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To solve the problem of serious pollution and dust accumulation under the traditional mixed ventilation of the fully mechanized excavation face, the idea of using the air flow control device of the air outlet and the jet air curtain of the exhaust outlet to optimize the dust field is proposed. Taking the fully mechanized excavation face of a mine in northern Shaanxi as the research object, a finite element model of the airflow-dust gas-solid coupling field was established, and the influence of the diameter and right angle of the air flow control device and the width, speed and opening angle of the air curtain outlet on the dust field was analyzed, and orthogonal experiments were designed to determine the best comprehensive control scheme. The results show that under the ventilation system of the fully mechanized excavation face, when the diameter of the control device is 1.2 m, the right deviation angle of the control device is 9°, the width of the air curtain outlet is 0.14 m, the speed of the air curtain outlet is 7 m/s, and the angle of the air curtain outlet is 60°, the dust mass concentration at the driver’s position and the average dust mass concentration at the height of the pedestrian breathing belt are reduced by 91.7% and 74.9%, respectively, and the test error is less than 10%, effectively improving the ventilation environment.

Abstract Background Nurses often face challenges such as inadequate welfare protection, injustice, and workplace adversity including violence, bullying, and sexual harassment. In this context, providing sufficient support to nurses is crucial for the promotion of their professional well-being. This study examines the direct and indirect effects of perceived organizational support on nurses’ well-being, particularly highlighting the mediating roles of professional quality of life and the perception of decent work. Methods A cross-sectional survey design was employed in this study. Convenience sampling was used to survey 792 nurses from five tertiary A-grade hospitals in Shanxi Province in January 2024. Data collection tools included a custom demographic survey, the Perceived Organizational Support Scale, Professional Quality of Life Scale, Decent Work Perception Scale, and Nurse Occupational Well-being Questionnaire. Descriptive statistics, correlation analysis, and mediation effect analyses were performed. Results The findings demonstrate that perceived organizational support has a direct impact on nurses’ occupational well-being (β = 0.323, p

Recombinant Muscovy duck parvovirus (rMDPV) is a product of genetic recombination between classical Muscovy duck parvovirus (MDPV) and goose parvovirus (GPV). The recombination event took place within a 1.1-kb DNA segment located in the middle of the VP3 gene, and a 187-bp sequence extending from the P9 promoter to the 5′ initiation region of the Rep1 ORF. This resulted in the alteration of five amino acids within VP3. Despite these genetic changes, the precise influence of recombination and amino acid mutations on the pathogenicity of rMDPV remains ambiguous. In this study, based on the rMDPV strain ZW and the classical MDPV strain YY, three chimeric viruses (rZW-mP9, rZW-mPR187, and rYY-rVP3) and the five amino acid mutations-introduced mutants (rZW-g5aa and rYY-5aa(ZW)) were generated using reverse genetic technology. When compared to the parental virus rZW, rZW-g5aa exhibited a prolonged mean death time (MDT) and a decreased median lethal dose (ELD50) in embryonated duck eggs. In contrast, rYY-5aa(ZW) did not display significant differences in MDT and ELD50 compared to rYY. In 2-day-old Muscovy ducklings, infection with rZW-g5aa and rYY-5aa(ZW) resulted in mortality rates of only 20% and 10%, respectively, while infections with the three chimeric viruses (rZW-mP9, rZW-mPR187, rYY-rVP3) and rZW still led to 100% mortality. Notably, rYY-rVP3, containing the VP3 region from strain ZW, exhibited 50% mortality in 6-day-old Muscovy ducklings and demonstrated significant horizontal transmission. Collectively, our findings indicate that recombination and consequent amino acid changes in VP3 have a synergistic impact on the heightened virulence of rMDPV in Muscovy ducklings.

This study employs a hybrid numerical-experimental calibration method based on phenomena to determine the fracture parameters of the Modified Mohr–Coulomb (MMC) model. Using a self-developed VUMAT subroutine and the element deletion technique, the fracture process of a wide plate pipeline is thoroughly analyzed. This study investigates the impact of various crack shapes on the fracture response under tensile loading and the influence of surface crack size on the initiation location of a wide plate. These results demonstrate the calibrated MMC fracture model’s accurate prediction of the toughness fracture behavior of X80 pipeline steel. Under equal area conditions of the dangerous section, circular cracks exhibit lower bearing capacity compared to elliptical cracks. Elliptical cracks predominantly propagate in the thickness direction, whereas circular cracks show nearly uniform growth in all directions. Furthermore, when the crack depth is less than half of the wall thickness, the damage accumulation value at the midpoint of the crack front is maximized; conversely, when the crack front is closer to the internal measurement point of the wide plate, the damage accumulation value is maximized.

Abstract Background The turnover intention (TI) of nurses is common, posing a threat to modern healthcare organizations. Psychological contract (PC) is a predictor of TI, affecting significantly nurse’s TI. However, the extent of the association between PC and nurse’s TI is unknown. We performed a meta-analysis to quantitatively analyze the relationship between PC and nurse’s TI. Methods We searched nine electronic databases from inception to July 2023. Observational studies were included using a retrieval strategy related to PC and TI. Meta-analyses of common effect and random effect models were performed using R software with Spearman or Pearson correlation coefficients. Meta-regression, subgroup analysis, publication bias, and sensitivity analysis were also carried out . Results Eighteen studies including 8,908 nurses were identified. Based on various PC-related perspectives, 16 studies explored nurses’ TI in terms of the content and three-dimensional structure of PC. Of these, 9 studies reported the negative direction of the correlation between PC and TI (r ranged from − 0.20 to -0.45), whereas 7 studies reported the positive direction of the correlation between PC and TI (r ranged from 0.32 to 0.50). The PC total and its dimensions were found to have moderately significant associations with TI, with the exception of the PCE and PCE-I. Additional, 2 studies reported the relationship between the outcome of PC and TI, the PCF, PCB, and PCV were powerful predictors of nurses’ TI. Meta-regression and subgroup analysis found that only nurses working in specialized departments might be the source of heterogeneity. Conclusions To our knowledge, this was the first meta-analysis to quantitatively examine the relationship between PC and TI among nurses. The findings reaffirmed the necessity for healthcare administrators and the medical profession to valued nurse’ good interpersonal, social support, humanistic environment, and meet nurses’ psychological and spiritual needs in addition to their material demands. Moderators of the connection between PC and TI, based on meta-regression and subgroup analyses, should be carefully explored as they may aid in identifying nurses’ TI. Additional, longitudinal research, as well as mixed research, should be conducted to more comprehensively explore the relationship between PC and TI.

BackgroundThe World Health Organization recommends regular hand hygiene monitoring and feedback to improve hand hygiene behaviors and health care–associated infection rates. Intelligent technologies for hand hygiene are increasingly being developed as alternative or supplemental monitoring approaches. However, there is insufficient evidence regarding the effect of this type of intervention, with conflicting results in the literature. ObjectiveWe conduct a systematic review and meta-analysis to evaluate the effects of using intelligent technology for hand hygiene in hospitals. MethodsWe searched 7 databases from inception to December 31, 2022. Two reviewers independently and blindly selected studies, extracted data, and assessed the risk of bias. A meta-analysis was performed using the RevMan 5.3 and STATA 15.1 software. Sensitivity and subgroup analyses were also conducted. Overall certainty of evidence was appraised using the Grading of Recommendations Assessment, Development, and Evaluation approach. The systematic review protocol was registered. ResultsThe 36 studies comprised 2 randomized controlled trials and 34 quasi-experimental studies. The included intelligent technologies involved 5 functions: performance reminders，electronic counting and remote monitoring，data processing，feedback，and education. Compared with usual care, the intelligent technology intervention for hand hygiene improved health care workers’ hand hygiene compliance (risk ratio 1.56, 95% CI 1.47-1.66; P

Accumulation of gas and dust in excavation work is a safety risk that remains to be solved. A substantial amount of gas and dust accumulate in fully mechanized heading face outlets, and the press-in tube jet cannot be adjusted dynamically based on the actual physical conditions. To solve the problem, a dynamic data-driven method for optimising gas and dust distribution by regulating the wind field is proposed. This method is based on the immune genetic algorithm and uses dynamic data as the incremental data with the historical data from the mine regulation rules to obtain the optimal incremental regulation rules (IRRs) for the wind field. The experiment was performed in Ningtiaota coal mine, Yulin city, northern Shaanxi, China. The observed wind velocity and gas concentrations were within the specification range when regulated by IRRs. The dust concentrations at the position of the driver and the average concentrations on the return air side decreased by 64.6 % and 56.5 %, respectively, when the outlet was 5 m from the head-on. When the distance of the outlet from the head-on was 10 m, the dust concentrations at the position of the driver and the average concentrations on the return air side dropped by 42.9 % and 68.6 %, respectively. The results from this study provide measures that would improve safety and efficiency during excavation of fully mechanized heading faces.

It is essential to quantify the rate of root water uptake (RWU) and characterize the variability of RWU, which benefits understanding the water use of alpine meadows and its response to environmental changes. In addition, model simulation is one of the feasible methods to obtain the RWU characteristics of alpine meadows. However, recent research on RWU models mainly focused on crops and trees, while barely on alpine meadows. Thus, it is of great significance to develop an RWU model applicable to alpine meadows, which can describe local plant water consumption processes. In this paper, we measured the distribution characteristics of root density and soil characteristics of alpine meadows in the Qinghai-Tibet Plateau (QTP) with prototype observation experiments. The root length density (RLD) of the wilting stage decreased by 16.2% on average compared to the re-greening stage, and the ability of root growth was poorer in the high altitude area. Based on the distribution characteristics of root length density (RLD) and the three soil resistance indexes (soil water potential, soil hydraulic diffusivity, and soil hydraulic conductivity), which have obvious impacts on RWU. The improved Feddes model, Selim-Iskandar model, and Molz-Remson model were selected to simulate the RWU in alpine meadows, which fully considered the above impact factors, but the applicability in alpine meadows was not discussed. The results showed that the model performance of the Selim-Iskandar model was better than the improved Feddes model and Molz-Remson model, and its simulation performance was improved by 44.76 and 22.16% compared to the improved Feddes model and Molz-Remson model, respectively. Based on the quantified RWU rate, the RWU characteristics showed that the top 50% of the rhizosphere was responsible for 72.65% of the water uptake of the entire rhizosphere. At the same time, the obvious difference in RWU rate in different phenological stages was obvious, showing that the RWU rate in the re-greening stage increased by 36.52% compared to that in the wilting stage. This study can provide technical support for a more accurate estimation of transpiration and water use efficiency in alpine meadows, and could provide theoretical support for the implementation of vegetation.

This study evaluates the phenolic profile as well as the antioxidant properties of Shennongjia Apis cerana honey through a comparison with Apis mellifera honey in China. The total phenolic content (TPC) ranges from 263 ± 2 to 681 ± 36 mg gallic acid/kg. The total flavonoids content (TFC) ranges from 35.9 ± 0.4 to 102.2 ± 0.8 mg epicatechin/kg. The correlations between TPC or TFC and the antioxidant results (FRAP, DPPH, and ABTS) were found to be statistically significant (p < 0.01). Furthermore, the phenolic compounds are quantified and qualified by high performance liquid chromatography-high resolution mass spectrometry (HPLC-HRMS), and a total of 83 phenolic compounds were tentatively identified in this study. A metabolomics analysis based on the 83 polyphenols was carried out and subjected to principal component analysis and orthogonal partial least squares-discriminant analysis. The results showed that it was possible to distinguish Apis cerana honey from Apis mellifera honey based on the phenolic profile.

Concentric gravity waves (CGWs) in the middle and upper atmosphere show wave-coupling processes between the lower atmosphere and the middle and upper atmosphere. In this research, we analyzed a case of CGWs detected simultaneously by the AIRS (Atmospheric Infrared Sounder) and the VIIRS/DNB (Day/Night Band of the Visible Infrared Imager Radiometer Suite) in the stratosphere and mesosphere. Results showed that gravity waves (GWs) were generated by the collocated Hurricane Bejisa on the island of Mauritius. The AIRS data showed arc-like phase fronts of GWs with horizontal wavelengths of 190 and 150 km at 21:08 coordinated universal time (UTC) on 1 January 2014 and at 10:00 UTC on 2 January 2014, whereas the DNB observed arced GWs with horizontal wavelengths of 60 and 150 km in the same geographic regions at 22:24 UTC. The characteristics of CGW parameters in the stratosphere (~40 km) and the mesosphere (~87 km), such as the vertical wavelength, intrinsic frequency, and intrinsic horizontal phase speed, were first derived together with the background winds from ERA5 reanalysis data and Horizontal Wind Model data through the dispersion relationship of GWs and the wind-filtering theory.

Study region: The Nagqu River Basin in the central part of the Qinghai–Tibet Plateau, China. Study focus: Groundwater flow systems in permafrost regions are characterized by a unique circulation. Understanding the groundwater circulation mechanism is essential for studying the hydrological effect of permafrost degradation in alpine regions. In this study, potential water sources and origin of solutes in the groundwater of a typical alpine region were studied using hydrochemistry, 18O, 2H and 3H analyses. This research is essential for studying the hydrological effects of permafrost degradation. New hydrological insights for the region: Upon moving from the mountainous region to the plains, the renewal rate decreases from 10.5% to 0.6% and the mean transit time increases from 5–30 to 20–32 years. Groundwater is mainly recharged by ground ice meltwater and infiltration of glacier meltwater, snow meltwater and precipitation in mountainous areas, and by deep groundwater near faults. Discharge to surface water, evaporation, and overflow into springs are the main drainage modes. Water/ice–rock/soil interactions, such as dissolution of aluminosilicate minerals, are the main factors affecting the hydrochemical evolution. This study provides a data-driven approach for understanding groundwater recharge and evolution in similar systems.

Objective Secondary infection, especially bloodstream infection, is an important cause of death in critically ill patients with COVID-19. We aimed to describe secondary bloodstream infection (SBI) in critically ill adults with COVID-19 in the intensive care unit (ICU) and to explore risk factors related to SBI. Methods We reviewed all SBI cases among critically ill patients with COVID-19 from 12 February 2020 to 24 March 2020 in the COVID-19 ICU of Jingmen First People's Hospital. We compared risk factors associated with bloodstream infection in this study. All SBIs were confirmed by blood culture. Results We identified five cases of SBI among the 32 patients: three with Enterococcus faecium , one mixed septicemia ( E. faecium and Candida albicans ), and one C. parapsilosis . There were no significant differences between the SBI group and non-SBI group. Significant risk factors for SBI were extracorporeal membrane oxygenation, central venous catheter, indwelling urethral catheter, and nasogastric tube. Conclusions Our findings confirmed that the incidence of secondary infection, particularly SBI, and mortality are high among critically ill patients with COVID-19. We showed that long-term hospitalization and invasive procedures such as tracheotomy, central venous catheter, indwelling urethral catheter, and nasogastric tube are risk factors for SBI and other complications.

ObjectiveTo investigate the correlation between serum immunoglobulin E (IgE) levels and the complications in children with Mycoplasma pneumoniae pneumonia (MPP).MethodsA retrospective study of MPP patients hospitalized from May 2019 to July 2021 was performed. We analyzed the clinical manifestations, complications, laboratory findings, and treatments.ResultsA total of 275 patients who met the inclusion criteria were enrolled in the study. We divided patients into two groups based on whether there were complications. Complications occurred in 147 patients, of which pulmonary complications were more common than extrapulmonary complications. The IgE level in the complication group was higher than that in the non-complication group with p = 0.041. Patients with complications of necrotizing pneumonitis, pneumothorax, skin rash, or bronchiolitis obliterans had higher IgE levels. There was no statistically significant difference in IgE levels between pulmonary complications and extrapulmonary complications. The older the age, the greater the probability of complications (p = 0.001). The group with complications was more likely to have chest pain (p = 0.000), while the group without complications was more likely to have wheezing (p = 0.017). The use of bronchoscopy and glucocorticoids was higher in the complication group than in the non-complication group (p = 0.000).ConclusionsMPP patients with higher IgE levels had more severe clinical symptoms and complications. We speculated that IgE might be a biomarker for complications after MP infection.

Background: Most cystic fibrosis is caused by mutations in the cystic fibrosis transmembrane conductance regulator (CFTR) gene that lead to protein misfolding and degradation by the ubiquitin–proteasome system. Previous studies demonstrated that PIAS4 facilitates the modification of wild-type (WT) and F508del CFTR by small ubiquitin-like modifier (SUMO)-1, enhancing CFTR biogenesis by slowing immature CFTR degradation and producing increased immature CFTR band B.Methods: We evaluated two correction strategies using misfolding mutants, including the common variant, F508del. We examined the effects on mutant expression of co-expression with PIAS4 (E3 SUMO ligase), and/or the corrector, C18. To study the impact of these correction conditions, we transfected CFBE410- cells, a bronchial epithelial cell line, with a CFTR mutant plus: (1) empty vector, (2) empty vector plus overnight 5 μM C18, (3) PIAS4, and (4) PIAS4 plus C18. We assessed expression at steady state by immunoblot of CFTR band B, and if present, band C, and the corresponding C:B band ratio. The large PIAS4-induced increase in band B expression allowed us to ask whether C18 could act on the now abundant immature protein to enhance correction above the control level, as reported by the C:B ratio.Results: The data fell into three mutant CFTR categories as follows: (1) intransigent: no observable band C under any condition (i.e., C:B = 0); (2) throughput responsive: a C:B ratio less than control, but suggesting that the increased band C resulted from PIAS4-induced increases in band B production; and (3) folding responsive: a C:B ratio greater than control, reflecting C18-induced folding greater than that expected from increased throughput due to the PIAS4-induced band B level.Conclusion: These results suggest that the immature forms of CFTR folding intermediates occupy different loci within the energetic/kinetic folding landscape of CFTR. The evaluation of their properties could assist in the development of correctors that can target the more difficult-to-fold mutant conformations that occupy different sites within the CFTR folding pathway.

Rice bean (Vigna umbellata) is consumed as a common vegetable in Southeast Asia. Methyl jasmonate (MeJA) functions as an endogenous/exogenous stress signal to elicit the production of specific metabolites during sprouting. To elucidate the changes in metabolites and the effects of MeJA on rice bean sprouting, non-targeted ultra-performance liquid chromatography-quadrupole-time of flight mass spectrometry along with principal component analysis and supervised orthogonal projection to latent structure-discriminant analysis was performed to analyze the dissimilar profiles among the sprouts at different stages. Analysis of the abundance of biomarkers, such as sugars, free fatty acids, amino acids, flavonoids, benzoic acid derivatives, triglycerides, and lipids, showed the main effects of MeJA involved in the significant metabolite pathways. Our study elucidated the changes in rice bean composition and metabolites associated with various stages of sprouting and the roles of MeJA in sprout physiology. Our results can help improve this economically important grain crop.

Study region: The Nagqu River watershed (NRW) on the Qinghai–Tibet Plateau (QTP). Study focus: Precipitation, snowmelt, streamflow, and groundwater samples were collected in the NRW and used to analyze the contribution of different water sources to streamflow during different freeze–thaw periods. Stable isotopes of hydrogen (D) and oxygen (18O) and water chemistry were analyzed for the period ranging from 2016 to 2019, and tritium (T) and carbon-14 (14C) isotopes were analyzed for 2019. New hydrological insights for the region: Rain and snowmelt were found to reflect the chemical characteristics of precipitation, and the primary ions in both water types were Ca2+ and SO42−. The δD and δ18O isotope values of rain and snowmelt were relatively low during the entire thaw period (from June to October) and relatively high in the entire frozen period (from November to May). The results of the optimum multiparameter and mass balance analyses showed that groundwater and snowmelt accounted for approximately 39.8 % and 32.2 % to the Nagqu River water flow, respectively, whereas precipitation accounted for approximately 28.0 %. The groundwater in clastic rock fissures around the northern Cuona Lake, and permafrost and ground ice in the bedrock layer were identified as older water types with relatively low infiltration rates, and bedrock fissures in the southeastern and southwestern areas contained younger water with better recoverability.

Study region: The Nagqu River Watershed in the Qinghai–Tibet Plateau. Study focus: A computational unit is the basic spatial unit employed in distributed hydrological models (DHMs), which combines the spatiotemporal distributions of meteorological variables and physical parameters denoted within a region to reveal the characteristics affecting the water cycle of watersheds. However, the current methods developed for spatially divided regions into computational units fail to consider the physical meaning and impact of climate change in montane altitudinal zones (MAZs), which significantly affects alpine watersheds. This study proposes a method for assigning the computational units of alpine DHMs according to one-period MAZ that explicitly account for physical meaning and climate change. New hydrological insights for the region: The benefits of the proposed altitudinal discretization method are verified by applying it to construct a DHM based on the water and energy transfer processes in large river basins (WEP-L) models. The results obtained using the WEP-L, SWAT model and the new regional division method (denoted as the WEP-C model) that applies the proposed altitudinal discretization method are compared. The results demonstrate that the simulation accuracy of the daily and monthly streamflows and daily soil moisture from the alpine watershed is improved by the use of the proposed altitudinal discretization method, which provide guidance for further DHM development and can be applied to other hydrological models.

The data from a total of 200 children with suspected influenza virus infection were assessed at the febrile clinic of Women and Children’s hospital in Ganzhou of Jiangxi province from January 2018 to March 2019, and the patients were belonged to two groups (peramivir treatment group and oseltamivir treatment group). At the same time, 100 patients without special treatment were evaluated as the control group. We observed the patients’ fever relief time, pharyngeal pain relief time, nasal congestion relief time, runny nose symptoms relief time, days of hospitalization, days of medication, cost of medication, and adverse reactions in the three groups. We analyzed and compared the efficacy and adverse reactions of peramivir and oseltamivir in the treatment of children suspected with influenza. The recovery of body temperature, relief of cough, days of medication, and hospitalization period in the peramivir group were significantly shorter compared to the oseltamivir and control groups. The mean times to alleviation of fever in the three groups were 18.28 ± 17.74 h (peramivir group), 48.20 ± 34.28 h (oseltamivir group), and 72.56 ± 25.78 h (control group). The mean times to alleviation of cough in the three groups were 49.77 ± 27.58 h (peramivir group), 68.53 ± 32.54 h (oseltamivir group), and 59.38 ± 31.26 (control group). The cost of the peramivir group was significantly higher than that of the oseltamivir and control groups. The incidence of drug reactions in the peramivir group was significantly lower than that in the oseltamivir group. The rate of antibiotic usage in the peramivir group was significantly lower than that in the oseltamivir and control groups. Peramivir can significantly alleviate symptoms and reduce the use of antibiotics in children with suspected influenza. Peramivir has demonstrated good efficacy, high safety, and good compliance in treating children with suspected influenza infection.

Aerobic composting is a sustainable method for chicken manure recycling, while its unsuitable porosity and carbon to nitrogen ratio (C/N) may result in high nitrogen loss and incomplete composting. With the aim to investigate the effects of carbon-based additives and two ventilation rates on chicken manure composting and microbial community, two series of treatments were set up for chicken manure composting, in order to investigate their effects on the biodegradation process, ammonia (NH3) emission, nitrogen loss, physiochemical properties and microbial community. The results showed that additives and ventilation rates set in the current study influenced the carbon dioxide (CO2) production from the 2nd week and also the physiochemical parameters during the entire process, while no inhibitory effect on the maturity were observed. With woody peat as additive, the NH3 emission amount and nitrogen loss rate were shown as 15.86 mg and 4.02%, less than those in other treatments, 31.08-80.13 mg and 24.26-34.24%, respectively. The high aeration rate increased the NH3 emission and nitrogen loss, which were varied when the additives were different. The terminal restriction fragment length polymorphism (T-RFLP) results showed that the additives and the ventilation rates changed the microbial community, while the prominent microbial clones belonged to the class of Bacilli and Clostridia (in the phylum of Firmicutes), and Alphaproteobacteria, Deltaproteobacteria and Gammaproteobacteria (in the phylum of Proteobacteria). Bacillus spp. was observed to be the most dominant bacteria in all the composting stages and treatments. It was concluded that woody peat could improve chicken manure composting more than other additives, especially on reducing nitrogen loss, meanwhile 0.18 L‧min-1‧kg-1 DM was suitable for various additives. Therefore, suitable additive and aeration rate could be used in practical application, which could significantly reduce nitrogen loss without influence on the compos maturity process.

As part of a large-scale project whose goal was to identify candidate effector proteins in Magnaporthe oryzae, we developed a suite of vectors that facilitate high-throughput protein localization experiments in fungi. These vectors utilize Gateway recombinational cloning to place a gene's promoter and coding sequences upstream and in frame with enhanced cyan fluorescent protein, green fluorescent protein (GFP), monomeric red fluorescence protein (mRFP), and yellow fluorescent protein or a nucleus-targeted mCHERRY variant. The respective Gateway cassettes were incorporated into Agrobacterium-based plasmids to allow efficient fungal transformation using hygromycin or geneticin resistance selection. mRFP proved to be more sensitive than the GFP spectral variants for monitoring proteins secreted in planta; and extensive testing showed that Gateway-derived fusion proteins produced localization patterns identical to their “directly fused” counterparts. Use of plasmid for fungal protein localization (pFPL) vectors with two different selectable markers provided a convenient way to label fungal cells with different fluorescent proteins. We demonstrate the utility of the pFPL vectors for identifying candidate effector proteins and we highlight a number of important factors that must be taken into consideration when screening for proteins that are translocated across the host plasma membrane.

The freezing−thawing cycle is a basic feature of a frozen soil ecosystem, and it affects the growth of alpine vegetation both directly and indirectly. As the climate changes, the freezing−thawing mode, along with its impact on frozen soil ecosystems, also changes. In this research, the freezing−thawing cycle of the Nagqu River Basin in the Qinghai−Tibet Plateau was studied. Vegetation growth characteristics and microbial abundance were analyzed under different freezing−thawing modes. The direct and indirect effects of the freezing−thawing cycle mode on alpine vegetation in the Nagqu River Basin are presented, and the changing trends and hazards of the freezing−thawing cycle mode due to climate change are discussed. The results highlight two major findings. First, the freezing−thawing cycle in the Nagqu River Basin has a high-frequency mode (HFM) and a low-frequency mode (LFM). With the influence of climate change, the LFM is gradually shifting to the HFM. Second, the alpine vegetation biomass in the HFM is lower than that in the LFM. Frequent freezing−thawing cycles reduce root cell activity and can even lead to root cell death. On the other hand, frequent freezing−thawing cycles increase microbial (Bradyrhizobium, Mesorhizobium, and Pseudomonas) death, weaken symbiotic nitrogen fixation and the disease resistance of vegetation, accelerate soil nutrient loss, reduce the soil water holding capacity and soil moisture, and hinder root growth. This study provides a complete response mechanism of alpine vegetation to the freezing−thawing cycle frequency while providing a theoretical basis for studying the change direction and impact on the frozen soil ecosystem due to climate change.

The non-pathogenic Human Pegivirus (HPgV, formerly GBV-C/HGV), the most prevalent RNA virus worldwide, is known to be associated with reduced morbidity and mortality in HIV-infected individuals. Although previous studies documented its ubiquity and important role in HIV-infected individuals, little is known about the underlying genetic mechanisms that maintain high genetic diversity of HPgV within the HIV-infected individuals. To assess the within-host genetic diversity of HPgV and forces that maintain such diversity within the co-infected hosts, we performed phylogenetic analyses taking into account 229 HPgV partial E1-E2 clonal sequences representing 15 male and 8 female co-infected HIV patients from Hubei province of central China. Our results revealed the presence of eleven strongly supported clades. While nine clades belonged to genotype 3, two clades belonged to genotype 2. Additionally, four clades that belonged to genotype 3 exhibited inter-clade recombination events. The presence of clonal sequences representing multiple clades within the HIV-infected individual provided the evidence of co-circulation of HPgV strains across the region. Of the 23 patients, six patients (i.e., five males and one female) were detected to have HPgV recombinant sequences. Our results also revealed that while male patients shared the viral strains with other patients, viral strains from the female patients had restricted dispersal. Taken together, the present study revealed that multiple infections with divergent HPgV viral strains may have caused within-host genetic recombination, predominantly in male patients, and therefore, could be the major driver in shaping genetic diversity of HPgV.

The cell response to virus infection and virus perturbation of that response is dynamic and is reflected by changes in cell susceptibility to infection. In this study, we evaluated the response of human epithelial cells to sequential infections with human respiratory syncytial virus strains A2 and B to determine if a primary infection with one strain will impact the ability of cells to be infected with the second as a function of virus strain and time elapsed between the two exposures. Infected cells were visualized with fluorescent markers, and location of all cells in the tissue culture well were identified using imaging software. We employed tools from spatial statistics to investigate the likelihood of a cell being infected given its proximity to a cell infected with either the homologous or heterologous virus. We used point processes, K-functions, and simulation procedures designed to account for specific features of our data when assessing spatial associations. Our results suggest that intrinsic cell properties increase susceptibility of cells to infection, more so for RSV-B than for RSV-A. Further, we provide evidence that the primary infection can decrease susceptibility of cells to the heterologous challenge virus but only at the 16 h time point evaluated in this study. Our research effort highlights the merits of integrating empirical and statistical approaches to gain greater insight on in vitro dynamics of virus-host interactions.

Fission yeast cells express Rpl32-2 highly while Rpl32-1 lowly in log phase; in contrast, expression of Rpl32-1 raises and reaches a peak level while Rpl32-2 is downregulated to a low basic level when cells enter into stationary phase. Overexpression of Rpl32-1 inhibits cell growth while overexpression of Rpl32-2 does not. Deleting rpl32-2 impairs cell growth more severely than deleting rpl32-1 does. Cell growth impaired by deleting either paralog can be rescued completely by reintroducing rpl32-2, but only partly by rpl32-1. Overexpression of Rpl32-1 inhibits cell division, yielding 4c DNA and multiple septa, while overexpressed Rpl32-2 promotes it. Transcriptomics analysis proved that Rpl32 paralogs regulate expression of a subset of genes related with cell division and stress response in a distinctive way. This functional difference of the two paralogs is due to their difference of 95(th) amino acid residue. The significance of a competitive inhibition between Rpl32 paralogs on their expression is discussed.

GB virus C (GBV-C), which is highly prevalent among HIV/AIDS, seemed to slow the HIV disease progression. The HIV/GBV-C co-infected individuals may represent an interesting model for the investigation of the role played by HIV infection and/or the immune system in driving the evolution of the GBV-C viral populations. The present study investigated the prevalence and population dynamics of GB virus C in HIV infected individuals representing 13 geographic regions of Hubei Province of China. Approximately 37% of HIV-1 infected individuals were infected with GBV-C and genotype 3 is appeared to be predominant. Utilizing the 196 complete E2 nucleotide sequence data from 10 HIV/GBV-C infected individuals and employing coalescence based phylogenetic approaches; the present study has investigated the intra-host dynamics of GBV-C. The results revealed patient-specific unique GBV-C viral lineages and each viral lineage showed the evidence of rapid population expansion in respective HIV-1 infected patients, thus suggesting HIV-1 was unlikely to have been inhibiting effect on the GBV-C viral replication. GBV-C in all patients has experienced intense purifying selection, suggesting the GBV-C viral invasion and subsequent expansion within the HIV-1 infected hosts without any modification of the functional epitopes at their membrane protein. The finding of within host GBV-C recombinant sequences indicated recombination was one of the significant forces in the evolution and divergence of GBV-C.