23 results on '"Wilbur Lam"'
Search Results
2. Protocol for the creation and characterization of SARS-CoV-2 variant testing panels using remnant clinical samples for diagnostic assay testing
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Leda Bassit, Heather B. Bowers, Morgan Greenleaf, Courtney Sabino, Eric Lai, Grace Yu, Anne Piantadosi, Ethan Wang, William O’Sick, Kaleb McLendon, Julie A. Sullivan, Raymond F. Schinazi, Gregory L. Damhorst, Wilbur Lam, and Anuradha Rao
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Health Sciences ,Clinical Protocol ,Microbiology ,Molecular Biology ,Science (General) ,Q1-390 - Abstract
Summary: The emergence of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Alpha variant in 2020 demonstrated the need for reanalysis of diagnostic tests to ensure detection of emerging variants. Here, we present a protocol for creating and characterizing SARS-CoV-2 variant testing panels using remnant clinical samples for diagnostic assay testing. We describe steps for characterizing SARS-CoV-2 remnant clinical samples and preparing them into pools and their use in preparing varying quantities of virus. We then detail procedures for verifying variant detection using the resulting sample panel.For complete details on the use and execution of this protocol, please refer to Rao et al.1,2 : Publisher’s note: Undertaking any experimental protocol requires adherence to local institutional guidelines for laboratory safety and ethics.
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- 2024
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3. Complement inhibition can decrease the haemostatic response in a microvascular bleeding model at multiple levels
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Murielle Golomingi, Jessie Kohler, Christina Lamers, Richard B. Pouw, Daniel Ricklin, József Dobó, Péter Gál, Gábor Pál, Bence Kiss, Arthur Dopler, Christoph Q. Schmidt, Elaissa Trybus Hardy, Wilbur Lam, and Verena Schroeder
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haemostasis ,complement system ,MBL-associated serine protease-2 (MASP-2) ,complement C1s ,complement factor D (FD) ,complement C3 ,Immunologic diseases. Allergy ,RC581-607 - Abstract
BackgroundHaemostasis is a crucial process by which the body stops bleeding. It is achieved by the formation of a platelet plug, which is strengthened by formation of a fibrin mesh mediated by the coagulation cascade. In proinflammatory and prothrombotic conditions, multiple interactions of the complement system and the coagulation cascade are known to aggravate thromboinflammatory processes and increase the risk of arterial and venous thrombosis. Whether those interactions also play a relevant role during the physiological process of haemostasis is not yet completely understood. The aim of this study was to investigate the potential role of complement components and activation during the haemostatic response to mechanical vessel injury.MethodsWe used a microvascular bleeding model that simulates a blood vessel, featuring human endothelial cells, perfusion with fresh human whole blood, and an inducible mechanical injury to the vessel. We studied the effects of complement inhibitors against components of the lectin (MASP-1, MASP-2), classical (C1s), alternative (FD) and common pathways (C3, C5), as well as a novel triple fusion inhibitor of all three complement pathways (TriFu). Effects on clot formation were analysed by recording of fibrin deposition and the platelet activation marker CD62P at the injury site in real time using a confocal microscope.ResultsWith the inhibitors targeting MASP-2 or C1s, no significant reduction of fibrin formation was observed, while platelet activation was significantly reduced in the presence of the FD inhibitor. Both common pathway inhibitors targeting C3 or C5, respectively, were associated with a substantial reduction of fibrin formation, and platelet activation was also reduced in the presence of the C3 inhibitor. Triple inhibition of all three activation pathways at the C3-convertase level by TriFu reduced both fibrin formation and platelet activation. When several complement inhibitors were directly compared in two individual donors, TriFu and the inhibitors of MASP-1 and C3 had the strongest effects on clot formation.ConclusionThe observed impact of complement inhibition on reducing fibrin clot formation and platelet activation suggests a role of the complement system in haemostasis, with modulators of complement initiation, amplification or effector functions showing distinct profiles. While the interactions between complement and coagulation might have evolved to support haemostasis and protect against bleeding in case of vessel injury, they can turn harmful in pathological conditions when aggravating thromboinflammation and promoting thrombosis.
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- 2023
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4. Severe acute respiratory syndrome coronavirus 2 vaccine breakthrough infections: A single metro-based testing network experience
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Samantha S. Strickler, Annette Esper, Leona Wells, Anna Wood, Jennifer K. Frediani, Eric Nehl, Jesse J. Waggoner, Paulina A. Rebolledo, Joshua M. Levy, Janet Figueroa, Thanuja Ramachandra, Wilbur Lam, and Gregory S. Martin
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SARS-CoV-2 ,breakthrough infections ,pandemic ,partial vaccinations ,COVID-19 vaccine ,Medicine (General) ,R5-920 - Abstract
ObjectivesUnderstanding the incidence and characteristics that influence severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) vaccine breakthrough infections (VBIs) is imperative for developing public health policies to mitigate the coronavirus disease of 2019 (COVID-19) pandemic. We examined these factors and post-vaccination mitigation practices in individuals partially and fully vaccinated against SARS-CoV-2.Materials and methodsAdults >18 years old were voluntarily enrolled from a single metro-based SARS-CoV-2 testing network from January to July 2021. Participants were categorized as asymptomatic or symptomatic, and as unvaccinated, partially vaccinated, or fully vaccinated. All participants had confirmed SARS-CoV-2 infection based on standard of care (SOC) testing with nasopharyngeal swabs. Variant analysis by rRT-PCR was performed in a subset of time-matched vaccinated and unvaccinated individuals. A subgroup of partially and fully vaccinated individuals with a positive SARS-CoV-2 rRT-PCR was contacted to assess disease severity and post-vaccination mitigation practices.ResultsParticipants (n = 1,317) voluntarily underwent testing for SARS-CoV-2 during the enrollment period. A total of 29.5% of the population received at least one SARS-CoV-2 vaccine (n = 389), 12.8% partially vaccinated (n = 169); 16.1% fully vaccinated (n = 213). A total of 21.3% of partially vaccinated individuals tested positive (n = 36) and 9.4% of fully vaccinated individuals tested positive (n = 20) for SARS-CoV-2. Pfizer/BioNTech mRNA-1273 was the predominant vaccine received (1st dose = 66.8%, 2nd dose = 67.9%). Chronic liver disease and immunosuppression were more prevalent in the vaccinated (partially/fully) group compared to the unvaccinated group (p = 0.003, p = 0.021, respectively). There were more asymptomatic individuals in the vaccinated group compared to the unvaccinated group [n = 6 (10.7%), n = 16 (4.1%), p = 0.045]. CT values were lower for the unvaccinated group (median 24.3, IQR 19.1–30.5) compared to the vaccinated group (29.4, 22.0–33.7, p = 0.004). In the vaccinated group (n = 56), 18 participants were successfully contacted, 7 were lost to follow-up, and 2 were deceased. A total of 50% (n = 9) required hospitalization due to COVID-19 illness. Adherence to nationally endorsed mitigation strategies varied post-vaccination.ConclusionThe incidence of SARS-CoV-2 infection at this center was 21.3% in the partially vaccinated group and 9.4% in the fully vaccinated group. Chronic liver disease and immunosuppression were more prevalent in the vaccinated SARS-CoV-2 positive group, suggesting that these may be risk factors for VBIs. Partially and fully vaccinated individuals had a higher incidence of asymptomatic SARS-CoV-2 and higher CT values compared to unvaccinated SARS-CoV-2 positive individuals.
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- 2022
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5. The RADx Tech Clinical Studies Core: A Model for Academic Based Clinical Studies
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Laura Gibson, Nisha Fahey, Nathaniel Hafer, Bryan Buchholz, Denise Dunlap, Robert Murphy, Chad Achenbach, Cheryl Stone, Rebecca Cleeton, Jared O'Neal, Jennifer Frediani, Miriam Vos, Oliver Brand, Risha Nayee, Leona Wells, Wilbur Lam, Greg Martin, Yukari Manabe, Matthew Robinson, John Broach, Jeffrey Olgin, Bruce Barton, Stephenie Lemon, Allison Blodgett, and David McManus
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SARS-CoV-2 ,COVID-19 ,$in\ vitro$ diagnostics ,point-of-care testing ,rapid acceleration of diagnostics ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Medical technology ,R855-855.5 - Abstract
The National Institutes of Health (NIH) launched the Rapid Acceleration of Diagnostics (RADxSM) Tech initiative to support the development and commercialization of novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) point-of-care test devices. The primary objective of the Clinical Studies Core (CSC) was to perform SARS-CoV-2 device studies involving diverse populations and settings. Within a few months, the infrastructure for clinical studies was developed, including a master protocol, digital study platform, data management system, single IRB, and multi-site partnerships. Data from some studies are being used to support Emergency Use Authorization of novel SARS-CoV-2 test devices. The CSC reduced the typical time and cost of developing medical devices and highlighted the impactful role of academic and NIH partnership in addressing public health needs at a rapid pace during a global pandemic. The structure, deployment, and lessons learned from this experience are widely applicable to future in vitro diagnostic device clinical studies.
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- 2021
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6. RADx Variant Task Force Program for Assessing the Impact of Variants on SARS-CoV-2 Molecular and Antigen Tests
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Richard Creager, John Blackwood, Thomas Pribyl, Leda Bassit, Anuradha Rao, Morgan Greenleaf, Filipp Frank, Wilbur Lam, Eric Ortlund, Raymond Schinazi, Alexander Greninger, Mia Cirrincione, Dale Gort, Emily Kennedy, Adam Samuta, Megan Shaw, Brian Walsh, and Eric Lai
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COVID-19 ,in vitro diagnostics ,mutations ,SARS-CoV-2 ,variants of concern ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Medical technology ,R855-855.5 - Abstract
Goal: Monitoring the genetic diversity and emerging mutations of SARS-CoV-2 is crucial for understanding the evolution of the virus and assuring the performance of diagnostic tests, vaccines, and therapies against COVID-19. SARS-CoV-2 is still adapting to humans and, as illustrated by B.1.1.7 (Alpha) and B.1.617.2 (Delta), lineage dynamics are fluid, and strain prevalence may change radically in a matter of months. The National Institutes of Health's Rapid Acceleration of Diagnostics (RADxSM) initiative created a Variant Task Force to assess the impact of emerging SARS-CoV-2 variants on in vitro diagnostic testing. Working in tandem with clinical laboratories, the FDA, and the CDC, the Variant Task Force uses both in silico modeling and in vitro testing to determine the effect of SARS-CoV-2 mutations on diagnostic molecular and antigen tests. Here, we offer an overview of the approach and activities of the RADx Variant Task Force to ensure test performance against emerging SARS-CoV-2 lineages.
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- 2021
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7. The RADx Tech Test Verification Core and the ACME POCT in the Evaluation of COVID-19 Testing Devices: A Model for Progress and Change
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Eric Nehl, Stacy Heilman, David Ku, David Gottfried, Sarah Farmer, Robert Mannino, Erika Tyburski, Julie Sullivan, Allison Suessmith, Leda Bassit, Janet Figueroa, Anna Wood, Traci Leong, Anuradha Rao, Beverly Rogers, Robert Jerris, Sunita Park, Mark Gonzalez, Jennifer Frediani, Claudia Morris, Joshua Levy, Nils Schoof, Maud Mavigner, John Roback, Kristen Herzegh, Natia Saakadze, Jess Ingersoll, Narayana Cheedarla, Andrew Neish, Bradley Hanberry, Christopher Porter, Annette Esper, Russell Kempker, Paulina Rebolledo, Pamela McGuinness, Frederick Balagadde, Rebecca Gore, Ainat Koren, Nira Pollock, Eugene Rogers, Karl Simin, Nathaniel Hafer, Mary Ann Picard, Chiara Ghezzi, David McManus, Bryan Buchholz, Christina Rostad, Viviana Claveria, Thanuja Ramachandra, Yun F. Wang, CaDeidre Washington, Cheryl Stone, Mark Griffiths, Ray Schinazi, Ann Chahroudi, Miriam Vos, Oliver Brand, Greg Martin, and Wilbur Lam
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COVID-19 ,Device Testing ,RADx ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Medical technology ,R855-855.5 - Abstract
Faced with the COVID-19 pandemic, the US system for developing and testing technologies was challenged in unparalleled ways. This article describes the multi-institutional, transdisciplinary team of the “RADxSM Tech Test Verification Core” and its role in expediting evaluations of COVID-19 testing devices. Expertise related to aspects of diagnostic testing was coordinated to evaluate testing devices with the goal of significantly expanding the ability to mass screen Americans to preserve lives and facilitate the safe return to work and school. Focal points included: laboratory and clinical device evaluation of the limit of viral detection, sensitivity, and specificity of devices in controlled and community settings; regulatory expertise to provide focused attention to barriers to device approval and distribution; usability testing from the perspective of patients and those using the tests to identify and overcome device limitations, and engineering assessment to evaluate robustness of design including human factors, manufacturability, and scalability.
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- 2021
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8. Stiffness based enrichment of leukemia cells using microfluidics
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Muhymin Islam, Abhishek Raj, Brynn McFarland, Hannah Maxine Brink, Jordan Ciciliano, Meredith Fay, David Richard Myers, Christopher Flowers, Edmund K. Waller, Wilbur Lam, Alexander Alexeev, and Todd Sulchek
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Biotechnology ,TP248.13-248.65 ,Medical technology ,R855-855.5 - Abstract
To improve the survival rate of cancer patients, new diagnosis strategies are necessary to detect lower levels of cancer cells before and after treatment regimens. The scarcity of diseased cells, particularly in residual disease after treatment, demands highly sensitive detection approaches or the ability to enrich the diseased cells in relation to normal cells. We report a label-free microfluidic approach to enrich leukemia cells from healthy cells using inherent differences in cell biophysical properties. The microfluidic device consists of a channel with an array of diagonal ridges that recurrently compress and translate flowing cells in proportion to cell stiffness. Using devices optimized for acute T cell leukemia model Jurkat, the stiffer white blood cells were translated orthogonally to the channel length, while softer leukemia cells followed hydrodynamic flow. The device enriched Jurkat leukemia cells from white blood cells with an enrichment factor of over 760. The sensitivity, specificity, and accuracy of the device were found to be > 0.8. The values of sensitivity and specificity could be adjusted by selecting one or multiple outlets for analysis. We demonstrate that low levels of Jurkat leukemia cells (1 in 10 4 white blood cells) could be more quickly detected using flow cytometry by using the stiffness sorting pre-enrichment. In a second mode of operation, the device was implemented to sort resistive leukemia cells from both drug-sensitive leukemia cells and normal white blood cells. Therefore, microfluidic biomechanical sorting can be a useful tool to enrich leukemia cells that may improve downstream analyses.
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- 2020
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9. Microfluidic Sorting of Cells by Viability Based on Differences in Cell Stiffness
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Muhymin Islam, Hannah Brink, Syndey Blanche, Caleb DiPrete, Tom Bongiorno, Nicholas Stone, Anna Liu, Anisha Philip, Gonghao Wang, Wilbur Lam, Alexander Alexeev, Edmund K. Waller, and Todd Sulchek
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Medicine ,Science - Abstract
Abstract The enrichment of viable cells is an essential step to obtain effective products for cell therapy. While procedures exist to characterize the viability of cells, most methods to exclude nonviable cells require the use of density gradient centrifugation or antibody-based cell sorting with molecular labels of cell viability. We report a label-free microfluidic technique to separate live and dead cells that exploits differences in cellular stiffness. The device uses a channel with repeated ridges that are diagonal with respect to the direction of cell flow. Stiff nonviable cells directed through the channel are compressed and translated orthogonally to the channel length, while soft live cells follow hydrodynamic flow. As a proof of concept, Jurkat cells are enriched to high purity of viable cells by a factor of 185-fold. Cell stiffness was validated as a sorting parameter as nonviable cells were substantially stiffer than live cells. To highlight the utility for hematopoietic stem cell transplantation, frozen samples of cord blood were thawed and the purity of viable nucleated cells was increased from 65% to over 94% with a recovery of 73% of the viable cells. Thus, the microfluidic stiffness sorting can simply and efficiently obtain highly pure populations of viable cells.
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- 2017
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10. Respiratory Coinfections in Children With SARS-CoV-2
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Adrianna Westbrook, Tingyu Wang, Kushmita Bhakta, Julie Sullivan, Mark D. Gonzalez, Wilbur Lam, and Christina A. Rostad
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Microbiology (medical) ,Infectious Diseases ,Pediatrics, Perinatology and Child Health - Published
- 2023
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11. The New Normal: Delayed Peak SARS-CoV-2 Viral Loads Relative to Symptom Onset and Implications for COVID-19 Testing Programs
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Jennifer K. Frediani, Richard Parsons, Kaleb B. McLendon, Adrianna L. Westbrook, Wilbur Lam, Greg Martin, and Nira R. Pollock
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BackgroundEarly in the COVID-19 pandemic, peak viral loads coincided with symptom onset. We hypothesized that in a highly immune population, symptom onset might occur earlier in infection, coinciding with lower viral loads.MethodsWe assessed SARS-CoV-2 and influenza A viral loads relative to symptom duration in recently-tested adults. Symptomatic participants ≥16y presenting to testing sites in Georgia (4/2022-4/2023; Omicron variant predominant) provided symptom duration. Nasal swab samples were tested by the Xpert Xpress SARS-CoV-2/Flu/RSV assay and Ct values recorded. Nucleoprotein concentrations in SARS-CoV-2 PCR-positive samples were measured by Single Molecule Array. To estimate hypothetical antigen rapid diagnostic test (Ag RDT) sensitivity on each day after symptom onset, percentages of individuals with Ct value ≤30 or ≤25 were calculated.ResultsOf 621 SARS-CoV-2 PCR-positive individuals (64.1% women, median 40.9y), 556/621 (89.5%) had a history of vaccination, natural infection, or both. By both Ct value and antigen concentration measurements, median viral loads rose from the day of symptom onset and peaked on the fourth day. Ag RDT sensitivity estimates were 35.7-71.4% on the first day, 63.9-78.7% on the third day, and 78.6-90.6% on the fourth day of symptoms.In 74 influenza A PCR-positive individuals (55.4% women; median 35.0y), median influenza viral loads peaked on the second day of symptoms.ConclusionsIn a highly immune adult population, median SARS-CoV-2 viral loads peaked on the fourth day of symptoms. Influenza A viral loads peaked soon after symptom onset. These findings have implications for ongoing use of Ag RDTs for COVID-19 and influenza.Key PointsIn a highly immune adult population, median SARS-CoV-2 viral loads by cycle threshold and antigen measurements peaked on the fourth day of symptoms, with implications for testing practice. In contrast, viral loads for influenza A peaked soon after symptom onset.
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- 2023
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12. Blood coagulation and beyond
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Asim Cengiz Akbulut, Ryanne A. Arisz, Constance C. F. M. J. Baaten, Gaukhar Baidildinova, Aarazo Barakzie, Rupert Bauersachs, Jur ten Berg, Wout W. A. van den Broek, H. C. de Boer, Amandine Bonifay, Vanessa Bröker, Richard J. Buka, Hugo ten Cate, Arina J. ten Cate-Hoek, S. Cointe, Ciro De Luca, Ilaria De Simone, Rocio Vacik Diaz, Françoise Dignat-George, Kathleen Freson, Giulia Gazzaniga, Eric C. M. van Gorp, Anxhela Habibi, Yvonne M. C. Henskens, Aaron F. J. Iding, Abdullah Khan, Gijsje H. Koenderink, Akhil Konkoth, Romaric Lacroix, Trisha Lahiri, Wilbur Lam, Rachel E. Lamerton, Roberto Lorusso, Qi Luo, Coen Maas, Owen J. T. McCarty, Paola E. J. van der Meijden, Joost C. M. Meijers, Adarsh K. Mohapatra, Neta Nevo, Alejandro Pallares Robles, Philippe Poncelet, Christoph Reinhardt, Wolfram Ruf, Ronald Saraswat, Claudia Schönichen, Roger Schutgens, Paolo Simioni, Stefano Spada, Henri M. H. Spronk, Karlygash Tazhibayeva, Jecko Thachil, L. Vallier, Alicia Veninga, Peter Verhamme, Chantal Visser, Steve P. Watson, Philip Wenzel, Ruth A. L. Willems, Anne Willers, Pengyu Zhang, Konstantinos Zifkos, Anton Jan van Zonneveld, Biochemie, RS: Carim - B02 Vascular aspects thrombosis and Haemostasis, RS: Carim - B04 Clinical thrombosis and Haemostasis, RS: Carim - B03 Cell biochemistry of thrombosis and haemostasis, Cardiologie, RS: Carim - B01 Blood proteins & engineering, MUMC+: MA Alg Interne Geneeskunde (9), MUMC+: HVC Trombosezorg (8), MUMC+: HVC Pieken Trombose (9), MUMC+: DA CDL Algemeen (9), Central Diagnostic Lab, MUMC+: HVC Trombosedienst (9), MUMC+: MA Cardiothoracale Chirurgie (3), RS: Carim - V04 Surgical intervention, CTC, MUMC+: MA Med Staf Spec CTC (9), MUMC+: MA Med Staf Artsass Cardiologie (9), MUMC+: MA Med Staf Artsass Interne Geneeskunde (9), MUMC+: MA Med Staf Artsass CTC (9), Experimental Vascular Medicine, Vascular Medicine, ACS - Pulmonary hypertension & thrombosis, and ACS - Amsterdam Cardiovascular Sciences
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Hematology - Abstract
The Fourth Maastricht Consensus Conference on Thrombosis included the following themes. Theme 1: The “coagulome” as a critical driver of cardiovascular disease. Blood coagulation proteins also play divergent roles in biology and pathophysiology, related to specific organs, including brain, heart, bone marrow, and kidney. Four investigators shared their views on these organ-specific topics. Theme 2: Novel mechanisms of thrombosis. Mechanisms linking factor XII to fibrin, including their structural and physical properties, contribute to thrombosis, which is also affected by variation in microbiome status. Virus infection-associated coagulopathies perturb the hemostatic balance resulting in thrombosis and/or bleeding. Theme 3: How to limit bleeding risks: insights from translational studies. This theme included state-of-the-art methodology for exploring the contribution of genetic determinants of a bleeding diathesis; determination of polymorphisms in genes that control the rate of metabolism by the liver of P2Y12 inhibitors, to improve safety of antithrombotic therapy. Novel reversal agents for direct oral anticoagulants are discussed. Theme 4: Hemostasis in extracorporeal systems: the value and limitations of ex vivo models. Perfusion flow chamber and nanotechnology developments are developed for studying bleeding and thrombosis tendencies. Vascularized organoids are utilized for disease modeling and drug development studies. Strategies for tackling extracorporeal membrane oxygenation-associated coagulopathy are discussed. Theme 5: Clinical dilemmas in thrombosis and antithrombotic management. Plenary presentations addressed controversial areas, i.e., thrombophilia testing, thrombosis risk assessment in hemophilia, novel antiplatelet strategies, and clinically tested factor XI(a) inhibitors, both possibly with reduced bleeding risk. Finally, COVID-19-associated coagulopathy is revisited.
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- 2023
13. Are children with sickle cell disease at particular risk from the harmful effects of air pollution? Evidence from a large, urban/peri-urban cohort
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Paul E. George, Alexander Maillis N, Yijing Zhu, Yang Liu, Peter Lane, Wilbur Lam, Joseph Lipscomb, and Stefanie Ebelt
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Oncology ,Pediatrics, Perinatology and Child Health ,Hematology - Abstract
Introduction Pathophysiologic pathways of sickle cell disease (SCD) and air pollution involve inflammation, oxidative stress, and endothelial damage. It is therefore plausible that children with SCD are especially prone to air pollution’s harmful effects. Methods Patient data were collected from a single center, urban/peri-urban cohort of children with confirmed SCD. Daily ambient concentrations of particulate matter (PM ) were collected via satellite-derived remote-sensing technology, and carbon monoxide (CO), nitrogen dioxide (NO ), and ozone from local monitoring stations. We used multivariable regression to quantify associations of pollutant levels and daily counts of emergency department (ED) visits, accounting for weather and time trends. For comparison, we quantified the associations of pollutant levels with daily all-patient (non-SCD) ED visits to our center. Results From 2010-2018, there were 17 731 ED visits by 1740 children with SCD (64.8% HbSS/HbSβ ). Vaso-occlusive events (57.8%), respiratory illness (17.1%), and fever (16.1%) were the most common visit diagnoses. Three-day (lags 0-2) rolling mean PM and CO levels were associated with daily ED visits among those with SCD (PM incident rate ratio (IRR) 1.051 (95% CI 1.010-1.094) per 9.4 µg/m increase; CO 1.088 (1.045-1.132) per 0.5 ppm). NO showed positive associations in secondary analyses; ozone levels were not associated with ED visits. The comparison, all-patient ED visit analyses showed lower IRR for all pollutants. Conclusions Our results suggest short-term air pollution levels as triggers for SCD events and that children with SCD may be more vulnerable to air pollution than those without SCD. Targeted pollution-avoidance strategies could have significant clinical benefits in this population.
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- 2023
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14. A novel mobile health application to support cancer surveillance needs of pediatric patients and families with cancer predisposition syndromes
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Sarah Mitchell, Santiago Arconada Alvarez, Bojana Pencheva, Eleanor Westfall, Comfort Mwalija, Maren Parsell, Morgan Greenleaf, Christopher C Porter, Wilbur Lam, and Robert Mannino G
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Background: At least 5-10% of malignancies occur secondary to an underlying cancer predisposition syndrome (CPS). For patients with a CPS, cancer surveillance is recommended with the goal of identifying malignancy earlier, in a presumably more curable form. Surveillance protocols, including imaging studies, lab work, and procedures, can be complex, differing based on age, gender, and syndrome, which may adversely affect adherence. Mobile health (mHealth) applications have been utilized in the oncology field and could help to facilitate adherence to cancer surveillance protocols. Methods: Applying a user-centered mobile app design approach, patients with a CPS and/or primary caregivers were interviewed to identify current methods for care management and barriers to compliance with recommended surveillance protocols. Broad themes from these interviews informed the design of the mobile app, HomeTown, subsequently evaluated by usability experts. The design was then converted into software code in phases, evaluated by patients and caregivers in an iterative fashion. User population growth and app usage data were assessed. Results: Common themes identified include general distress surrounding surveillance protocol scheduling and results, difficulty remembering medical history, assembling a care team, and seeking resources for self-education. These themes were translated into specific functional app features including push reminders, syndrome-specific surveillance recommendations, ability to annotate visits and results, storage of medical histories, and links to reliable educational resources. Conclusions: Families with CPS demonstrate a desire for mHealth tools to facilitate adherence to cancer surveillance protocols, reduce related distress, relay medical information, and provide educational resources. HomeTown may be a useful tool for engaging this patient population.
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- 2023
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15. Comparison of Mid-turbinate Nasal Swabs, Saliva, and Nasopharyngeal Swabs for SARS-CoV-2 Reverse Transcription-Polymerase Chain Reaction Testing in Pediatric Outpatients
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Miriam B. Vos, Mark D. Gonzalez, Cheryl Stone, Rebecca Cleeton, Janet Figueroa, Robert Jerris, Sunita I. Park, Stacy Heilman, Risha Nayee, Ann Chahroudi, Nils Schoof, Maud Mavigner, Claudia R. Morris, Traci Leong, Amanda Grindle, Adrianna Westbrook, Wilbur Lam, and Beverly B. Rogers
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Reverse Transcriptase Polymerase Chain Reaction ,SARS-CoV-2 ,COVID-19 ,General Medicine ,Reverse Transcription ,Turbinates ,Polymerase Chain Reaction ,Pathology and Forensic Medicine ,Specimen Handling ,Medical Laboratory Technology ,Young Adult ,COVID-19 Testing ,Nasopharynx ,Outpatients ,Humans ,Child ,Saliva - Abstract
Context.— Diagnostic testing for SARS-CoV-2 in symptomatic and asymptomatic children remains integral to care, particularly for supporting return to and attendance in schools. The concordance of SARS-CoV-2 detection in children, using various specimen types, has not been widely studied. Objective.— To compare 3 sample types for SARS-CoV-2 polymerase chain reaction (PCR) testing in children, collected and tested at a single facility. Design.— We prospectively recruited 142 symptomatic and asymptomatic children/young adults into a sample comparison study performed in a single health care system. Each child provided self-collected saliva, and a trained health care provider collected a mid-turbinate nasal swab and nasopharyngeal (NP) swab. Specimens were assayed within 24 hours of collection by using reverse transcription–polymerase chain reaction (RT-PCR) to detect SARS-CoV-2 on a single testing platform. Results.— Concurrently collected saliva and mid-turbinate swabs had greater than 95% positive agreement with NP swabs when obtained within 10 days of symptom onset. Positive agreement of saliva and mid-turbinate samples collected from children with symptom onset >10 days prior, or without symptoms, was 82% compared to NP swab samples. Cycle threshold (Ct) values for mid-turbinate nasal samples more closely correlated with Ct values from NP samples than from saliva samples. Conclusions.— These findings suggest that all 3 sample types from children are useful for SARS-CoV-2 diagnostic testing by RT-PCR, and that concordance is greatest when the child has had symptoms of COVID-19 within the past 10 days. This study provides scientific justification for using sample types other than the NP swab for SARS-CoV-2 testing in pediatric populations.
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- 2022
16. Rapid, High Throughput, Automated Detection Of SARS-Cov-2 Neutralizing Antibodies Against Native-Like Vaccine And Delta Variant Spike Trimers
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Narayanaiah Cheedarla, Hans Verkerke, Sindhu Potlapalli, Kaleb McLendon, Anamika Patel, Filipp Frank, Gregory Damhorst, Huixia Wu, William O'Sick, Daniel Graciaa, Fuad Hudaib, David Alter, Jeannette Bryksin, Eric Ortlund, Jeannette Guarner, Sara Auld, Sarita Shah, Wilbur Lam, Dawn Mattoon, Joseph Johnson, David Wilson, Madhav Dhodapkar, Sean Stowell, Andrew Neish, and John Roback
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Article - Abstract
Traditional cellular and live-virus methods for detection of SARS-CoV-2 neutralizing antibodies (nAbs) are labor- and time-intensive, and thus not suited for routine use in the clinical lab to predict vaccine efficacy and natural immune protection. Here, we report the development and validation of a rapid, high throughput method for measuring SARS-CoV-2 nAbs against native-like trimeric spike proteins. This assay uses a blockade of hACE-2 binding (BoAb) approach in an automated digital immunoassay on the Quanterix HD-X platform. BoAb assays using vaccine and delta variant viral strains showed strong correlation with cell-based pseudovirus and live-virus neutralization activity. Importantly, we were able to detect similar patterns of delta variant resistance to neutralization in samples with paired vaccine and delta variant BoAb measurements. Finally, we screened clinical samples from patients with or without evidence of SARS-CoV-2 exposure by a single-dilution screening version of our assays, finding significant nAb activity only in exposed individuals. In principle, these assays offer a rapid, robust, and scalable alternative to time-, skill-, and cost-intensive standard methods for measuring SARS-CoV-2 nAb levels.
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- 2022
17. Predictive Value of Isolated Symptoms for Diagnosis of Severe Acute Respiratory Syndrome Coronavirus 2 Infection in Children Tested During Peak Circulation of the Delta Variant
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Adrianna L Westbrook, Laura C Benedit, Jennifer K Frediani, Mark A Griffiths, Nabeel Y Khan, Joshua M Levy, Claudia R Morris, Christina A Rostad, Cheryl L Stone, Julie Sullivan, Miriam B Vos, Jean Welsh, Anna Wood, Greg S Martin, Wilbur Lam, and Nira R Pollock
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Microbiology (medical) ,Infectious Diseases ,COVID-19 Testing ,Cough ,Fever ,Rhinorrhea ,SARS-CoV-2 ,Headache ,COVID-19 ,Humans ,Pharyngitis ,Child - Abstract
Background Coronavirus disease 2019 (COVID-19) testing policies for symptomatic children attending US schools or daycare vary, and whether isolated symptoms should prompt testing is unclear. We evaluated children presenting for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) testing to determine if the likelihood of having a positive SARS-CoV-2 test differed between participants with 1 symptom vs ≥2 symptoms, and to examine the predictive capability of isolated symptoms. Methods Participants aged Results Of 602 participants, 21.8% tested positive and 48.7% had a known or suspected close contact. Children reporting 1 symptom (n = 82; odds ratio [OR], 6.00 [95% confidence interval {CI}, 2.70–13.33]) and children reporting ≥2 symptoms (n = 365; OR, 5.25 [95% CI, 2.66–10.38]) were significantly more likely to have a positive COVID-19 test than asymptomatic children (n = 155), but they were not significantly different from each other (OR, 0.88 [95% CI, .52–1.49]). Sensitivity and PPV were highest for isolated fever (33% and 57%, respectively), cough (25% and 32%), and sore throat (21% and 45%); headache had low sensitivity (8%) but higher PPV (33%). Sensitivity and PPV of isolated congestion/rhinorrhea were 8% and 9%, respectively. Conclusions With high Delta variant prevalence, children with isolated symptoms were as likely as those with multiple symptoms to test positive for COVID-19. Isolated fever, cough, sore throat, or headache, but not congestion/rhinorrhea, offered the highest predictive value.
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- 2021
18. Predictive value of isolated symptoms for diagnosis of SARS-CoV-2 infection in children tested during peak circulation of the delta variant
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Adrianna L. Westbrook, Laura C. Benedit, Jennifer K Frediani, Mark A. Griffiths, Nabeel Y. Khan, Joshua M. Levy, Claudia R. Morris, Christina A. Rostad, Cheryl L. Stone, Julie Sullivan, Miriam B. Vos, Jean Welsh, Anna Wood, Greg S. Martin, Wilbur Lam, and Nira R. Pollock
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BackgroundCOVID-19 testing policies for symptomatic children attending U.S. schools or daycare vary, and whether isolated symptoms should prompt testing is unclear. We evaluated children presenting for SARS-CoV-2 testing to determine if the likelihood of having a positive SARS-CoV-2 test differed between participants with one versus ≥2 symptoms, and to examine the predictive capability of isolated symptoms.MethodsParticipants ≤ 18 years presenting for clinical SARS-CoV-2 molecular testing in six sites in urban/suburban/rural Georgia (July-October, 2021; delta variant predominant) were queried about individual symptoms. Participants were classified into three groups: asymptomatic, one symptom only, or ≥2 symptoms. SARS-CoV-2 test results and clinical characteristics of the three groups were compared. Sensitivity, specificity, and positive/negative predictive values (PPV/NPV) for isolated symptoms were calculated by fitting a saturated Poisson model.ResultsOf 602 participants, 21.8% tested positive and 48.7% had a known or suspected close contact. Children reporting one symptom (n=82; OR=6.00, 95% CI: 2.70-13.33) and children reporting ≥2 symptoms (n=365; OR=5.25: 2.66-10.38) were significantly more likely to have a positive COVID-19 test than asymptomatic children (n=155), but they were not significantly different from each other (OR=0.88: 0.52-1.49). Sensitivity/PPV were highest for isolated fever (33%/57%), cough (25%/32%), and sore throat (21%/45%); headache had low sensitivity (8%) but higher PPV (33%). Sensitivity/PPV of isolated congestion/rhinorrhea were 8%/9%.ConclusionsWith high delta variant prevalence, children with isolated symptoms were as likely as those with multiple symptoms to test positive for COVID-19. Isolated fever, cough, sore throat, or headache, but not congestion/rhinorrhea, offered highest predictive value.Key pointsIn an area with high community prevalence of the delta variant, children presenting with one symptom were as likely as those with two or more symptoms to test positive for SARS-CoV-2 infection. Isolated symptoms should be considered in testing decisions.
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- 2021
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19. Lessons Learned from In-Person Conferences in the Times of COVID-19
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Maryam Ehteshami, Carlos León Edgar, Lucia Yunuen Delgado Ayala, Michael Hagan, Greg S. Martin, Wilbur Lam, and Raymond F. Schinazi
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Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,COVID-19 ,scientific meeting ,in-person conferences ,rapid antigen testing ,risk mitigation ,Hep-DART - Abstract
Scientific societies and conference secretariats have recently resumed in-person meetings after a long pause owing to the COVID-19 pandemic. Some safety measures continue to be implemented at these in-person events to limit the spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). With increased numbers of waves of infection, caused by the emergence of SARS-CoV-2 variants, additional information is needed to ensure maximal safety at in-person events. The MEX-DART case study was conducted at the in-person Hep-DART 2021 conference, which was held in Los Cabos, Mexico, in December 2021. Many COVID-19 safety measures were implemented, and incidence of SARS-CoV-2 infection during the conference was tested onsite. In this study, we highlight the specific conditions and safety measures set in place at the conference. In addition to vaccination requirements, social distancing, and mask wearing, daily rapid testing was implemented for the duration of the conference. At the end of the 4-day meeting, none of the 166 delegates (and family members attending the conference) had tested antigen positive for SARS-CoV-2. Two delegates tested positive in the week after the conference; the timing of their positive test result suggests that they contracted the virus during their travels home or during postconference vacationing. We believe that this model can serve as a helpful template for organizing future in-person meetings in the era of COVID-19 and any other respiratory virus pandemics of the future. While the outcomes of this case study are encouraging, seasonal surges in respiratory virus infections such as SARS-CoV-2, RSV, and influenza virus incidence suggest that continued caution is warranted.
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- 2022
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20. (Invited) High-Throughput Single Cell Nanomechanical Measurements
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Renee Copeland, Oluwamayokun Oshinowo, Benjamin Brainard, Carolyn Bennett, Wilbur Lam, and David Richard Myers
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Microsystems have the potential to make an enormous contribution to biomedical and clinical settings. Fully realizing the capabilities of this established technology lies in designing new robust microsystems capable of answering clinically relevant problems. Here, I discuss the creation of the platelet contraction cytometer, a tool that has led to important insights into our understanding of the biomechanical process of clotting and may even represent a new type of diagnostic based on biophysics. Platelets constantly circulate in the bloodstream and respond to injury to prevent excessive blood loss. At a wound, platelets will aggregate on exposed collagen and undergo muscle-like contraction with nascent fibrin polymers to mechanically stabilize the clot and stem hemorrhage. During clot contraction, platelets can dramatically shrink the fibrin mesh and increase the clot stiffness by an order of magnitude. Previous studies have established that the clot stiffness is linked to disease, as overly softened and stiffened clots are associated with bleeding and thrombotic disorders, respectively. However, defining the reasons that clot mechanical properties change in disease has remained difficult, as clots are inherently complex and heterogeneous, and all existing bulk measurements depend on contributions from fibrin stiffness, fibrin architecture, red blood cell incorporation, and platelet contraction. Moreover, changes to the microenvironmental stiffness, biochemical concentration, and shear are known to alter platelet force or behavior at the single cell level. To that end, we developed a “platelet contraction cytometer (PCC)” that simultaneously measures the contractile force of hundreds of individual adherent platelets across the physiological range of mechanical microenvironments within a clot. Within the PCC, a single platelet attaches, spreads, and applies contractile force to a pair of fibrinogen microdots that are attached to a moveable, spring-like, surface. Since the applied platelet contractile force is directly proportional to the microdot displacement, the force may be calculated from a single fluorescent image of the platelet. As this device is microfabricated, thousands of microdots may be created on a single device to enable high-throughput measurements that are performed in a highly controlled mechanical, biochemical, and shear environment. Using this device, we have defined the range of forces that platelets apply within a clot and shown that mechanical and biochemical cues can synergistically combine to create highly contractile platelets. Moreover, we have been able to probe the pathways involved in contraction and shown which pathways control how platelets apply force in response to local stiffness. This device has even enabled new comparative studies that examine how platelet force varies between humans and other animal species, and may lead to new biological insights into how contractile force is generated and regulated. In addition to enabling mechanistic studies, we have collected data showing that platelet contraction cytometry may represent a new class diagnostic that is based on biophysics. In particular, our studies have focused on immune thrombocytopenia (ITP), a disease which is characterized by low platelet counts in the absence of any other cause. Approximately 10% of these patients will have major bleeding issues, but no existing biomarker can determine which patients are at risk for bleeding and whether the disease will self-resolve or become chronic. In a small cohort of patients, we have found that all patients with bleeding and/or bruising symptoms also have significantly lower platelet contractile forces. By defining an average force cutoff value of 26nN, we found that low forces identified bleeding in ITP with 100% sensitivity and 89.4% specificity. Importantly, since the PCC measures single platelets in high throughput, it also provides information on the distribution of forces applied by platelets and has helped to identify unique subpopulations of platelets in ITP. Healthy individuals have a normal distribution of contractile forces with a single peak, while ITP patients tend to have a bimodal distribution with two prominent peaks, one with a lower contractile force and one with a higher contractile force. Surprisingly, patients with bleeding symptoms are missing the highly contractile peak and suggests that the lack of highly contractile platelets may contribute to bleeding. Taken together, this work highlights the incredible potential for microsystems in solving clinical challenges. Designing a device capable of measuring single platelet forces led to new insights into the basic biophysics of platelets and clotting and may also represent a new type of diagnostic.
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- 2019
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21. Platelet-like particles for wound-triggered hemostasis in patients at high risk for bleeding during cardiac surgery
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Riley, Hannan, primary, Byungwook, Ahn, additional, Wilbur, Lam, additional, Andrew, Lyon, additional, Nina, Guzzetta, additional, Thomas, Barker, additional, and Ashley, Brown, additional
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- 2016
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22. First Aid for the Pediatric Boards, Second Edition
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Tao Le, Wilbur Lam, Shervin Rabizadeh, Alan Schroeder, Kimberly Vera, Tao Le, Wilbur Lam, Shervin Rabizadeh, Alan Schroeder, and Kimberly Vera
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Apply the proven First Aid formula for exam success!'This review is intended for residents and pediatric practitioners, but it also would be useful for medical students on pediatrics rotations. The book covers all topics in pediatrics. Genetics, nephrology, and neonatology are covered well, as is gastroenterology. It uses charts and tables for high-yield and intense studying. 3 Stars.'--Doody's Review Service This is the new edition of the physician-to-physician, step-by-step guide to passing the pediatrics board exam. Written by veteran First Aid editor Tao Le and a team of former residents from Johns Hopkins University who recently took the exam, this book covers what to expect on the exam, how to register and succeed, and must-know high-yield facts. Features new to this edition include a full-color photo insert and mini-cases that frame clinical discussions for better retention. The summary of high-yield facts make it the ideal last minute review book. Features: Easy-to-remember summaries of the most frequently tested topics Hundreds of high-yield algorithms, clinical images, tables, and illustrations Margin notes reinforce must-know information Mnemonics and clinical pearls make learning and memorization fast, fun, and easy Mini-cases highlight commonly tested patient presentations and scenarios 12 pages of full-color images Resident-tested tips on how to register, prepare for, and ace the exam Completely revised based on reader feedback -- so you know you are studying the most up-to-date and relevant material possible A true'insider's guide'for in-service, boards, and recertification! Complete coverage of all the must know topics: Introduction to the Pediatric Boards, Adolescent/Gynecology/Genital, Allergy/Immunology/Rheumatology, Cardiology, Dermatology, Emergency/Critical Care, Endocrinology, GI/Nutrition; Growth, Development, and Behavior; Hematology/Oncology, Human Genetics and Development, Infectious Diseases, Muskuloskeletal, Neonatology, Neurology, Preventive Pediatrics and Ethics, Pulmonology, Renal/Urinary Tract
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- 2010
23. Microfluidic cellular enrichment and separation through differences in viscoelastic deformation.
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Gonghao Wang, Crawford, Kaci, Turbyfield, Cory, Wilbur Lam, Alexeev, Alexander, and Sulchek, Todd
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MICROFLUIDICS ,VISCOELASTICITY ,LEUCOCYTES ,ATOMIC force microscopy ,LEUKEMIA ,CELL lines - Abstract
We report a microfluidic approach to separate and enrich a mixture of two cell types based on differences in cell viscoelastic behavior during repeated compressions and relaxation events. As proof of concept, we demonstrate that variations in viscoelasticity affect the flow trajectory of one type of leukemia cell line (K562) in relation to another leukemia cell line (HL60) as well as healthy leukocytes. These differences in cell trajectory can be utilized to enrich and sort K562 cells from HL60 cells and leukocytes. The microfluidic device utilizes periodic, diagonal ridges to compress and translate the cells laterally perpendicular to channel axis. The ridge spacing is tuned to allow relaxation of the K562 cells but not the HL60 cells or leukocytes. Therefore, the periodic compression laterally translates weakly viscous cells, while highly viscous cells respond to hydrodynamic circulation forces generated by the slanted ridges. As a result, cell sorting has strong dependency on cell viscosity. We use atomic force microscopy and high-speed optical microscopy to measure cell stiffness, cell relaxation rate constant, and cell size for all cell types. With properly designed microfluidic channels, we can optimize the enrichment of K562 cells from HL60 and leukocytes. [ABSTRACT FROM AUTHOR]
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- 2015
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