,Corrosion resistance ,Mining engineering. Metallurgy ,TN1-997 - Abstract
As a promising material for marine engineering, the insufficient corrosion resistance of manganese aluminium bronze (MAB) alloy when exposed to the marine environment may limit its application. In the present work, micro-arc oxidation (MAO) of MAB alloy was conducted in an aluminate-based electrolyte with the influence of ultrasonic vibration (UV) examined. A porous ceramic film has been successfully produced on MAB via MAO, which exhibits dramatic increases in both film thickness and compactness after the introduction of UV. As a result, the ceramic film produced by ultrasound-assisted MAO (UMAO) exhibits an enhanced corrosion resistance relative to that via MAO, which also possesses a desired antifouling capability. Hence, the present work illustrates the influence of UV on the MAO behaviour of non-valve alloys and, more importantly, provides theoretical guidance for related surface modification strategies in marine engineering.
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- 2024
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17. Role of the Polymer in the Emulsion Stability of an Amphoteric Polyacrylamide in Different Flooding Systems
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Jin Huang, Xinxin Xia, Huai Jiang, Yanjia Huo, Jinling Li, Wei Li, Xiaorong Ma, Feng Li, and Cuiqin Li
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Chemistry ,QD1-999 - Published
- 2024
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18. Modelling Method and Meshing Characteristics of a Novel Curve-Surface Conjugate Internal Gear Drive
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Xinxin Ye, Luhe Zhang, Dongyu Wang, Jingming Jiang, Wenjun Luo, and Bingkui Chen
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Internal gear drive ,Tooth surface geometry ,Error adaptability ,Transmission efficiency ,Ocean engineering ,TC1501-1800 ,Mechanical engineering and machinery ,TJ1-1570 - Abstract
Abstract Space exploration has become a major focus in the field of technology, with gear transmissions in aerospace equipment playing a crucial role. In the extreme environment of space, gear transmissions face challenges like large temperature differentials, deformation and maintenance difficulties, which will severely impact transmission accuracy and service life. To meet the growing demands for high-performance gear transmissions with high transmission efficiency and error adaptability in the aerospace field, this paper proposes a novel curve-surface conjugate internal gear drive consisting of an involute internal gear and a curve-surface gear. The fundamental theory of curve-surface conjugation is introduced, and the construction method for curve-surface gear based on a selected contact path and meshing tube is presented. The analysis models including induced curvature, sliding ratio and tooth contact analysis with errors (ETCA) are simulated to evaluate the meshing characteristics. Additionally, prototypes are manufactured and experimental setups are established to validate the transmission performance. These results indicate that as the rotational speed increases, the transmission efficiency of the curve-surface conjugate internal gear drive improves, which is contrary to the trend observed in involute gear drives. And the transmission efficiency of the curve-surface conjugate internal gear drive surpasses that of the involute gear drive at higher rotational speeds. Moreover, this novel gear drive exhibits excellent error adaptability, maintaining intact contact paths and high transmission efficiency even in the presence of assembly errors. This study provides new ideas for the design and manufacture of high-performance gear transmissions from the perspective of spatial geometric elements.
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- 2024
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19. Response of the gut microbiota to changes in the nutritional status of red deer during winter
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Jinhao Guo, Zheng Li, Xinxin Liu, Yongchao Jin, Yue Sun, Ziao Yuan, Weiqi Zhang, Jialong Wang, and Minghai Zhang
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Ungulates ,Nutritional status ,Population conservation ,Gut microbes ,Metagenomic sequencing ,Medicine ,Science - Abstract
Abstract Unravelling abrupt alterations in the gut microbiota of wild species associated with nutritional stress is imperative but challenging for wildlife conservation. This study assessed the nutritional status of wild red deer during winter on the basis of changes in faecal nitrogen (FN) and urea nitrogen/creatinine (UN: C) levels and identified gut microbes associated with nutritional status via nutritional control experiments and metagenomic sequencing. The FN of wild red deer in winter 2022 was significantly lower than that in winter 2021 (p
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- 2024
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20. Development and validation of a novel endoplasmic reticulum stress-related lncRNAs signature in osteosarcoma
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Peichuan Xu, Jinghong Yuan, Kaihui Li, Yameng Wang, Zhiwen Wu, Jiangminghao Zhao, Tao Li, Tianlong Wu, Xinxin Miao, Dingwen He, and Xigao Cheng
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Medicine ,Science - Abstract
Abstract Osteosarcoma (OS) is a cancerous tumor, and its development is greatly influenced by long non-coding RNA (lncRNA). Endoplasmic reticulum stress (ERS) is an essential biological defense process in cells and contributes to the progression of tumors. However, the exact mechanisms remain elusive. This study aims to develop a signature of lncRNAs associated with ERS in OS. This signature will guide the prognosis prediction and the determination of appropriate treatment strategies. The UCSC Xena database collected transcriptional and clinical data of OS and muscle, after identifying ERS differentially expressed genes, we utilized correlation analysis to determine the endoplasmic reticulum stress lncRNAs (ERLs). The Least Absolute Shrinkage and Selection Operator (LASSO) and Cox regression analysis were utilized to develop an ERLs signature. To clarify the fundamental mechanisms controlling gene expression in low and high-risk groups, Gene Set Variation Analysis (GSVA) were conducted. In addition, the distinction between the two groups regarding drug sensitivity and immune-related activity was investigated to determine the immunotherapy effects. Utilizing RT-qPCR, the expression of model lncRNAs in OS cell lines was ascertained. The functional analysis of LINC02298 was carried out through in vitro experiments and pan-cancer analysis. This study successfully constructed an ERLs prognostic signature for OS, which comprised 5 lncRNAs (AC023157.3, AL031673.1, LINC02298, LINC02328, SNHG26). The risk signature predicted overall survival in patients with OS and was confirmed by assessing the validation and whole cohorts. Further, it was discovered that individuals classified as high-risk displayed suppressed immune activation, decreased infiltration of immune cells, and decreased responsiveness to immunotherapy. The RT-qPCR showed that the constructed risk prognosis model is reliable. Experimental validation has demonstrated that LINC02298 can promote OS cells’ invasion, migration, and proliferation. In addition, LINC02298 exhibited significant differential expression in many types of cancer. Moreover, LINC02298 is an important biomarker in a variety of tumors. This study established a novel ERLs signature, which successfully predicted the prognosis of OS. The function of LINC02298 in OS was elucidated via in vitro experiments. Therefore, it offers new opportunities for predicting the clinical prognosis of OS and establishes the basis for targeted therapy in OS.
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- 2024
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21. The broad-spectrum deubiquitinating enzyme inhibitor PR-619 protects retinal ganglion cell and augments parkin-mediated mitophagy in experimental glaucoma
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Xinxin Hu, Juntao Zhang, Haixia Ma, Wei Lian, Wenqiu Song, Chao Du, Shengcan Chen, Dandan Wang, Jiaqi Wei, and Qinkang Lu
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PR-619 ,Parkin ,Mitophagy ,Retinal ganglion cell ,Glaucoma ,Medicine ,Science - Abstract
Abstract Glaucoma is a leading cause of irreversible visual impairment worldwide, characterized by the progressive death of retinal ganglion cells (RGCs). Deubiquitinating enzyme (DUB) inhibitors have shown promise as pharmacological interventions for neurodegenerative disorders. Our study focuses on the pan-DUB inhibitor PR-619 and its potential neuroprotective effects on RGCs through modulation of parkin-mediated mitophagy in experimental glaucoma models. The results show that impaired mitophagy exists in RGCs of our experimental glaucomatous model. In vivo, PR-619 increased RGCs survival in glaucomatous rats. In vitro, it protected RGCs against excitotoxicity and reduced ubiquitin-specific protease (USP) 15 expression. Additionally, PR-619 upregulated parkin expression, increased LC3-II/LC3-I ratios, and elevated LAMP1 levels, indicating enhanced mitophagy in vivo and in vitro. Moreover, numbers of mitophagosomes were increased in optic nerves of PR-619-treated ocular hypertensive rats in vivo. Furthermore, parkin knockdown negated the salutary effects of PR-619 and attenuated expression of parkin-dependent mitophagy effectors in RGCs subjected to glutamate excitotoxicity in vitro. Collectively, these findings implicate augmented parkin-mediated mitophagy as the mechanistic substrate underscoring the neuroprotective capacity of PR-619 in experimental glaucoma. These revelations engender the prospect that pharmacological agents or biotherapeutics augmenting parkin-mediated mitophagy may proffer viable therapeutic modalities for glaucomatous neurodegeneration characterized by impaired mitophagy.
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- 2024
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22. Whole-genome sequencing analyses and antibiotic resistance situation of 48 Helicobacter pylori strains isolated in Zhejiang, China
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Yunhui Fang, Shiman Jiang, Xinxin Zhou, Wangxiao Zhou, Xinrong Jiang, Lifeng Chen, Mengting Wang, Yunbo Chen, and Lanjuan Li
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Helicobacter pylori ,Antibiotic-resistant mutations ,Whole-genome sequencing ,Multilocus sequence typing ,Structure population ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Abstract Purpose In the Zhejiang region, research on Helicobacter pylori is lacking. The purpose of this study was to assess the extent of antibiotic resistance in H. pylori in this region, explore alternative methods for predicting the resistance patterns of H. pylori, and investigate the colonization of native gastric mucosa by other clades of H. pylori in the structure population of this bacterium. Methods Strains were cultured under microaerobic conditions, and antimicrobial susceptibility testing (AST) was performed via agar dilution. Whole-genome sequencing (WGS) was performed via next-generation sequencing (NGS) technology. Epidemiological data including data from this study and reported articles from Zhejiang, China, were included. Further analyses based on AST, WGS, and epidemiological date include virulence genes, antibiotic resistance-related mutations, and phylogenetic trees based on 7 housekeeping genes and core-genome single nucleotide polymorphisms (SNPs). Results The bacterial isolates in this study presented higher antibiotic resistance rates than previously reported, especially against levofloxacin and clarithromycin. The point mutation A2147G in 23 S rRNA is specific to clarithromycin resistance. Mutations at position/s 87 and/or 91 of the gyrA gene amino acid sequence are highly consistent with levofloxacin resistance highly. The point mutations C1707T in 23 S rRNA and E463K in the gyrB gene have not been previously documented in China. All the bacterial isolates belong to Asian branches in the structure population. The resistance rate to clarithromycin of isolates from hosts born after January 1, 1977 is statistically higher than that of hosts born before 1977. Conclusion Eradication therapy based on AST results is urgently needed in Zhejiang. The point mutation A2147G in 23 S rRNA and point mutations in the gyrA gene at amino acid/s 87 and/or 91 are sufficient for predicting resistance to clarithromycin and levofloxacin, respectively. The isolate with the mutation E463K in the gyrB gene represents a significant contribution to the field. Mutations in 23 S rRNA may offer valuable insights into the dynamics of H. pylori transmission among hosts.
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- 2024
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23. N-glycosylation of the envelope glycoprotein I is essential for the proliferation and virulence of the duck plague virus
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Yaru Ning, Mingshu Wang, Anchun Cheng, Qiao Yang, Bin Tian, Xumin Ou, Di Sun, Yu He, Zhen Wu, Xinxin Zhao, Shaqiu Zhang, Ying Wu, Juan Huang, Yanling Yu, Ling Zhang, Renyong Jia, Mafeng Liu, Dekang Zhu, and Shun Chen
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Duck plague virus ,virulence gene ,glycoprotein I ,N-glycosylation ,pathogenicity ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Duck plague virus (DPV) causes the highly pathogenic duck plague, and the envelope glycoprotein I (gI), as one of the key virulence genes, has not yet had its critical virulence sites identified through screening. This study used reverse genetics technology to target the gI, specifically within the DPV genome. Four DPV mutants with gI N-glycosylation site mutations were designed and constructed, and these mutant strains were successfully rescued. Our results confirmed that three asparagine residues of gI (N69, N78, and N265) are N-glycosylation sites, and western blot analysis substantiated that glycosylation at each predicted N-glycosylation site was compromised. The deglycosylation of gI leads to the protein misfolding and subsequent retention in the endoplasmic reticulum (ER). The subsequent deglycosylated gI is carried into the Golgi apparatus (GM130) in the interaction of gE. Compared to the parental virus, the mutated virus shows a 66.3% reduction in intercellular transmission capability. In ducks, the deglycosylation of gI significantly reduces DPV replication in vivo, thereby weakening the virulence of DPV. This study represents the first successful creation of a weak DPV virus strain by specific mutation at the N-glycosylation site. The findings provide a foundational understanding of DPV pathogenesis and form the basis for developing live attenuated vaccines against the disease.
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- 2024
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24. Erianin inhibits the progression of pancreatic cancer by directly targeting AKT and ASK1
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Ruxue Liu, Minghan Qiu, Xinxin Deng, Meng Zhang, Zhanhua Gao, Yayun Wang, Hanwei Mei, Mengting Zhai, Qiaonan Zhang, Jie Hao, Zhen Yang, and Huaqing Wang
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Pancreatic cancer ,Erianin ,AKT signaling pathway ,JNK/p38 signaling pathway ,Molecular mechanism ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Cytology ,QH573-671 - Abstract
Abstract Background Pancreatic cancer is a malignant tumor of the digestive tract with a high mortality rate. Erianin has antitumor activity, but the regulatory targets and mechanism of action in pancreatic cancer are unclear. The objective of this study was to evaluate the anti-pancreatic cancer activity of Erianin and explore its underlying mechanisms. Methods A network pharmacology approach was used to investigate the mechanism of action of Erianin in pancreatic cancer cells. Cell proliferation was analyzed using CCK8, colony-formation, and EdU proliferation assays. Cell migration was evaluated through wound healing and transwell assays, as well as determination of the protein expression levels of EMT markers and β-catenin. Apoptosis and the cell cycle were measured using flow cytometry and JC-1 staining, respectively. The protein expression levels of p-Rb, CyclinB1, P21, Cleaved-PARP, and Cleaved-Caspase3 were assessed using western blotting. RNA sequencing (RNA-seq) and bioinformatics analyses were performed to elucidate the mechanism underlying the action of Erianin in pancreatic cancer. Western blotting was used to examine the expression levels of key proteins in the AKT, JNK, and p38 MAPK signaling pathways. Molecular docking and CETSA were used to test hypotheses. The tumor-suppressive ability of Erianin in vivo was assessed using a tumor-bearing assay in nude mice. Results Network pharmacology revealed that Erianin inhibited pancreatic cancer through multiple pathways. Erianin significantly inhibited pancreatic cancer cell proliferation and migration while promoting intracellular ROS and inducing apoptosis. Mechanistically, Erianin inhibited pancreatic cancer cell proliferation by regulating the AKT/FOXO1 and ASK1/JNK/p38 MAPK signaling pathways. In vivo experiments showed that Erianin inhibited subcutaneous tumor growth and promoted tumor tissue apoptosis in nude mice. Conclusions The component-target-pathway network revealed that Erianin exerted anti-cancer effects through multiple components, targets, and pathways. Erianin inhibited the proliferation and migration of pancreatic cancer cells and induced apoptosis through the AKT/FOXO1 and ASK1/JNK/p38 MAPK signaling pathways. These results indicate that Erianin is a promising agent for pancreatic cancer treatment.
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- 2024
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25. Sex differences in mortality among patients with lupus nephritis
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Wang Xiang, Xi Xia, Yuewen Lu, Xinxin Zhang, Xiaolei Shi, Xiuzhi Jia, Ruihan Tang, and Wei Chen
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Sex differences ,Lupus nephritis ,Mortality ,Infection ,Prognosis ,Medicine - Abstract
Abstract Objective To evaluate the prognostic importance of sex in lupus nephritis (LN). Methods A retrospective cohort of 1048 biopsy-confirmed LN patients, diagnosed between January 1, 1996, and December 31, 2018, was analyzed. Demographics, clinical characteristics, laboratory findings, and renal pathology were assessed. The primary outcome was mortality, and the secondary outcomes included doubling of serum creatinine and end-stage renal disease (ESRD). Sex-associated risks were evaluated using Cox regression models. Results Among the1048 patients, 178 (17%) were male and 870 (83%) were female. Male patients exhibited more aggressive features: higher blood pressure, earlier disease onset, and elevated levels of serum creatinine (Scr), uric acid, blood urea nitrogen. Intriguingly, male patients also displayed more severe histopathological alterations, such as more total crescents, cellular crescents formations, higher level of glomerular leukocyte infiltration and Activity Index (AI), even when overall renal pathology was comparable between sexes. During a median follow-up of 112 months, mortality was registered in 141 patients (15.3%). Mortality rates were conspicuously higher in males (24.2% males vs. 13.4% females, p = 0.0029). Secondary outcomes did not show significant sex differences. Cox regression analysis highlighted male, age of renal biopsy, eGFR, and Chronicity Index (CI) as independent risk factors for survival in LN patients. Notably, infections emerged as the leading cause of mortality among LN patients, with a significant higher rate in male patients. Conclusion In our cohort with LN, there was a higher rate of all-cause mortality and proportion of infection-related death in male. Recognizing and further exploring these sex disparities is crucial for optimized LN patients care. Graphical Abstract
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- 2024
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26. Important fish diversity maintenance status of the tributaries in a hotspot fish conservation area in the upper Yangtze River revealed by eDNA metabarcoding
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Yanjun Shen, Xinxin Zhou, Yufeng Zhang, Jiaming Zhang, Qinghua Li, Qiliang Chen, Zhihao Liu, Yingwen Li, Ruli Cheng, and Yang Luo
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Environmental DNA metabarcoding ,Fish community ,Temporal and spatial distribution ,The upper Yangtze River ,Medicine ,Science - Abstract
Abstract This study employed Environmental DNA (eDNA) barcoding technology to delve into the influence of the tributaries and mainstem on fish diversity and spatiotemporal distribution in a hotspot fish conservation area in the upper Yangtze River. A total of 123 fish species were detected, belonging to 7 orders, 19 families, and 77 genera. The composition of fish species in tributaries is similar to that in mainstem, with higher fish community diversity in tributaries during the spring and summer. Exploration of fish ecotypes revealed significant differences between mainstem and tributaries. The fish community is mainly influenced by key environmental factors such as water temperature, dissolved oxygen, electrical conductivity, and ammonia nitrogen, with a higher impact of these factors on tributaries than on mainstem. In conclusion, while tributaries and mainstem in the Jiangjin section exhibit similarities in fish community composition, there are notable differences in community structure and diversity. Therefore, the protection of not only mainstem but also tributaries and their associated fish habitats is crucial for promoting the overall health and sustainability.
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- 2024
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27. Association of hyperactivated transposon expression with exacerbated immune activation in systemic lupus erythematosus
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Frank Qingyun Wang, Xiao Dang, Huidong Su, Yao Lei, Chun Hing She, Caicai Zhang, Xinxin Chen, Xingtian Yang, Jing Yang, Hong Feng, and Wanling Yang
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Systemic lupus erythematosus ,Interferon ,Nucleic acid sensor ,Transposon expression ,Genetics ,QH426-470 - Abstract
Abstract Background Systemic Lupus Erythematosus (SLE) is a complex autoimmune disorder, and transposable elements (TEs) have been hypothesized to play a significant role in its development. However, limited research has explored this connection. Our study aimed to examine the relationship between TE expression and SLE pathogenesis. Methods We analyzed whole blood RNA-seq datasets from 198 SLE patients and 84 healthy controls. The REdiscoverTE pipeline was employed to quantify TE and other gene expressions, identifying differentially expressed TEs. A TE score was calculated to measure overall TE expression for each sample. Gene ontology and gene set enrichment analyses were conducted to explore the functional implications of TE upregulation. Independent datasets were utilized to replicate the results and investigate cell type-specific TE expression. Results Our analysis identified two distinct patient groups: one with high TE expression and another with TE expression comparable to controls. Patients with high TE expression exhibited upregulation of pathways involving nucleic acid sensors, and TE expression was strongly correlated with interferon (IFN) signatures. Furthermore, these patients displayed deregulated cell composition, including increased neutrophils and decreased regulatory T cells. Neutrophils were suggested as the primary source of TE expression, contributing to IFN production. Conclusions Our findings suggest that TE expression may serve as a crucial mediator in maintaining the activation of interferon pathways, acting as an endogenous source of nucleic acid stimulators in SLE patients.
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- 2024
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28. From ROS scavenging to boosted osseointegration: cerium-containing mesoporous bioactive glass nanoparticles functionalized implants in diabetes
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Xue Jiang, Jianxu Wei, Xinxin Ding, Kai Zheng, Tian Zhou, Junyu Shi, Hongchang Lai, Shujiao Qian, and Xiaomeng Zhang
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Diabetes mellitus ,Reactive oxygen species ,Cerium ,Antioxidant ,Osseointegration ,Biotechnology ,TP248.13-248.65 ,Medical technology ,R855-855.5 - Abstract
Abstract Excessive production of reactive oxygen species (ROS) around titanium implants under diabetic conditions causes persistent inflammation, leading to poor osseointegration and even implant failure. Surface modification is an effective way to promote ROS clearance, alleviate inflammation, and stimulate bone formation. In this study, a multifunctional coating is fabricated by introducing cerium (Ce)-containing mesoporous bioactive glass nanoparticles (Ce-MBGNs) onto the titanium surface via an electrophoretic deposition method. The incorporation of Ce-MBGNs remarkably improves surface hydrophilicity by increasing the surface areas. The bioactive ions are appropriately released, thereby promoting mesenchymal stem cell proliferation and differentiation under diabetic conditions. The conversion between Ce(III) and Ce(IV) endows Ce-MBGNs coating with antioxidative nanoenzymes properties to scavenge diabetes-induced ROS, resulting in macrophage polarization towards the anti-inflammatory phenotype. The therapeutic effect of Ce-MBGNs-modified titanium implants is also verified in diabetic rats by inhibiting inflammatory responses and accelerating early osseointegration. Taken together, the findings reveal that the ROS-scavenging and immunomodulation activity of the Ce-MBGNs coating contributes to enhanced osseointegration, and provides a novel implant surface for diabetic patients.
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- 2024
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29. Layer by layer self-assembled hyaluronic acid nanoarmor for the treatment of ulcerative colitis
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Xinxin Zhao, Yuchen Zhang, Pengchong Wang, Kailai Liu, Yunhe Zheng, Jinpeng Wen, Ke Wang, and Xiaopeng Wen
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Bovine serum albumin ,Epigallocatechin gallate ,Tannic acid ,Armored nanotherapy ,Ulcerative colitis ,Biotechnology ,TP248.13-248.65 ,Medical technology ,R855-855.5 - Abstract
Abstract Natural compound-based treatments provide innovative ways for ulcerative colitis therapy. However, poor targeting and rapid degradation curtail its application, which needs to be addressed. Inspired by biomacromolecule-based materials, we have developed an orally administrated nanoparticle (GBP@HA NPs) using bovine serum albumin as a carrier for polyphenol delivery. The system synergizes galactosylated bovine serum albumin with two polyphenols, epigallocatechin gallate and tannic acid, which is then encased in “nanoarmor” of ε-Polylysine and hyaluronic acid to boost its stability and targeting. Remarkably, the nanoarmor demonstrated profound therapeutic effects in both acute and chronic mouse models of ulcerative colitis, mitigating disease symptoms via multiple mechanisms, regulating inflammation related factors and exerting a modulatory impact on gut microbiota. Further mechanistic investigations indicate that GBP@HA NPs may act through several pathways, including modulation of Keap1-Nrf2 and NF-κB signaling, as well as Caspase-1-dependent pyroptosis. Consequently, this novel armored nanotherapy promotes the way for enhanced polyphenol utilization in ulcerative colitis treatment research.
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- 2024
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30. Zhi-Kang-Yin formula attenuates high-fat diet-induced metabolic disorders through modulating gut microbiota-bile acids axis in mice
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Yifan Li, Hao Wang, Xiaofang He, Weize Zhu, Yiyang Bao, Xinxin Gao, Wenjin Huang, Xinyu Ge, Wenjing Wei, Huan Zhang, Lili Sheng, Tao Zhang, and Houkai Li
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Zhi-Kang-Yin ,Metabolic disorder ,Bile acids ,Gut microbiota ,Bile salt hydrolase ,Other systems of medicine ,RZ201-999 - Abstract
Abstract Background Metabolic disorders have become one of the global medical problems. Due to the complexity of its pathogenesis, there is still no effective treatment. Bile acids (BAs) and gut microbiota (GM) have been proved to be closely related to host metabolism, which could be important targets for metabolic disorders. Zhi-Kang-Yin (ZKY) is a traditional Chinese medicine (TCM) formula developed by the research team according to theory of TCM and has been shown to improve metabolism in clinic. However, the underlying mechanisms are unclear. Aim of the study This study aimed to investigate the potential mechanisms of the beneficial effect of ZKY on metabolism. Methods High-fat diet (HFD)-fed mice were treated with and without ZKY. The glucose and lipid metabolism-related indexes were measured. BA profile, GM composition and hepatic transcriptome were then investigated to analyze the changes of BAs, GM, and hepatic gene expression. Moreover, the relationship between GM and BAs was identified with functional gene quantification and ex vivo fermentation experiment. Results ZKY reduced weight gain and lipid levels in both liver and serum, attenuated hepatic steatosis and improved glucose tolerance in HFD-fed mice. BA profile detection showed that ZKY changed the composition of BAs and increased the proportion of unconjugated BAs and non-12-OH BAs. Hepatic transcriptomic analysis revealed fatty acid metabolism and BA biosynthesis related pathways were regulated. In addition, ZKY significantly changed the structure of GM and upregulated the gene copy number of bacterial bile salt hydrolase. Meanwhile, ZKY directly promoted the growth of Bifidobacterium, which is a well-known bile salt hydrolase-producing genus. The ex vivo co-culture experiment with gut microbiota and BAs demonstrated that the changes of BAs profile in ZKY group were mediated by ZKY-shifted GM, which led to increased expression of genes associated with fatty acid degradation in the liver. Conclusion Our study indicated that the effect of ZKY on improving metabolism is associated with the modulation of GM-BAs axis, especially, by upregulating the abundance of bile salt hydrolase-expression bacteria and increasing the levels of unconjugated BAs. This study indicates that GM-BAs axis might be an important pathway for improving metabolic disorders by ZKY.
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- 2024
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31. Research on planting planning of Glycyrrhiza uralensis in Naiman Banner based on MaxEnt model and remote sensing technology
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Zeyuan Zhao, Xinxin Wei, Jingxia Guo, Yaqiong Bi, Tingting Shi, Feibiao Shan, Chunhong Zhang, and Minhui Li
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Glycyrrhiza Uralensis Fisch. ,Ecology suitability ,MaxEnt model ,Remote sensing ,Random forest ,Information identification ,Medicine ,Science - Abstract
Abstract Benefits of Glycyrrhiza uralensis include removing heat, detoxifying, and moistening the lungs, easing coughs, refueling the spleen, and balancing medications. In addition to providing theoretical guidance for the development of the G. uralensis industry and rural revitalization plan, it is anticipated that this paper will also provide basic data for the formulation of production layout of the G. uralensis industry at the county level, the control of cultivation industry direction, the establishment of high-quality G. uralensis cultivation technology system. The Maximum Entropy (MaxEnt) model was used to simulate the potential distribution of G. uralensis, a Chinese medicine resource, in Naiman Banner. By conducting a field inquiry and a broad assessment of the available Chinese medicine resources, the distribution information was acquired. The random forest technique was used to classify G. uralensis. The phenological cycle and development mode of vegetation, which exhibits diverse temporal traits and aids in identification, were elucidated through long-term series analysis. The random forest classification algorithm based on multiple features showed high accuracy in remote sensing (RS) recognition of G. uralensis. Comparative analysis of the MaxEnt and RS results showed that the planting area of G. uralensis was smaller than that of its potential distribution. The expansion to high-suitability areas planting should be prioritized. Based on the dual analysis of regional and remote sensing, it not only proved the great potential of using geographic information to predict the distribution of G. uralensis, but also verified the great potential of extracting the distribution of G. uralensis from GF-6 images. These results will guide the planting and development of G. uralensis in Naiman Banner and a scientific basis for the development of G. uralensis economy, conducive to optimizing the ecological environment and promoting rural revitalization programs.
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- 2024
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32. The outcome of advanced and recurrent cervical cancer patients treated with first-line platinum and paclitaxel with or without indication for immune checkpoint inhibitors: the comparative study
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Lan Feng, Qun Shi, Shujuan Wang, Ye Zhao, Haiyan Wu, Lei Wei, Qing Hao, Zhaojun Cui, Lin Wang, Jing Zhang, Dan Zhang, Xinxin Zhan, and Jingwen Jiang
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Immune checkpoint inhibitors ,Advanced and recurrent cervical cancer ,Treatment response ,Survival ,Safety ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Objective Immune checkpoint inhibitor (ICI) therapy activates the immune system to recognize and eliminate cancer cells that have escaped surveillance. This study aimed to compare the treatment outcome of advanced and recurrent cervical cancer patients treated with first-line platinum and paclitaxel with or without ICI. Methods Data from 69 advanced and recurrent cervical cancer patients treated with first-line ICI plus platinum and paclitaxel (N = 33) or first-line platinum and paclitaxel (N = 36) were reviewed between March 2020 and January 2023 in this retrospective study. Patients chose treatment based on the actual disease condition, patient willingness, and medical advice. Additionally, objective response rate (ORR), disease control rate (DCR), progression-free survival (PFS), and overall survival (OS) were calculated, and adverse events were gained. Results There was no difference in baseline data between patients receiving the two different treatments (all P > 0.05). Complete response rate (18.2% vs. 8.3%; P = 0.294), ORR (48.5% vs. 30.6%; P = 0.127), and DCR (81.8% vs. 72.2%; P = 0.345) tended to ascend in patients treated with ICI plus platinum and paclitaxel compared to those treated with platinum and paclitaxel, although there was no statistical significance. In patients treated with ICI plus platinum and paclitaxel, the median PFS was 10.3 months and the median OS was not reached. Meanwhile, the median PFS and OS were 7.7 and 16.9 months in patients treated with platinum and paclitaxel. PFS (P = 0.036) and OS (P = 0.033) were increased in patients treated with ICI plus platinum and paclitaxel versus those treated with platinum and paclitaxel, which was verified by multivariate Cox regression analyses (both P 0.05). Conclusion First-line ICI plus platinum and paclitaxel yields better treatment responses, longer survival, and non-differential adverse events versus first-line platinum and paclitaxel in advanced and recurrent cervical cancer patients.
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- 2024
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33. Intermetallics triggering pyroptosis and disulfidptosis in cancer cells promote anti-tumor immunity
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Yanlin Zhu, Xinxin Wang, Lili Feng, Ruoxi Zhao, Can Yu, Yuanli Liu, Ying Xie, Bin Liu, Yang Zhou, and Piaoping Yang
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Science - Abstract
Abstract Pyroptosis, an immunogenic programmed cell death, could efficiently activate tumor immunogenicity and reprogram immunosuppressive microenvironment for boosting cancer immunotherapy. However, the overexpression of SLC7A11 promotes glutathione biosynthesis for maintaining redox balance and countering pyroptosis. Herein, we develop intermetallics modified with glucose oxidase (GOx) and soybean phospholipid (SP) as pyroptosis promoters (Pd2Sn@GOx-SP), that not only induce pyroptosis by cascade biocatalysis for remodeling tumor microenvironment and facilitating tumor cell immunogenicity, but also trigger disulfidptosis mediated by cystine accumulation to further promote tumor pyroptosis in female mice. Experiments and density functional theory calculations show that Pd2Sn nanorods with an intermediate size exhibit stronger photothermal and enzyme catalytic activity compared with the other three morphologies investigated. The peroxidase-mimic and oxidase-mimic activities of Pd2Sn cause potent reactive oxygen species (ROS) storms for triggering pyroptosis, which could be self-reinforced by photothermal effect, hydrogen peroxide supply accompanied by glycometabolism, and oxygen production from catalase-mimic activity of Pd2Sn. Moreover, the increase of NADP+/NADPH ratio induced by glucose starvation could pose excessive cystine accumulation and inhibit glutathione synthesis, which could cause disulfidptosis and further augment ROS-mediated pyroptosis, respectively. This two-pronged treatment strategy could represent an alternative therapeutic approach to expand anti-tumor immunotherapy.
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- 2024
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34. 3,600 years of human adaptation to drought intensification on the southern Tibetan Plateau
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Hao Li, Deke Xu, Chang Li, Anning Cui, Yajie Dong, Xinxin Zuo, Can Wang, Naiqin Wu, and Houyuan Lu
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Geology ,QE1-996.5 ,Environmental sciences ,GE1-350 - Abstract
Abstract The development of adaptive survival strategies is crucial for human occupation of the high-altitude areas of the Tibetan Plateau (TP). However, the history of this adaptation and its driving mechanisms are poorly understood. We used records of pollen, coprophilous fungal spores, and charcoal from a well-dated, high-resolution lake sediment core from the Southern Tibetan Plateau (STP) to investigate the history of high-altitude survival strategies, including arable agriculture and pastoralism, spanning the past 3600 years. The results revealed that survival strategies were dominated by arable agriculture, supplemented by pastoralism, from ~3600 to 1800 cal yr BP. However, after 1800 cal yr BP, this strategy shifted to low-level arable agriculture with intensified pastoralism. Comparison of our findings with regional paleoclimatic and archaeological records revealed that this transformation was an adaptive response to drought intensification. This adaptive resilience was a key aspect of human occupation of the high-altitude regions of the TP during the late Holocene.
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- 2024
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35. Salivary microbiota composition before and after use of proton pump inhibitors in patients with laryngopharyngeal reflux: a self-control study
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Xiaohuan Cui, Longlong Yin, Yanping Zhang, Xingwang Jiang, Lina Li, and Xinxin Bi
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Laryngopharyngeal reflux ,Proton pump inhibitors (PPIs) ,Saliva ,Microbiome ,Dentistry ,RK1-715 - Abstract
Abstract Background Issues associated with proton pump inhibitor (PPI) usage have been documented. PPIs affect the gastrointestinal microbiome, as well as the saliva microbiota of healthy individuals. However, the alterations in the saliva microbiota of laryngopharyngeal reflux (LPR) patients remain unclear. This study aims to examine the composition of saliva microbiota in LPR patients before and after PPI usage through a self-controlled study. Methods Thirty-two adult LPR patients participated in the study. Saliva samples were collected before and after an 8-week regimen of twice-daily administration of 20-mg esomeprazole. The impact of PPI administration on bacterial communities was assessed using 16 S rRNA gene sequencing. The functional and metabolic changes in saliva microbial communities after PPI usage were analyzed using PICRUSt2 based on our 16 S rRNA gene sequencing results. Results The alpha diversity within the salivary microbiota, as measured by the PD-whole-tree index, exhibited a significant difference between samples collected before and after PPI application (P = 0.038). Additionally, PCoA analysis of unweighted UniFrac distances (beta diversity) revealed distinct separation of saliva sample microbiota structures before and after PPI application in LPR patients, with statistical significance (Adonis test, R2 = 0.063, P
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- 2024
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36. A chromosome-level genome assembly of Cape hare (Lepus capensis)
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Xianggui Dong, Yu Liu, Yuan Chen, Xinxin Ping, Zhanjun Ren, and Yuanyuan Zhang
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Science - Abstract
Abstract The Cape hare (Lepus capensis) is among the most widely distributed hare species globally, inhabiting extensive regions across Africa, the Middle East, and Central Asia. However, evolutionary and genetic research on L. capensis was seriously impeded by the absence of a reference genome. Here, we assembled and constructed a chromosome-level genome of L. capensis (with scaffolds anchored to 25 chromosomes and a total assembled length of 2.9 Gb, achieving a contig N50 length of 124.44 Mb) using PacBio HiFi sequencing and Hi-C assembly technology. Evaluation using BUSCO indicated the genome assembly to be 98.2% complete. The de novo prediction revealed that repetitive sequences constitute 46.13% of the entire genome, and long interspersed nuclear elements (LINEs) constituted the largest portion. We annotated a total of 13, 868 protein-coding genes using transcriptomes from two tissues (muscle and skin). This high-quality reference genome serves as a valuable genomic resource for advancing genetic studies in this species.
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- 2024
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37. Transcriptomic and metabolomic analysis of poplar response to feeding by Hyphantria cunea
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Hanxi Li, Jiajia Shen, Yutong Ding, Yuxi Li, Jiayu Du, Tingbo Jiang, Xiangbo Kong, Rui Han, Xinxin Zhang, and Xiyang Zhao
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populus ,Hyphantria cunea ,Transcriptomics ,Metabolomics ,Botany ,QK1-989 - Abstract
Abstract Populus cathayana × canadansis ‘Xinlin 1’ (‘P.‘xin lin 1’) with the characteristics of rapid growth and high yield, is frequently attacked by herbivorous insects. However, little is known about how it defenses against Hyphantria cunea (H. cunea) at molecular and biochemical levels. Differences in the transcriptome and metabolome were analyzed after ‘P. ‘xin lin 1’ leaves were fed to H. cunea for 0h, 2h, 4h, 8h, 16h and 24h. In the five comparison groups including 2h vs. CK, 4h vs. CK, 8h vs. CK, 16h vs. CK, and 24h vs. CK, a total of 8925 genes and 842 metabolites were differentially expressed. A total of 825 transcription factors (TFs) were identified, which encoded 56 TF families. The results showed that the top four families with the highest number of TFs were AP2/ERF, MYB, C2C2, bHLH. Analyses of leaves which were fed to H. cunea showed that the differentially expressed genes (DEGs) and differentially accumulated metabolites (DAMs) were significantly enriched in plant hormone signal transduction pathway, MAPK signaling pathway, flavonoid, flavone and flavonol and anthocyanin biosynthesis pathway. Additionally, there were a number of genes significantly up-regulated in MAPK signaling pathway. Some compounds involved in plant hormone signal transduction and flavonoid/flavone and flavonol/ anthocyanin pathways such as jasmonic acid (JA), jasmonoyl-L-Isoleucine (JA-Ile), kaempferol and cyanidin-3-O-glucoside were induced in infested ‘P.‘xin lin 1’. This study provides a new understanding for exploring the dynamic response mechanism of poplar to the infestation of H. cunea.
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- 2024
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38. Sleeve gastrectomy ameliorates renal injury in obesity-combined hyperuricemic nephropathy mice by modulating the AMPK/Nrf2/ABCG2 pathway
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Ke Song, Xiangxin Kong, Zhongyang Zhang, Yin Xian, Ming He, Yuan Zhang, Xinxin Liao, Ziyan Huang, Aijia Kang, Dingqi Xiao, and Yixing Ren
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Sleeve gastrectomy ,Hyperuricemic nephropathy ,AMPK ,Nrf2 ,ABCG2 ,Medicine ,Science - Abstract
Abstract Hyperuricemic nephropathy (HN) is renal injury caused by hyperuricemia (HUA). While sleeve gastrectomy (SG) has shown promise in improving renal injury in patients with obesity-related HN, the mechanisms are not fully understood. This study induced an obesity-combined HN model in male ob/ob mice and measured serum uric acid (SUA), creatinine, and other biochemical indicators 6 weeks post-surgery. Renal histological changes were evaluated through staining techniques, and the study also assessed renal adenosine monophosphate-activated protein kinase (AMPK) and nuclear factor erythroid 2-related factor 2 (Nrf2) phosphorylation levels and urate transporter ABCG2 expression. In vitro experiments involved Nrf2 knockdown in AMPK-activated HK-2 cells and ChIP to confirm Nrf2 binding to the ABCG2 promoter. Results showed that SG reduced SUA levels, serum creatinine, and blood urea nitrogen, increased p-AMPK, p-Nrf2 protein, and ABCG2 expression, and alleviated renal fibrosis and inflammation. In vitro, Nrf2 knockdown down-regulated ABCG2 expression, and ChIP confirmed Nrf2’s role in ABCG2 transcription. The study suggests that SG may improve renal injury in HN mice by modulating the AMPK/Nrf2 pathway and upregulating ABCG2 transcription.
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- 2024
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39. Activation of the AMPK/Nrf2 pathway ameliorates LPS-induced acute lung injury by inhibiting oxidative stress and reducing inflammation
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Haoxuan Li, Yiting Nie, Hongyu Hui, Xinxin Jiang, Yuanyuan Xie, and Cong Fu
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Acute lung injury ,AMPK/Nrf2 ,Oxidative stress ,ALI ,Surgery ,RD1-811 ,Anesthesiology ,RD78.3-87.3 - Abstract
Abstract Background Numerous diseases-related acute lung injury (ALI) contributed to high mortality. Currently, the therapeutic effect of ALI was still poor. The detailed mechanism of ALI remained elusive and this study aimed to elucidate the mechanism of ALI. Method This study was performed to expose the molecular mechanisms of AMPK/Nrf2 pathway regulating oxidative stress in LPS-induced AMI mice. The mouse ALI model was established via intraperitoneal injection of LPS, then the lung tissue and blood samples were obtained, followed by injection with Dimethyl fumarate (DMF). Finally, Western blot, HE staining, injury score, lung wet/dry ratio, reactive oxygen species (ROS) and ELISA were used to elucidate the mechanism of AMPK/Nrf2 pathway in LPS -induced acute lung injury by mediating oxidative stress. Results The lung tissue injury score was evaluated, showing higher scores in the model group compared to the AMPK activator and control groups. DCFH-DA indicated that LPS increased ROS production, while AMPK activator DMF reduced it, with the model group exhibiting higher ROS levels than the control and AMPK activator groups. The lung wet/dry ratio was also higher in the model group. Western blot analysis revealed LPS reduced AMPK and Nrf2 protein levels, but DMF reversed this effect. ELISA results showed elevated IL-6 and IL-1β levels in the model group compared to the AMPK activator and control groups.Conclusion: Conclusion Activating the AMPK/Nrf2 pathway can improve LPS-induced acute lung injury by down-regulation of the oxidative stress and corresponding inflammatory factor level.
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- 2024
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40. Association between serum branched chain amino acids, mammalian target of rapamycin levels and the risk of gestational diabetes mellitus: a 1:1 matched case control study
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Lingling Cui, Zhiqian Li, Xinxin Liu, Zhonglei Li, Jiaxin Li, Yingying Guo, Huijun Zhou, Xiaoli Yang, Zhengya Zhang, Yuting Gao, Lina Ren, and Linlin Hua
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Branched chain amino acids ,Mammalian target of rapamycin ,Gestational diabetes mellitus ,Pregnancy ,Glucose tolerance ,Gynecology and obstetrics ,RG1-991 - Abstract
Abstract Background To investigate the association between serum branched chain amino acids (BCAAs), mammalian target of rapamycin (mTOR) levels and the risk of gestational diabetes mellitus (GDM) in pregnant women. Methods 1:1 matched case–control study was conducted including 66 GDM patients and 66 matched healthy pregnant women (± 3 years) in 2019, in China. Fasting bloods of pregnant women were collected in pregnancy at 24 ~ 28 weeks gestation. And the serum levels of valine (Val), leucine (Leu), isoleucine (Ile) and mTOR were determined. Conditional logistic regressions models were used to estimate the associations of BCAAs and mTOR concentrations with the risk of GDM. Results Concentrations of serum Val and mTOR in cases were significantly higher than that in controls (P
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- 2024
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41. Global epidemiology of liver cancer 2022: An emphasis on geographic disparities
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Qianru Li, Chao Ding, Maomao Cao, Fan Yang, Xinxin Yan, Siyi He, Mengdi Cao, Shaoli Zhang, Yi Teng, Nuopei Tan, Jiachen Wang, Changfa Xia, Wanqing Chen, and Jing Ni
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Medicine - Abstract
Abstract. Background:. Liver cancer remains the sixth most commonly diagnosed cancer and the third leading cause of cancer-related deaths worldwide, causing a heavy burden globally. An updated assessment of the global epidemiology of the liver cancer burden that addresses geographical disparities is necessary to better understand and promote healthcare delivery. Methods:. Data were extracted from the GLOBOCAN 2022 database, including the number, crude, and age-standardized rates of incidence and mortality at the global, country, continent, and human development index (HDI) regional levels. Age-standardized rates (incidence and mortality) per 100,000 person-years were adjusted based on the Segi-Doll World standard population. The mortality-to-incidence ratios (MIR) for each region and country were calculated. The HDI and gross national income (GNI) for 2022 were obtained, and a Pearson correlation analysis was conducted with the incidence, mortality, and MIR. Results:. In 2022, approximately 866,136 new liver cancer cases and 758,725 related deaths were recorded worldwide, with a global MIR of 0.86. Males had a disproportionately higher burden than females across all levels, and the highest burden was observed in the elderly population. Geographically, the regions with the highest incidence rates included Micronesia, Eastern Asia, and Northern Africa, and the regions with the highest mortality rates included Northern Africa, Southeastern Asia, Eastern Asia, and Micronesia. Notably, Mongolia had a strikingly high burden compared to other countries. The highest MIR was observed in North America and the lowest in Africa. Negative associations of HDI and GNI with liver cancer mortality and MIR were identified, irrespective of sex. Conclusions:. The current liver cancer burden underscores the presence of remarkable geographic heterogeneity, which is particularly evident across countries with varying HDI levels, highlighting the urgent need to prioritize health accessibility and availability to achieve health inequities.
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- 2024
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42. Modeling and Correction of Label Noise Uncertainty for SAR ATR
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Yue YU, Chen WANG, Jun SHI, Chongben TAO, Liang LI, Xinxin TANG, Liming ZHOU, Shunjun WEI, and Xiaoling ZHANG
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synthetic aperture radar (sar) ,label noise ,label noise correction ,label noise uncertainty modeling ,fuzzy clustering algorithm ,Electricity and magnetism ,QC501-766 - Abstract
The success of deep supervised learning in Synthetic Aperture Radar (SAR) Automatic Target Recognition (ATR) relies on a large number of labeled samples. However, label noise often exists in large-scale datasets, which highly influence network training. This study proposes loss curve fitting-based label noise uncertainty modeling and a noise uncertainty-based correction method. The loss curve is a discriminative feature to model label noise uncertainty using an unsupervised fuzzy clustering algorithm. Then, according to this uncertainty, the sample set is divided into different subsets: the noisy-label set, clean-label set, and fuzzy-label set, which are further used in training loss with different weights to correct label noise. Experiments on the Moving and Stationary Target Acquisition and Recognition (MSTAR) dataset prove that our method can deal with varying ratios of label noise during network training and correct label noise effectively. When the training dataset contains a small ratio of label noise (40%), the proposed method corrects 98.6% of these labels and trains the network with 98.7% classification accuracy. Even when the proportion of label noise is large (80%), the proposed method corrects 87.8% of label noise and trains the network with 82.3% classification accuracy.
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- 2024
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43. Cloning and Expression of Marine α-Glucosidase and Its Preparation of High Purity Panose
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Yiqun YU, Luzhou XUE, Hao NI, Lei JIANG, Xinxin KANG, Saikun PAN, and Shujun WANG
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α-glucosidase ,cloning and expression ,iso-malto-oligosaccharide ,trans glycoside ,panose ,Food processing and manufacture ,TP368-456 - Abstract
Panose is iso-malto-oligosaccharide contained α-1,6 glycosidic bonds, and α-glucosidase is the key enzyme to produce panose. In this study, the α-glucosidase gene in deep-sea hydrothermal vents thermophilic archaea Thermococcus siculi HJ21 was synthesized, and cloned into the vector pET29a. Then expressed in Escherichia coli BL21 and purified by His Trap HP column. The molecular weight of α-glucosidase was determined by SDS-PAGE. The enzymatic properties and transglycosylation were also investigated. The results showed that the gene of α-glucosidase was 729 bp and encoded 242 amino acids. The molecular weight of α-glucosidase was about 27.2 kDa. Its optimal temperature and pH were 40 ℃ and 6.0 respectively. When the receptor was fructose, and the ratio of fructose and maltose was 1:9, the highest yield of panose could reached 79.1% after 10 h reaction. The results provide a basis for producing high-purity panose by α-glucosidase from archaea.
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- 2024
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44. Trade unions and the wage gap between rural migrant and local urban workers in China
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Xinxin Ma and Sho Komatsu
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J51 ,J53 ,J31 ,P21 ,P31 ,P41 ,Economic theory. Demography ,HB1-3840 ,Economic growth, development, planning ,HD72-88 - Abstract
This study estimates union wage premiums and analyzes the influence of trade unions on the wage gap between rural migrants and local urban workers in China by employing the Blinder–Oaxaca decomposition method based on national longitudinal survey data from the China Family Panel Studies (2010–2018). The results indicate that the union wage premium among rural migrant workers is greater than that among local urban workers. The disparity in union density widens the wage gap, whereas the difference in union wage premiums narrows the wage gap between the two groups. Moreover, the contribution rate of the former is greater than that of the latter. These results suggest that expanding union coverage among rural migrant workers could effectively contribute to reducing the wage gap.
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- 2024
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45. Circ_001653 alleviates sepsis associated-acute kidney injury by recruiting BUD13 to regulate KEAP1/NRF2/HO-1 signaling pathway
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Xinxin Li, Wei Zhou, Jianjun Chen, Liangliang Zhou, Yingbing Li, Xufeng Wu, and Xia Peng
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Sepsis ,Acute kidney injury ,Circ_001653 ,KEAP1/Nrf2 signaling pathway ,Mechanism ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Abstract Background The kidney is exceptionally vulnerable during sepsis, often resulting in sepsis-associated acute kidney injury (SA-AKI), a condition that not only escalates morbidity but also significantly raises sepsis-related mortality rates. Circular RNA circ_001653 has been previously reported to be upregulated in the serum of SA-AKI patients, while the role and underlying mechanism of circ_001653 in SA-AKI remains unknown. In this study, we aimed to explore the functional role and the molecular mechanism of circ_001653 in the pathogenesis of SA-AKI. Methods LPS-stimulated HK-2 cells and ligation and perforation of cecum (CLP)-induced rats were used as in vitro and in vivo models of SA-AKI. The target gene expression levels were measured using qRT-PCR and western blot. Renal function (BUN, sCr, uNGAL, and uKIM-1), and renal pathological changes were detected in septic mice. TUNEL and EdU assays were conducted to measure apoptosis and proliferation rates in vitro. DCFH-DA staining was used to detect ROS levels in vitro and in vivo. Oxidative stress markers (SOD, GSH-Px, MDA, and SOD), and inflammation markers (IL-1β, IL-6, and TNF-α) were determined using commercial kits both in vitro and in vivo. Additionally, gain-and-loss-of-function assays and mechanistic experiments were conducted to explore the regulatory role of circ_001653 in SA-AKI pathogenesis. Results Data showed that circ_001653 expression was high in LPS-stimulated HK-2 cells and CLP-induced rat renal tissue and was mainly localized in the cytoplasm. Notably, circ_001653 silencing alleviated SA-AKI by reducing apoptosis and alleviating oxidative stress and inflammation in HK-2 cells and renal tissue of rats. Mechanistically, it was found that circ_001653 alleviated SA-AKI by recruiting BUD13 to activate the KEAP1/Nrf2/HO-1 signaling pathway. Conclusions To summarize, our study is the first to reveal elevated expression of circ_001653 in sepsis-associated AKI, and its downregulation effectively attenuates AKI by reducing apoptosis, inflammation, and oxidative stress. Mechanistically, circ_001653 exerts its effects by recruiting BUD13 to activate the KEAP1/Nrf2/HO-1 signaling pathway. These findings suggest circ_001653 as a potential therapeutic target for the drug development of sepsis-associated AKI.
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- 2024
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46. Efficacy of hepatic arterial infusion chemotherapy in patients with primary liver cancer with portal vein tumor thrombosis: a comparative analysis of different perfusion chemotherapeutic regimens
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Xinxin Tu, Wenfeng Zhang, Sipeng Li, Qi He, and Yue Li
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Transarterial chemoembolization ,Hepatic arterial infusion chemotherapy ,portal vein tumor thrombosis ,Primary liver cancer ,Medicine - Abstract
Abstract Background Portal vein tumor thrombosis (PVTT) commonly occurs in patients with primary liver cancer (PLC). Transarterial chemoembolization (TACE) is a treatment for patients with PLC and PVTT. Some studies have shown that combining TACE therapy with hepatic arterial infusion chemotherapy (HAIC) might improve the survival rate of PLC patients with PVTT. However, few studies have compared the different regimens of PLC with PVTT. We aimed to compare the differences between the oxaliplatin + raltetrexed regimen and FOLFOX regimen. Methods We divided the 248 patients into two groups. There were 60 patients in the oxaliplatin + ratitetrexed group and 74 patients in the FOLFOX group. The primary endpoints were OS and PFS. The secondary endpoints were ORR and adverse events. We used SPSS software, the Kaplan–Meier method, the t test, and the rank sum test to compare the differences between the two groups. Results The median OS was 10.82 months in the oxaliplatin + raltitrexed group and 8.67 months in the FOLFOX group. The median PFS time was greater in the oxaliplatin + raltitrexed group (10.0 months) than that in the FOLFOX group (7.1 months). The ORR was greater in the oxaliplatin + raltitrexed group than that in the FOLFOX group (18.3% vs. 13.5%; P = 0.445). The DCR in the oxaliplatin + raltitrexed group was higher than that in the FOLFOX group (70.0% vs. 64.8%; P = 0.529). However, in the subgroup analysis, the difference between them was more significant in the type II PVTT subgroup. The OS was 12.08 months in the oxaliplatin + raltitrexed group and 7.26 months in the FOLFOX group (P = 0.008). The PFS was 11.68 months in the oxaliplatin + raltitrexed group and 6.26 months in the FOLFOX group (P = 0.014). In the right branch of type II PVTT, the OS was 13.54 months in the oxaliplatin + raltitrexed group and 6.89 months in the FOLFOX group (P = 0.015), and the PFS was 13.35 months in the oxaliplatin + raltitrexed group and 6.27 months in the FOLFOX group (P = 0.030). The incidence of adverse reactions was similar between the two groups. Conclusions Compared with the FOLFOX regimen, the oxaliplatin + raltitrexed chemoembolization regimen had longer OS, PFS time and ORR and DCR and it was safe and tolerable.
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- 2024
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47. A dynamic regulome of shoot-apical-meristem-related homeobox transcription factors modulates plant architecture in maize
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Zi Luo, Leiming Wu, Xinxin Miao, Shuang Zhang, Ningning Wei, Shiya Zhao, Xiaoyang Shang, Hongyan Hu, Jiquan Xue, Tifu Zhang, Fang Yang, Shutu Xu, and Lin Li
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Homeobox family ,Transcription factor ,Binding sites ,tsCUT&Tag ,Plant height ,Shoot architecture ,Biology (General) ,QH301-705.5 ,Genetics ,QH426-470 - Abstract
Abstract Background The shoot apical meristem (SAM), from which all above-ground tissues of plants are derived, is critical to plant morphology and development. In maize (Zea mays), loss-of-function mutant studies have identified several SAM-related genes, most encoding homeobox transcription factors (TFs), located upstream of hierarchical networks of hundreds of genes. Results Here, we collect 46 transcriptome and 16 translatome datasets across 62 different tissues or stages from the maize inbred line B73. We construct a dynamic regulome for 27 members of three SAM-related homeobox subfamilies (KNOX, WOX, and ZF-HD) through machine-learning models for the detection of TF targets across different tissues and stages by combining tsCUT&Tag, ATAC-seq, and expression profiling. This dynamic regulome demonstrates the distinct binding specificity and co-factors for these homeobox subfamilies, indicative of functional divergence between and within them. Furthermore, we assemble a SAM dynamic regulome, illustrating potential functional mechanisms associated with plant architecture. Lastly, we generate a wox13a mutant that provides evidence that WOX13A directly regulates Gn1 expression to modulate plant height, validating the regulome of SAM-related homeobox genes. Conclusions The SAM-related homeobox transcription-factor regulome presents an unprecedented opportunity to dissect the molecular mechanisms governing SAM maintenance and development, thereby advancing our understanding of maize growth and shoot architecture.
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- 2024
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48. Correlation between learning styles and attitudes toward interprofessional education among medical students: a cross-sectional study
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Chengrui Zhang, Xinxin Wang, Ying Xing, Wei Luan, and Tao Jin
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Attitude ,Collaborative learning ,Interprofessional learning ,Learning styles ,Medical Education Research ,RIPLS ,Special aspects of education ,LC8-6691 ,Medicine - Abstract
Abstract Background Interprofessional teamwork improves patient care quality, safety, and health outcomes. Interprofessional education (IPE) is crucial in today’s medical education to prepare students for the workforce as integral members of a collaborative team. The diversity of IPE learners indicates the importance of exploring the relationship between learning styles and attitudes toward IPE. The purpose of this study was to investigate the relationship between learning styles and attitudes toward IPE. Methods A cross-sectional study was conducted between August 2023 and September 2023 in 49 colleges located in the south-eastern region of China. A convenience sampling approach was employed, selecting 500 students majoring in Clinical Medicine and Nursing. The students completed an online questionnaire, which included sociodemographic characteristics, educational characteristics, interprofessional educational characteristics, learning styles, and the readiness for interprofessional learning scale, and Kolb’s learning style inventory. Descriptive statistics, Spearman’s correlation, and multiple linear regression analysis were used to analyze the data. Results The most learners are diverger (93.2%), followed by assimilator (3.4%), accommodator (2.6%), and Converger (0.8%). The total score on the RIPLS was 69.70 (7.42), ranging from 48 to 88. A statistical relationship could be established between learning styles and attitudes toward IPE. Conclusion Abstract conceptualization and active experimentation learning modes and convergers were closely linked with positive attitudes toward IPE. Gender, age, and study stress can affect attitudes toward IPE. This study highlights the need for medical education curricula to integrate innovative teaching methods such as PBL, role-playing, scenario simulation and clinical early exposure to strengthen professional identity, and improve abilities related to interprofessional learning.
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- 2024
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49. Vector competence of Culex quinquefasciatus for Tembusu virus and viral factors for virus transmission by mosquitoes
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Yibin Tang, Yu He, Xiaoli Wang, Zhen Wu, Senyan Du, Mingshu Wang, Renyong Jia, Dekang Zhu, Mafeng Liu, Xinxin Zhao, Qiao Yang, Ying Wu, Shaqiu Zhang, Juan Huang, Xumin Ou, Di Sun, Anchun Cheng, and Shun Chen
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Tembusu virus ,Culex quinquefasciatus ,vector competence ,mosquito transmission ,vertical transmission ,venereal transmission ,Veterinary medicine ,SF600-1100 - Abstract
Abstract The ongoing epidemic of flaviviruses worldwide has underscored the importance of studying flavivirus vector competence, considering their close association with mosquito vectors. Tembusu virus is an avian-related mosquito-borne flavivirus that has been an epidemic in China and Southeast Asia since 2010. However, the reason for the outbreak of Tembusu virus in 2010 remains unclear, and it is unknown whether changes in vector transmission played an essential role in this process. To address these questions, we conducted a study using Culex quinquefasciatus as a model for Tembusu virus infection, employing both oral infection and microinjection methods. Our findings confirmed that both vertical and venereal transmission collectively contribute to the cycle of Tembusu virus within the mosquito population, with persistent infections observed. Importantly, our data revealed that the prototypical Tembusu virus MM_1775 strain exhibited significantly greater infectivity and transmission rates in mosquitoes than did the duck Tembusu virus (CQW1 strain). Furthermore, we revealed that the viral E protein and 3′ untranslated region are key elements responsible for these differences. In conclusion, our study sheds light on mosquito transmission of Tembusu virus and provides valuable insights into the factors influencing its infectivity and transmission rates. These findings contribute to a better understanding of Tembusu virus epidemiology and can potentially aid in the development of strategies to control its spread.
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- 2024
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50. Duck hepatitis A virus utilizes PCBP2 to facilitate viral translation and replication
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Chenxia Xu, Yurui Jiang, Mingshu Wang, Anchun Cheng, Wei Zhang, Xumin Ou, Di Sun, Qiao Yang, Ying Wu, Bin Tian, Yu He, Zhen Wu, Shaqiu Zhang, Xinxin Zhao, Juan Huang, Dekang Zhu, Shun Chen, Mafeng Liu, and Renyong Jia
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DHAV-1 ,PCBP2 ,IRES ,3Dpol ,translation ,replication ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Duck hepatitis A virus type 1 (DHAV-1) is an important member of the Picornaviridae family that causes highly fatal hepatitis in ducklings. Since picornaviruses have small genomes with limited coding capacity, they must utilize host proteins for viral cap-independent translation and RNA replication. Here, we report the role of duck poly(rC)-binding protein 2 (PCBP2) in regulating the replication and translation of DHAV-1. During DHAV-1 infection, PCBP2 expression was upregulated. A biotinylated RNA pull-down assay revealed that PCBP2 positively regulates DHAV-1 translation through specific interactions with structural domains II and III of the DHAV-1 internal ribosome entry site (IRES). Further studies revealed that PCBP2 promotes DHAV-1 replication via an interaction of its KH1 domain (aa 1–92) with DHAV-1 3Dpol. Thus, our studies demonstrated the specific role of PCBP2 in regulating DHAV-1 translation and replication, revealing a novel mechanism by which host‒virus interactions regulate viral translation and replication. These findings contribute to further understanding of the pathogenesis of picornavirus infections.
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- 2024
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