678 results on '"Wondrack L"'
Search Results
2. Two New Mechanisms of Macrolide Resistance in Clinical Strains of Streptococcus pneumoniae from Eastern Europe and North America
- Author
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Tait-Kamradt, A., primary, Davies, T., additional, Appelbaum, P. C., additional, Depardieu, F., additional, Courvalin, P., additional, Petitpas, J., additional, Wondrack, L., additional, Walker, A., additional, Jacobs, M. R., additional, and Sutcliffe, J., additional
- Published
- 2000
- Full Text
- View/download PDF
3. mefE is necessary for the erythromycin-resistant M phenotype in Streptococcus pneumoniae
- Author
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Tait-Kamradt, A, primary, Clancy, J, additional, Cronan, M, additional, Dib-Hajj, F, additional, Wondrack, L, additional, Yuan, W, additional, and Sutcliffe, J, additional
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- 1997
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4. Detection of erythromycin-resistant determinants by PCR
- Author
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Sutcliffe, J, primary, Grebe, T, additional, Tait-Kamradt, A, additional, and Wondrack, L, additional
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- 1996
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5. Glycylcyclines bind to the high-affinity tetracycline ribosomal binding site and evade Tet(M)- and Tet(O)-mediated ribosomal protection
- Author
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Bergeron, J, primary, Ammirati, M, additional, Danley, D, additional, James, L, additional, Norcia, M, additional, Retsema, J, additional, Strick, C A, additional, Su, W G, additional, Sutcliffe, J, additional, and Wondrack, L, additional
- Published
- 1996
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6. Streptococcus pneumoniae and Streptococcus pyogenes resistant to macrolides but sensitive to clindamycin: a common resistance pattern mediated by an efflux system
- Author
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Sutcliffe, J, primary, Tait-Kamradt, A, additional, and Wondrack, L, additional
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- 1996
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7. Clinical strain of Staphylococcus aureus inactivates and causes efflux of macrolides
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Wondrack, L, primary, Massa, M, additional, Yang, B V, additional, and Sutcliffe, J, additional
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- 1996
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8. Assays to detect and characterize human immunodeficiency virus type 1 (HIV-1) receptor antagonists, compounds that inhibit binding of the HIV-1 surface glycoprotein, gp120, to the CD4 receptor on human T lymphocytes
- Author
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Clancy, J, primary, Tait-Kamradt, A, additional, Petitpas, J, additional, Manousos, M, additional, McGuirk, P R, additional, Subashi, T, additional, Watts, P, additional, and Wondrack, L, additional
- Published
- 1994
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9. Nasal Carriage of Antimicrobial-Resistant Staphylococci by Fallow Deer (Dama dama) Taken in a Natural Park of Tuscany, Central Italy.
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Cagnoli, Giulia, Bertelloni, Fabrizio, Bongi, Paolo, Piva, Silvia, Del Frate, Marco, Scarpellini, Raffaele, Apollonio, Marco, and Ebani, Valentina Virginia
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FALLOW deer ,TOXIC shock syndrome ,VETERINARY public health ,DRUG resistance in bacteria ,WILDLIFE monitoring ,ENTEROTOXINS - Abstract
Wild animals are recognized as significant reservoirs for various zoonotic pathogens, including antibiotic-resistant bacteria. This study aimed to investigate the presence of Staphylococcus spp. strains in fallow deer (Dama dama) inhabiting a natural preserve in Central Italy and to examine the phenotypic and genotypic antimicrobial resistance and the presence of some virulence genes among the isolates. During July and December 2022, nasal swabs were collected from 175 fallow deer, which were then analyzed through bacteriological cultures. In total, 176 Staphylococcus spp. strains were isolated and subsequently identified using MALDI-TOF mass spectrometry. S. aureus was the most abundant species with 66 (37.5%) strains, followed by S. hyicus, 34 (19.31%) strains, S. sciuri, 32 (18.18%) strains, S. chromogenes, 27 (15.34%) strains, S. xylosus, 11 (6.25%) strains, S. warneri, 5 (2.84%) strains, and S. devriesei, 1 (0.56%) strain. Antimicrobial susceptibility was assessed for each isolate via the agar disk diffusion method, testing a panel of 13 molecules belonging to 9 antimicrobial classes. The highest resistance rates were detected for penicillin (29.55%), rifampicin (22.73%), and amikacin (20.45%). Notably, intermediate susceptibility was observed for erythromycin (61.93%), enrofloxacin (28.41%), and ceftiofur (21.02%). Conversely, the strains exhibited particularly high susceptibility to amoxicillin/clavulanic acid (99.43%), cefoxitin (97.73%), and vancomycin (96.02%). Based on the results, 32 (18.18%) isolates were classified as multidrug-resistant (MDR). Two strains of S. chromogenes and one strain of S. xylosus, both resistant to penicillin, tested positive for the blaZ gene. No methicillin-resistant strains were found, and none of the isolates harbored genes associated with enterotoxin and toxic shock syndrome toxin production. This study highlights the potential role of wildlife, particularly fallow deer, as reservoirs of antibiotic-resistant Staphylococcus spp. strains. Such findings underscore the importance of monitoring wildlife for antimicrobial resistance, which could have implications for public health and veterinary medicine. [ABSTRACT FROM AUTHOR]
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- 2024
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10. Unravelling Antimicrobial Resistance in Mycoplasma hyopneumoniae : Genetic Mechanisms and Future Directions.
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Jafari Jozani, Raziallah, Khallawi, Mauida F. Hasoon Al, Trott, Darren, Petrovski, Kiro, Low, Wai Yee, and Hemmatzadeh, Farhid
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MYCOPLASMA hyopneumoniae ,HORIZONTAL gene transfer ,WHOLE genome sequencing ,MACHINE learning ,SUSTAINABILITY ,TANDEM repeats - Abstract
Simple Summary: Antimicrobial resistance (AMR) in bacteria is a critical issue threatening both human and animal health. This paper focuses on Mycoplasma hyopneumoniae, a bacterium causing lung disease in pigs, leading to significant economic losses in the swine industry worldwide. The problem is that this bacterium has developed resistance to many antibiotics, making treatment difficult. The study aims to understand the genetic basis of AMR by analyzing the reported genome of Mycoplasma hyopneumoniae strains using advanced techniques like whole genome sequencing. Key findings indicate that genetic mutations in certain genes are responsible for this resistance. This review paper suggests a multidisciplinary approach combining genetic, phenotypic, and bioinformatics data is essential in combating ever-increasing AMR in Mycoplasma hyopneumoniae. These insights could lead to better treatment strategies, ultimately benefiting the swine industry by improving animal health and reducing economic losses. Understanding and managing AMR in Mycoplasma hyopneumoniae is crucial for developing more effective antimicrobial agents and securing sustainable food production, which has a direct impact on society by ensuring food security and animal welfare. Antimicrobial resistance (AMR) in Mycoplasma hyopneumoniae, the causative agent of Enzootic Pneumonia in swine, poses a significant challenge to the swine industry. This review focuses on the genetic foundations of AMR in M. hyopneumoniae, highlighting the complexity of resistance mechanisms, including mutations, horizontal gene transfer, and adaptive evolutionary processes. Techniques such as Whole Genome Sequencing (WGS) and multiple-locus variable number tandem repeats analysis (MLVA) have provided insights into the genetic diversity and resistance mechanisms of M. hyopneumoniae. The study underscores the role of selective pressures from antimicrobial use in driving genomic variations that enhance resistance. Additionally, bioinformatic tools utilizing machine learning algorithms, such as CARD and PATRIC, can predict resistance traits, with PATRIC predicting 7 to 12 AMR genes and CARD predicting 0 to 3 AMR genes in 24 whole genome sequences available on NCBI. The review advocates for a multidisciplinary approach integrating genomic, phenotypic, and bioinformatics data to combat AMR effectively. It also elaborates on the need for refining genotyping methods, enhancing resistance prediction accuracy, and developing standardized antimicrobial susceptibility testing procedures specific to M. hyopneumoniae as a fastidious microorganism. By leveraging contemporary genomic technologies and bioinformatics resources, the scientific community can better manage AMR in M. hyopneumoniae, ultimately safeguarding animal health and agricultural productivity. This comprehensive understanding of AMR mechanisms will be beneficial in the adaptation of more effective treatment and management strategies for Enzootic Pneumonia in swine. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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11. Two New Mechanisms of Macrolide Resistance in Clinical Strains ofStreptococcus pneumoniaefrom Eastern Europe and North America
- Author
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Tait-Kamradt, A., Davies, T., Appelbaum, P. C., Depardieu, F., Courvalin, P., Petitpas, J., Wondrack, L., Walker, A., Jacobs, M. R., and Sutcliffe, J.
- Abstract
ABSTRACTResistance to macrolides in pneumococci is generally mediated by methylation of 23S rRNA via erm(B) methylase which can confer a macrolide (M)-, lincosamide (L)-, and streptogramin B (SB)-resistant (MLSB) phenotype or by drug efflux via mef(A) which confers resistance to 14- and 15-membered macrolides only. We studied 20 strains with unusual ML or MSBphenotypes which did not harbor erm(B) ormef(A). The strains had been isolated from patients in Eastern Europe and North America from 1992 to 1998. These isolates were found to contain mutations in genes for either 23S rRNA or ribosomal proteins. Three strains from the United States with an ML phenotype, each representing a different clone, were characterized as having an A2059G (Escherichia colinumbering) change in three of the four 23S rRNA alleles. Susceptibility to macrolides and lincosamides decreased as the number of alleles in isogenic strains containing A2059G increased. Sixteen MSBstrains from Eastern Europe were found to contain a 3-amino-acid substitution (69GTG71to TPS) in a highly conserved region of the ribosomal protein L4 (63KPWRQKGTGRAR74). These strains formed several distinct clonal types. The single MSBstrain from Canada contained a 6-amino-acid L4 insertion (69GTGREKGTGRAR), which impacted growth rate and also conferred a 500-fold increase in MIC on the ketolide telithromycin. These macrolide resistance mechanisms from clinical isolates are similar to those recently described for laboratory-derived mutants.
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- 2000
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12. Urea: obligate intermediate of pyrimidine-ring catabolism in Rhodosporidium toruloides
- Author
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Thwaites, W M, Davis, C H, Wallis-Biggart, N, Wondrack, L M, and Abbott, M T
- Abstract
Urea has been shown to be an obligate intermediate in and the penultimate product of the catabolism of pyrimidine-ring nitrogen in Rhodosporidium toruloides (Rhodotorula). One of a series of mutants selected for its inability to utilize uracil as a sole source of nitrogen was unable to utilize urea also. The mutant accumulated urea and failed to form 14CO2 during supplementation with [2-14C]uracil. Radioautograms from the resulting cell extracts and media failed to reveal expected intermediates. Cell-free extracts of the mutant were shown to lack urease activity. Revertants of the mutant were essentially wild type in all tested attributes. Elements of the reductive pathway for pyrimidine catabolism are present in Rhodosporidium (O. A. Milstein and M. L. Bekker, J. Bacteriol. 127: 1-6, 1976), but is has not been determined whether this pathway is involved with production of urea.
- Published
- 1979
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13. Genetic transformation of putative cariogenic properties in Streptococcus mutans
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Perry, D, Wondrack, L M, and Kuramitsu, H K
- Abstract
Rough colonial morphology and bacteriocin production, two properties which may be associated with the cariogenicity of Streptococcus mutans, were transformed into several strain GS-5 mutants defective in each respective property. Transformation was determined by observing the frequency of cotransfer of these properties with different reference markers. The rough colonial transformants were identical to the parental GS-5 strain with respect to ability to synthesize water-insoluble glucans and undergo in vitro sucrose-dependent colonization of glass surfaces. Alterations in the growth medium and the concentration of the initial cell inoculum resulted in an approximate 10-fold increase in the frequency of transformation of strain GS-5 compared to previous observations.
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- 1983
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14. Requirements for fatty acid synthesis and a chelation-sensitive step in the production of glucosyltransferase by Streptococcus mutans
- Author
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Kuramitsu, H K and Wondrack, L
- Abstract
The antibiotic cerulenin differentially inhibited the production of glucosyltransferase activity by Streptococcus mutans GS5. Cerulenin preferentially inhibited [14C]acetate incorporation into cellular lipids but did not affect protein synthesis or ribonucleic acid synthesis in the same manner. No significant intracellular accumulation of glucosyltransferase activity could be demonstrated in cultures treated with cerulenin. On the other hand, another inhibitor of lipid synthesis, sodium chlorophenoxyisobutyrate, did not differentially inhibit glucosyltransferase expression. In addition, the role of a metal-requiring protease in the production of glucosyltransferase activity was suggested by the observation that the chelator quinacrine differentially inhibited the production of the enzyme.
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- 1980
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15. Insoluble glucan synthesis by Streptococcus mutans serotype c strains
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Kuramitsu, H K and Wondrack, L
- Abstract
Both dextransucrase and mutansynthetase activities have been purified from the culture fluids of Streptococcus mutans GS-5 (serotype c). Although homogeneous dextransucrase preparations normally synthesize little insoluble glucan, essentially all of the glucan synthesized by this enzyme in the presence of 1.5 M (NH4)2SO4 was water insoluble. Linkage analysis of the insoluble glucans indicated that the presence of NH4+ increased the portion of alpha-1,3-glucose linkages relative to alpha-1,6-glucose units in the product. Chromatofocusing of aggregated glucosyltransferase fractions synthesizing predominantly insoluble glucan yielded primarily dextransucrase activity separable from relatively low levels of mutansynthetase activity. The latter enzyme was detected only in 18-h assays and synthesized primer-dependent insoluble glucan, which was decreased in the presence of NH4+. In the absence of primer dextran T10, the addition of dextransucrase also stimulated insoluble glucan synthesis by mutansynthetase. Dextransucrase and mutansynthetase appear to be distinct enzymes, since the latter possesses a higher molecular weight (155,000 compared to 140,000), a much lower isoelectric point, and did not cross-react with antibody directed against dextransucrase. These results are discussed relative to the mechanism of insoluble glucan synthesis by S. mutans serotype c strains.
- Published
- 1983
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16. Interaction of Streptococcus mutansGlucosyltransferases with Teichoic Acids
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Kuramitsu, H. K., Wondrack, L., and McGuinness, M.
- Abstract
The Streptococcus mutansGS5 glucosyltransferase activities (both water-soluble and -insoluble glucan-synthesizing fractions) were inhibited by purified lipoteichoic acid. In vitro sucrose-dependent colonization of smooth surfaces by strain GS5 was also markedly reduced in the presence of the amphipathic molecules. The inhibition of soluble glucan synthesis by lipoteichoic acid appeared to be competitive with respect to both sucrose and primer dextran T10. These inhibitory effects were dependent on the presence of the fatty acid components of lipoteichoic acid since deacylated lipoteichoic acids did not inhibit glucosyltransferase activity. However, the deacylated molecules did interact with the enzymes since deacylated lipoteichoic acid partially protected the enzyme activity against heat inactivation and also induced the formation of high-molecular-weight enzyme complexes from the soluble glucan-synthesizing fraction. The presence of teichoic acid in high-molecular-weight aggregates of glucosyltransferase isolated from the culture fluids of strain GS5 was suggested by the detection of polyglycerophosphate in these fractions. In addition to strain GS5, two other organisms containing polyglycerophosphate teichoic acids, Lactobacillus caseiand Lactobacillus fermentum, were demonstrated to bind glucosyltransferase activity. These results are discussed relative to the potential role of teichoic acid-glucosyltransferase interactions in enzyme binding to the cell surface of S. mutansand the formation of high-molecular-weight enzyme aggregates in the culture fluids of the organism.
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- 1980
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17. Interaction of Streptococcus mutans Glucosyltransferases with Teichoic Acids
- Author
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Kuramitsu, H. K., primary, Wondrack, L., additional, and McGuinness, M., additional
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- 1980
- Full Text
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18. Characterization of growth hormone releasing factor analog expression in Saccharomyces cerevisiae.
- Author
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Craig WS, Wondrack L, Siegel R, Patthi S, Davis GR, Velicelebi G, Mowles TF, and Thill GP
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- Amino Acid Sequence, Amino Acids analysis, Animals, Biological Assay, Cells, Cultured, Genetic Vectors, Growth Hormone-Releasing Hormone genetics, Mating Factor, Molecular Sequence Data, Peptide Fragments metabolism, Peptides genetics, Pituitary Gland, Anterior cytology, Promoter Regions, Genetic genetics, Protein Sorting Signals genetics, Rats, Saccharomyces cerevisiae genetics, Transfection genetics, Gene Expression, Growth Hormone-Releasing Hormone analogs & derivatives, Peptide Fragments genetics, Pituitary Gland, Anterior physiology, Protein Engineering methods
- Abstract
An analog of growth hormone releasing factor (GRF), [Leu27]GRF(1-40)-OH, has been expressed and secreted in Saccharomyces cerevisiae under the control of the alpha-factor gene promoter and prepro sequence. A single pair of consecutive basic residues served as a processing site between the alpha-factor sequences and the GRF sequences. [Leu27]GRF(1-40)-OH from fermentor broth containing 20-30 mg/L of immunoreactive peptides was shown to be correctly processed and to possess biological activity as measured in vitro and in vivo. Additional peptides purified from broth appear to result from proteolytic degradation of the original translation product. Analysis of the amino acid compositions and sequences of these peptides suggests that processing enzymes may be responsible for some of the degradation.
- Published
- 1991
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19. Macrolide resistance among Streptococcus agalactiae during COVID-19 public health emergency in Brazil.
- Author
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Barros, Rosana Rocha, Barros, Clarissa Campos, Kegele, Fabíola C. Oliveira, Francisca da S. N. Soares, Maria, and de Paula, Geraldo Renato
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- 2024
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20. Effect of erythromycin residuals in food on the development of resistance in Streptococcus pneumoniae: an in vivo study in Galleria mellonella.
- Author
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Baranchyk, Yuliia, Gestels, Zina, Van den Bossche, Dorien, Abdellati, Saïd, Britto Xavier, Basil, Manoharan-Basil, Sheeba Santhini, and Kenyon, Chris
- Subjects
GREATER wax moth ,STREPTOCOCCUS pneumoniae ,ERYTHROMYCIN ,WHOLE genome sequencing ,AGAR ,STREPTOCOCCAL diseases ,IN vivo studies ,FOSFOMYCIN - Abstract
Background: The use of antimicrobials to treat food animals may result in antimicrobial residues in foodstuffs of animal origin. The European Medicines Association (EMA) and World Health Organization (WHO) define safe antimicrobial concentrations in food based on acceptable daily intakes (ADIs). It is unknown if ADI doses of antimicrobials in food could influence the antimicrobial susceptibility of human-associated bacteria. Objectives: This aim of this study was to evaluate if the consumption of ADI doses of erythromycin could select for erythromycin resistance in a Galleria mellonella model of Streptococcus pneumoniae infection. Methods: A chronic model of S. pneumoniae infection in G. mellonella larvae was used for the experiment. Inoculation of larvae with S. pneumoniae was followed by injections of erythromycin ADI doses (0.0875 and 0.012 μg/ml according to EMA and WHO, respectively). Isolation of S. pneumoniae colonies was then performed on selective agar plates. Minimum inhibitory concentrations (MICs) of resistant colonies were measured, and whole genome sequencing (WGS) was performed followed by variant calling to determine the genetic modifications. Results: Exposure to single doses of both EMA and WHO ADI doses of erythromycin resulted in the emergence of erythromycin resistance in S. pneumoniae. Emergent resistance to erythromycin was associated with a mutation in rplA, which codes for the L1 ribosomal protein and has been linked to macrolide resistance in previous studies. Conclusion: In our in vivo model, even single doses of erythromycin that are classified as acceptable by the WHO and EMA induced significant increases in erythromycin MICs in S. pneumoniae. These results suggest the need to include the induction of antimicrobial resistance (AMR) as a significant criterion for determining ADIs. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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21. Comparison of qPCR and metagenomic sequencing methods for quantifying antibiotic resistance genes in wastewater.
- Author
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Daw Elbait, Gihan, Daou, Mariane, Abuoudah, Miral, Elmekawy, Ahmed, Hasan, Shadi W., Everett, Dean B., Alsafar, Habiba, Henschel, Andreas, and Yousef, Ahmed F.
- Subjects
DRUG resistance in bacteria ,ANTIBIOTIC residues ,SEWAGE ,METAGENOMICS ,SEWAGE disposal plants ,SHOTGUN sequencing - Abstract
Surveillance methods of circulating antibiotic resistance genes (ARGs) are of utmost importance in order to tackle what has been described as one of the greatest threats to humanity in the 21
st century. In order to be effective, these methods have to be accurate, quickly deployable, and scalable. In this study, we compare metagenomic shotgun sequencing (TruSeq DNA sequencing) of wastewater samples with a state-of-the-art PCR-based method (Resistomap HT-qPCR) on four wastewater samples that were taken from hospital, industrial, urban and rural areas. ARGs that confer resistance to 11 antibiotic classes have been identified in these wastewater samples using both methods, with the most abundant observed classes of ARGs conferring resistance to aminoglycoside, multidrug-resistance (MDR), macrolide-lincosamide-streptogramin B (MLSB), tetracycline and beta-lactams. In comparing the methods, we observed a strong correlation of relative abundance of ARGs obtained by the two tested methods for the majority of antibiotic classes. Finally, we investigated the source of discrepancies in the results obtained by the two methods. This analysis revealed that false negatives were more likely to occur in qPCR due to mutated primer target sites, whereas ARGs with incomplete or low coverage were not detected by the sequencing method due to the parameters set in the bioinformatics pipeline. Indeed, despite the good correlation between the methods, each has its advantages and disadvantages which are also discussed here. By using both methods together, a more robust ARG surveillance program can be established. Overall, the work described here can aid wastewater treatment plants that plan on implementing an ARG surveillance program. [ABSTRACT FROM AUTHOR]- Published
- 2024
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22. Mechanisms of Streptococcus pyogenes Antibiotic Resistance
- Author
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Cattoir V, Ferretti JJ, Stevens DL, and Fischetti VA
- Published
- 2022
23. Wounds of Companion Animals as a Habitat of Antibiotic-Resistant Bacteria That Are Potentially Harmful to Humans—Phenotypic, Proteomic and Molecular Detection.
- Author
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Lenart-Boroń, Anna, Stankiewicz, Klaudia, Czernecka, Natalia, Ratajewicz, Anna, Bulanda, Klaudia, Heliasz, Miłosz, Sosińska, Daria, Dworak, Kinga, Ciesielska, Dominika, Siemińska, Izabela, and Tischner, Marek
- Subjects
DRUG resistance in bacteria ,PETS ,HABITATS ,VETERINARY medicine ,PROTEOMICS ,KLEBSIELLA pneumoniae ,ENTEROCOCCUS ,FOSFOMYCIN - Abstract
Skin wounds and their infections by antibiotic-resistant bacteria (ARB) are very common in small animals, posing the risk of acquiring ARB by pet owners or antibiotic resistance gene (ARG) transfer to the owners' microbiota. The aim of this study was to identify the most common pathogens infecting wounds of companion animals, assess their antibiotic resistance, and determine the ARGs using culture-based, molecular, and proteomic methods. A total of 136 bacterial strains were isolated from wound swabs. Their species was identified using chromogenic media, followed by MALDI-TOF spectrometry. Antibiotic resistance was tested using disc diffusion, and twelve ARGs were detected using PCRs. The dominant species included Staphylococcus pseudintermedius (9.56%), E. coli, and E. faecalis (both n = 11, 8.09%). Enterobacterales were mostly resistant to amoxicillin/clavulanic acid (68.3% strains), all Pseudomonas were resistant to ceftazidime, piperacillin/tazobactam, imipenem, and tylosin, Acinetobacter were mostly resistant to tylosin (55.5%), all Enterococcus were resistant to imipenem, and 39.2% of Staphylococci were resistant to clindamycin. Among ARGs, strA (streptomycin resistance), sul3 (sulfonamide resistance), and blaTEM, an extended-spectrum beta-lactamase determinant, were the most frequent. The risk of ARB and ARG transfer between animals and humans causes the need to search for new antimicrobial therapies in future veterinary medicine. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
24. Genetic Diversification and Resistome of Coagulase-Negative Staphylococci from Nostrils of Healthy Dogs and Dog-Owners in La Rioja, Spain.
- Author
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Abdullahi, Idris Nasir, Lozano, Carmen, González-Azcona, Carmen, Zarazaga, Myriam, and Torres, Carmen
- Subjects
DOGS ,MUPIROCIN ,DOG owners ,RIBOSOMAL proteins ,MULTIDRUG resistance ,CLINDAMYCIN ,SPECIES diversity - Abstract
Coagulase-negative staphylococci (CoNS) species in healthy dogs and their owners could be transferred between these hosts and carry diverse antimicrobial resistance (AMR) genes of public health concern. This study determined the frequency, diversity, and AMR genes of nasal CoNS from healthy dogs and in-contact people as well as the rate of intra-household (between healthy dogs and dog-owners) transmission of CoNS. Nasal samples were collected and processed from 34 dogs and 41 humans from 27 households, and CoNS identification was done by MALDI-TOF-MS. The AMR determinants and genetic lineages were determined by PCR/sequencing. A total of 216 CoNS isolates were initially obtained and identified, and the AMR phenotypes were determined. From these, 130 non-repetitive CoNS were selected (one isolate of each species per sample or more than one if they presented different AMR phenotypes) and further characterized. The predominant species from dog carriers were S. epidermidis (26.5%), S. hominis (8.8%), and S. cohnii (8.8%), whereas in the human carriers, the predominant ones were S. epidermidis (80.4%), S. lugdunensis (9.8%), and S. hominis (9.8%). Intra-host species diversity (>one CoNS species) was detected in 37.5% of dogs and 21.6% of dog-owners. Conversely, 50% of dogs and 70.3% of dog-owners had intra-species AMR diversity (2–4 AMR-CoNS profiles). About 20% were susceptible to all antimicrobial agents tested, 31.5% displayed a multidrug resistance phenotype, and 17.4% were mecA-positive, located in SCCmec type V (24.2%), III (18.1%), IVc (12.1%), and II (6.1%). The other mec-A positive CoNS isolates (39.5%) had non-typeable SCCmec. The highest AMR rates were found against erythromycin (32.3%/mph(C), msr(A)) and mupirocin (20.8%/mupA), but the resistance rates for other antimicrobial agents were <10% each. Remarkably, one linezolid-resistant S. epidermidis-ST35 isolate was identified and mediated by four amino acid substitutions in L3 and one in L4 ribosomal proteins. Dogs and dog-owners as carriers of S. epidermidis with similar AMR patterns and genetic lineages (ST59, ST61, ST166 and ST278) were detected in four households (14.8%). Diverse CoNS carriage and moderate level of AMR were obtained from this study. The detection of CoNS carrying diverse SCCmec elements and intra-species AMR diversity highlights the roles of dog ownership in the potential transmission of antimicrobial-resistant CoNS in either direction. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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25. Biofilm producing plant growth promoting bacteria in combination with glycine betaine uplift drought stress tolerance of maize plant.
- Author
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Yasmeen, Tahira, Arif, Muhammad Saleem, Tariq, Mohsin, Akhtar, Sadia, Syrish, Afira, Haidar, Waqas, Rizwan, Muhammad, Hussain, Muhammad Iftikhar, Ahmad, Ajaz, and Ali, Shafaqat
- Subjects
BETAINE ,DROUGHT tolerance ,PLANT growth ,PLANTING ,SUSTAINABILITY ,CORN - Abstract
Introduction: The escalating threat of drought poses a significant challenge to sustainable food production and human health, as water scarcity adversely impacts various aspects of plant physiology. Maize, a cornerstone in staple cereal crops, faces the formidable challenge of drought stress that triggers a series of transformative responses in the plant. Methods: The present study was carried out in two sets of experiments. In first experiment, drought stress was applied after maintaining growth for 45 days and then irrigation was skipped, and plant samples were collected at 1
st , 3rd and 6th day of drought interval for evaluation of changes in plant growth, water relation (relative water content) and antioxidants activity by inoculating indigenously isolated drought tolerant biofilm producing rhizobacterial isolates (Bacillus subtilis SRJ4, Curtobacterium citreum MJ1). In the second experiment, glycine betaine was applied as osmoregulator in addition to drought tolerant PGPR to perceive modulation in photosynthetic pigments (Chlorophyll a and b) and plant growth under varying moisture stress levels (100, 75 and 50% FC). Results and discussion: Results of the study revealed upsurge in root and shoot length, fresh and dry biomass of root and shoot besides increasing chlorophyll contents in water stressed inoculated plants compared to uninoculated plants. Glycine betaine application resulted in an additional boost to plant growth and photosynthetic pigments, when applied in combination with bacterial inoculants. However, both bacterial inoculants behaved differently under drought stress as evident from their biochemical and physiological attributes. Isolate SRJ4 proved to be superior for its potential to express antioxidant activity, leaf water potential and relative water contents and drought responsive gene expression while isolate MJ1 showed exclusive increase in root dry biomass and plant P contents. Though it is quite difficult to isolate the bacterial isolates having both plant growth promoting traits and drought tolerance together yet, such biological resources could be an exceptional option to be applied for improving crop productivity and sustainable agriculture under abiotic stresses. By exploring the combined application of PGPR and glycine betaine, the study seeks to provide insights into potential strategies for developing sustainable agricultural practices aimed at improving crop resilience under challenging environmental conditions. [ABSTRACT FROM AUTHOR]- Published
- 2024
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26. Emergence of multidrug-resistant Bacillus spp. derived from animal feed, food and human diarrhea in South-Eastern Bangladesh.
- Author
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Haque, Md Atiqul, Hu, Huilong, Liu, Jiaqi, Islam, Md Aminul, Hossen, Foysal, Rahman, Md Arifur, Ahmed, Firoz, and He, Cheng
- Subjects
BACILLUS (Bacteria) ,ANIMAL feeds ,MICROBIAL sensitivity tests ,ANTIMICROBIAL stewardship ,DRUG resistance in microorganisms ,FOOD crops ,P-glycoprotein - Abstract
Background: Antimicrobial resistance poses a huge risk to human health worldwide, while Bangladesh is confronting the most severe challenge between the food supply and the huge consumption of antibiotics annually. More importantly, probiotics containing Bacillus spp. are claimed to be an alternative to antimicrobial stewardship programs. However, their antibiotic resistance remains elusive. Thus, we employed the antimicrobial susceptibility test and PCR to assess the prevalence of resistance, including multidrug resistance (MDR) and resito-genotyping of isolated Bacillus spp. Results: The phenotypic profile showed that Bacillus spp. were 100% sensitive to gentamicin (2 µg/mL), whereas lowered sensitivity to levofloxacin (67.8%, 0.5–1 µg/mL), ciprofloxacin (62.3%, 0.5–1 µg/mL), clindamycin (52.2%, 0.25–0.5 µg/mL), amoxicillin-clavulanic acid (37.6%, 0.06 µg/mL), azithromycin (33.4%, 1–2 µg/mL), tetracycline (25.6%, 2–4 µg/mL), nitrofurantoin (21.1%, 16–32 µg/mL), co-trimoxazole (19.2%, 2 µg/mL), and erythromycin (18.8%, 0.25–0.5 µg/mL). The strains were completely resistant to penicillin, amoxicillin-clavulanic acid, cefixime, ceftriaxone, vancomycin, and co-trimoxazole, and a species-specific trend was seen in both phenotypic and genotypic resistance patterns. Genotypic resistance indicated prevalence of the bla1 (71.5%), tetA (33%), erm1 (27%), bla
TEM (13.1%), blaCTX-M-1 /blaCTX-M-2 /sul1 (10.1%), blaSHV (9.6%), and qnrS (4.1%) genes. The β-lactamase resistance gene bla1 was found in all penicillin-resistant (MIC ≥ 32 µg/mL) Bacillus spp. One hundred ninety-one isolates (89.6%) were MDR, with 100% from diarrhea, 90.3% from food, and 88.7% from animal feed. Conclusion: Based on the MIC value and profile analysis of antibiotic resistance genes, this is the first study that Bacillus spp. antimicrobial susceptibilities have been identified in Bangladesh, and our study will shed light on the adverse effects of feed-borne Bacillus spp. emerging from animal feed to the food chain. A comprehensive investigation is urgently needed by policymakers on tolerance limits and harmful effects in the animal industry. [ABSTRACT FROM AUTHOR]- Published
- 2024
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27. The gut microbiota of wild birds undergoing rehabilitation as a reservoir of multidrug-resistant enterococci in a metropolitan area in Brazil.
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Freitas AAR, Faria AR, Mendes LT, Merquior VLC, Neves DM, Pires JR, and Teixeira LM
- Abstract
Enterococci are ubiquitous usually commensal bacteria that can act as opportunistic pathogens frequently associated with resistance to multiple antimicrobial classes. A variety of animals may carry potentially harmful enterococci. In the present work, the occurrence and characteristics of enterococci recovered from the fecal microbiota of wild birds belonging to four families (Accipitridae, Cathartidae, Falconidae and Strigidae) were investigated. Enterococci were recovered from 104 (92.0%) fecal samples obtained from 113 birds, and 260 strains were selected for additional characterization. Enterococcus faecalis was the predominant species (63.8%), followed by Enterococcus hirae (16.2%), Enterococcus faecium (11.5%), Enterococcus gallinarum (5.4%), Enterococcus avium (1.5%), Enterococcus casseliflavus (0.8%), and Enterococcus raffinosus and Enterococcus cecorum (0.4% each). Major percentages (11.9% 75.0%) of nonsusceptibility were observed to quinolones (particularly to enrofloxacin), erythromycin, rifampin, nitrofurantoin, tetracycline and streptomycin. Gentamicin and ampicillin resistances (13.3% each) were only detected among E. faecium. A total of 133 (51.2%) strains were MDR, showing a large variety of MDR profiles, composed by simultaneous resistance encompassing 3 to 12 antimicrobials. MDR strains were found in 68.2% of the birds. Antimicrobial resistance was associated with the presence of the aac(6')-aph(2″)-Ia, aph(2″)-Id, ant(6)-Ia, ant(9)-Ia, ant(9)-Ib, tet(M), tet(L), tet(S), erm(B), mef(A/E), msrC, and vat(D) genes. The most common virulence genes were efaA, gelE, ace, eeP, and asa1. PFGE analysis revealed a large genetic diversity among most of the strains. MLST performed for 35 E. faecalis strains revealed 23 different STs, whereas 14 STs were found among 18 E. faecium strains. Hospital-associated lineages ST22, ST25, ST56, ST1274 were identified. The results show that the wild birds investigated can carry a diversity of potentially hazardous enterococcal strains displaying multiple antimicrobial resistance and virulence genes, reinforcing the assumption that these animals provide an important target to monitor the circulation of microorganisms that deserve consideration under the One Health perspective., (© 2024. The Author(s) under exclusive licence to Sociedade Brasileira de Microbiologia.)
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- 2024
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28. Development and validation of multiplex real-time PCR for simultaneous detection of six bacterial pathogens causing lower respiratory tract infections and antimicrobial resistance genes.
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Dung, Tran Thi Ngoc, Phat, Voong Vinh, Vinh, Chau, Lan, Nguyen Phu Huong, Phuong, Nguyen Luong Nha, Ngan, Le Thi Quynh, Thwaites, Guy, Thwaites, Louise, Rabaa, Maia, Nguyen, Anh T. K., and Duy, Pham Thanh
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RESPIRATORY infections ,KLEBSIELLA pneumoniae ,DRUG resistance in microorganisms ,ACINETOBACTER baumannii ,AIRWAY resistance (Respiration) ,ESCHERICHIA coli ,BETA lactamases ,MIXED infections ,PATHOGENIC microorganisms - Abstract
Background: Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, Escherichia coli, Streptococcus pneumoniae and Staphylococcus aureus are major bacterial causes of lower respiratory tract infections (LRTIs) globally, leading to substantial morbidity and mortality. The rapid increase of antimicrobial resistance (AMR) in these pathogens poses significant challenges for their effective antibiotic therapy. In low-resourced settings, patients with LRTIs are prescribed antibiotics empirically while awaiting several days for culture results. Rapid pathogen and AMR gene detection could prompt optimal antibiotic use and improve outcomes. Methods: Here, we developed multiplex quantitative real-time PCR using EvaGreen dye and melting curve analysis to rapidly identify six major pathogens and fourteen AMR genes directly from respiratory samples. The reproducibility, linearity, limit of detection (LOD) of real-time PCR assays for pathogen detection were evaluated using DNA control mixes and spiked tracheal aspirate. The performance of RT-PCR assays was subsequently compared with the gold standard, conventional culture on 50 tracheal aspirate and sputum specimens of ICU patients. Results: The sensitivity of RT-PCR assays was 100% for K. pneumoniae, A. baumannii, P. aeruginosa, E. coli and 63.6% for S. aureus and the specificity ranged from 87.5% to 97.6%. The kappa correlation values of all pathogens between the two methods varied from 0.63 to 0.95. The limit of detection of target bacteria was 1600 CFU/ml. The quantitative results from the PCR assays demonstrated 100% concordance with quantitative culture of tracheal aspirates. Compared to culture, PCR assays exhibited higher sensitivity in detecting mixed infections and S. pneumoniae. There was a high level of concordance between the detection of AMR gene and AMR phenotype in single infections. Conclusions: Our multiplex quantitative RT-PCR assays are fast and simple, but sensitive and specific in detecting six bacterial pathogens of LRTIs and their antimicrobial resistance genes and should be further evaluated for clinical utility. [ABSTRACT FROM AUTHOR]
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- 2024
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29. Microbiological Quality and Antimicrobial Resistance of Commercial Probiotic Products for Food-Producing Animals.
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Tran, Hoang My, Prathan, Rangsiya, Hein, Si Thu, and Chuanchuen, Rungtip
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ANIMAL products ,DRUG resistance in microorganisms ,FOOD animals ,PROBIOTICS ,ESCHERICHIA coli ,SALMONELLA enterica serovar Typhi ,MICROBIOLOGICAL synthesis ,FISH microbiology - Abstract
Probiotics have been popularly used in livestock production as an alternative to antibiotics. This study aimed to investigate the microbiological quality and phenotypic and genotypic antimicrobial resistance of bacteria in probiotic products sold for food animals. A total of 45 probiotic products were examined for the number of viable cells, species, and antimicrobial susceptibility; the contamination of Escherichia coli and Salmonella; and the presence of 112 genes encoding resistance to clinically important antimicrobials and transferability of AMR determinants. The results showed that 29 of 45 products (64.4%) were incorrectly labeled in either number of viable cells or bacterial species. None of the tested products were contaminated with E. coli and Salmonella. A total of 33 out of 64 bacterial isolates (51.6%) exhibited resistance to at least one antimicrobial agent. Of the 45 products tested, 16 (35.5%) carried AMR genes. Almost all AMR genes detected in probiotic products were not correlated to the AMR phenotype of probiotic strains formulated in the products. Three streptomycin-resistant Lactobacillus isolates could horizontally transfer their AMR determinants. The findings demonstrated that the probiotic products could serve as reservoirs for the spread of AMR genes and may not yield benefits to animals as claimed. The need for the adequate quality control of probiotic products is highlighted. [ABSTRACT FROM AUTHOR]
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- 2024
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30. Genetic diversity of macrolides resistant Staphylococcus aureus clinical isolates and the potential synergistic effect of vitamins, C and K3.
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El-Banna, Tarek El-Said, Sonbol, Fatma Ibrahim, Kamer, Amal M. Abo, and Badr, Sara Ahmed Mohammed Mahmoud
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STAPHYLOCOCCUS aureus ,MUPIROCIN ,GENETIC variation ,MACROLIDE antibiotics ,STAPHYLOCOCCUS aureus infections ,VITAMIN C ,MASTITIS - Abstract
Background: Macrolide antibiotics have been extensively used for the treatment of Staphylococcus aureus infections. However, the emergence of macrolide-resistant strains of S. aureus has become a major concern for public health. The molecular mechanisms underlying macrolide resistance in S. aureus are complex and diverse, involving both target site modification and efflux pump systems. In this study, we aim to overcome the molecular diversity of macrolide resistance mechanisms in S. aureus by identifying common molecular targets that could be exploited for the development of novel therapeutics. Methods: About 300 Staphylococcus aureus different isolates were recovered and purified from 921 clinical specimen including urine (88), blood (156), sputum (264), nasal swabs (168), pus (181) and bone (39) collected from different departments in Tanta University Hospital. Macrolide resistant isolates were detected and tested for Multi Drug Resistant (MDR). Gel electrophoresis was performed after the D test and PCR reaction for erm(A), (B), (C), msr(A), and mph(C) genes. Finally, we tried different combinations of Erythromycin or Azithromycin antibiotics with either vitamin K
3 or vitamin C. Results: Macrolide resistance S. aureus isolates exhibited 7 major resistance patterns according to number of resistance markers and each pattern included sub patterns or subgroups. The PCR amplified products of different erm genes; analysis recorded different phenotypes of the Staphylococcus aureus isolates according to their different genotypes. In addition, our new tested combinations of Erythromycin and vitamin C, Erythromycin, and vitamin K3 , Azithromycin and vitamin C and Azithromycin and vitamin K3 showed significant antibacterial effect when using every antibiotic alone. Our findings provide new insights into the molecular mechanisms of macrolide resistance in S. aureus and offer potential strategies for the development of novel protocols to overcome this emerging public health threat. [ABSTRACT FROM AUTHOR]- Published
- 2024
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31. Assays to detect and characterize human immunodeficiency virus type 1 (HIV-1) receptor antagonists, compounds that inhibit binding of the HIV-1 surface glycoprotein, gp120, to the CD4 receptor on human T lymphocytes
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Clancy, J., Taitkamradt, A., Petitpas, J., Manousos, M., Mcguirk, P.R., Subashi, T., Watts, P., and Wondrack, L.
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Immunoassay -- Usage ,Protein binding -- Research - Abstract
According to the authors' abstract of an article published in Antimicrobial Agents and Chemotherapy, "Human immunodeficiency virus type 1 infects human helper T lymphocytes by an interaction between gp120, the [...]
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- 1994
32. Enzymatic treatment of brown coal following ionic liquid pretreatment.
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Zhao, Hua and Baker, Gary A.
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LIGNITE ,ENZYMATIC browning ,IONIC liquids ,ENERGY consumption ,ALCOHOL dehydrogenase ,HORSERADISH peroxidase ,LACCASE ,OXIDOREDUCTASES - Abstract
As a low-rank coal, lignite (brown coal) is usually well treated by chemical or enzymatic methods prior to its utilization for energy and materials. Following ionic liquids (ILs)-pretreatment, this study focuses on the treatment of lignite by oxidoreductase-type of enzymes including horseradish peroxidase (HRP), alcohol dehydrogenase (ADH), and laccase. We observed some synergistic effects of IL-pretreatment and enzymatic actions on lignite coal. The combination of IL-pretreatment and HRP-/ADH-treatment enabled smaller and more uniform coal particles than IL-pretreatment alone or that without HRP. However, laccase-treatment led to large coal aggregates likely due to the crosslinking effect. Both HRP- and ADH-treatments induced a lower aliphatic and a higher aromatic content of lignite, particularly when the coal was pretreated by an IL prior to the enzymatic process. Both ADH- and laccase-treatments produced more hydrogen bonds in the coal. Therefore, the combined treatments of lignite by ILs and oxidoreductases dedicate low-rank coal structures. [ABSTRACT FROM AUTHOR]
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- 2023
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33. Emerging threat of antimicrobial resistance in Neisseria gonorrhoeae: pathogenesis, treatment challenges, and potential for vaccine development.
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Omeershffudin, Umairah Natasya Mohd and Kumar, Suresh
- Abstract
The continuous rise of antimicrobial resistance (AMR) is a serious concern as it endangers the effectiveness of healthcare interventions that rely on antibiotics in the long run. The increasing resistance of Neisseria gonorrhoeae, the bacteria responsible for causing gonorrhea, to commonly used antimicrobial drugs, is a major concern. This has now become a critical global health crisis. In the coming years, there is a risk of a hidden epidemic caused by the emergence of gonococcal AMR. This will worsen the global situation. Infections caused by N. gonorrhoeae were once considered easily treatable. However, over time, they have become increasingly resistant to commonly used therapeutic medications, such as penicillin, ciprofloxacin, and azithromycin. As a result, this pathogen is developing into a true “superbug,” which means that ceftriaxone is now the only available option for initial empirical treatment. Effective management strategies are urgently needed to prevent severe consequences, such as infertility and pelvic inflammatory disease, which can result from delayed intervention. This review provides a thorough analysis of the escalating problem of N. gonorrhoeae, including its pathogenesis, current treatment options, the emergence of drug-resistant mechanisms, and the potential for vaccine development. We aim to provide valuable insights for healthcare practitioners, policymakers, and researchers in their efforts to combat N. gonorrhoeae antibiotic resistance by elucidating the multifaceted aspects of this global challenge. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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34. Antimicrobial Susceptibility to 27 Drugs and the Molecular Mechanisms of Macrolide, Tetracycline, and Quinolone Resistance in Gemella sp.
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Furugaito, Michiko, Arai, Yuko, Uzawa, Yutaka, Kamisako, Toshinori, Ogura, Kohei, Okamoto, Shigefumi, and Kikuchi, Ken
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ENTEROCOCCUS ,TETRACYCLINES ,TETRACYCLINE ,MICROBIAL sensitivity tests ,INFECTIVE endocarditis ,ERYTHROMYCIN ,DRUGS ,ENTEROCOCCAL infections - Abstract
Gemella is a catalase-negative, facultative anaerobic, Gram-positive coccus that is commensal in humans but can become opportunistic and cause severe infectious diseases, such as infective endocarditis. Few studies have tested the antimicrobial susceptibility of Gemella. We tested its antimicrobial susceptibility to 27 drugs and defined the resistant genes using PCR in 58 Gemella strains, including 52 clinical isolates and six type strains. The type strains and clinical isolates included 22 G. morbillorum, 18 G. haemolysans (GH) group (genetically indistinguishable from G. haemolysans and G. parahaemolysans), 13 G. taiwanensis, three G. sanguinis, and two G. bergeri. No strain was resistant to beta-lactams and vancomycin. In total, 6/22 (27.3%) G. morbillorum strains were erythromycin- and clindamycin-resistant ermB-positive, whereas 4/18 (22.2%) in the GH group, 7/13 (53.8%) G. taiwanensis, and 1/3 (33.3%) of the G. sanguinis strains were erythromycin-non-susceptible mefE- or mefA-positive and clindamycin-susceptible. The MIC
90 of minocycline and the ratios of tetM-positive strains varied across the different species—G. morbillorum: 2 µg/mL and 27.3% (6/22); GH group: 8 µg/mL and 27.8% (5/18); G. taiwanensis: 8 µg/mL and 46.2% (6/13), respectively. Levofloxacin resistance was significantly higher in G. taiwanensis (9/13 69.2%) than in G. morbillorum (2/22 9.1%). Levofloxacin resistance was associated with a substitution at serine 83 for leucine, phenylalanine, or tyrosine in GyrA. The mechanisms of resistance to erythromycin and clindamycin differed across Gemella species. In addition, the rate of susceptibility to levofloxacin differed across Gemella sp., and the quinolone resistance mechanism was caused by mutations in GyrA alone. [ABSTRACT FROM AUTHOR]- Published
- 2023
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35. Within-Host Diversity of Coagulase-Negative Staphylococci Resistome from Healthy Pigs and Pig Farmers, with the Detection of cfr- Carrying Strains and MDR- S. borealis.
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Abdullahi, Idris Nasir, Lozano, Carmen, Simón, Carmen, Zarazaga, Myriam, and Torres, Carmen
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SWINE ,STAPHYLOCOCCUS ,SWINE farms ,MULTIDRUG resistance ,SPECIES diversity ,CONTACT tracing - Abstract
The ecology and diversity of resistome in coagulase-negative staphylococci (CoNS) from healthy pigs and pig farmers are rarely available as most studies focused on the livestock-associated methicillin-resistant S. aureus. This study aims to characterize the antimicrobial resistance (AMR) mechanisms, intra-host species diversity (more than one species in a host), and intra-species AMR diversity (same species with more than one AMR profile) in CoNS recovered from the nasal cavities of healthy pigs and pig farmers. One-hundred-and-one CoNS strains previously recovered from 40 pigs and 10 pig farmers from four Spanish pig farms were tested to determine their AMR profiles. Non-repetitive strains were selected (n = 75) and their AMR genes, SCCmec types, and genetic lineages were analyzed by PCR/sequencing. Of the non-repetitive strains, 92% showed a multidrug resistance (MDR) phenotype, and 52% were mecA-positive, which were associated with SCCmec types V (46.2%), IVb (20.5%), and IVc (5.1%). A total of 28% of the pigs and pig farmers had intra-host species diversity, while 26% had intra-species AMR diversity. High repertoires of AMR genes were detected, including unusual ones such as tetO, ermT, erm43, and cfr. Most important was the detection of cfr (in S. saprophyticus and S. epidermidis-ST16) in pigs and pig farmers; whereas MDR-S. borealis strains were identified in pig farmers. Pig-to-pig transmission of CoNS with similar AMR genes and SCCmec types was detected in 42.5% of pigs. The high level of multidrug, within-host, and intra-species resistome diversity in the nasal CoNS highlights their ability to be AMR gene reservoirs in healthy pigs and pig farmers. The detection of MDR-S. borealis and linezolid-resistant strains underscore the need for comprehensive and continuous surveillance of MDR-CoNS at the pig farm level. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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36. Decreased susceptibility to vancomycin and other mechanisms of resistance to antibiotics in Staphylococcus epidermidis as a therapeutic problem in hospital treatment.
- Author
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Szemraj, Magdalena, Glajzner, Paulina, and Sienkiewicz, Monika
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STAPHYLOCOCCUS epidermidis ,MULTIDRUG resistance in bacteria ,LINEZOLID ,DRUG resistance in bacteria ,VANCOMYCIN ,VANCOMYCIN resistance ,STAPHYLOCOCCUS ,ENTEROCOCCUS - Abstract
Multidrug-resistant coagulase-negative staphylococci represent a real therapeutic challenge. The aim of the study was to emphasize the importance of heteroresistance to vancomycin presence in methicillin-resistant strains of S. epidermidis. The research comprised 65 strains of S. epidermidis. Heteroresistance to vancomycin was detected with the use of the agar screening method with Brain Heart Infusion and a population profile analysis (PAP test). In addition, types of cassettes and genes responsible for resistance to antibiotics for 22 multidrug resistant strains were determined. Our investigations showed that 56 of 65 S. epidermidis strains were phenotypically resistant to methicillin. The tested strains were mostly resistant to erythromycin, gentamicin, clindamycin, and ciprofloxacin. Six strains showed decreased susceptibility to vancomycin and their heterogeneous resistance profiles were confirmed with the PAP test. All tested multi-resistant strains exhibited the mecA gene. More than half of them possessed type IV cassettes. ant(4′)-Ia and aac(6′)/aph(2′′), ermC and tetK genes were most commonly found. The described phenomenon of heteroresistance to vancomycin in multidrug resistant bacteria of the Staphylococcus genus effectively inhibits a therapeutic effect of treatment with this antibiotic. That is why it is so important to search for markers that will enable to identify heteroresistance to vancomycin strains under laboratory conditions. [ABSTRACT FROM AUTHOR]
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- 2023
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37. Analysis of Antibiotic-Resistant and Virulence Genes of Enterococcus Detected in Calf Colostrum—One Health Perspective.
- Author
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Cunha, Sandra, Miranda, Carla, Martins, Ângela, Soares, Rúben, Maia, Manuel, Silva, Filipe, Igrejas, Gilberto, and Poeta, Patrícia
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ENTEROCOCCUS ,COLOSTRUM ,ENTEROCOCCUS faecalis ,MICROBIAL contamination ,CALVES ,GENES - Abstract
Simple Summary: Enterococci are among the most responsible agents for nosocomial infections and are globally prevalent antibiotic-resistant microorganisms. The risk of calves being fed colostrum contaminated with these bacteria or antimicrobial-resistant bacteria, leading to the colonization of their gastrointestinal tract, is a concern of public health. The objective of this study was to investigate whether bovine colostrum can act as a reservoir and vehicle for the dissemination of antibiotic-resistant Enterococcus spp. via the food chain. The sensitivity to 14 antibiotics using the disk diffusion method, as well as the presence of antibiotic-resistant genes and virulence genes, were analyzed in calf colostrum samples. E. faecalis, E. faecium and E. gallinarum were identified in the colostrum samples. The results demonstrated a very high percentage (92.1%) of isolates classified as multidrug-resistant (≥3 antimicrobial classes). Additionally, 52% of the isolates showed the presence of ≥4 virulence genes. E. faecium was most likely to carry erythromycin and tetracycline resistance genes, as well as virulence genes. This study revealed that colostrum serves as a reservoir and/or vehicle for the spread of antibiotic resistance and virulence genes. These results have to be analyzed in a One Health perspective to better combat this spread to humans, other animals and the environment. Enterococci are considered among the most prevalent global multidrug-resistant microorganisms globally. Their dissemination is a global concern, particularly by food-producing animals for both animals and humans. The aim of this study was to identify the species and investigate the antibiotic resistance and virulence profile of Enterococcus in bovine colostrum. Out of 88 presumptive Enterococcus isolates, species identification and susceptibility to 14 antimicrobials were tested using the disk diffusion method. An analysis of the antibiotic resistance and virulence genes was performed on the most prevalent species, using specific PCR assays. Enterococcus faecalis (54.5%), E. faecium (14.8%) and E. gallinarum (6.8%) were the identified species. To the best of our knowledge, this is the first report of E. gallinarum in bovine colostrum. The majority of the isolates showed resistance to quinupristin-dalfopristin (95.9%), erythromycin (80.7%), tetracycline (80.7%) and streptomycin (58%). Ninety-two percent of isolates were classified as multidrug-resistant. The most frequently detected resistance genes were tet(K) (61.1%), tet(M) (75.9%), tet(L) (90.7%), erm(B) (55.6%) and ant(6)-Ia (46.3%). The most prevalent virulence factors were cpd, esp, agg and cylL
L . Enterococcus faecium showed a higher probability of carrying the erm(C), tet(M), ace and gel(E) genes (p < 0.05). These results demonstrated that colostrum can constitute an important reservoir and vehicle for the dissemination of antibiotic resistance and virulence genes to the three niches included in a One Health perspective (humans, animals and the environment), highlighting the importance of hygiene sanitary measures to mitigate colostrum microbial contamination. [ABSTRACT FROM AUTHOR]- Published
- 2023
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38. Phenotypic and Genotypic Characterization of the Virulence Factors and Antimicrobial Resistance of Enterobacteriaceae Isolates Associated with Clinical Mastitis in Dairy Cattle.
- Author
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Ancuelo, Amily E. and Perez, Rodney H.
- Subjects
BOVINE mastitis ,DAIRY cattle ,DRUG resistance in microorganisms ,ENTEROBACTERIACEAE ,GENOTYPES ,CLINDAMYCIN ,EXOTOXIN - Abstract
Mastitis is a prevalent disease in dairy cattle. One of its important etiological agents is the species belonging to the Enterobacteriaceae family. Thus, this study aims to characterize the virulence and multi-drug resistance (MDR) profiles of Enterobacteriaceae strains previously isolated from dairy cattle with clinical mastitis in Region 4-A, Philippines. Results showed that 60% of Klebsiella pneumoniae and 100% of the Proteeae tribe (Proteus spp., Providencia spp., and Morganella spp.) exhibited hemolytic activity. Hemolysin-coding gene, viz. hpmA, was suspected to contribute to the hemolytic activity of all Proteus spp. Biofilm formation was observed in several isolates and mrkD, ireA, ucaA, atfA, and ureG genes were expected to be accountable for this virulence trait. All Enterobacteriaceae strains were classified as MDR pathogens. All isolates exhibited resistance to erythromycin, penicillin, clindamycin, and lincomycin. Resistance to streptomycin and tetracycline was also exhibited by a significant number of isolates and the resistance genes (rrs and tetK) responsible for this resistance were most frequently detected. Only one isolate of M. morganii harbored integron-related gene intI2. The characterization of these strains has significant health and economic implications. Severe virulence and drug resistance of these strains pose a challenge in the management and treatment of intramammary infections in dairy farms. Being reservoirs of antimicrobial resistance-associated genes, these strains pose a threat to the food chain. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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39. Evaluation of Enterotoxins and Antimicrobial Resistance in Microorganisms Isolated from Raw Sheep Milk and Cheese: Ensuring the Microbiological Safety of These Products in Southern Brazil.
- Author
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Endres, Creciana M., Moreira, Eliana, de Freitas, Andressa B., Castel, Andréia P. Dal, Graciano, Fábio, Mann, Michele B., Frazzon, Ana Paula G., Mayer, Fabiana Q., and Frazzon, Jeverson
- Subjects
RAW milk ,DRUG resistance in microorganisms ,ENTEROTOXINS ,PRODUCT safety ,CHEESE ,SHEEP milk - Abstract
This study emphasizes the importance of monitoring the microbiological quality of animal products, such as raw sheep's milk and cheese, to ensure food safety. In Brazil, there is currently no legislation governing the quality of sheep's milk and its derivatives. Therefore, this study aimed to evaluate: (i) the hygienic-sanitary quality of raw sheep's milk and cheese produced in southern Brazil; (ii) the presence of enterotoxins and Staphylococcus spp. in these products; and (iii) the susceptibility of the isolated Staphylococcus spp. to antimicrobial drugs and the presence of resistance genes. A total of 35 samples of sheep's milk and cheese were examined. The microbiological quality and presence of enterotoxins were accessed using Petrifilm and VIDAS SET2 methods, respectively. Antimicrobial susceptibility tests were conducted using VITEK 2 equipment and the disc diffusion method. The presence of resistance genes tet(L), sul1, sul2, ermB, tetM, AAC(6)', tetW, and strA were evaluated through PCR. In total, 39 Staphylococcus spp. were obtained. The resistance genes tetM, ermB, strA, tetL, sul1, AAC(6)', and sul2 were detected in 82%, 59%, 36%, 28%, 23%, 3%, and 3% of isolates, respectively. The findings revealed that both raw sheep's milk and cheese contained Staphylococcus spp. that exhibited resistance to antimicrobial drugs and harbored resistance genes. These results underscore the immediate need for specific legislation in Brazil to regulate the production and sale of these products. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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40. ARGs Detection in Listeria Monocytogenes Strains Isolated from the Atlantic Salmon (Salmo salar) Food Industry: A Retrospective Study.
- Author
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Ferri, Gianluigi, Lauteri, Carlotta, Festino, Anna Rita, and Vergara, Alberto
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ATLANTIC salmon ,LISTERIA monocytogenes ,SCIENTIFIC literature ,FOOD industry ,VETERINARY medicine ,RETROSPECTIVE studies - Abstract
Among bacterial foodborne pathogens, Listeria monocytogenes represents one of the most important public health concerns in seafood industries. This study was designed as a retrospective study which aimed to investigate the trend of antibiotic resistance genes (ARGs) circulation in L. monocytogenes isolates identified (in the last 15 years) from Atlantic salmon (Salmo salar) fresh and smoked fillets and environmental samples. For these purposes, biomolecular assays were performed on 120 L. monocytogenes strains collected in certain years and compared to the contemporary scientific literature. A total of 52.50% (95% CI: 43.57–61.43%) of these samples were resistant to at least one antibiotic class, and 20.83% (95% CI: 13.57–28.09%) were classified as multidrug resistant. Concerning ARGs circulation, tetracycline (tetC, tetD, tetK, tetL, tetS), aminoglycoside (aadA, strA, aacC2, aphA1, aphA2), macrolide (cmlA1, catI, catII), and oxazolidinone (cfr, optrA, poxtA) gene determinants were majorly amplified. This study highlights the consistent ARGs circulation from fresh and processed finfish products and environmental samples, discovering resistance to the so-called critical important antimicrobials (CIA) since 2007. The obtained ARGs circulation data highlight the consistent increase in their diffusion when compared to similar contemporary investigations. This scenario emerges as the result of decades of improper antimicrobial administration in human and veterinary medicine. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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41. Antibiotic Resistance of Enterococcus Species in Ornamental Animal Feed.
- Author
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Soares, Rúben, Miranda, Carla, Cunha, Sandra, Ferreira, Luís, Martins, Ângela, Igrejas, Gilberto, and Poeta, Patrícia
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DRUG resistance in bacteria ,ANIMAL feeds ,ENTEROCOCCUS ,ANIMAL species ,ENTEROCOCCUS faecalis ,ORNAMENTAL plants - Abstract
Simple Summary: Numerous studies have already reported the presence of different antibiotic-resistant Enterococcus species in food-producing animals, animal products and pet food. However, studies specifically evaluating antimicrobial resistance in Enterococcus spp. in ornamental animals and their food are scarce. Therefore, this study aimed to identify Enterococcus spp. and their antibiotic-resistant patterns in ornamental animal feed, as this could lead to the spread of antimicrobial resistance to humans due to their close contact with these animals. Enterococcus is a bacterial genus that is strongly associated with nosocomial infections and has a high capacity to transfer and acquire resistance genes. In this study, the main objective was to evaluate the presence of Enterococcus species in ornamental animal feed and characterize their antimicrobial resistance and virulence factors. Antimicrobial susceptibility was determined using 14 antimicrobial agents by the disk diffusion method, complemented by genotypic analysis to identify Enterococcus species and the presence of 14 antimicrobial resistance and 10 virulence genes. From 57 samples of ornamental animal feed, 103 Enterococcus isolates were recovered from 15 bird, 9 fish and 4 reptile feed samples. Enterococcus isolates were highly resistance to rifampicin (78%) and erythromycin (48%), and 48% of isolates were classified as multidrug-resistant. Enterococcus faecalis (36.7%) and E. faecium (31.7%) were the species most frequently identified. Most isolates carried the resistance genes ermB (57%) and tetL (52%) and the virulence genes, cylL (52%) and esp (40%). Enterococcus gallinarum was the species with the highest number of multidrug-resistant isolates (50%) and virulence genes (80%). These results highlight the high levels of antibiotic-resistant Enterococcus spp. present in ornamental animal feed and the growing interaction of these animals with humans as a public health concern. [ABSTRACT FROM AUTHOR]
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- 2023
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42. Determination of the Prevalence and Antimicrobial Resistance of Enterococcus faecalis and Enterococcus faecium Associated with Poultry in Four Districts in Zambia.
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Mwikuma, Grace, Kainga, Henson, Kallu, Simegnew Adugna, Nakajima, Chie, Suzuki, Yasuhiko, and Hang'ombe, Bernard Mudenda
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ENTEROCOCCUS ,ENTEROCOCCUS faecalis ,ENTEROCOCCUS faecium ,DRUG resistance in microorganisms ,POULTRY ,PATHOGENIC bacteria - Abstract
The presence of antimicrobial-resistant Enterococci in poultry is a growing public health concern worldwide due to its potential for transmission to humans. The aim of this study was to determine the prevalence and patterns of antimicrobial resistance and to detect drug-resistant genes in Enterococcus faecalis and E. faecium in poultry from four districts in Zambia. Identification of Enterococci was conducted using phenotypic methods. Antimicrobial resistance was determined using the disc diffusion method and antimicrobial resistance genes were detected using polymerase chain reaction and gene-specific primers. The overall prevalence of Enterococci was 31.1% (153/492, 95% CI: 27.1–35.4). Enterococcus faecalis had a significantly higher prevalence at 37.9% (58/153, 95% CI: 30.3–46.1) compared with E. faecium, which had a prevalence of 10.5% (16/153, 95% CI: 6.3–16.7). Most of the E. faecalis and E. faecium isolates were resistant to tetracycline (66/74, 89.2%) and ampicillin and erythromycin (51/74, 68.9%). The majority of isolates were susceptible to vancomycin (72/74, 97.3%). The results show that poultry are a potential source of multidrug-resistant E. faecalis and E. faecium strains, which can be transmitted to humans. Resistance genes in the Enterococcus species can also be transmitted to pathogenic bacteria if they colonize the same poultry, thus threatening the safety of poultry production, leading to significant public health concerns. [ABSTRACT FROM AUTHOR]
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- 2023
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43. Suppressed distribution of protein A on the surface of Staphylococcus aureus as a morphological characteristic of erythromycin-resistant strain.
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Okabe K, Chikasue K, Murakami K, Matsuda N, and Yamada S
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- Microbial Sensitivity Tests, Enzyme-Linked Immunosorbent Assay, Polymerase Chain Reaction, Transcription, Genetic, Microscopy, Electron, Transmission, Staphylococcus aureus cytology, Staphylococcus aureus drug effects, Staphylococcus aureus metabolism, Erythromycin pharmacology, Drug Resistance, Bacterial, Bacterial Proteins metabolism, Cell Wall chemistry, Cell Wall metabolism
- Abstract
To identify a new morphological phenotype of erythromycin (EM)-resistant Staphylococcus aureus (S. aureus) were isolated in vitro from EM-sensitive parent strain, and the distribution of staphylococcus specific protein A (SpA) on the surface of these strains was examined morphologically by using applied immunoelectron microscopy. The isolated EM-resistant strains had thickened cell walls, and the distribution of SpA on the surfaces of these strains was demonstrated to be lower than that of the parent strain. The SpA suppression was confirmed by enzyme-linked immunosorbent assay (ELISA) using fixed EM-resistant cells. Moreover, the spa gene of EM-resistant cells was detected by polymerase chain reaction (PCR) and confirmed by quantitative real-time PCR assay, showing that the expression of SpA was repressed at the transcriptional level in these strains. Furthermore, ELISA assay showed that whole EM-resistant cell SpA content was significantly decreased. Therefore, it was considered that the suppression of surface SpA on the EM-resistant strain was due to regulated SpA production, and not dependent on the conformational change in SpA molecule expression through cell wall thickening. These results strongly suggest that suppressed SpA distribution on the EM-resistant S. aureus is a phenotypical characteristic in these strains., (© 2024. The Author(s) under exclusive licence to The Japanese Society for Clinical Molecular Morphology.)
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- 2024
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44. Inhibition of Erythromycin and Erythromycin-Induced Resistance among Staphylococcus aureus Clinical Isolates.
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Mahfouz, Aya A., Said, Heba S., Elfeky, Sherin M., and Shaaban, Mona I.
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CLINDAMYCIN ,STAPHYLOCOCCUS aureus ,ERYTHROMYCIN ,NEOMYCIN ,OMEPRAZOLE ,DRUG resistance in bacteria - Abstract
The increasing incidence of erythromycin and erythromycin-induced resistance to clindamycin among Staphylococcus aureus (S. aureus) is a serious problem. Patients infected with inducible resistance phenotypes may fail to respond to clindamycin. This study aimed to identify the prevalence of erythromycin and erythromycin-induced resistance and assess for potential inhibitors. A total of 99 isolates were purified from various clinical sources. Phenotypic detection of macrolide-lincosamide-streptogramin B (MLS
B )-resistance phenotypes was performed by D-test. MLSB -resistance genes were identified using PCR. Different compounds were tested for their effects on erythromycin and inducible clindamycin resistance by broth microdilution and checkerboard microdilution methods. The obtained data were evaluated using docking analysis. Ninety-one isolates were S. aureus. The prevalence of constitutive MLSB , inducible MLSB , and macrolide-streptogramin (MS) phenotypes was 39.6%, 14.3%, and 2.2%, respectively. Genes including ermC, ermA, ermB, msrA, msrB, lnuA, and mphC were found in 82.6%, 5.8%, 7.7%, 3.8%, 3.8%, 13.5%, and 3.8% of isolates, respectively. Erythromycin resistance was significantly reduced by doxorubicin, neomycin, and omeprazole. Quinine, ketoprofen, and fosfomycin combated and reversed erythromycin/clindamycin-induced resistance. This study highlighted the significance of managing antibiotic resistance and overcoming clindamycin treatment failure. Doxorubicin, neomycin, omeprazole, quinine, ketoprofen, and fosfomycin could be potential inhibitors of erythromycin and inducible clindamycin resistance. [ABSTRACT FROM AUTHOR]- Published
- 2023
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45. Clinical Resistant Strains of Enterococci and Their Correlation to Reduced Susceptibility to Biocides: Phenotypic and Genotypic Analysis of Macrolides, Lincosamides, and Streptogramins.
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Abu Lila, Amr Selim, Alharby, Tareq Nafea, Alanazi, Jowaher, Alanazi, Muteb, Abdallah, Marwa H., Rizvi, Syed Mohd Danish, Moin, Afrasim, Khafagy, El-Sayed, Tabrez, Shams, Al Balushi, Abdullah Ali, and Hegazy, Wael A. H.
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ENTEROCOCCUS ,BIOCIDES ,MACROLIDE antibiotics ,GENOTYPES ,PHENOTYPES ,GRAM-positive bacteria - Abstract
Enterococci are troublesome nosocomial, opportunistic Gram-positive cocci bacteria showing enhanced resistance to many commonly used antibiotics. This study aims to investigate the prevalence and genetic basis of antibiotic resistance to macrolides, lincosamides, and streptogramins (MLS) in Enterococci, as well as the correlation between MLS resistance and biocide resistance. From 913 clinical isolates collected from King Khalid Hospital, Hail, Saudi Arabia, 131 isolates were identified as Enterococci spp. The susceptibility of the clinical enterococcal isolates to several MLS antibiotics was determined, and the resistance phenotype was detected by the triple disk method. The MLS-involved resistance genes were screened in the resistant isolates. The current results showed high resistance rates to MLS antibiotics, and the constitutive resistance to all MLS (cMLS) was the most prevalent phenotype, observed in 76.8% of resistant isolates. By screening the MLS resistance-encoding genes in the resistant isolates, the erythromycin ribosome methylase (erm) genes that are responsible for methylation of bacterial 23S rRNA were the most detected genes, in particular, ermB. The ereA esterase-encoding gene was the most detected MLS modifying-encoding genes, more than lnuA (adenylation) and mphC (phosphorylation). The minimum inhibitory concentrations (MICs) of commonly used biocides were detected in resistant isolates and correlated with the MICs of MLS antibiotics. The present findings showed a significant correlation between MLS resistance and reduced susceptibility to biocides. In compliance with the high incidence of the efflux-encoding genes, especially mefA and mefE genes in the tolerant isolates with higher MICs to both MLS antibiotics and biocides, the efflux of resistant isolates was quantified, and there was a significant increase in the efflux of resistant isolates with higher MICs as compared to those with lower MICs. This could explain the crucial role of efflux in developing cross-resistance to both MLS antibiotics and biocides. [ABSTRACT FROM AUTHOR]
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- 2023
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46. Effect of Quorum Sensing Molecule Farnesol on Mixed Biofilms of Candida albicans and Staphylococcus aureus.
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Gaálová-Radochová, Barbora, Kendra, Samuel, Jordao, Luisa, Kursawe, Laura, Kikhney, Judith, Moter, Annette, and Bujdáková, Helena
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OXACILLIN ,QUORUM sensing ,STAPHYLOCOCCUS aureus ,CANDIDA albicans ,CENTRAL venous catheters ,FLUORESCENCE in situ hybridization - Abstract
The natural bioactive molecule farnesol (FAR) is widely studied mainly for its antibiofilm and antimicrobial properties. In addition, it increases the effectiveness of some antimicrobial substances, which makes it interesting for the development of combined therapy. In the present work, the effect of FAR either alone or in combination with oxacillin (OXA) on mixed biofilms formed by clinically relevant pathogens, Candida albicans and Staphylococcus aureus, was studied. S. aureus isolates used for biofilm formation originated from blood cultures and central venous catheters (CVC) were characterized in terms of antimicrobial resistance. The minimal biofilm inhibitory concentration (MBIC
50 ) for FAR of 48 h mixed biofilms formed by the C. albicans and methicillin-sensitive S. aureus (MSSA) was determined to be 125 μM, and for the mixed biofilms with methicillin-resistant S. aureus (MRSA) was determined to be 250 μM. Treatment of mixed biofilms with OXA (2 mg/mL) showed ≤4% inhibition; however, the combination of OXA (2 mg/mL) and FAR (300 μM) resulted in 80% inhibition of biofilms. In addition, planktonic cells of S. aureus exhibited an increased susceptibility to OXA, cefoxitin and kanamycin in the presence of FAR (150 and 300 μM). Scanning electron microscopy (SEM) micrographs confirmed patchy biofilm and lack of candidal hyphae in the samples treated with FAR and FAR/OXA in comparison to control and mixed biofilms treated only with OXA. Intriguingly, in a pilot experiment using fluorescence in situ hybridization (FISH), considerable differences in activity (as indicated by ribosome content) of staphylococcal cells were detected. While the activity rate of the staphylococci in mixed biofilms treated with FAR was high, no FISH-positive signal for staphylococcal cells was found in the biofilm treated with FAR/OXA. [ABSTRACT FROM AUTHOR]- Published
- 2023
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47. Antibiotic resistance pattern, capsular types, and molecular characterization of invasive isolates of Streptococcus pneumoniae in the south of Tunisia from 2012 to 2018.
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Ktari, Sonia, Ben Ayed, Nourelhouda, Ben Rbeh, Imen, Garbi, Nourhène, Maalej, Sonda, Mnif, Basma, Rhimi, Faouzia, and Hammami, Adnene
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STREPTOCOCCUS pneumoniae ,DRUG resistance in bacteria ,CHLORAMPHENICOL ,PNEUMOCOCCAL vaccines ,ERYTHROMYCIN ,CEFOTAXIME ,BETA lactam antibiotics ,ANTIBIOTICS - Abstract
Background: Streptococcus pneumoniae remains a leading cause of morbidity and mortality worldwide. In this study, we sought to analyze serotype distributions, antibiotic resistance, and genetic relationships of 106 clinical invasive pneumococcal isolates recovered in Tunisia between 2012 and 2018, prior to the routine use of pneumococcal conjugate vaccines (PCV). Methods: We used multiplex PCR, the disk diffusion method and/or E-test, and multi-locus sequence typing (MLST). Results: The most frequent serotypes were 14 (17%), 19F (14.2%), and 3 (11.3%). Of the 106 S. pneumoniae isolates, 67.9% were penicillin non-susceptible (29.4% were resistant), 45.3% were amoxicillin non-susceptible (17% were resistant), and 16% were cefotaxime non-susceptible. For antibiotics other than β-lactams, resistance rates to erythromycin, tetracycline, cotrimoxazole, and chloramphenicol were 62.3, 33, 22.6, and 4.7%, respectively. Two isolates were non-susceptible to levofloxacin. Among 66 erythromycin-resistant pneumococci, 77.3% exhibited the cMLSB phenotype, and 87.9% carried ermB gene. All tetracycline-resistant strains harbored the tetM gene. The potential coverage by 7-, 10-, and 13-valent pneumococcal conjugate vaccines were 55.7, 57.5, and 81.1%, respectively. A multilocus sequence typing analysis revealed great diversity. Fifty different sequence types (STs) were identified. These STs were assigned to 10 clonal complexes and 32 singletons. The most common STs were 179, 2918, 386, and 3772 – related mainly to 19F, 14, 6B/C, and 19A serotypes, respectively. Conclusions: This study demonstrated that the majority of the serotypes of invasive pneumococci in the Tunisian population were 14, 19F, and 3. Moreover, we noted a high degree of genetic diversity among invasive S. pneumoniae isolates. The highest proportions of antibiotic non-susceptible isolates were for penicillin, erythromycin, and tetracycline. Further molecular characteristics are required to monitor the genetic variations and to follow the emergence of resistant pneumococci for the post-vaccination era in Tunisia. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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48. Prevalence of macrolide–lincosamide–streptogramin resistant lactic acid bacteria isolated from food samples.
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Ashwini, M., Ray, Mousumi, Sumana, K., and Halami, Prakash M.
- Abstract
Lactic acid bacteria (LAB) being a reservoir of antibiotic resistance genes, tend to disseminate antibiotic resistance that possibly pose a threat to human and animal health. Therefore, the study focuses on the prevalence of macrolide-lincosamide-streptogramin- (MLS) resistance among LAB isolated from various food samples. Diverse phenotypic and genotypic MLS resistance were determined among the LAB species (n = 146) isolated from fermented food products (n = 6) and intestine of food-producing animals (n = 4). Double disc, triple disc diffusion and standard minimum inhibitory concentration (MIC) tests were evaluated for phenotypic MLS resistance. Specific primers for MLS resistance genes were used for the evaluation of genotypic MLS resistance and gene expressions using total RNA of each isolate at different antibiotic concentrations. The isolates identified are Levilactobacillus brevis (n = 1), Enterococcus hirae (n = 1), Limosilactobacillus fermentum (n = 2), Pediococcus acidilactici (n = 3), Enterococcus faecalis (n = 1). The MIC tests along with induction studies displayed cMLS
b , L phenotype, M phenotype, KH phenotype, I phenotype resistance among MLS antibiotics. Genotypic evaluation tests revealed the presence of ermB, mefA/E, msrA/B and msrC genes. Also, gene expression studies displayed increased level of gene expression to the twofold increased antibiotic concentrations. In the view of global health concern, this study identified that food samples and food-producing animals represent source of antibiotic resistant LAB that can disseminate resistance through food chain. This suggests the implementation of awareness in the use of antibiotics as growth promoters and judicious use of antibiotics in veterinary sectors in order to prevent the spread of antibiotic resistance. [ABSTRACT FROM AUTHOR]- Published
- 2023
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49. An Arsenal of Multiple Antimicrobial Resistance, Toxins, and Virulence Factors in Gram-Negative Bacterial Isolates from Food – A Formidable Combination!
- Author
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Alemu, Ashenafi, Girma, Selfu, and Mariam, Solomon H
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DRUG resistance in microorganisms ,GRAM-negative bacteria ,TOXINS ,ANIMAL products ,BACTERIAL diseases - Abstract
Background: Infectious diseases caused by pathogenic members of the family Enterobacteriaceae cause mortality and morbidity in humans. These are mediated mainly via toxins or virulence factors in combination with multiple antimicrobial resistance (MAR) against antimicrobials intended to treat infections. Resistance can be transferred to other bacteria, possibly also in association with other resistance determinants and/or virulence properties. Food-borne bacterial infections are one of the major causes of infections in humans. The level of scientific information about foodborne bacterial infections in Ethiopia is very limited at best. Methods: Bacteria were isolated from commercial dairy foods. These were cultured in appropriate media for identification at the family level (Enterobacteriaceae) based on Gram-negative, catalase-positive, oxidase-negative, and urease-negative phenotypes, followed by testing for the presence of virulence factors and resistance determinants to various antimicrobial classes using phenotypic and molecular tests. Results: Twenty Gram-negative bacteria isolated from the foods were found to be resistant to almost all antimicrobials belonging to the phenicol, aminoglycoside, fluoroquinolone, monobactam, and β-lactam classes. All of them were multiple-drug-resistant. The resistance to the β-lactams was due to the production of β-lactamases and were also mostly resistant to some of the β-lactam/β-lactamase inhibitor combinations. Some isolates also contained toxins. Conclusion: This small-scale study demonstrated the presence, in the isolates, of high levels of virulence factors and resistance to major antimicrobials that are in clinical use. Most treatment being empirical, there can be not only a high degree of treatment failure but also the likelihood for further development and dissemination of antimicrobial resistance. Since dairy foods are animal products, there is an urgent need to control animal-food-human transmission mechanisms, restrict antimicrobial use in animal agriculture, and improve clinical treatment from the usual empirical treatment to more targeted and effective treatment. [ABSTRACT FROM AUTHOR]
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- 2023
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50. Isolation, Antibiogram and Molecular Characterization of Group B Streptococci Isolates from Bovine Mastitis.
- Author
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Singh, Rajwent, Arora, A. K., Rai, T. S., and Chandra, Mudit
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STREPTOCOCCUS agalactiae ,BOVINE mastitis ,URINARY tract infections ,STREPTOCOCCUS ,MICROBIAL sensitivity tests ,NEONATAL sepsis - Abstract
Background: Group B streptococcus (GBS) or Streptococcus agalactiae is an important pathogen associated with bovine mastitis. The organism is also of public health consequences and may cause variety of infections ranging from neonatal sepsis, pneumonia and meningitis to localized infections and urinary tract infection or arthritisin adult humans. Widespread use of antibiotics in veterinary medicine has led to development of resistance among the pathogens. So there is need for surveillance of antimicrobial resistance to ensure effective treatment. Methods: Milk samples collected from mastitis affected animals were processed for isolation of Streptococcus agalactiae. The isolates were tested for antimicrobial susceptibility. Molecular characterisation was carried out by PCR to study the occurrence of resistance marker genes and virulence marker genes. RAPD was carried out to study genetic diversity among the isolates. Result: Six isolates of S. agalactiae were obtained from 182 milk samples. Highest resistance was observed against co-trimoxazole and tetracycline followed by ampicillin. tetM gene and tetO genes could be amplified in four and three isolates, respectively. None of the isolates showed amplification for ermA, ermB, mefA and mefE genes. Three isolates were positive for the five virulence genes tested (glnA, cfb, hylB, scaA and cyl). RAPD analysis demonstrated great intraspecific genetic diversity among the streptococcal isolates. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
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