26 results on '"Wombwell E"'
Search Results
2. WILDLIFE DISEASE: Recent introduction of a chytrid fungus endangers Western Palearctic salamanders
- Author
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Martel, A., Blooi, M., Adriaensen, C., Van Rooij, P., Beukema, W., Fisher, M. C., Farrer, R. A., Schmidt, B. R., Tobler, U., Goka, K., Lips, K. R., Muletz, C., Zamudio, K. R., Bosch, J., Lötters, S., Wombwell, E., Garner, T. W. J., Cunningham, A. A., Spitzen-van der Sluijs, A., Salvidio, S., Ducatelle, R., Nishikawa, K., Nguyen, T. T., KoIby, J. E., Van Bocxlaer, I., Bossuyt, F., and Pasmans, F.
- Published
- 2014
- Full Text
- View/download PDF
3. Development and worldwide use of a non-lethal and minimal population-level impact protocols for the isolation of chytrids from amphibians
- Author
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Fisher, M, Ghosh, P, Shelton, J, Bates, K, Brookes, L, Wierzbicki, C, Rosa, G, Farrer, R, Aanensen, D, Alvarado-Rybak, M, Bataille, A, Berger, L, Boell, S, Bosch, J, Clare, F, Courtois, E, Crottini, A, Cunningham, A, Doherty-Bone, T, Gebresenbet, F, Gower, D, Hoglund, J, Jenkinson, T, Kosch, T, James, T, Lambertini, C, Laurila, A, Lin, C-F, Loyau, A, Martel, A, Meurling, S, Miaud, C, Minting, P, Ndriantsoa, S, Ribeiro, L, Pasmans, F, Rakotonanahary, T, Rabemananjara, F, Schmeller, D, Schmidt, B, Skerratt, L, Smith, F, Soto-Azat, C, Tessa, G, Toledo, LF, Valenzuela-Sanchez, A, Verster, R, Voros, J, Waldman, B, Webb, R, Weldon, C, Wombwell, E, Zamudio, K, Longcore, J, Garner, T, and Natural Environment Research Council (NERC)
- Abstract
Parasitic chytrid fungi have emerged as a significant threat to amphibian species worldwide, necessitating the development of techniques to isolate these pathogens into sterile culture for research purposes. However, early methods of isolating chytrids from their hosts relied on killing amphibians. We modified a pre-existing protocol for isolating chytrids from infected animals to use toe clips and biopsies from toe webbing rather than euthanizing hosts, and distributed the protocol to interested researchers worldwide as part of the BiodivERsA project RACE; here called the RML protocol. In tandem, we developed a lethal procedure for isolating chytrids from tadpole mouthparts. Reviewing a database of use a decade after their inception, we find that these methods have been widely applied across at least 5 continents, 23 countries and in 62 amphibian species, and have been successfully used to isolate chytrids in remote field locations. Isolation of chytrids by the non-lethal RML protocol occured in 18% of attempts with 207 fungal isolates and three species of chytrid being recovered. Isolation of chytrids from tadpoles occured in 43% of attempts with 334 fungal isolates of one species (Batrachochytrium dendrobatidis) being recovered. Together, these methods have resulted in a significant reduction and refinement of our use of threatened amphibian species and have improved our ability to work with this important group of emerging fungal pathogens.
- Published
- 2018
4. Development and worldwide use of non-lethal, and minimal population-level impact, protocols for the isolation of amphibian chytrid fungi
- Author
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Fisher, MC, Ghosh, P, Shelton, JMG, Bates, K, Brookes, L, Wierzbicki, C, Rosa, GM, Farrer, RA, Aanensen, DM, Alvarado-Rybak, M, Bataille, A, Berger, L, Boell, S, Bosch, J, Clare, FC, Courtois, EA, Crottini, A, Cunningham, AA, Doherty-Bone, TM, Gebresenbet, F, Gower, DJ, Hoglund, J, James, TY, Jenkinson, TS, Kosch, TA, Lambertini, C, Laurila, A, Lin, C-F, Loyau, A, Martel, A, Meurling, S, Miaud, C, Minting, P, Ndriantsoa, S, O'Hanlon, SJ, Pasmans, F, Rakotonanahary, T, Rabemananjara, FCE, Ribeiro, LP, Schmeller, DS, Schmidt, BR, Skerratt, L, Smith, F, Soto-Azat, C, Tessa, G, Toledo, LF, Valenzuela-Sanchez, A, Verster, R, Voeroes, J, Waldman, B, Webb, RJ, Weldon, C, Wombwell, E, Zamudio, KR, Longcore, JE, Garner, TWJ, Fisher, MC, Ghosh, P, Shelton, JMG, Bates, K, Brookes, L, Wierzbicki, C, Rosa, GM, Farrer, RA, Aanensen, DM, Alvarado-Rybak, M, Bataille, A, Berger, L, Boell, S, Bosch, J, Clare, FC, Courtois, EA, Crottini, A, Cunningham, AA, Doherty-Bone, TM, Gebresenbet, F, Gower, DJ, Hoglund, J, James, TY, Jenkinson, TS, Kosch, TA, Lambertini, C, Laurila, A, Lin, C-F, Loyau, A, Martel, A, Meurling, S, Miaud, C, Minting, P, Ndriantsoa, S, O'Hanlon, SJ, Pasmans, F, Rakotonanahary, T, Rabemananjara, FCE, Ribeiro, LP, Schmeller, DS, Schmidt, BR, Skerratt, L, Smith, F, Soto-Azat, C, Tessa, G, Toledo, LF, Valenzuela-Sanchez, A, Verster, R, Voeroes, J, Waldman, B, Webb, RJ, Weldon, C, Wombwell, E, Zamudio, KR, Longcore, JE, and Garner, TWJ
- Abstract
Parasitic chytrid fungi have emerged as a significant threat to amphibian species worldwide, necessitating the development of techniques to isolate these pathogens into culture for research purposes. However, early methods of isolating chytrids from their hosts relied on killing amphibians. We modified a pre-existing protocol for isolating chytrids from infected animals to use toe clips and biopsies from toe webbing rather than euthanizing hosts, and distributed the protocol to researchers as part of the BiodivERsA project RACE; here called the RML protocol. In tandem, we developed a lethal procedure for isolating chytrids from tadpole mouthparts. Reviewing a database of use a decade after their inception, we find that these methods have been applied across 5 continents, 23 countries and in 62 amphibian species. Isolation of chytrids by the non-lethal RML protocol occured in 18% of attempts with 207 fungal isolates and three species of chytrid being recovered. Isolation of chytrids from tadpoles occured in 43% of attempts with 334 fungal isolates of one species (Batrachochytrium dendrobatidis) being recovered. Together, these methods have resulted in a significant reduction and refinement of our use of threatened amphibian species and have improved our ability to work with this group of emerging pathogens.
- Published
- 2018
5. Recent Asian origin of chytrid fungi causing global amphibian declines
- Author
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O’Hanlon, S.J., Rieux, A., Farrer, R.A., Rosa, G.M., Waldmann, P., Bataille, A., Kosch, T.A., Murray, K.A., Brankovics, B., Fumagalli, M., Martin, M.D., Wales, N., Alvarado-Rybak, M., Bates, K.A., Berger, L., Böll, S., Brookes, L., Clare, F., Courtois, E.A., Cunningham, A.A., Doherty-Bone, T.M., Ghosh, P., Gower, D.J., Hintz, W.E., Höglund, J., Jenkinson, T.S., Lin, C.-F., Laurila, A., Loyau, Adeline, Martel, A., Meurling, S., Miaud, C., Minting, P., Pasmans, F., Schmeller, Dirk Sven, Schmidt, B.R., Shelton, J.M.G., Skerratt, L.F., Smith, F., Soto-Azat, C., Spagnoletti, M., Tessa, G., Toledo, L.F., Valenzuela-Sánchez, A., Verster, R., Vörös, J., Webb, R.J., Wierzbicki, C., Wombwell, E., Zamudio, K.R., Aanensen, D.M., James, T.Y., Gilbert, M.T.P., Weldon, C., Bosch, J., Balloux, F., Garner, T.W.J., Fisher, M.C., O’Hanlon, S.J., Rieux, A., Farrer, R.A., Rosa, G.M., Waldmann, P., Bataille, A., Kosch, T.A., Murray, K.A., Brankovics, B., Fumagalli, M., Martin, M.D., Wales, N., Alvarado-Rybak, M., Bates, K.A., Berger, L., Böll, S., Brookes, L., Clare, F., Courtois, E.A., Cunningham, A.A., Doherty-Bone, T.M., Ghosh, P., Gower, D.J., Hintz, W.E., Höglund, J., Jenkinson, T.S., Lin, C.-F., Laurila, A., Loyau, Adeline, Martel, A., Meurling, S., Miaud, C., Minting, P., Pasmans, F., Schmeller, Dirk Sven, Schmidt, B.R., Shelton, J.M.G., Skerratt, L.F., Smith, F., Soto-Azat, C., Spagnoletti, M., Tessa, G., Toledo, L.F., Valenzuela-Sánchez, A., Verster, R., Vörös, J., Webb, R.J., Wierzbicki, C., Wombwell, E., Zamudio, K.R., Aanensen, D.M., James, T.Y., Gilbert, M.T.P., Weldon, C., Bosch, J., Balloux, F., Garner, T.W.J., and Fisher, M.C.
- Abstract
Globalized infectious diseases are causing species declines worldwide, but their source often remains elusive. We used whole-genome sequencing to solve the spatiotemporal origins of the most devastating panzootic to date, caused by the fungus Batrachochytrium dendrobatidis, a proximate driver of global amphibian declines. We traced the source of B. dendrobatidis to the Korean peninsula, where one lineage, BdASIA-1, exhibits the genetic hallmarks of an ancestral population that seeded the panzootic. We date the emergence of this pathogen to the early 20th century, coinciding with the global expansion of commercial trade in amphibians, and we show that intercontinental transmission is ongoing. Our findings point to East Asia as a geographic hotspot for B. dendrobatidis biodiversity and the original source of these lineages that now parasitize amphibians worldwide.
- Published
- 2018
6. Development and worldwide use of non-lethal, and minimal population-level impact, protocols for the isolation of amphibian chytrid fungi
- Author
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Fisher, M.C., Ghosh, P., Shelton, J.M.G., Bates, K., Brookes, L., Wierzbicki, C., Rosa, G.M., Farrer, R.A., Aanensen, D.M., Alvarado-Rybak, M., Bataille, A., Berger, L., Böll, S., Bosch, J., Clare, F.C., Courtois, E.A., Crottini, A., Cunningham, A.A., Doherty-Bone, T.M., Gebresenbet, F., Gowers, K., Höglund, J., James, T.Y., Jenkinson, T.S., Kosch, T.A., Lambertini, C., Laurila, A., Lin, C.-F., Loyau, Adeline, Martel, A., Meurling, S., Miaud, C., Minting, P., Ndriantsoa, S., O’Hanlon, S.J., Pasmans, F., Rakotonanahary, T., Rabemananjara, F.C.E., Ribeiro, L.P., Schmeller, Dirk Sven, Schmidt, B.R., Skerratt, L., Smith, F., Soto-Azat, C., Tessa, G., Toledo, L.F., Valenzuela-Sánchez, A., Verster, R., Vörös, J., Waldman, B., Webb, R.J., Weldon, C., Wombwell, E., Zamudio, K.R., Longcore, J.E., Garner, T.W.J., Fisher, M.C., Ghosh, P., Shelton, J.M.G., Bates, K., Brookes, L., Wierzbicki, C., Rosa, G.M., Farrer, R.A., Aanensen, D.M., Alvarado-Rybak, M., Bataille, A., Berger, L., Böll, S., Bosch, J., Clare, F.C., Courtois, E.A., Crottini, A., Cunningham, A.A., Doherty-Bone, T.M., Gebresenbet, F., Gowers, K., Höglund, J., James, T.Y., Jenkinson, T.S., Kosch, T.A., Lambertini, C., Laurila, A., Lin, C.-F., Loyau, Adeline, Martel, A., Meurling, S., Miaud, C., Minting, P., Ndriantsoa, S., O’Hanlon, S.J., Pasmans, F., Rakotonanahary, T., Rabemananjara, F.C.E., Ribeiro, L.P., Schmeller, Dirk Sven, Schmidt, B.R., Skerratt, L., Smith, F., Soto-Azat, C., Tessa, G., Toledo, L.F., Valenzuela-Sánchez, A., Verster, R., Vörös, J., Waldman, B., Webb, R.J., Weldon, C., Wombwell, E., Zamudio, K.R., Longcore, J.E., and Garner, T.W.J.
- Abstract
Parasitic chytrid fungi have emerged as a significant threat to amphibian species worldwide, necessitating the development of techniques to isolate these pathogens into culture for research purposes. However, early methods of isolating chytrids from their hosts relied on killing amphibians. We modified a pre-existing protocol for isolating chytrids from infected animals to use toe clips and biopsies from toe webbing rather than euthanizing hosts, and distributed the protocol to researchers as part of the BiodivERsA project RACE; here called the RML protocol. In tandem, we developed a lethal procedure for isolating chytrids from tadpole mouthparts. Reviewing a database of use a decade after their inception, we find that these methods have been applied across 5 continents, 23 countries and in 62 amphibian species. Isolation of chytrids by the non-lethal RML protocol occured in 18% of attempts with 207 fungal isolates and three species of chytrid being recovered. Isolation of chytrids from tadpoles occured in 43% of attempts with 334 fungal isolates of one species (Batrachochytrium dendrobatidis) being recovered. Together, these methods have resulted in a significant reduction and refinement of our use of threatened amphibian species and have improved our ability to work with this group of emerging pathogens.
- Published
- 2018
7. Chytrid Fungus (Batrachochytrium dendrobatidis) Undetected in the Two Orders of Seychelles Amphibians
- Author
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Labisko, J., Maddock, S. T., Taylor, M. L., Chong-Seng, L, Gower, D. J., Wynne, F. J., Wombwell, E., Morel, C., French, G. C. A., Bunbury, N., and Bradfield, K. S.
- Subjects
QL ,animal structures ,QH ,parasitic diseases ,QH75 ,geographic locations - Abstract
Reports the first disease screening for chytrid Fungus (Batrachochytrium dendrobatidis) in amphibians across the Seychelles Archipelago
- Published
- 2015
8. Wildlife disease. Recent introduction of a chytrid fungus endangers Western Palearctic salamanders.
- Author
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10335292, Martel, A, Blooi, M, Adriaensen, C, Van Rooij, P, Beukema, W, Fisher, M C, Farrer, R A, Schmidt, B R, Tobler, U, Goka, K, Lips, K R, Muletz, C, Zamudio, K R, Bosch, J, Lötters, S, Wombwell, E, Garner, T W J, Cunningham, A A, Spitzen-van der Sluijs, A, Salvidio, S, Ducatelle, R, Nishikawa, K, Nguyen, T T, Kolby, J E, Van Bocxlaer, I, Bossuyt, F, Pasmans, F, 10335292, Martel, A, Blooi, M, Adriaensen, C, Van Rooij, P, Beukema, W, Fisher, M C, Farrer, R A, Schmidt, B R, Tobler, U, Goka, K, Lips, K R, Muletz, C, Zamudio, K R, Bosch, J, Lötters, S, Wombwell, E, Garner, T W J, Cunningham, A A, Spitzen-van der Sluijs, A, Salvidio, S, Ducatelle, R, Nishikawa, K, Nguyen, T T, Kolby, J E, Van Bocxlaer, I, Bossuyt, F, and Pasmans, F
- Abstract
Emerging infectious diseases are reducing biodiversity on a global scale. Recently, the emergence of the chytrid fungus Batrachochytrium salamandrivorans resulted in rapid declines in populations of European fire salamanders. Here, we screened more than 5000 amphibians from across four continents and combined experimental assessment of pathogenicity with phylogenetic methods to estimate the threat that this infection poses to amphibian diversity. Results show that B. salamandrivorans is restricted to, but highly pathogenic for, salamanders and newts (Urodela). The pathogen likely originated and remained in coexistence with a clade of salamander hosts for millions of years in Asia. As a result of globalization and lack of biosecurity, it has recently been introduced into naïve European amphibian populations, where it is currently causing biodiversity loss.
- Published
- 2014
9. Analysis of Earth impedances using magnetotelluric fields.
- Author
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Morrison, H. F., Wombwell, E., and Ward, S. H.
- Published
- 1968
- Full Text
- View/download PDF
10. Comparison of Cefazolin and Ceftriaxone Enterobacterales Susceptibilities for Inpatient Treatment of Urinary Tract Infections and Risk of Hospital-onset Clostridioides difficile Infection.
- Author
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Wombwell E and Rosa A
- Subjects
- Humans, Retrospective Studies, Male, Female, Middle Aged, Aged, Cross Infection drug therapy, Cross Infection microbiology, Cross Infection epidemiology, Inpatients, Enterobacteriaceae drug effects, Enterobacteriaceae isolation & purification, Adult, Clostridioides difficile drug effects, Clostridioides difficile isolation & purification, Cefazolin therapeutic use, Cefazolin adverse effects, Urinary Tract Infections drug therapy, Urinary Tract Infections microbiology, Urinary Tract Infections epidemiology, Ceftriaxone adverse effects, Ceftriaxone therapeutic use, Anti-Bacterial Agents adverse effects, Anti-Bacterial Agents therapeutic use, Clostridium Infections microbiology, Clostridium Infections drug therapy, Clostridium Infections epidemiology, Microbial Sensitivity Tests
- Abstract
Purpose: Urinary tract infection (UTI) is the second most common indication for antibiotic therapy among inpatients in the United States. Ceftriaxone, a third-generation cephalosporin, is habitually chosen to treat inpatient UTIs due to familiarity, cost, and perceived safety. However, third-generation cephalosporins increase the risk of health care facility-onset Clostridioides difficile infection (HOCDI) more than any other antibiotic group, while no statistical risk exists for first-generation cephalosporins. Recent evidence comparing Enterobacterales susceptibility for first- and third-generation cephalosporins in urinary specimens in the United States is limited. This analysis assessed the comparative activity of cefazolin and ceftriaxone for Enterobacterales urinary isolates and incidence of HOCDI to determine the usefulness of cefazolin as an empirical agent to manage inpatient UTI and limit ceftriaxone collateral damage., Methods: This was a retrospective single-center observational study. Microbiologic susceptibility data were analyzed for Escherichia coli, Klebsiella pneumoniae, and Proteus mirabilis urinary specimens taken from adult inpatients admitted from January 1, 2022, to December 31, 2022. Primary outcome was incidence of E coli, K pneumoniae, and P mirabilis susceptibility to cefazolin in uncomplicated UTI (MIC <16 µg/mL). Secondary outcomes include susceptibility for complicated UTI and HOCDI risk associated with cefazolin and ceftriaxone., Findings: A total of 1150 urine samples were identified as E coli, K pneumoniae, and P mirabilis in 2022. Susceptibility to cefazolin was observed in 1064 (92.5%) of 1150 isolates using the MIC breakpoint for uncomplicated UTI and to ceftriaxone in 1115 (97.0%) of 1150 isolates (P < 0.001). From 2016 to 2022, either cefazolin or ceftriaxone was administered in 26,462 inpatient admissions, with HOCDI diagnoses occurring in 89 admissions. HOCDI developed in 78 admissions (0.40%) with ceftriaxone exposure, and 11 cases (0.15%) developed in cefazolin-exposed admissions (adjusted odds ratio, 2.44; 95% CI, 1.25-4.76; P < 0.001)., Implications: Cefazolin exhibits high susceptibility for uropathogens commonly implicated in cases of uncomplicated UTI, the most common UTI diagnosis among inpatients. Although ceftriaxone shows a higher susceptibility rate against these common uropathogens, it more than doubles the risk for HOCDI compared with cefazolin. For institutions evaluating opportunities to reduce ceftriaxone use to limit associated collateral damage such as HOCDI, use of cefazolin for uncomplicated UTI may be evaluated by using local susceptibility data., Competing Interests: Declaration of competing interest None declared., (Copyright © 2024 Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
11. Evidence-Based Medicine and Pharmacotherapy Content Alignment.
- Author
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Bowers BL, Sperry M, Englin EF, and Wombwell E
- Subjects
- Humans, Educational Measurement, Evidence-Based Medicine education, Clinical Decision-Making, Curriculum, Education, Pharmacy, Students, Pharmacy
- Abstract
Objective: When effectively executed, content alignment can aid student performance in associated courses. Limited research exists for content alignment of evidence-based medicine (EBM) and pharmacotherapy courses. This study assesses the impact of EBM and pharmacotherapy course alignment on student performance., Methods: Content alignment included assignment of 6 landmark trials in EBM coursework. The articles were identified by pharmacotherapy instructors as "landmark" to management of associated diseases in the aligned pharmacotherapy semester. Articles were the basis for quizzes over skills taught in the EBM course and were referenced during pharmacotherapy lectures., Results: During the alignment semester, students were more likely to cite specific guidelines and/or primary literature to rationalize pharmacotherapeutic plans on examinations compared with the prealignment period (54% vs 34%). Overall, pharmacotherapy case performance and plan rationale scores were significantly higher in the alignment semester compared with prealignment. Student performance on the Assessing Competency in Evidence-Based Medicine tool improved from the start of the semester (8.64, SD 1.66) to the end (9.5, SD 1.49; mean score +0.86). Comfort in applying EBM analysis to primary literature increased significantly between the first and final assignments, with 6.7% and 71.7% of students self-reporting a high degree of confidence, respectively. Students (73%) reported an enhanced understanding of pharmacotherapy due to alignment compared with a previous semester of pharmacotherapy without alignment., Conclusion: The use of landmark trial assignments to align EBM and pharmacotherapy coursework demonstrated a positive impact on student rationale for clinical decision-making and student confidence in evaluating primary literature., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023. Published by Elsevier Inc.)
- Published
- 2023
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- View/download PDF
12. Saccharomyces boulardii prophylaxis for targeted antibiotics and infectious indications to reduce healthcare facility-onset Clostridioides difficile infection.
- Author
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Wombwell E
- Subjects
- Humans, Anti-Bacterial Agents adverse effects, Ceftriaxone therapeutic use, Retrospective Studies, Cohort Studies, Saccharomyces cerevisiae, Delivery of Health Care, Saccharomyces boulardii, Clostridioides difficile, Clostridium Infections drug therapy, Clostridium Infections prevention & control, Communicable Diseases, Cross Infection drug therapy, Cross Infection prevention & control, Cross Infection chemically induced
- Abstract
Background: Probiotic prophylaxis for Clostridioides difficile infection (CDI) is controversial stemming from deficits in strain and disease specificity considerations and concern for adverse effects. Here risk for healthcare facility-onset CDI (HO-CDI) dependent on concomitant antibiotic and infectious indication is assessed to identify opportunities for targeted prophylaxis., Methods: Retrospective matched-cohort study from January 2016 through March 2019. Patient-admissions administered high risk antibiotics were categorized by Saccharomyces boulardii administration and matched 1:1 to non-recipients. Unadjusted and adjusted HO-CDI risk estimated using Cox proportional hazards regression., Results: S. boulardii administration was associated with 48% risk reduction for HO-CDI compared to non-recipients (aHR 0.52, 95% CI: 0.31-0.87). Patient-admissions administered antibiotics and S. boulardii for a pneumonia indication exhibited a 57% reduction in risk for HO-CDI (aHR 0.43, 95% CI: 0.19-0.95). Administration of S. boulardii with ceftriaxone was associated with a 76% reduced risk of HO-CDI (aHR 0.24, 95% CI: 0.11-0.53) compared to ceftriaxone without S. boulardii, number needed to treat of 100., Conclusions: S. boulardii administration is associated with a significant HO-CDI risk reduction for inpatients receiving antibiotics associated with CDI. Institutions interested in targeted use of S. boulardii to limit potential adverse effects may consider prophylaxis for inpatients with pneumonia or receiving ceftriaxone., Competing Interests: Declaration of competing interest There is no conflict of interest for the author., (Copyright © 2022 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.)
- Published
- 2023
- Full Text
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13. Incidence of Saccharomyces cerevisiae fungemia in hospitalised patients administered Saccharomyces boulardii probiotic.
- Author
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Wombwell E, Bransteitter B, and Gillen LR
- Subjects
- Adult, Humans, Incidence, Retrospective Studies, Cross Infection epidemiology, Cross Infection prevention & control, Fungemia epidemiology, Fungemia prevention & control, Probiotics adverse effects, Saccharomyces boulardii, Saccharomyces cerevisiae pathogenicity
- Abstract
Background: Bloodstream infection is an untoward effect of probiotic administration described by case reports and a cited reason to avoid using in the critically ill. The incidence rate of bloodstream infection in a population administered probiotics remains unknown., Methods: A retrospective observational analysis of incident Saccharomyces cerevisiae fungemia in a population of hospitalised patients administered Saccharomyces boulardii for primary prevention of hospital-onset Clostridioides difficile infection. Adult patients admitted to an inpatient medical unit for 48-h or more between January 1, 2016 and December 31, 2019 are included. Facility medication administration records and microbiology records were evaluated for S boulardii probiotic administration and incidence of S cerevisiae positive blood cultures. Microbiologic identification methods were unable to distinguish S cerevisiae from S boulardii., Results: Administration of S boulardii probiotic occurred in 16,404 of 46,729 patients analysed. S cerevisiae fungemia was identified in 18 probiotic recipients (0.11%). The observed incidence of fungemia attributable to S boulardii administration is 1.70 cases per 10,000 patient-days. Central-line days numbered 52,949 yielding an incidence of 0.26 cases of S cerevisiae per 1,000 central-line days. Intensive care unit admission was significantly associated with an increase in the risk of S cerevisiae (OR 6.55, CI 2.28-18.87), incidence rate of 0.47 cases per 1,000 patient-days., Conclusion: The risk of bloodstream infection as a result of S boulardii probiotic use appears restricted to S boulardii recipients. The risk for probiotic-related bloodstream infection does not appear greater than the risk of any hospital-acquired bloodstream infection both inside and outside of the intensive care unit., (© 2021 Wiley-VCH GmbH.)
- Published
- 2021
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- View/download PDF
14. The Effect of Saccharomyces boulardii Primary Prevention on Risk of Hospital-onset Clostridioides difficile Infection in Hospitalized Patients Administered Antibiotics Frequently Associated With C. difficile Infection.
- Author
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Wombwell E, Patterson ME, Bransteitter B, and Gillen LR
- Subjects
- Anti-Bacterial Agents therapeutic use, Clostridioides, Hospitals, Humans, Primary Prevention, Retrospective Studies, Clostridioides difficile, Clostridium Infections drug therapy, Clostridium Infections epidemiology, Clostridium Infections prevention & control, Cross Infection drug therapy, Saccharomyces boulardii
- Abstract
Background: Hospital-onset Clostridioides difficile infection (HO-CDI) is a costly problem leading to readmissions, morbidity, and mortality. We evaluated the effect of a single probiotic strain, Saccharomyces boulardii, at a standardized dose on the risk of HO-CDI within hospitalized patients administered antibiotics frequently associated with HO-CDI., Methods: This retrospective cohort study merged hospital prescribing data with HO-CDI case data. The study assessed patients hospitalized from January 2016 through March 2017 who were administered at least 1 dose of an antibiotic frequently associated with HO-CDI during hospitalization. Associations between S. boulardii administration, including timing, and HO-CDI incidence were evaluated by multivariable logistic regression., Results: The study included 8763 patients. HO-CDI incidence was 0.66% in the overall cohort. HO-CDI incidence was 0.56% and 0.82% among patients coadministered S. boulardii with antibiotics and not coadministered S. boulardii, respectively. In adjusted analysis, patients coadministered S. boulardii had a reduced risk of HO-CDI (odds ratio [OR], 0.57 [95% confidence interval {CI}, .33-.96]; P = .04) compared to patients not coadministered S. boulardii. Patients coadministered S. boulardii within 24 hours of antibiotic start demonstrated a reduced risk of HO-CDI (OR, 0.47 [95% CI, .23-.97]; P = .04) compared to those coadministered S. boulardii after 24 hours of antibiotic start., Conclusions: Saccharomyces boulardii administered to hospitalized patients prescribed antibiotics frequently linked with HO-CDI was associated with a reduced risk of HO-CDI., (© The Author(s) 2020. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail: journals.permissions@oup.com.)
- Published
- 2021
- Full Text
- View/download PDF
15. Development and worldwide use of non-lethal, and minimal population-level impact, protocols for the isolation of amphibian chytrid fungi.
- Author
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Fisher MC, Ghosh P, Shelton JMG, Bates K, Brookes L, Wierzbicki C, Rosa GM, Farrer RA, Aanensen DM, Alvarado-Rybak M, Bataille A, Berger L, Böll S, Bosch J, Clare FC, A Courtois E, Crottini A, Cunningham AA, Doherty-Bone TM, Gebresenbet F, Gower DJ, Höglund J, James TY, Jenkinson TS, Kosch TA, Lambertini C, Laurila A, Lin CF, Loyau A, Martel A, Meurling S, Miaud C, Minting P, Ndriantsoa S, O'Hanlon SJ, Pasmans F, Rakotonanahary T, Rabemananjara FCE, Ribeiro LP, Schmeller DS, Schmidt BR, Skerratt L, Smith F, Soto-Azat C, Tessa G, Toledo LF, Valenzuela-Sánchez A, Verster R, Vörös J, Waldman B, Webb RJ, Weldon C, Wombwell E, Zamudio KR, Longcore JE, and Garner TWJ
- Subjects
- Animals, Information Dissemination, Larva microbiology, Software, Amphibians microbiology, Chytridiomycota isolation & purification, Endangered Species
- Abstract
Parasitic chytrid fungi have emerged as a significant threat to amphibian species worldwide, necessitating the development of techniques to isolate these pathogens into culture for research purposes. However, early methods of isolating chytrids from their hosts relied on killing amphibians. We modified a pre-existing protocol for isolating chytrids from infected animals to use toe clips and biopsies from toe webbing rather than euthanizing hosts, and distributed the protocol to researchers as part of the BiodivERsA project RACE; here called the RML protocol. In tandem, we developed a lethal procedure for isolating chytrids from tadpole mouthparts. Reviewing a database of use a decade after their inception, we find that these methods have been applied across 5 continents, 23 countries and in 62 amphibian species. Isolation of chytrids by the non-lethal RML protocol occured in 18% of attempts with 207 fungal isolates and three species of chytrid being recovered. Isolation of chytrids from tadpoles occured in 43% of attempts with 334 fungal isolates of one species (Batrachochytrium dendrobatidis) being recovered. Together, these methods have resulted in a significant reduction and refinement of our use of threatened amphibian species and have improved our ability to work with this group of emerging pathogens.
- Published
- 2018
- Full Text
- View/download PDF
16. Recent Asian origin of chytrid fungi causing global amphibian declines.
- Author
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O'Hanlon SJ, Rieux A, Farrer RA, Rosa GM, Waldman B, Bataille A, Kosch TA, Murray KA, Brankovics B, Fumagalli M, Martin MD, Wales N, Alvarado-Rybak M, Bates KA, Berger L, Böll S, Brookes L, Clare F, Courtois EA, Cunningham AA, Doherty-Bone TM, Ghosh P, Gower DJ, Hintz WE, Höglund J, Jenkinson TS, Lin CF, Laurila A, Loyau A, Martel A, Meurling S, Miaud C, Minting P, Pasmans F, Schmeller DS, Schmidt BR, Shelton JMG, Skerratt LF, Smith F, Soto-Azat C, Spagnoletti M, Tessa G, Toledo LF, Valenzuela-Sánchez A, Verster R, Vörös J, Webb RJ, Wierzbicki C, Wombwell E, Zamudio KR, Aanensen DM, James TY, Gilbert MTP, Weldon C, Bosch J, Balloux F, Garner TWJ, and Fisher MC
- Subjects
- Africa, Americas, Animals, Asia, Australia, Chytridiomycota classification, Chytridiomycota genetics, Chytridiomycota isolation & purification, Chytridiomycota pathogenicity, Europe, Genes, Fungal, Genetic Variation, Hybridization, Genetic, Korea, Phylogeny, Sequence Analysis, DNA, Virulence, Amphibians microbiology, Extinction, Biological
- Abstract
Globalized infectious diseases are causing species declines worldwide, but their source often remains elusive. We used whole-genome sequencing to solve the spatiotemporal origins of the most devastating panzootic to date, caused by the fungus Batrachochytrium dendrobatidis , a proximate driver of global amphibian declines. We traced the source of B. dendrobatidis to the Korean peninsula, where one lineage, Bd ASIA-1, exhibits the genetic hallmarks of an ancestral population that seeded the panzootic. We date the emergence of this pathogen to the early 20th century, coinciding with the global expansion of commercial trade in amphibians, and we show that intercontinental transmission is ongoing. Our findings point to East Asia as a geographic hotspot for B. dendrobatidis biodiversity and the original source of these lineages that now parasitize amphibians worldwide., (Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)
- Published
- 2018
- Full Text
- View/download PDF
17. Inpatient Proton Pump Inhibitor Administration and Hospital-Acquired Clostridium difficile Infection: Evidence and Possible Mechanism.
- Author
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Wombwell E, Chittum ME, and Leeser KR
- Subjects
- Humans, Clostridium Infections epidemiology, Cross Infection epidemiology, Hospitalization, Proton Pump Inhibitors administration & dosage
- Abstract
The incidence of Clostridium difficile infection continues to increase globally. Particularly concerning are hospital-acquired cases that attribute significant morbidity, mortality, and expenditures to the health care system. Proton pump inhibitors, which are widely prescribed and generally considered to have minimal adverse effects, have recently come under scrutiny for positive associations with C. difficile infection development. This article will specifically review the current state of evidence demonstrating a positive association between nosocomial proton pump inhibitor administration and the incidence of hospital-acquired C. difficile infection. In addition, the article delivers state-of-the-art knowledge relative to mechanisms by which proton pump inhibitor exposure may propagate the manifestation of C. difficile infection., (Copyright © 2018 Elsevier Inc. All rights reserved.)
- Published
- 2018
- Full Text
- View/download PDF
18. Religious barriers to measles vaccination.
- Author
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Wombwell E, Fangman MT, Yoder AK, and Spero DL
- Subjects
- Fetal Research ethics, Humans, Proteins, United States, Measles Vaccine, Religion, Vaccination ethics
- Abstract
In 2014, the United States has experienced an increase in measles activity, the most since the elimination of the virus in 2000. The measles infection occurs in unvaccinated individuals. Communities and individuals choose to not vaccinate for a number of reasons, primarily citing religious and philosophical motives. Objections based upon religion most often center on the use of aborted human fetus tissue used in the rubella component of the combined vaccine products, and animal derived gelatins used in vaccine production. Objections among religious communities may also not be faith based, rather in some cases concerns related to lack of safety and efficacy of the vaccination result in refusal.
- Published
- 2015
- Full Text
- View/download PDF
19. The role of aldosterone antagonism agents in diabetic kidney disease.
- Author
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Wombwell E and Naglich A
- Subjects
- Angiotensin Receptor Antagonists therapeutic use, Angiotensin-Converting Enzyme Inhibitors therapeutic use, Drug Therapy, Combination nursing, Humans, Diabetic Nephropathies drug therapy, Diabetic Nephropathies nursing, Kidney Failure, Chronic drug therapy, Kidney Failure, Chronic nursing, Mineralocorticoid Receptor Antagonists therapeutic use
- Abstract
Background: Diabetic kidney disease is a common consequence of the development of diabetes. In the United Kingdom 18-30% of chronic kidney disease cases and 44% of end-stage renal disease cases in the United States have been attributed to complications of diabetic kidney disease. Angiotensin blockade using angiotensin converting enzyme inhibitors or angiotensin receptor blockers is the standard for slowing the progression of diabetic kidney disease. Evidence suggests that aldosterone antagonism added to standard therapy may be beneficial., Aim of Review: This paper aims to explore the pathophysiological contribution of aldosterone in diabetic kidney disease and review available literature for aldosterone antagonism through mineralocorticoid receptor blockade., Methods: A comprehensive literature search was conducted. Results were analysed and summarised., Results: Nine trials evaluating a total of 535 patients with diabetic kidney disease were identified that evaluated the use of aldosterone antagonists for reducing the signs of diabetic kidney disease. All trials demonstrated a marked decrease in urinary protein excretion when compared to, or added to angiotensin converting enzyme inhibition or angiotensin receptor blockade. The most commonly reported side effect in all of the trials was hyperkalaemia, which occurred in 6.1% of all patients evaluated. Aldosterone antagonists were generally well tolerated in the evaluated patient populations., Conclusion: Aldosterone antagonism may represent a safe and effective complimentary therapy to the use of angiotensin converting enzyme inhibition, or angiotensin receptor blockade, for slowing the progression of diabetic kidney disease., (© 2014 European Dialysis and Transplant Nurses Association/European Renal Care Association.)
- Published
- 2015
- Full Text
- View/download PDF
20. The Value of Pharmacy Residency Training for Health Systems: An Annotated Bibliography.
- Author
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Swan JT, Giouroukakis M, Shank BR, Crona DJ, Berger K, and Wombwell E
- Subjects
- Humans, Patient-Centered Care organization & administration, Professional Role, Education, Pharmacy, Graduate methods, Pharmacists organization & administration, Pharmacy Residencies, Pharmacy Service, Hospital organization & administration
- Abstract
Purpose: Identify and summarize articles that describe the value that pharmacy residency training offers to sponsoring health systems., Summary: There is a tremendous gap between the number of resident applicants and the number of pharmacy residencies available. Informing health-system administration executives about the proven value of residency training is key to expanding the number of available positions. To address this disparity, a comprehensive and systematic literature search to identify publications highlighting the value that pharmacy residency training provides to the sponsor hospital or health system was conducted. Articles were identified through query of PubMed and SciVerse SCOPUS and through review of bibliographies from relevant articles. Twenty articles were identified and summarized in this annotated bibliography that demonstrate perceived and quantitative value of pharmacy residency training for health systems that sponsor residency training., Conclusion: Pharmacy residency training programs are essential for pharmacists that will primarily engage in direct patient care activities. This annotated bibliography includes key publications that provide evidence of the value that pharmacy residents provide to the sponsoring health system. This manuscript will aid prospective residency directors interested in developing new residency positions at new institutions or for residency program directors interested in expanding the total number of resident positions available at the existing sites., (© The Author(s) 2014.)
- Published
- 2014
- Full Text
- View/download PDF
21. Assessment of Tdap administration rates from 2009 to 2012 at a large urban nonteaching hospital.
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Wombwell E, Palecek W, Englin E, and Nguyen T
- Subjects
- Guideline Adherence, Humans, Diphtheria-Tetanus-acellular Pertussis Vaccines administration & dosage, Hospitals, Urban statistics & numerical data, Practice Guidelines as Topic
- Abstract
Due to the significant rise in pertussis cases reported in 2012, these authors investigated the tetanus toxoid, reduced diphtheria toxoid, and acellular pertussis (Tdap) vaccine administration at our institution from 2009 to 2012 to determine if changes in prescribing practices reflected published updates from the Advisory Committee on Immunization Practices (ACIP). A single large, urban, private, non-teaching hospital. Documented Tdap vaccines administered from January 2009 through December 2012 were retrieved using an electronic data pull. The incidence of Tdap vaccine administration was reported as number of events per 1,000 patient visits. This data pull served to provide the longitudinal context to prescribing pattern changes at our facility, which were then compared to ACIP vaccination recommendation changes. Tdap administrations increased from 1,365 vaccinations in 2009 to 3,048 vaccinations in 2012. Tdap vaccine administration increased significantly each successive year from 2009 to 2012 from 23.96 ± 1.25 to 47.15 ± 1.63 vaccines per 1,000 patient visits to the facility. Confidence intervals did not overlap for consecutive years representing statistically significant differences between vaccination rates from year to year. Review of Tdap administrations demonstrates a clear and significant increase over consecutive years from 2009 to 2012. Over this time period there were no institutional initiatives aimed at increasing appropriate Tdap use at our institution. This study suggests a correlation between ACIP vaccination recommendations and provider prescribing of Tdap, although no definitive association can be made.
- Published
- 2014
- Full Text
- View/download PDF
22. West Africa - a safe haven for frogs? A sub-continental assessment of the chytrid fungus (Batrachochytrium dendrobatidis).
- Author
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Penner J, Adum GB, McElroy MT, Doherty-Bone T, Hirschfeld M, Sandberger L, Weldon C, Cunningham AA, Ohst T, Wombwell E, Portik DM, Reid D, Hillers A, Ofori-Boateng C, Oduro W, Plötner J, Ohler A, Leaché AD, and Rödel MO
- Subjects
- Africa, Western epidemiology, Animals, Ecosystem, Models, Biological, Polymerase Chain Reaction, Species Specificity, Anura microbiology, Chytridiomycota genetics, Dermatomycoses epidemiology, Dermatomycoses veterinary
- Abstract
A putative driver of global amphibian decline is the panzootic chytrid fungus Batrachochytrium dendrobatidis (Bd). While Bd has been documented across continental Africa, its distribution in West Africa remains ambiguous. We tested 793 West African amphibians (one caecilian and 61 anuran species) for the presence of Bd. The samples originated from seven West African countries - Bénin, Burkina Faso, Côte d'Ivoire, Ghana, Guinea, Liberia, Sierra Leone - and were collected from a variety of habitats, ranging from lowland rainforests to montane forests, montane grasslands to humid and dry lowland savannahs. The species investigated comprised various life-history strategies, but we focused particularly on aquatic and riparian species. We used diagnostic PCR to screen 656 specimen swabs and histology to analyse 137 specimen toe tips. All samples tested negative for Bd, including a widespread habitat generalist Hoplobatrachus occipitalis which is intensively traded on the West African food market and thus could be a potential dispersal agent for Bd. Continental fine-grained (30 arc seconds) environmental niche models suggest that Bd should have a broad distribution across West Africa that includes most of the regions and habitats that we surveyed. The surprising apparent absence of Bd in West Africa indicates that the Dahomey Gap may have acted as a natural barrier. Herein we highlight the importance of this Bd-free region of the African continent - especially for the long-term conservation of several threatened species depending on fast flowing forest streams (Conraua alleni ("Vulnerable") and Petropedetes natator ("Near Threatened")) as well as the "Critically Endangered" viviparous toad endemic to the montane grasslands of Mount Nimba (Nimbaphrynoides occidentalis).
- Published
- 2013
- Full Text
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23. Leadership journal club.
- Author
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Wombwell E, Murray C, Davis SJ, Palmer K, Nayar M, and Konkol J
- Subjects
- Humans, Societies, Pharmaceutical, United States, Leadership, Periodicals as Topic, Pharmacists organization & administration
- Published
- 2011
- Full Text
- View/download PDF
24. Observations using text messaging as an interactive tool.
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Wombwell E
- Subjects
- Education, Pharmacy methods, Humans, Interpersonal Relations, Cell Phone trends, Education, Pharmacy trends, Students, Pharmacy
- Published
- 2010
25. High-fidelity patient simulation series to supplement introductory pharmacy practice experiences.
- Author
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Vyas D, Wombwell E, Russell E, and Caligiuri F
- Subjects
- Clinical Competence, Curriculum, Educational Measurement, Health Knowledge, Attitudes, Practice, Humans, Models, Educational, Patient Care Team, Problem-Based Learning methods, Education, Pharmacy methods, Patient Simulation, Students, Pharmacy
- Abstract
Objective: To introduce a high-fidelity simulation series into a 5-year doctor of pharmacy (PharmD) curriculum to demonstrate a hybrid model for introductory pharmacy practice experience (IPPE) delivery., Design: Fourth-year pharmacy students at a satellite campus participated in a 6-week high-fidelity patient simulation series in which small groups of students worked with members of a patient care team to care for patients in the following scenarios: asthma exacerbation, acute decompensated heart failure, and infective endocarditis with a subsequent anaphylactic reaction to the antibiotic. Fourth-year pharmacy students at the main campus who did not participate in the simulation served as a comparator group., Assessment: Students' scores on a knowledge-based post-simulation quiz were significantly higher than scores on the presimulation quiz (p < 0.05). Knowledge retention was significantly higher among the simulation participants than students in the comparator group (p = 0.004). The majority (76%) of students felt more confident "making clinical recommendations to a healthcare provider" after completing the simulation series (p = 0.01)., Conclusion: High-fidelity patient simulation is an effective active-learning strategy to augment IPPEs that allows students to apply clinical skills in a realistic but low-risk patient care setting.
- Published
- 2010
- Full Text
- View/download PDF
26. The amphibian trade: bans or best practice?
- Author
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Garner TW, Stephen I, Wombwell E, and Fisher MC
- Subjects
- Animal Diseases microbiology, Animal Diseases transmission, Animals, Chytridiomycota pathogenicity, Commerce economics, Disease Outbreaks prevention & control, Internationality, Mycoses epidemiology, Amphibians microbiology, Animal Diseases prevention & control, Commerce standards, Disease Outbreaks veterinary, Extinction, Biological, Mycoses prevention & control, Mycoses transmission
- Published
- 2009
- Full Text
- View/download PDF
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