He Y, Zhang R, Lyu Q, Peng B, Mei S, Sun Y, Kong D, Peng C, Lyu Z, Wei X, Zhu C, Xiao X, Li S, Lu Q, Chen J, Zhang H, Zou X, Feng T, and Chen L
Competing Interests: No conflicts of interest. Table S1Demographic characteristics of 4 local cases and 39 imported cases, and specimen testing information.CaseGenderAge (years)Date of first positive detectionof COVID-19 virusCt value (ORF1ab/N) of specimen used for sequencingDaanBojieNote: There were 43 subjects in total, and the male/female ratio and mean age of subjects was 2.58∶1 and 40.9 years, respectively. Abbreviations: Undet=Undetected; Ct=Cycle threshold; COVID-19=Coronavirus disease 2019. Case AMale30June 14, 202114/1816/18Case BFemale21June 17, 202123/2122/22Case CMale35June 18, 202124/2222/24Case DFemale64June 20, 202130/3035/28Case 1Male36June 11, 202131/3130/31Case 2Male35June 11, 202131/3126/28Case 3Female42June 11, 202133/3434/34Case 4Female58June 11, 202130/2727/28Case 5Male53June 13, 202117/1616/17Case 6Male32June 14, 202124/2324/23Case 7Male52June 14, 202117/1716/17Case 8Male33June 15, 202117/1515/17Case 9Male47June 15, 202116/1615/16Case 10Male64June 15, 202121/2020/21Case 11Male40June 15, 202115/1414/15Case 12Male50June 15, 202118/1716/18Case 13Male33June 15, 202128/2627/28Case 14Female31June 15, 202119/1718/17Case 15Male61June 15, 202114/1415/15Case 16Female38June 15, 202135/3436/33Case 17Male39June 15, 202137/40Undet/35Case 18Female50June 15,202114/1514/14Case 19Male35June 15, 202117/1616/17Case 20Male58June 15, 202116/1515/16Case 21Female47June 15, 202129/2526/26Case 22Male29June 15, 202135/3538/UndetCase 23Male32June 15, 202138/36Undet/35Case 24Male63June 15, 202135/3435/32Case 25Female63June 15, 202135/3333/33Case 26Male45June 15, 202138/35Undet/UndetCase 27Male44June 15, 2021Undet/38Undet/35Case 28Male61June 15, 2021Undet/3737/UndetCase 29Male58June 15, 202137/UndetUndet/36Case 30Male9June 15, 202121/2122/22Case 31Female45June 15, 202128/2827/28Case 32Male42June 15, 202115/1514/15Case 33Male35June 16, 202126/2423/26Case 34Male1June 16, 202130/2727/29Case 35Female24June 17, 202134/3032/30Case 36Male25June 17, 202119/1819/18Case 37Female32June 19, 202122/1919/20Case 38Male38June 19, 202131/2928/30Case 39Female28June 25, 202118/1617/18Table S2Genome sequence information for 30 SARS-CoV-2 strains of lineage B.1.617.2 from this study.CaseVirus nameLength in nt(% GC content)Closest strain by an audacity instantsearch in GISAIDAbbreviation: nt=Nucleotide.Case AhCoV-19/Shenzhen/IVDC-06-14/202129,813nt (37.97)hCoV-19/England/MILK-155F811/2021Case BhCoV-19/Shenzhen/IVDC-06-17/202129,562nt (37.98)hCoV-19/England/MILK-155F811/2021Case ChCoV-19/Shenzhen/IVDC-06-18/202129,428nt (37.98)hCoV-19/England/MILK-155F811/2021Case DhCoV-19/Shenzhen/IVDC-06-20/202129,612nt (37.98)hCoV-19/England/MILK-155F811/2021Case 1hCoV-19/Shenzhen/IVDC-0610-01/202129,702nt (37.96)hCoV-19/India/GJ-NCDC-NIV-INSACOG-24095/2021Case 2hCoV-19/Shenzhen/IVDC-0610-02/202129,813nt (37.97)hCoV-19/England/MILK-155F811/2021Case 4hCoV-19/Shenzhen/IVDC-0610-04/202129,836nt (37.96)hCoV-19/England/MILK-155F811/2021Case 5hCoV-19/Shenzhen/IVDC-0610-05/202129,555nt (37.99)hCoV-19/England/MILK-155F811/2021Case 6hCoV-19/Shenzhen/IVDC-0610-06/202129,657nt (38.00)hCoV-19/England/MILK-155F811/2021Case 7hCoV-19/Shenzhen/IVDC-0610-07/202129,814nt (37.97)hCoV-19/England/MILK-155F811/2021Case 8hCoV-19/Shenzhen/IVDC-0610-08/202129,824nt (37.97)hCoV-19/England/MILK-155F811/2021Case 9hCoV-19/Shenzhen/IVDC-0610-09/202129,831nt (37.96)hCoV-19/England/MILK-155F811/2021Case 10hCoV-19/Shenzhen/IVDC-0610-10/202129,833nt (37.95)hCoV-19/England/MILK-155F811/2021Case 11hCoV-19/Shenzhen/IVDC-0610-11/202129,830nt (37.96)hCoV-19/England/MILK-155F811/2021Case 12hCoV-19/Shenzhen/IVDC-0610-12/202129,830nt (37.96)hCoV-19/England/MILK-155F811/2021Case 13hCoV-19/Shenzhen/IVDC-0610-13/202129,710nt (37.99)hCoV-19/England/MILK-155F811/2021Case 14hCoV-19/Shenzhen/IVDC-0610-14/202129,551nt (37.98)hCoV-19/England/MILK-155F811/2021Case 15hCoV-19/Shenzhen/IVDC-0610-15/202129,834nt (37.96)hCoV-19/England/MILK-155F811/2021Case 18hCoV-19/Shenzhen/IVDC-0610-18/202129,820nt (37.96)hCoV-19/England/MILK-155F811/2021Case 19hCoV-19/Shenzhen/IVDC-0610-19/202129,828nt (37.96)hCoV-19/England/MILK-155F811/2021Case 20hCoV-19/Shenzhen/IVDC-0610-20/202129,820nt (37.96)hCoV-19/England/MILK-155F811/2021Case 21hCoV-19/Shenzhen/IVDC-0610-21/202129,574nt (37.99)hCoV-19/England/MILK-155F811/2021Case 30hCoV-19/Shenzhen/IVDC-0610-30/202129,827nt (37.97)hCoV-19/England/MILK-155F811/2021Case 31hCoV-19/Shenzhen/IVDC-0610-31/202129,829nt (37.96)hCoV-19/England/MILK-155F811/2021Case 32hCoV-19/Shenzhen/IVDC-0610-32/202129,849nt (37.96)hCoV-19/England/MILK-155F811/2021Case 34hCoV-19/Shenzhen/IVDC-0610-34/202129,809nt (37.97)hCoV-19/England/MILK-155F811/2021Case 36hCoV-19/Shenzhen/IVDC-0610-36/202129,819nt (37.96)hCoV-19/England/MILK-155F811/2021Case 37hCoV-19/Shenzhen/IVDC-0610-37/202129,827nt (37.97)hCoV-19/England/MILK-155F811/2021Case 38hCoV-19/Shenzhen/IVDC-0610-38/202129,553nt (37.99)hCoV-19/England/MILK-155F811/2021Case 39hCoV-19/Shenzhen/IVDC-0610-39/202129,797nt (37.94)hCoV-19/England/MILK-155F811/2021