232 results on '"Xiaozhen Yang"'
Search Results
2. Planktothricoides-dominated blooms drive abnormal lipid metabolism and pathogens enrichment in the intestine of Eriocheir sinensis
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Tong Li, Yongxu Cheng, Zhiyuan Yao, Yunfei Sun, Xiaozhen Yang, Wenwen Xiao, Demin Zhang, and Huajun Zhang
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Eriocheir sinensis ,Planktothricoides bloom ,Microbial community ,Potential pathogens ,Lipid metabolism ,Aquaculture. Fisheries. Angling ,SH1-691 - Abstract
The Chinese mitten crab (Eriocheir sinensis, CMC) is of significant economic importance to China's aquatic industry. However, the prevalence of Planktothricoides-dominated cyanobacterial blooms (CBs) pose a substantial threat to this aquaculture sector. Despite their impact, there is limited understanding of how these CBs affect the digestive systems of CMCs. This study aims to investigate the effects of CBs dominated by Planktothricoides on CMC growth, intestinal bacterial communities, metabolism, and digestive enzyme activity. Our findings indicate that CBs dominated by Planktothricoides impede CMC growth and significantly alter immune and digestive enzyme activities. Notably, a decline in the richness and Shannon diversity of the intestinal bacterial community were observed, along with shifts in its structure and composition. The abundance of Epsilonbacteraeota, a group containing various conditional pathogens, reached 21.40 % at the family level in the CB group. A total of 26 bacteria were identified as potential pathogens in the CMC intestine. While immune activities demonstrated a strong correlation with potential pathogens, digestive enzyme activities were less correlated. Furthermore, CBs significantly impacted the metabolic pathways in the CMC intestine, leading to a marked reduction in several metabolites involved in lipid metabolism. In conclusion, this study focuses on the impact of CBs in natural environments on the digestive system of CMCs. It fills the knowledge gap regarding the actual negative effects of CBs on CMCs. Urgent interventions are warranted to support the prevention and control of CBs in CMC culture.
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- 2024
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3. The Personality Traits and Interactive Behavior of Chinese Mitten Crab (Eriocheir sinensis)
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Jianyang Sun, Dongxin Zhang, Yuhang Hong, Chengyi Weng, Yangyang Pang, Yongxu Cheng, and Xiaozhen Yang
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Eriocheir sinensis ,personality traits ,interactive behavior ,agonistic crab ,Biology (General) ,QH301-705.5 ,Genetics ,QH426-470 - Abstract
Agonistic behavior is a common behavior among agonistic Chinese mitten crabs (Eriocheir sinensis). Such behavior often leads to limb loss or physical impairment, and significantly affects the survival, growth, and quality of the crabs, and even the yield and economic value for E. sinensis. Agonistic behavior often occurs in agonistic crabs, which is closely related to personality traits and interactive behavior of animals. E. sinensis has personality traits such as boldness, aggression, and exploration as evidenced by the partition-crossing experiment, mirror experiment, and shelter experiment. Agonistic crabs were identified as individuals with boldness, high aggression, and high exploration. The interactive behavior spectrum of E. sinensis was first obtained, consisting of 15 behaviors. This spectrum described and summarized all interactive behaviors of E. sinensis during fights. The interactive behavior characteristics of agonistic crabs were identified as darting, intimidating, grabbing, pushing, stretching, and visitation. These results lay a theoretical basis for in-depth behavioral research on E. sinensis in the future. The technique of identifying agonistic crabs by personality traits and interactive behaviors not only allows for the elimination of agonistic crabs from the aquaculture process and the reduction in negative impacts caused by aggressive crabs, but also allows for the breeding of non-agonistic crabs and the further reduction in the economic losses caused by fighting behaviors.
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- 2024
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4. All-passive microwave-diode nonreciprocal metasurface
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Xiaozhen Yang, Erda Wen, and Daniel Sievenpiper
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Astrophysics ,QB460-466 ,Physics ,QC1-999 - Abstract
Abstract Breaking reciprocity in the microwave frequency range is strongly desirable in the development of modern electronic systems, as it enables nonreciprocal wave absorbing, nonreciprocal beam steering, frequency conversion, and protection of sensitive devices from high energy sources. However, the typical approaches involve bulky biasing magnets or complex spatial-temporal modulations. As such, resorting to lightweight and all-passive platforms would result in optimal configurations and efficient integration. Starting from a circuit model, we theoretically demonstrate the nonreciprocal behavior on a transmission line building block creating a strong field asymmetry with a switchable matching stub to enable two distinct working states. After translating to an electromagnetic model, this concept is first proved by simulation and then experimentally verified on a microstrip-line-based diode-integrated metasurface showing nonreciprocal transmission. This printed circuit board design is expected to find various applications in electromagnetic protecting layers, communication systems, microwave isolators and circulators.
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- 2023
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5. Real-data-driven real-time reconfigurable microwave reflective surface
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Erda Wen, Xiaozhen Yang, and Daniel F. Sievenpiper
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Science - Abstract
Abstract Manipulating the electromagnetic (EM) scattering behavior from an arbitrary surface dynamically on arbitrary design goals is an ultimate ambition for many EM stealth and communication problems, yet it is nearly impossible to accomplish with conventional analysis and optimization techniques. Here we present a reconfigurable conformal metasurface prototype as well as a workflow that enables it to respond to multiple design targets on the reflection pattern with extremely low on-site computing power and time. The metasurface is driven by a sequential tandem neural network which is pre-trained using actual experimental data, avoiding any possible errors that may arise from calculation, simulation, or manufacturing tolerances. This platform empowers the surface to operate accurately in a complex environment including varying incident angle and operating frequency, or even with other scatterers present close to the surface. The proposed data-driven approach requires minimum amount of prior knowledge and human effort yet provides maximized versatility on the reflection control, stepping towards the end form of intelligent tunable EM surfaces.
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- 2023
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6. Autologous parathyroid gland in left-brachioradialis transplantation: A single-center study and long-term follow-up
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Jianbo Li, Qinghu Tang, Xiaozhen Yang, Gaofei He, Chengping Lin, and Deguang Zhang
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Parathyroid transplantation ,Left forearm ,Follow-up ,Survival rate ,Hypoparathyroidism ,Surgery ,RD1-811 - Abstract
Parathyroid gland transplantation into the sternocleidomastoid muscle is effective, but it is not possible to confirm transplant survival with this method. In this study, we evaluated parathyroid autotransplantation into the brachioradialis muscle and its survival rate. Objectives: To evaluate autologous parathyroid gland left forearm brachioradial muscle transplantation and its survival rate. Summary background data: The most commonly used transplantation site is the sternocleidomastoid muscle, but transplant survival cannot be confirmed using this method. Autologous parathyroid gland left forearm brachioradial muscle transplantation solves this problem, and we evaluate the transplant survival using this method. Methods: We followed-up patients who underwent thyroidectomy and autologous parathyroid left forearm brachioradial muscle transplantation in our center from September 2013 to January 2018. The last follow-up date was January 2021; all enrolled patients underwent at least 3 years of follow-up. We calculated the transplant survival rate at several time points. Results: We evaluated 238 transplanted cases, for which the long-term survival rate was 85.7% (204/238), and the short-term survival rate was 86.1% (205/238). Sixty-five cases had two parathyroid glands transplanted into the left forearm brachioradialis muscle. The long-term survival rate was 92.3% (60/65), and the short-term survival rate was 95.4% (62/65). Conclusions: Autologous parathyroid gland left brachioradialis transplantation is a reliable, measurable method with good survival rate, and we recommend this method for consideration for transplanting parathyroid glands in thyroidectomy.
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- 2023
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7. Effects of Dietary L-TRP on Immunity, Antioxidant Capacity and Intestinal Microbiota of the Chinese Mitten Crab (Eriocheir Sinensis) in Pond Culture
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Mengna Hou, Yangyang Pang, Chao Niu, Dongxin Zhang, Ying Zhang, Zhiqiang Liu, Yameng Song, Aoya Shi, Qing Chen, Junyan Zhang, Yongxu Cheng, and Xiaozhen Yang
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Eriocheir sinensis ,L-tryptophan ,immunity ,antioxidant capacity ,intestinal microbiota ,Microbiology ,QR1-502 - Abstract
L-tryptophan (L-TRP) is an essential amino acid for the normal growth of crustaceans. As a nutritional supplement and antioxidant, L-TRP has the function of immune and antioxidant capacity regulation. From July to November, the effects of L-TRP on the immunity, antioxidant capacity and intestinal microflora of the Chinese mitten crab (Eriocheir sinensis) in pond culture were investigated. After feeding an L-TRP diet for 30 (named as August), 60 (named as September) and 106 (named as November) days, respectively, the activities of the immune and antioxidant enzymes in the hepatopancreas and hemolymph were evaluated, and the intestinal microbiota were profiled via high-throughput Illumina sequencing. The results showed that supplementation of L-TRP significantly increased the activities of AKP in the hepatopancreas in September, and significantly increased the activities of ACP in the hepatopancreas in August and September, and the hemolymph’s ACP activities also significantly increased in August and November (p < 0.05). Similarly, the activities of SOD, AOC and POD in the hepatopancreas significantly increased in September and November (p < 0.05) after feeding the L-TRP diet; meanwhile, the activities of SOD and AOC in the hemolymph also significantly increased in August (p < 0.05). However, in August, the L-TRP diet resulted in a significant increase in MDA activity in the hepatopancreas and hemolymph (p < 0.05). In addition, the results of the intestinal microbiota analysis showed that Firmicutes, Bacteroidetes and Proteobacteria were the dominant phyla in August, September and November, and Patescibacteria was the dominant phylum in September and November. After feeding the L-TRP diet, the richness of Cyanobacteria and Desulfobacterota significantly increased in August (p < 0.05), and the richness of Actinobacteriota significantly decreased in September (p < 0.05). Moreover, the L-TRP supplementation significantly reduced the abundance of ZOR0006 in the Firmicutes in September (p < 0.05). In conclusion, dietary L-TRP could improve the immunity and antioxidant ability and impact the intestinal health of E. sinensis at the early stage of pond culturing. However, long-term feeding of an L-TRP diet might have no positive impact on the activities of the immune, antioxidant enzymes and intestinal microbiota.
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- 2022
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8. Prediction early recurrence of hepatocellular carcinoma eligible for curative ablation using a Radiomics nomogram
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Chunwang Yuan, Zhenchang Wang, Dongsheng Gu, Jie Tian, Peng Zhao, Jingwei Wei, Xiaozhen Yang, Xiaohan Hao, Di Dong, Ning He, Yu Sun, Wenfeng Gao, and Jiliang Feng
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Hepatocellular carcinoma ,Radiomics ,Recurrence ,forecasting ,Ablation techniques ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background Predicting early recurrence (ER) after radical therapy for HCC patients is critical for the decision of subsequent follow-up and treatment. Radiomic features derived from the medical imaging show great potential to predict prognosis. Here we aim to develop and validate a radiomics nomogram that could predict ER after curative ablation. Methods Total 184 HCC patients treated from August 2007 to August 2014 were included in the study and were divided into the training (n = 129) and validation(n = 55) cohorts randomly. The endpoint was recurrence free survival (RFS). A set of 647 radiomics features were extracted from the 3 phases contrast enhanced computed tomography (CECT) images. The minimum redundancy maximum relevance algorithm (MRMRA) was used for feature selection. The least absolute shrinkage and selection operator (LASSO) Cox regression model was used to build a radiomics signature. Recurrence prediction models were built using clinicopathological factors and radiomics signature, and a prognostic nomogram was developed and validated by calibration. Results Among the four radiomics models, the portal venous phase model obtained the best performance in the validation subgroup (C-index = 0.736 (95%CI:0.726–0.856)). When adding the clinicopathological factors to the models, the portal venous phase combined model also yielded the best predictive performance for training (C-index = 0.792(95%CI:0.727–0.857) and validation (C-index = 0.755(95%CI:0.651–0.860) subgroup. The combined model indicated a more distinct improvement of predictive power than the simple clinical model (ANOVA, P
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- 2019
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9. Comprehensive Utilization of Land Resources for Photovoltaic Power Generation to Culture Chinese Mitten Crab (Eriocheir sinensis): Growth Performance, Nutritional Composition and Tissue Color
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Yangyang Pang, Chao Niu, Lifeng Wu, Yameng Song, Xiaozhe Song, Ao-ya Shi, Xingliang Shi, Zong-wen Wu, Boping Tang, Xiaozhen Yang, and Yongxu Cheng
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aquavoltaic system ,Eriocheir sinensis ,growth performance ,nutritional composition ,tissue color ,Biology (General) ,QH301-705.5 ,Genetics ,QH426-470 - Abstract
The assertive growth of photovoltaics (PV) will occupy a lot of land resources. There is also a needed land resource to expand the culturing area of Eriocheir sinensis. The aquavoltaic systems offer a potential solution to integrate PV power and E. sinensis culturing. In this study, we cultured E. sinensis in an area of PV panels (PV group) and an area with no PV panels (control group), respectively. The results showed that the weight gain rate, body length, body width, and meat yield of male crabs in the PV group significantly increases. In addition, the moisture of muscles, hepatopancreas, and testes in the PV group has significantly increased, and the total lipids of the hepatopancreas and muscles in the PV group were significantly decreased. Moreover, the PV panels affected the content of eight amino acids in different tissues, including Met, Arg, Cys, Pro, Gly, Leu, Tyr, and His. In addition, several saturated fatty acids (SFA), monounsaturated fatty acids (MUFA), and polyunsaturated fatty acids (PUFA) had been significantly influenced by the PV panels. ∑MUFA, docosahexaenoic acid (DHA), ∑n-3 PUFA, ∑n-6 PUFA, and n-3/n-6 PUFA ratio (p < 0.05) in the PV group had significantly decreased. The results of tissue color showed that the L* value of ovaries was significantly higher than in the control group, and a* and b* values of hepatopancreas were significantly lower. In conclusion, PV panels could promote growth performance and amino acid nutrition of crabs. However, the PV panels had a few negative influences on the fatty acid composition and tissue color.
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- 2022
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10. Identification and Integrated Analysis of MicroRNA and mRNA Expression Profiles During Agonistic Behavior in Chinese Mitten Crab (Eriocheir sinensis) Using a Deep Sequencing Approach
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Yangyang Pang, Long He, Yameng Song, Xiaozhe Song, Jiahuan Lv, Yongxu Cheng, and Xiaozhen Yang
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Eriocheir sinensis ,agonistic behavior ,microRNA ,mRNA ,neurogenesis ,energy metabolism ,Genetics ,QH426-470 - Abstract
As a commercially important species, the Chinese mitten crab (Eriocheir sinensis) has been cultured for a long time in China. Agonistic behavior often causes limb disability and requires much energy, which is harmful to the growth and survival of crabs. In this paper, we divided crabs into a control group (control, no treatment) and an experimental group (fight, agonistic behavior after 1 h) and then collected the thoracic ganglia (TG) to extract RNA. Subsequently, we first used a deep sequencing approach to examine the transcripts of microRNAs (miRNAs) and messenger RNAs (mRNAs) in E. sinensis displaying agonistic behavior. According to the results, we found 29 significant differentially expressed miRNAs (DEMs) and 116 significant differentially expressed unigenes (DEGs). The DEMs esi-miR-199a-5p, esi-let-7d, esi-miR-200a, and esi-miR-200b might participate in the regulation of agonistic behavior by mediating neuroregulation and energy metabolism. Focusing on the transcripts of the mRNAs, the renin–angiotensin system (RAS) Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway might be involved in the regulation of agonistic behavior through glucose metabolism as this pathway was significantly enriched with DEGs. Besides, an integrated analysis of the miRNA and mRNA profiles revealed that the retinoid X receptor (RXR) was also involved in visual signal transduction, which was important for agonistic behavior. In addition, four vital agonistic behavior-related metabolic pathways, including the cAMP signaling, MAPK, protein digestion and absorption, and fatty acid metabolism pathways, were significantly enriched with the predicted target unigenes. In conclusion, the findings of this study might provide important insight enhancing our understanding of the underlying molecular mechanisms of agonistic behavior in E. sinensis.
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- 2020
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11. The complete mitochondrial genome of Monochamus alternatus alternatus (Coleoptera: Cerambycidae)
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Qiliao Liao, Xiaozhen Yang, Jiayi Ma, Liangjing Sheng, and Shuangquan Zou
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complete mitochondrial genome ,monochamus alternatus alternatus ,phylogenetic analysis ,Genetics ,QH426-470 - Abstract
Monochamus alternatus alternatus is the major vector of pinewood nematode, Bursaphelenchus xylophilus, in Asia. The length of the complete mitochondria genome of M. alternatus alternatus was 15,880 bp with 21% GC content, including 39.7% A, 12.3% C, 8.7% G and 39.3% T. There were 13 protein-coding genes, 22 tRNAs, 2 rRNAs, and one AT-rich region. This study provides a useful genetic information for subsequent study of the differences between M. alternatus subspecies.
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- 2020
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12. The complete mitochondrial genome of Myrmeleon formicarius (Neuroptera: Myrmeleontidae)
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Jieqin Wu, Shaozhen Wang, Xiaozhen Yang, Yajie Guo, Xiaoqian Weng, and Songqing Wu
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complete mitochondrial genome ,myrmeleon formicarius ,phylogenetic analysis ,Genetics ,QH426-470 - Abstract
In this study, the first complete mitochondrial genome of Myrmeleon formicarius was sequenced. The length of the complete mitochondrial genome of M. formicarius was 16,179 bp with 25.19% GC content. There were 13 protein-coding genes (CDS), 22 transfer RNA genes (tRNA), two ribosomal RNA genes (rRNA), and an AT-rich region. Phylogenetic analysis showed that M. formicarius was closely related to M. immanis. This study provides useful genetic information to better understand the genetic evolution of Myrmeleontidae.
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- 2020
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13. Knockout of Two Cry-Binding Aminopeptidase N Isoforms Does Not Change Susceptibility of Aedes aegypti Larvae to Bacillus thuringiensis subsp. israelensis Cry4Ba and Cry11Aa Toxins
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Junxiang Wang, Xiaozhen Yang, Huan He, Jingru Chen, Yuanyuan Liu, Wanting Huang, Luru Ou, Zhaohui Yang, Xiong Guan, Lingling Zhang, and Songqing Wu
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Aedes aegypti ,Cry4Ba ,Cry11Aa ,aminopeptidase N ,CRISPR/Cas9 ,Science - Abstract
The insecticidal Cry4Ba and Cry11Aa crystal proteins from Bacillus thuringiensis subsp. israelensis (Bti) are highly toxic to Ae. aegypti larvae. The glycosylphosphatidylinositol (GPI)-anchored APN was identified as an important membrane-bound receptor for multiple Cry toxins in numerous Lepidoptera, Coleoptera, and Diptera insects. However, there is no direct molecular evidence to link APN of Ae. aegypti to Bti toxicity in vivo. In this study, two Cry4Ba/Cry11Aa-binding Ae. aegypti GPI-APN isoforms (AeAPN1 and AeAPN2) were individually knocked-out using CRISPR/Cas9 mutagenesis, and the AeAPN1/AeAPN2 double-mutant homozygous strain was generated using the reverse genetics approach. ELISA assays showed that the high binding affinity of Cry4Ba and Cry11Aa protoxins to the midgut brush border membrane vesicles (BBMVs) from these APN knockouts was similar to the background from the wild-type (WT) strain. Likewise, the bioassay results showed that neither the single knockout of AeAPN1 or AeAPN2, nor the simultaneous disruption of AeAPN1 and AeAPN2 resulted in significant changes in susceptibility of Ae. aegypti larvae to Cry4Ba and Cry11Aa toxins. Accordingly, our results suggest that AeAPN1 and AeAPN2 may not mediate Bti Cry4Ba and Cry11Aa toxicity in Ae. aegypti larvae as their binding proteins.
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- 2021
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14. Phenylpropanoid Pathway Engineering: An Emerging Approach towards Plant Defense
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Vivek Yadav, Zhongyuan Wang, Chunhua Wei, Aduragbemi Amo, Bilal Ahmed, Xiaozhen Yang, and Xian Zhang
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phenylpropanoid pathway ,plant defense ,lignin ,monolignol pathway ,broad spectrum resistance ,Medicine - Abstract
Pathogens hitting the plant cell wall is the first impetus that triggers the phenylpropanoid pathway for plant defense. The phenylpropanoid pathway bifurcates into the production of an enormous array of compounds based on the few intermediates of the shikimate pathway in response to cell wall breaches by pathogens. The whole metabolomic pathway is a complex network regulated by multiple gene families and it exhibits refined regulatory mechanisms at the transcriptional, post-transcriptional, and post-translational levels. The pathway genes are involved in the production of anti-microbial compounds as well as signaling molecules. The engineering in the metabolic pathway has led to a new plant defense system of which various mechanisms have been proposed including salicylic acid and antimicrobial mediated compounds. In recent years, some key players like phenylalanine ammonia lyases (PALs) from the phenylpropanoid pathway are proposed to have broad spectrum disease resistance (BSR) without yield penalties. Now we have more evidence than ever, yet little understanding about the pathway-based genes that orchestrate rapid, coordinated induction of phenylpropanoid defenses in response to microbial attack. It is not astonishing that mutants of pathway regulator genes can show conflicting results. Therefore, precise engineering of the pathway is an interesting strategy to aim at profitably tailored plants. Here, this review portrays the current progress and challenges for phenylpropanoid pathway-based resistance from the current prospective to provide a deeper understanding.
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- 2020
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15. Dietary L-Tryptophan Modulates the Hematological Immune and Antibacterial Ability of the Chinese Mitten Crab, Eriocheir sinensis, Under Cheliped Autotomy Stress
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Cong Zhang, Qian Zhang, Xiaozhe Song, Yangyang Pang, Yameng Song, Yongxu Cheng, and Xiaozhen Yang
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Eriocheir sinensis ,autotomy cheliped ,L-tryptophan ,hematological immune ,antioxidant capacity ,Immunologic diseases. Allergy ,RC581-607 - Abstract
In pond cultures of juvenile Eriocheir sinensis, limb autotomy stress seriously affects and restricts the quality and economic benefits of aquaculture. This study was designed to evaluate the effects of dietary supplementation of L-tryptophan on E. sinensis under the cheliped autotomy stress. In the present study, 252 crabs were divided into four groups: dietary L-trp supplementation with 0.28, 0.40, 0.53, and 0.70%, and their hematological immunity, antioxidant capacity, anti-stress, and antibacterial ability were evaluated after 14 days of using biochemical analysis, flow cytometry, and molecular biology techniques. First, we counted the mortality after 14 days of feeding and found that compared with other treatments, dietary supplementation of 0.53 and 0.70% L-trp significantly lowered the mortality of E. sinensis. Moreover, the total hemocyte count (THC), hemocyanin, and glutathione (GSH) content, and glutathione peroxidase (GSH-Px) activity significantly increased at 7 and 14 d with dietary supplementation of 0.53 and 0.70% L-trp, in contrast with the significant decrease in malondialdehyde (MDA) content at 14 d in the same dietary groups (P
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- 2018
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16. Proteomic Analysis of the Hepatopancreas of Chinese Mitten Crabs (Eriocheir sinensis) Fed With a Linoleic Acid or α-Linolenic Acid Diet
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Banghong Wei, Zhigang Yang, Yongxu Cheng, Junyu Zhou, Hang Yang, Long Zhang, and Xiaozhen Yang
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Eriocheir sinensis ,proteome ,hepatopancreas ,linoleic acid ,α-linolenic acid ,label-free quantification ,Physiology ,QP1-981 - Abstract
As representatives of n-6 and n-3 fatty acids, many studies have analyzed the use of soybean oil and linseed oil rich in linoleic acid (18:2n-6, LA) and α-linolenic acid (18:3n-3, LNA) as better substitutes for fish oil. In aquatic animals, different dietary ratios of LA and LNA could have significant effects on growth, lipid metabolism, immune response, and reproduction. To assess the nutritive value of these two fatty acids in Chinese mitten crab (Eriocheir sinensis), we performed transcriptome analysis and label-free quantification proteomic analysis of the hepatopancreas from mitten crabs fed with LA or LNA diet. Parallel reaction monitoring was used to confirm the reliability of the proteomic analysis. A total of 186 proteins were differentially expressed with fold change ≥1.5 or ≤0.666. Among the 186 proteins, 116 were upregulated and 70 were downregulated in the LA than LNA. Most of these proteins participate in cellular process and metabolism process and have molecular functions such as binding and catalytic activity; the cellular component of these proteins are cell, cell part, membrane, and membrane part. A total of 18 proteins were identified to be related to lipid, carbohydrate, and protein metabolism, and they mainly participate in digestive enzyme activities, fatty acid transport, and glycolysis. Our results provide new insights for further investigation into the replacement of fish oil from mitten crabs with vegetable oils and enable us to better understand the different roles and nutrition value of LA and LNA in mitten crabs.
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- 2018
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17. The Hyperglycemic Effect of Melatonin in the Chinese Mitten Crab, Eriocheir sinensis
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Xiaozhen Yang, Minjie Xu, Genyong Huang, Cong Zhang, Yangyang Pang, Zhigang Yang, and Yongxu Cheng
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melatonin ,glucose ,eyestalk ,crustacean hyperglycemic hormone ,Eriocheir sinensis ,Physiology ,QP1-981 - Abstract
Melatonin has been identified in a variety of invertebrate species, but its function is not as well understood as in crustaceans. The effects of melatonin on hemolymph glucose levels and tissue carbohydrate metabolism in the Chinese mitten crab, Eriocheir sinensis, were fully investigated in this study. Moreover, whether the eyestalk (an important endocrine center in invertebrate species) involves in this process or not, also were clarified. Analysis revealed that eyestalk ablation, especially bilateral, caused a significant decrease in the hemolymph glucose level. Moreover, injection of melatonin induced hyperglycemia in a dose-dependent manner both in intact and ablated crabs. Based on the expression of CHH mRNA in the 10 different tissues, eyestalk, thoracic ganglion, intestinal tract and hemolymph were selected to estimate the effect of melatonin on the expression of CHH mRNA. Bilateral eyestalk ablation caused a significant increase in the expression of CHH mRNA in the thoracic ganglion, intestinal tract and hemolymph compared with the controls. In addition, injection of melatonin into intact or ablated crabs elevated the CHH mRNA level in the eyestalk, thoracic ganglion and intestinal tract tissues compared with controls. The hemolymph CHH mRNA after melatonin injection was elevated only in ablated crabs. Administration of melatonin resulted in a significant decrease in total carbohydrates and glycogen levels with an increase in phosphorylase activity levels in the hepatopancreas and muscle in intact and ablated crabs. Our findings demonstrated that melatonin can induce hyperglycemic effects in both intact and ablated crabs, suggesting that this effect is probably not mediated solely via eyestalk.
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- 2018
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18. Identification and expression analyses of WRKY genes reveal their involvement in growth and abiotic stress response in watermelon (Citrullus lanatus).
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Xiaozhen Yang, Hao Li, Yongchao Yang, Yongqi Wang, Yanling Mo, Ruimin Zhang, Yong Zhang, Jianxiang Ma, Chunhua Wei, and Xian Zhang
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Medicine ,Science - Abstract
Despite identification of WRKY family genes in numerous plant species, a little is known about WRKY genes in watermelon, one of the most economically important fruit crops around the world. Here, we identified a total of 63 putative WRKY genes in watermelon and classified them into three major groups (I-III) and five subgroups (IIa-IIe) in group II. The structure analysis indicated that ClWRKYs with different WRKY domains or motifs may play different roles by regulating respective target genes. The expressions of ClWRKYs in different tissues indicate that they are involved in various tissue growth and development. Furthermore, the diverse responses of ClWRKYs to drought, salt, or cold stress suggest that they positively or negatively affect plant tolerance to various abiotic stresses. In addition, the altered expression patterns of ClWRKYs in response to phytohormones such as, ABA, SA, MeJA, and ETH, imply the occurrence of complex cross-talks between ClWRKYs and plant hormone signals in regulating plant physiological and biological processes. Taken together, our findings provide valuable clues to further explore the function and regulatory mechanisms of ClWRKY genes in watermelon growth, development, and adaption to environmental stresses.
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- 2018
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19. Cloning and functional characterization of the DA2 receptor gene in Chinese mitten crab (Eriocheir sinensis).
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Xiaozhen Yang, Genyong Huang, Min-Jie Xu, Cong Zhang, Yongxu Cheng, and Zhigang Yang
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Medicine ,Science - Abstract
Dopamine (DA) plays a modulatory role in numerous physiological processes such as light adaptation and food intake, and exerts these functions through DA receptors (DARs). This study presents, for the first time, isolation and characterization of the dopamine receptor 2(DA2 receptor) cDNA from the intestinal tissue of Eriocheir sinensis, an economically important freshwater aquaculture species in China. The DA2 receptor cDNA sequence, which was obtained by rapid amplification of cDNA ends, is 2369bp long, encode peptide of 589 amino acid, and is highly homologous to related sequences in crustaceans. Analysis of the deduced amino acid sequence and the structure of the DA2 indicated that this receptor is a member of the family of G protein-coupled receptors (GPCRs), as it contains seven transmembrane domains and other common signatures of GPCRs. RT-PCR showed that the expression of the DA2 receptor gene was distributed in various tissues, and high expression levels were observed in the cranial ganglia and the thoracic ganglia. Further study of the effect of photoperiod on DA2 expression showed that constant darkness induced a significant increase in DA2 expression in the cranial ganglia. Finally, analysis of DA2 receptor expression under different feeding statuses showed that there was significantly greater expression in the hepatopancreas and intestines after feeding than before feeding, but there were no differences in expression between the before feeding and during feeding periods in either tissue. Our results indicate that the DA2 receptor structurally belongs to the family of G protein-coupled receptors, and that the cranial ganglia are the main tissues in which the DA2 receptor participates in light adaptation during dark hours. In addition, the DA2 receptor in E. sinensis may be involved in the physiological regulation of the hepatopancreas and digestive tract after the ingestion of food. This study provides a foundation for further exploration of the light adaptation and digestive functions of the DA2 receptor in decapods.
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- 2018
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20. Genome-wide identification and expression analysis of calcium‑dependent protein kinase and its related kinase gene families in melon (Cucumis melo L.).
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Haifei Zhang, Chunhua Wei, Xiaozhen Yang, Hejie Chen, Yongchao Yang, Yanling Mo, Hao Li, Yong Zhang, Jianxiang Ma, Jianqiang Yang, and Xian Zhang
- Subjects
Medicine ,Science - Abstract
The calcium-dependent protein kinase (CDPK) is a ser/thr protein kinase that plays vital roles in plant growth, development, and responses to multiple stresses. Despite an important member of the stress responsive gene family, little is known about the evolutionary history and expression patterns of CDPK genes in melon. Herein, a total of 18 CDPK genes and 7 CDPK-related protein kinases (CRK) genes were identified in the melon genome via bioinformatic analysis, which were unevenly distributed across eleven chromosomes with an apparent exception for chromosome 3. Comparative syntenic analysis between Cucumis melo L. and Arabidopsis thaliana revealed that 13 CmCDPKs and 19 AtCPKs existed in 20 corresponding syntenic blocks. In addition, based on gene structure and phylogenetic analyses, all CmCDPKs were divided into four groups (CDPK I-IV) and CmCRKs clustered into one group (CRK I). Interestingly, group CDPK IV was clearly distinct from the other three CDPK groups, but clustered with CRK I on the phylogenetic tree, implying their origination from a common ancestor. Furthermore, CmCDPKand CmCRK genes were differentially expressed in response to various stimuli, such as biotic stress (Podosphaera xanthii), abiotic stress (salt and cold), and hormone (abscisic acid) treatment. To our knowledge, this is the first report on CDPK and CRK gene families in melon, which provides a basic foundation for functional characterizations of CmCDPK and CmCRK genes in the future.
- Published
- 2017
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- View/download PDF
21. A multi‐scale, multi‐region and attention mechanism‐based deep learning framework for prediction of grading in hepatocellular carcinoma
- Author
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Jingwei, Wei, Qian, Ji, Yu, Gao, Xiaozhen, Yang, Donghui, Guo, Dongsheng, Gu, Chunwang, Yuan, Jie, Tian, and Dawei, Ding
- Subjects
General Medicine - Abstract
Histopathological grading is a significant risk factor for postsurgical recurrence in hepatocellular carcinoma (HCC). Preoperative knowledge of histopathological grading could provide instructive guidance for individualized treatment decision-making in HCC management.This study aims to develop and validate a newly proposed deep learning model to predict histopathological grading in HCC with improved accuracy.In this dual-center study, we retrospectively enrolled 384 HCC patients with complete clinical, pathological and radiological data. Aiming to synthesize radiological information derived from both tumor parenchyma and peritumoral microenvironment regions, a modeling strategy based on a multi-scale and multi-region dense connected convolutional neural network (MSMR-DenseCNNs) was proposed to predict histopathological grading using preoperative contrast enhanced computed tomography (CT) images. Multi-scale inputs were defined as three-scale enlargement of an original minimum bounding box in width and height by given pixels, which correspondingly contained more peritumoral analysis areas with the enlargement. Multi-region inputs were defined as three regions of interest (ROIs) including a squared ROI, a precisely delineated tumor ROI, and a peritumoral tissue ROI. The DenseCNN structure was designed to consist of a shallow feature extraction layer, dense block module, and transition and attention module. The proposed MSMR-DenseCNN was pretrained by the ImageNet dataset to capture basic graphic characteristics from the images and was retrained by the collected retrospective CT images. The predictive ability of the MSMR-DenseCNN models on triphasic images was compared with a conventional radiomics model, radiological model and clinical model.MSMR-DenseCNN applied to the delayed phase (DP) achieved the highest area under the curve (AUC) of 0.867 in the validation cohort for grading prediction, outperforming those on the arterial phase (AP) and portal venous phase (PVP). Fusion of the results on triphasic images did not increase the predictive ability, which underscored the role of DP for grading prediction. Compared with a single-scale and single-region network, the DP-phase based MSMR-DenseCNN model remarkably raised sensitivity from 67.4% to 75.5% with comparable specificity of 78.6%. MSMR-DenseCNN on DP defeated conventional radiomics, radiological and clinical models, where the AUCs were correspondingly 0.765, 0.695 and 0.612 in the validation cohort.The MSMR-DenseCNN modeling strategy increased the accuracy for preoperative prediction of grading in HCC, and enlightens similar radiological analysis pipelines in a variety of clinical scenarios in HCC management. This article is protected by copyright. All rights reserved.
- Published
- 2022
- Full Text
- View/download PDF
22. Melatonin feeds promoted the growth of Elodea nuttallii by chlorophyll, devoid of the adverse effects on water quality
- Author
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Xiaozhen Yang, Xueli Ma, Chao Niu, Aoya Shi, Yameng Song, Yangyang Pang, and Yongxu Cheng
- Subjects
Aquatic Science - Published
- 2022
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- View/download PDF
23. Povidone-iodine modulates the antioxidant capacity, immunity, and resistance to Aeromonas hydrophila of the Chinese mitten crab, Eriocheir sinensis
- Author
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Xiaowen Yu, Ningbo Sun, Yongxu Cheng, and Xiaozhen Yang
- Subjects
Aquatic Science ,Agronomy and Crop Science - Published
- 2022
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- View/download PDF
24. Advances in Metasurfaces: Topology, Chirality, Patterning, and Time Modulation
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Shreya Singh, Robert J. Davis, Dia'aaldin J. Bisharat, Jiyeon Lee, Sara M. Kandil, Erda Wen, Xiaozhen Yang, Yun Zhou, Prabhakar R. Bandaru, and Daniel F. Sievenpiper
- Subjects
Electrical and Electronic Engineering ,Condensed Matter Physics - Published
- 2022
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- View/download PDF
25. Response of Chinese mitten crab (Eriocheir sinensis) intestinal microbiota to commercial probiotic application
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Tong Li, Demin Zhang, Yunfei Sun, Xiaozhen Yang, Wenwen Xiao, Yongxu Cheng, and Zhiyuan Yao
- Subjects
Aquatic Science - Published
- 2022
- Full Text
- View/download PDF
26. Power-Dependent Metasurface With Self-Induced Bandgap
- Author
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Xiaozhen Yang, Erda Wen, and Daniel F. Sievenpiper
- Subjects
Electrical and Electronic Engineering - Published
- 2022
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27. Simultaneous Beam-Steering and Polarization Conversion Using a Varactor-Integrated Metasurface
- Author
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Xiaozhen Yang, Dinesh Bharadia, and Daniel F. Sievenpiper
- Published
- 2023
- Full Text
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28. Generative Neural Network Enables Reconfigurable Metasurface on Real-Time Free-Form Targets
- Author
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Erda Wen, Xiaozhen Yang, and Daniel F. Sievenpiper
- Published
- 2023
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29. Effects of microbe-derived antioxidants on growth, digestive and aminotransferase activities, and antioxidant capacities in the hepatopancreas of Eriocheir sinensis under ammonia nitrogen stress
- Author
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Aoya Shi, Huan Ma, Xingliang Shi, Wenquan Zhou, Wangjun Pan, Yameng Song, Qing Chen, Xiaowen Yu, Chao Niu, Yingfei Yang, Yongxu Cheng, and Xiaozhen Yang
- Subjects
Ecology ,Aquatic Science ,Ecology, Evolution, Behavior and Systematics - Published
- 2023
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30. Spectroscopic Analysis of Structural Transformations Associated with Poly(lactic acid)
- Author
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Shaw L. Hsu and Xiaozhen Yang
- Published
- 2021
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31. Dual-Activated Nano-Prodrug for Chemo-Photodynamic Combination Therapy of Breast Cancer
- Author
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Ziyao Lu, Gan Xu, Xiaozhen Yang, Shijia Liu, Yang Sun, Li Chen, Qinying Liu, and Jianyong Liu
- Subjects
Photosensitizing Agents ,Organic Chemistry ,Breast Neoplasms ,General Medicine ,Catalysis ,Computer Science Applications ,Inorganic Chemistry ,Mice ,Photochemotherapy ,Cell Line, Tumor ,Humans ,Animals ,Nanoparticles ,Female ,Prodrugs ,Physical and Theoretical Chemistry ,nano-prodrug ,photodynamic therapy ,reactive oxygen species ,activation ,combination therapy ,Reactive Oxygen Species ,Molecular Biology ,Spectroscopy - Abstract
Herein, we developed a dual-activated prodrug, BTC, that contains three functional components: a glutathione (GSH)-responsive BODIPY-based photosensitizer with a photoinduced electron transfer (PET) effect between BODIPY and the 2,4-dinitrobenzenesulfonate (DNBS) group, and an ROS-responsive thioketal linker connecting BODIPY and the chemotherapeutic agent camptothecin (CPT). Interestingly, CPT displayed low toxicity because the active site of CPT was modified by the BODIPY-based macrocycle. Additionally, BTC was encapsulated with the amphiphilic polymer DSPE-mPEG2000 to improve drug solubility and tumor selectivity. The resulting nano-prodrug passively targeted tumor cells through enhanced permeability and retention (EPR) effects, and then the photosensitizing ability of the BODIPY dye was restored by removing the DNBS group with the high concentration of GSH in tumor cells. Light-triggered ROS from activated BODIPY can not only induce apoptosis or necrosis of tumor cells but also sever the thioketal linker to release CPT, achieving the combination treatment of selective photodynamic therapy and chemotherapy. The antitumor activity of the prodrug has been demonstrated in mouse mammary carcinoma 4T1 and human breast cancer MCF-7 cell lines and 4T1 tumor-bearing mice.
- Published
- 2022
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32. Analysis of health informatics and bioinformatics connectivity modeling
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Wanxin Yang, null Xiaomei Zhang, and null Xiaozhen Yang
- Subjects
Economics and Econometrics ,Management of Technology and Innovation ,Biotechnology - Abstract
Health informatics and bioinformatics are closely linked, but the overlapping literature search rate of the analysis methods is low due to the connectivity analysis model. Therefore, a health informatics and bioinformatics connectivity modeling analysis based on a delay-tolerant network routing algorithm is proposed. The analysis is conducted for the topics of both health informatics and bioinformatics disciplines, and a reasonable design of citation measures is designed. The first step in describing the connection between the two disciplines using citation analysis is to extract multidimensional descriptive vectors for the disciplines as a basis for connectivity analysis. The connectivity analysis model is designed with the core of the tolerance network routing algorithm to determine the connectivity of disciplines by detecting the citation overlap between two disciplines. Finally, the connectivity is described by outputting the co-occurrence knowledge structure between disciplines through co-occurrence analysis. The experimental results show that the proposed method improves the completeness rate by 36.6% and 39.2% compared with the conventional connectivity modeling analysis method, which indicates that the proposed method reveals more comprehensive connectivity analysis results.
- Published
- 2022
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33. Prolonged darkness attenuates imidacloprid toxicity through the brain-gut-microbiome axis in zebrafish, Danio rerio
- Author
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Yi Huang, Yuhang Hong, Shu Wu, Xiaozhen Yang, Qiang Huang, Yanzhen Dong, Dayong Xu, and Zhiqiu Huang
- Subjects
Environmental Engineering ,Environmental Chemistry ,Pollution ,Waste Management and Disposal - Published
- 2023
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34. Optimization and Application of CRISPR/Cas9 Genome Editing in a Cosmopolitan Pest, Diamondback Moth
- Author
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Zhen Zhang, Lei Xiong, Chao Xie, Lingling Shen, Xuanhao Chen, Min Ye, Linyang Sun, Xiaozhen Yang, Shuyuan Yao, Zhen Yue, Zhengjiao Liang, Minsheng You, and Shijun You
- Subjects
Gene Editing ,cell lines ,Plutella xylostella ,endogenous promoter ,plasmid delivery ,Organic Chemistry ,General Medicine ,Moths ,Catalysis ,Computer Science Applications ,Inorganic Chemistry ,Animals, Genetically Modified ,Animals ,Physical and Theoretical Chemistry ,CRISPR-Cas Systems ,Promoter Regions, Genetic ,Molecular Biology ,Spectroscopy - Abstract
The CRISPR/Cas9 system is an efficient tool for reverse genetics validation, and the application of this system in the cell lines provides a new perspective on target gene analysis for the development of biotechnology tools. However, in the cell lines of diamondback moth, Plutella xylostella, the integrity of the CRISPR/Cas9 system and the utilization of this cell lines still need to be improved to ensure the application of the system. Here, we stabilize the transfection efficiency of the P. xylostella cell lines at different passages at about 60% by trying different transfection reagents and adjusting the transfection method. For Cas9 expression in the CRIPSPR/Cas9 system, we identified a strong endogenous promoter: the 217–2 promoter. The dual-luciferase and EGFP reporter assay demonstrated that it has a driving efficiency close to that of the IE1 promoter. We constructed pB-Cas9-Neo plasmid and pU6-sgRNA plasmid for CRISPR/Cas9 system and subsequent cell screening. The feasibility of the CRISPR/Cas9 system in P. xylostella cell lines was verified by knocking out endogenous and exogenous genes. Finally, we generated a transgenic Cas9 cell line of P. xylostella that would benefit future exploitation, such as knock-in and multi-threaded editing. Our works provides the validity of the CRISPR/Cas9 system in the P. xylostella cell lines and lays the foundation for further genetic and molecular studies on insects, particularly favoring gene function analysis.
- Published
- 2022
35. Surface Wave Wavefront Formation with Photonic Graphene and Topological Waveguide
- Author
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Erda Wen, Xiaozhen Yang, and Daniel F. Sievenpiper
- Published
- 2022
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- View/download PDF
36. Effects of dietary L‐tryptophan supplementation on growth performance, food intake, digestive enzyme activity and serotonin (5‐HT) levels in juvenile Chinese mitten crab ( Eriocheir sinensis )
- Author
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Genyong Huang, Jiaxin Zhang, Minjie Xu, Xiaozhen Yang, Cong Zhang, and Yongxu Cheng
- Subjects
Chinese mitten crab ,Eriocheir ,biology ,Digestive enzyme ,Tryptophan ,biology.protein ,Juvenile ,Serotonin ,Food science ,Aquatic Science ,Digestion ,biology.organism_classification ,5-HT receptor - Published
- 2021
- Full Text
- View/download PDF
37. Construction of Zn vacancy mediated ZnS/Cu2−xS heterostructure via cation exchange reactions for broadband photocatalytic water splitting
- Author
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Dingzhou Xiang, Xuqiang Hao, Xiaozhen Yang, and Zhiliang Jin
- Subjects
General Chemical Engineering ,General Physics and Astronomy ,General Chemistry - Published
- 2023
- Full Text
- View/download PDF
38. Effects of Molybdenum on Cell Wall Component of Wheat Leaf Under Different Growth Stages
- Author
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Qiling Tan, Xuecheng Sun, Qiaoqiao Gan, Xiaozhen Yang, Songwei Wu, and Chengxiao Hu
- Subjects
0106 biological sciences ,food.ingredient ,PME activity ,Pectin ,food and beverages ,Soil Science ,chemistry.chemical_element ,04 agricultural and veterinary sciences ,Plant Science ,01 natural sciences ,Cell wall ,chemistry.chemical_compound ,Horticulture ,food ,chemistry ,Molybdenum ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,Lignin ,Hemicellulose ,Cultivar ,Cellulose ,Agronomy and Crop Science ,010606 plant biology & botany - Abstract
This study was conducted to investigate the potential effects of molybdenum (Mo) on cell wall components in both cultivars of winter wheat (Triticum aestivum L.) by using a pot experiment with two Mo levels (0 and 0.15 mg kg−1) at different growth stages. The leaves were sampled at the stages of tillering, jointing, heading, and milky in winter wheat. The results indicated that the contents of cell wall components changed with the stages of wheat growth to adapt to environmental changes, particularly before the stages of heading, the contents of lignin, cellulose, hemicellulose, and protopectin increased with the stages of wheat growth. Mo application markedly increased cellulose contents by 7.60% at the milky stage in a cultivar of 97014. Mo supply dramatically enhanced hemicelluloses contents by 26.93% and 55.41% at tillering and heading stages in a cultivar of 97003 and by 29.16% and 21.43% at jointing and heading stages in a cultivar of 97014, respectively. Mo supply significantly increased protopectin contents by 78.04%, 108.71%, and 40.62% in a cultivar of 97003 and by 89.70%, 97.03%, and 31.53% in a cultivar of 97014 at tillering, jointing, and heading stages. The increased contents of cell wall components will contribute to improving mechanical strength of leaves. However, the decreased contents of hemicelluloses, soluble pectin by Mo supply were observed at milky stages in wheat. The ratios of soluble pectin to protopectin were decreased by Mo application, confirmed by the decreased activities of pectin methylesterase (PME) in both cultivars of wheat at jointing and milky stages, suggesting that Mo inhibited the conversion of protopectin to soluble pectin by inhibiting PME activity. Overall, the components of the cell wall were affected by Mo, mainly affected the contents of hemicellulose, soluble pectin, and protopectin.
- Published
- 2021
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39. Broadband Time-Modulated Absorber beyond the Bode-Fano Limit for Short Pulses by Energy Trapping
- Author
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Xiaozhen Yang, Erda Wen, and Daniel F. Sievenpiper
- Subjects
General Physics and Astronomy - Published
- 2022
- Full Text
- View/download PDF
40. A multi-scale, multi-region and attention mechanism-based deep learning framework for prediction of grading in hepatocellular carcinoma.
- Author
-
Jingwei Wei, Qian Ji, Yu Gao, Xiaozhen Yang, Donghui Guo, Dongsheng Gu, Chunwang Yuan, Jie Tian, and Dawei Ding
- Subjects
CONVOLUTIONAL neural networks ,DEEP learning ,HEPATOCELLULAR carcinoma ,COMPUTED tomography ,RADIOMICS ,FEATURE extraction - Abstract
Background: Histopathological grading is a significant risk factor for postsurgical recurrence in hepatocellular carcinoma (HCC). Preoperative knowledge of histopathological grading could provide instructive guidance for individualized treatment decision-making in HCC management. Purpose: This study aims to develop and validate a newly proposed deep learning model to predict histopathological grading in HCC with improved accuracy. Methods: In this dual-centre study, we retrospectively enrolled 384 HCC patients with complete clinical, pathological and radiological data. Aiming to synthesize radiological information derived from both tumour parenchyma and peritumoral microenvironment regions, a modelling strategy based on a multi-scale and multi-region dense connected convolutional neural network (MSMR-DenseCNNs) was proposed to predict histopathological grading using preoperative contrast enhanced computed tomography (CT) images. Multiscale inputs were defined as three-scale enlargement of an original minimum bounding box in width and height by given pixels, which correspondingly contained more peritumoral analysis areas with the enlargement.Multi-region inputs were defined as three regions of interest (ROIs) including a squared ROI, a precisely delineated tumour ROI, and a peritumoral tissue ROI. The DenseCNN structure was designed to consist of a shallow feature extraction layer, dense block module, and transition and attention module. The proposed MSMRDenseCNN was pretrained by the ImageNet dataset to capture basic graphic characteristics from the images and was retrained by the collected retrospective CT images. The predictive ability of the MSMR-DenseCNN models on triphasic images was compared with a conventional radiomics model, radiological model and clinical model. Results: MSMR-DenseCNN applied to the delayed phase (DP) achieved the highest area under the curve (AUC) of 0.867 in the validation cohort for grading prediction, outperforming those on the arterial phase (AP) and portal venous phase (PVP). Fusion of the results on triphasic images did not increase the predictive ability, which underscored the role of DP for grading prediction. Compared with a single-scale and single-region network, the DP-phase based MSMR-DenseCNN model remarkably raised sensitivity from 67.4% to 75.5% with comparable specificity of 78.6%. MSMR-DenseCNN on DP defeated conventional radiomics, radiological and clinical models, where the AUCs were correspondingly 0.765, 0.695 and 0.612 in the validation cohort. Conclusions: The MSMR-DenseCNN modelling strategy increased the accuracy for preoperative prediction of grading in HCC, and enlightens similar radiological analysis pipelines in a variety of clinical scenarios in HCC management. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
41. Molybdenum induces alterations in the glycerolipidome that confer drought tolerance in wheat
- Author
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Chengxiao Hu, Songwei Wu, Xiaozhen Yang, Shuaibing Yao, Xuecheng Sun, Yuan Zhou, Xuemin Wang, and Qiling Tan
- Subjects
Molybdenum ,Phosphatidylglycerol ,chemistry.chemical_classification ,Phosphatidylethanolamine ,Physiology ,Chemistry ,Drought tolerance ,food and beverages ,Fatty acid ,Plant Science ,Oxylipin ,Photosynthesis ,Adaptation, Physiological ,Droughts ,Transcriptome ,chemistry.chemical_compound ,Biochemistry ,Stress, Physiological ,Phosphatidylcholine ,Triticum - Abstract
Molybdenum (Mo), which is an essential microelement for plant growth, plays important roles in multiple metabolic and physiological processes, including responses to drought and cold stress in wheat. Lipids also have crucial roles in plant adaptions to abiotic stresses. The aim of this study was to use glycerolipidomic and transcriptomic analyses to determine the changes in lipids induced by Mo that are associated with Mo-enhanced drought tolerance in wheat. Mo treatments increased the transcript levels of genes involved in fatty acid and glycerolipid biosynthesis and desaturation, but suppressed the expression of genes involved in oxylipin production. Wheat plants supplemented with Mo displayed higher contents of monogalactosyldiacyglycerol (MGDG), digalactosyldoacylglycerol (DGDG), phosphatidylglycerol (PG), phosphatidylethanolamine (PE), and phosphatidylcholine (PC) with increased levels of unsaturation. The levels of MGDG, DGDG, PG, and PC increased under PEG-simulated drought (PSD), and the magnitude of the responses varied in the presence and absence of Mo. Mo increased the accumulation of the most abundant glycerolipid species of C36:6, C34:4, and C34:3 by increasing the expression of genes related to desaturation under PSD, and this contributed to maintaining the fluidity of membranes. In addition, Mo attenuated the decreases in the ratios of DGDG/MGDG and PC/PE that were observed under PSD. These changes in lipids in Mo-treated wheat would contribute to maintaining the integrity of membranes and to protecting the photosynthetic apparatus, thus acting together to enhance drought tolerance.
- Published
- 2020
- Full Text
- View/download PDF
42. Genomic DNA methylation profiling indicates immune response following thermal ablation treatment for HBV-associated hepatocellular carcinoma
- Author
-
Yonghong Zhang, Caixia Hu, Honghai Zhang, Kang Li, Jianping Sun, Yanan Zhao, Jiang Long, Xiaozhen Yang, Peng Zhao, Chaoran Zang, Ning He, Qi Wang, and Yan Zhao
- Subjects
0301 basic medicine ,Hepatitis B virus ,Cancer Research ,DNA methylation ,Microarray ,Methylation ,Articles ,Cell cycle ,Biology ,medicine.disease ,medicine.disease_cause ,immune response ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Oncology ,CpG site ,030220 oncology & carcinogenesis ,Hepatocellular carcinoma ,PBMCs ,medicine ,Cancer research ,HCC ,Liver cancer - Abstract
Hepatitis B virus (HBV)-associated hepatocellular carcinoma (HCC) is the most common type of liver cancer in China. Thermal ablation is one of the main strategies for HCC treatment. However, few studies have investigated the properties of the immune response following thermal ablation thus far. In the present study, five subjects with HBV-associated HCC were recruited from The Beijing Youan Hospital. Peripheral blood mononuclear cells (PBMCs) were collected at three time points: Prior to thermal ablation (PR), 1–3 days post-ablation (P1) and 5–7 days post-ablation (P7). An Illumina 850K methylation microarray was employed to determine the DNA methylation profile of each sample. Data were analyzed using different methylation probes with the Bioconductor package in R. Following annotation of different methylation CG sites (CGs), the associated genes were subjected to an Ingenuity Pathway Analysis. A total of 3,000 significantly different CGs (adjusted P0.5) were identified within the PR, P1 and P7 time points. Of these, 744 (24.8%) sites increased between the PR and P1 time points but gradually decreased at the P7 time point. The remaining 2,256 (75.2%) sites decreased between the PR and P1 time points gradually increased at the P7 time point. Following gene annotation of different CGs on the promoter, signaling pathways analysis demonstrated that ‘p70S6K signaling’, ‘CXCR4 signaling’, ‘dendritic cell maturation’, ‘production of nitric oxide and reactive oxygen species in macrophages’ pathways were activated at the P7 time point. The present study suggested that PBMC DNA methylation had changed soon after thermal ablation for subjects with HBV-associated HCC, and systemic immune responses were activated, particularly at the P7 time point.
- Published
- 2020
43. Alkanes (C29 and C31)-Mediated Intracuticular Wax Accumulation Contributes to Melatonin- and ABA-Induced Drought Tolerance in Watermelon
- Author
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Xian Zhang, Golam Jalal Ahammed, Xing Yan, Zixing Zhang, Chunhua Wei, Hao Li, Yanliang Guo, Jianqiang Yang, Qi Cui, and Xiaozhen Yang
- Subjects
0106 biological sciences ,0301 basic medicine ,Wax ,Epidermis (botany) ,Chemistry ,fungi ,Drought tolerance ,food and beverages ,Plant physiology ,Plant Science ,Cutin ,01 natural sciences ,Melatonin ,03 medical and health sciences ,chemistry.chemical_compound ,Horticulture ,030104 developmental biology ,visual_art ,visual_art.visual_art_medium ,medicine ,Desiccation ,Agronomy and Crop Science ,Abscisic acid ,010606 plant biology & botany ,medicine.drug - Abstract
As the outermost hydrophobic layer, cuticular waxes serve as an essential waterproof barrier to protect plants from desiccation, but the mechanism of wax accumulation still remains unclear. We analyzed the response of cuticular wax composition and deposition to drought in three different watermelon germplasms, namely, M20, M08, and J5F, which showed similar stomatal response, but high, moderate, and low tolerance to drought, respectively. Among the identified 28 compounds of cuticular waxes on leaves, more alkanes with chain lengths of C29 and C31 were induced in M20, accompanied by an increased transcript levels of CER1 (very-long-chain aldehyde decarbonylase 1), when compared to that in M08 and J5F. M20 showed higher total wax amount but fewer platelet-like wax crystals on the upper epidermis of leaves under drought, suggesting the prevalence of more intracuticular waxes embedded into the cutin matrix as fillers. These distinct responses of cuticular waxes in M20 conferred low water loss and high tolerance to drought. Melatonin and abscisic acid (ABA), which can be induced by drought, promoted the biosynthesis of alkanes (C29 and C31) but inhibited the accumulation of wax crystals under drought. Moreover, melatonin inhibited the elevation of ABA levels under mild drought but promoted the ABA accumulation under severe drought, indicating that melatonin and ABA function synergistically to regulate wax compositions to limit non-stomatal water loss under severe but not mild drought in watermelon. These findings can be exploited to improve crop tolerance to drought in arid regions.
- Published
- 2020
- Full Text
- View/download PDF
44. Glyphosate-based herbicide causes spermatogenesis disorder and spermatozoa damage of the Chinese mitten crab (Eriocheir sinensis) by affecting testes characteristic enzymes, antioxidant capacities and inducing apoptosis
- Author
-
Xiaozhen Yang, Xiaowen Yu, Ningbo Sun, Xingliang Shi, Chao Niu, Aoya Shi, and Yongxu Cheng
- Subjects
Pharmacology ,Male ,China ,Herbicides ,Testis ,Glycine ,Animals ,Apoptosis ,RNA, Messenger ,Toxicology ,Spermatogenesis ,Spermatozoa ,Antioxidants - Abstract
Glyphosate-based herbicide (GBH) is a popular herbicide, which may contaminate the water environment and affect aquatic animals. In this study, testes morphology, physiology function, apoptosis pathway, and spermatozoa quality of Chinese mitten crab (Eriocheir sinensis) were evaluated after 7 days of GBH exposure (48.945 mg/l,1/2 of the 96 h LC
- Published
- 2022
45. Designing Topological Defect Lines Protected by Gauge-dependent Symmetry Indicators
- Author
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Erda Wen, Dia’aaldin J. Bisharat, Robert J. Davis, Xiaozhen Yang, and Daniel F. Sievenpiper
- Subjects
Condensed Matter - Mesoscale and Nanoscale Physics ,Mesoscale and Nanoscale Physics (cond-mat.mes-hall) ,General Physics and Astronomy ,FOS: Physical sciences ,Physics - Applied Physics ,Applied Physics (physics.app-ph) ,Physics - Optics ,Optics (physics.optics) - Abstract
Symmetry indicators are a modern tool for characterizing topological phases that require only minimal computational expense but provide an elegant means of designing practical devices. This paper demonstrates how a rotational symmetry indicator can be used to construct and characterize a topologically robust waveguide, which is then verified experimentally on a printed circuit board (PCB) platform. The design takes advantage of the real-space gauge-dependency of the symmetry indicators and adopts a $C_6$ lattice with simple shifts, forming a defect line supporting topological edge modes. It is shown that the modes can realize the same features as previous topological waveguides, but in addition possesses a greater degree of reconfigurability and the unique ability to form a one-way termination. Moreover, the design illustrates the critical role real space information plays in determining the topological properties of photonic crystals, enabling a wider range of possible realizations.
- Published
- 2022
- Full Text
- View/download PDF
46. Predicting hepatocellular carcinoma early recurrence after ablation based on magnetic resonance imaging radiomics nomogram
- Author
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Xiaozhen, Yang, Chunwang, Yuan, Yinghua, Zhang, Kang, Li, and Zhenchang, Wang
- Subjects
Nomograms ,Carcinoma, Hepatocellular ,ROC Curve ,Liver Neoplasms ,Humans ,General Medicine ,Magnetic Resonance Imaging ,Retrospective Studies - Abstract
The aim of this study is to investigate a model for predicting the early recurrence of hepatocellular carcinoma (HCC) after ablation.A total of 181 patients with HCC after ablation (train group was 119 cases; validation group was 62 cases) were enrolled. The cases of early recurrence in the set of train and validation were 63 and 31, respectively. Radiomics features were extracted from the enhanced magnetic resonance imaging scanning, including pre-contrast injection, arterial phase, late arterial phase, portal venous phase, and delayed phase. The least absolute shrinkage and selection operator cox proportional hazards regression after univariate and multivariate analysis was used to screen radiomics features and build integrated models. The nomograms predicting recurrence and survival of patients of HCC after ablation were established based on the clinical, imaging, and radiomics features. The area under the curve (AUC) of the receiver operating characteristic curve and C-index for the train and validation group was used to evaluate model efficacy.Four radiomics features were selected out of 34 texture features to formulate the rad-score. Multivariate analyses suggested that the rad-score, number of lesions, integrity of the capsule, pathological type, and alpha-fetoprotein were independent influencing factors. The AUC of predicting early recurrence at 1, 2, and 3 years in the train group was 0.79 (95% CI: 0.72-0.88), 0.72 (95% CI: 0.63-0.82), and 0.71 (95% CI: 0.61-0.83), respectively. The AUC of predicting early recurrence at 1, 2, and 3 years in the validation group was 0.72 (95% CI: 0.58-0.84), 0.61 (95% CI: 0.45-0.78) and 0.64 (95% CI: 0.40-0.87).The model for early recurrence of HCC after ablation based on the clinical, imaging, and radiomics features presented good predictive performance. This may facilitate the early treatment of patients.
- Published
- 2022
- Full Text
- View/download PDF
47. 5-HT2B, 5-HT7, and DA2 Receptors Mediate the Effects of 5-HT and DA on Agonistic Behavior of the Chinese Mitten Crab (Eriocheir sinensis)
- Author
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Yongxu Cheng, Yameng Song, Long Zhang, Xiaozhe Song, Long He, Cong Zhang, Xiaozhen Yang, Jia-Huan Lv, and Yangyang Pang
- Subjects
Agonist ,medicine.medical_specialty ,Ketanserin ,Physiology ,medicine.drug_class ,Cognitive Neuroscience ,Biochemistry ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,medicine ,Agonistic behaviour ,Receptor ,5-HT receptor ,030304 developmental biology ,Chinese mitten crab ,0303 health sciences ,biology ,Chemistry ,Cell Biology ,General Medicine ,biology.organism_classification ,Eriocheir ,Endocrinology ,Serotonin ,030217 neurology & neurosurgery ,medicine.drug - Abstract
The Chinese mitten crab (Eriocheir sinensis) is a commercially important crab in China and is usually managed at high stocking densities. Agonistic behavior directly impacts crab integrity, survival, and growth and results in economic losses. In the present study, we evaluated the modulatory effects of serotonin (5-HT) and dopamine (DA) though the 5-HT2 and DA2 receptor-cyclic adenosine monophosphate (cAMP)-protein kinase A (PKA) pathway on agonistic behavior. The results showed that injection of either 10-6 mol/crab 5-HT or DA reduced the agonistic behavior of E. sinensis (P < 0.05), as did 10-10 mol/crab DA and 10-8 mol/crab 5-HT and DA (P < 0.05); however, a dose of 10-10 mol/crab 5-HT promoted agonistic behavior. 5-HT significantly increased the mRNA expression level of 5-HT7 receptor and reduced that of the DA2 receptor in the cerebral ganglion (P < 0.05). In contrast to 5-HT, DA significantly decreased 5-HT2B mRNA levels and increased 5-HT7 and DA2 receptor levels in the thoracic ganglia (P < 0.05). In addition, injections of either 5-HT or DA increased the cAMP and PKA levels in hemolymph (P < 0.05). By using in vitro culture of the thoracic ganglia, the current study showed that ketanserin (5-HT2 antagonist) and [R(-)-TNPA] (DA2 agonist) had obvious effects on the expression levels of the two receptors (P < 0.05). In vivo experiments further demonstrated that ketanserin and [R(-)-TNPA] could both significantly reduce the agonistic behavior of the crabs (P < 0.05). Furthermore, both ketanserin and [R(-)-TNPA] promoted the cAMP and PKA levels (P < 0.05). The injection of CPT-cAMP (cAMP analogue) elevated the PKA levels and inhibited agonistic behavior. In summary, this study showed that 5HT-2B and DA2 receptors were involved in the agonistic behavior that 5-HT/DA induced through the cAMP-PKA pathway in E. sinensis.
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- 2019
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48. The protective effects of melatonin on oxidative damage and the immune system of the Chinese mitten crab (Eriocheir sinensis) exposed to deltamethrin
- Author
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Xiaozhe Song, Yongxu Cheng, Qian Zhang, Cong Zhang, Jiang Wang, Xiaozhen Yang, Jia-Huan Lv, Nan Zhou, Yangyang Pang, Long He, and Yameng Song
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Insecticides ,medicine.medical_specialty ,Environmental Engineering ,010504 meteorology & atmospheric sciences ,Brachyura ,Acid Phosphatase ,Respiratory chain ,Hepatopancreas ,010501 environmental sciences ,Protective Agents ,medicine.disease_cause ,01 natural sciences ,Superoxide dismutase ,chemistry.chemical_compound ,Internal medicine ,Nitriles ,Pyrethrins ,Toxicity Tests ,medicine ,Animals ,Environmental Chemistry ,Aspartate Aminotransferases ,Waste Management and Disposal ,Cell damage ,Melatonin ,0105 earth and related environmental sciences ,chemistry.chemical_classification ,Reactive oxygen species ,biology ,Alanine Transaminase ,Glutathione ,Alkaline Phosphatase ,Malondialdehyde ,medicine.disease ,biology.organism_classification ,Pollution ,Mitochondria ,Oxidative Stress ,Endocrinology ,chemistry ,Immune System ,biology.protein ,Reactive Oxygen Species ,Oxidative stress - Abstract
Deltamethrin (Del), an important broad-spectrum insecticide, is widely used in agricultural activities. However, Del is an effective reactive oxygen species (ROS) inducer that induces oxidative stress damage in cells or tissues. Del is significantly more toxic to aquatic organisms, especially crustaceans, than to mammals and birds. This study was designed to evaluate the protective effect of melatonin (MT) on the toxicity-induced damage of Del after 6 h in Eriocheir sinensis. The results showed that Del exposure significantly induced oxidative damage in the hepatopancreas and mitochondria, with malondialdehyde (MDA) and glutathione (GSH) levels being significantly increased and superoxide dismutase (SOD) activity being significantly decreased. Moreover, Del exposure significantly induced functional damage of the hepatopancreas and mitochondria, with a significant increase in alanine aminotransferase (ALT), aspartate aminotransferase (AST), acid phosphatase (ACP) and alkaline phosphatase (AKP) activities in the hepatopancreas and the ratio of albumin/globulin (ALB/GLB) in serum, which indicated the permeability and integrity of the membranes were damaged and had caused cell damage. In addition, ATP content, Na+-K+-ATPase activity and cytochrome C (Cyt‑C) content in mitochondria decreased significantly, which indicated that Del exposure destroyed the normal respiratory chain of mitochondria. We also evaluated the hematological parameters. Although there were no significant differences in total hemocyte count (THC) levels, hemocyte apoptosis was significantly induced by Del exposure, and the hemocyte phagocytic activity and the hemocyanin levels decreased significantly with Del exposure. However, MT pretreatment not only prevented oxidative damage and functional damage caused by Del exposure to the hepatopancreas and mitochondria, but it also restored the hemocyte apoptotic rate and phagocytic activity to normal levels. In short, Del exposure caused significant oxidative and functional damage to the hepatopancreas, mitochondria and hemocytes of E. sinensis, whereas the use of MT almost completely eliminated the damage caused by Del exposure.
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- 2019
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49. Transcriptomic and physiological analyses reveal drought adaptation strategies in drought-tolerant and -susceptible watermelon genotypes
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Yanling Mo, Xian Zhang, Qi Cui, Jianqiang Yang, Yanliang Guo, Jianxiang Ma, Chunhua Wei, Xiaozhen Yang, Yong Zhang, and Hao Li
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Chlorophyll ,0106 biological sciences ,0301 basic medicine ,Genotype ,Proline ,Cell Respiration ,Drought tolerance ,Adaptation, Biological ,Ascorbic Acid ,Plant Science ,Biology ,Photosynthesis ,01 natural sciences ,Citrullus ,Melatonin ,Transcriptome ,03 medical and health sciences ,Plant Growth Regulators ,Stress, Physiological ,Genetics ,medicine ,Plant Proteins ,Gene Expression Profiling ,fungi ,Water ,food and beverages ,General Medicine ,Adaptation strategies ,Glutathione ,Droughts ,Horticulture ,030104 developmental biology ,Osmoprotectant ,Agronomy and Crop Science ,Function (biology) ,010606 plant biology & botany ,medicine.drug - Abstract
Drought stress has become one of the most urgent environmental hazards for horticultural crops. In this research, we analyzed watermelon adaptation strategies to drought stress in drought-tolerant (M20) and -susceptible (Y34) genotypes via transcriptomic and physiological analyses. After drought stress, a total of 6228 and 4311 differentially expressed genes (DEGs) were observed in Y34 and M20, respectively. Numerous DEGs were involved in various defense responses such as antioxidation, protein protection, osmotic adjustment, wax accumulation, hormone signaling, and melatonin biosynthesis. Accordingly, the contents of ABA, melatonin, wax, and some osmoprotectants were increased by drought stress in both Y34 and especially M20. Exogenous application of melatonin or ABA induced wax accumulation and drought tolerance and melatonin may function upstream of ABA. In comparison to Y34, M20 was more able to activate ABA signaling, melatonin biosynthesis, osmotic adjustment, antioxidation, and wax accumulation under drought stress. These stronger responses confer M20 tolerance to drought. Photosynthesis and most DEGs involved in photosynthesis and cell growth were decreased by drought stress in both M20 and especially Y34. For drought-susceptible genotypes, growth retardation may be an important mechanism for saving and redistributing resources in order to reprogram stress signaling networks.
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- 2019
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50. Magnetic resonance radiomics signatures for predicting poorly differentiated hepatocellular carcinoma
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Yinghua Zhang, Xiaozhen Yang, Zhenchang Wang, and Chunwang Yuan
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Adult ,Male ,medicine.medical_specialty ,Carcinoma, Hepatocellular ,03 medical and health sciences ,DICOM ,0302 clinical medicine ,Radiomics ,Lasso regression ,Poorly Differentiated Hepatocellular Carcinoma ,Image Interpretation, Computer-Assisted ,Quality Improvement Study ,Medicine ,Humans ,magnetic resonance imaging ,030212 general & internal medicine ,Aged ,Retrospective Studies ,Aged, 80 and over ,medicine.diagnostic_test ,Receiver operating characteristic ,business.industry ,Liver Neoplasms ,Reproducibility of Results ,Magnetic resonance imaging ,Retrospective cohort study ,General Medicine ,hepatocellular carcinoma ,low differentiation ,Middle Aged ,030220 oncology & carcinogenesis ,Mann–Whitney U test ,radiomic signature ,Female ,Radiology ,business ,Research Article - Abstract
Radiomics contributes to the extraction of undetectable features with the naked eye from high-throughput quantitative images. In this study, 2 predictive models were constructed, which allowed recognition of poorly differentiated hepatocellular carcinoma (HCC). In addition, the effectiveness of the as-constructed signature was investigated in HCC patients. A retrospective study involving 188 patients (age, 29–85 years) enrolled from November 2010 to April 2018 was carried out. All patients were divided randomly into 2 cohorts, namely, the training cohort (n = 141) and the validation cohort (n = 47). The MRI images (DICOM) were collected from PACS before ablation; in addition, the radiomics features were extracted from the 3D tumor area on T1-weighted imaging (T1WI) scans, T2-weighted imaging (T2WI) scans, arterial images, portal images and delayed phase images. In total, 200 radiomics features were extracted. t test and Mann–Whitney U test were performed to exclude some radiomics signatures. Afterwards, a radiomics signature model was built through LASSO regression by RStudio Software. We constructed 2 support vector machine (SVM)-based models: 1 with a radiomics signature only (model 1) and 1 that integrated clinical and radiomics signatures (model 2). Then, the diagnostic performance of the radiomics signature was evaluated through receiver operating characteristic (ROC) analysis. The classification accuracy in the training and validation cohorts was 80.9% and 72.3%, respectively, for model 1. In the training cohort, the area under the ROC curve (AUC) was 0.623, while it was 0.576 in the validation cohort. The classification accuracy in the training and validation cohorts were 79.4% and 74.5%, respectively, for model 2. In the training cohort, the AUC was 0.721, while it was 0.681 in the validation cohort. The MRI-based radiomics signature and clinical model can distinguish HCC patients that belong in a low differentiation group from other patients, which helps in the performance of personal medical protocols.
- Published
- 2021
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