309 results on '"Wei-Dong Yang"'
Search Results
2. Synergistic and stepwise treatment of resveratrol and catechol in Haematococcus pluvialis for the overproduction of biomass and astaxanthin
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Jia-Fan Qiu, Yu-Cheng Yang, Ruo-Yu Li, Yu-Hu Jiao, Jin-Hua Mou, Wei-Dong Yang, Carol Sze Ki Lin, Hong-Ye Li, and Xiang Wang
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Haematococcus pluvialis ,Astaxanthin ,Resveratrol ,Catechol ,Stepwise cultivation strategies ,Biotechnology ,TP248.13-248.65 ,Fuel ,TP315-360 - Abstract
Abstract To increase the production of biomass and astaxanthin from Haematococcus pluvialis to meet the high market demand for astaxanthin, this study recruited two typical and negligible phytohormones (namely resveratrol and catechol) for the stepwise treatments of H. pluvialis. It was found that the hybrid and sequential treatments of resveratrol (200 μmol) and catechol (100 μmol) had achieved the maximum astaxanthin content at 33.96 mg/L and 42.99 mg/L, respectively. Compared with the hybrid treatment, the physiological data of H. pluvialis using the sequential strategy revealed that the enhanced photosynthetic performance via the Calvin cycle by RuBisCO improved the biomass accumulation during the macrozooid stage; meanwhile, the excessive ROS production had occurred to enhance astaxanthin production with the help of NADPH overproduction during the hematocyst stage. Overall, this study provides improved knowledge of the impacts of phytohormones in improving biomass and astaxanthin of H. pluvialis, which shed valuable insights for advancing microalgae-based biorefinery.
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- 2024
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3. Polystyrene microplastics exacerbated the toxicity of okadaic acid to the small intestine in mice
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Hong-Jia Huang, Yang Liu, Xiang Wang, Lu Huang, Da-Wei Li, Hong-Ye Li, and Wei-Dong Yang
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Microplastic ,Okadaic acid ,Polystyrene ,Combined toxicity ,Oxidative stress ,Environmental pollution ,TD172-193.5 ,Environmental sciences ,GE1-350 - Abstract
Microplastics (MPs) and okadaic acid (OA) are known to coexist in marine organisms, potentially impacting humans through food chain. However, the combined toxicity of OA and MPs remains unknown. In this study, mice were orally administered OA at 200 μg/kg bw and MPs at 2 mg/kg bw. The co-exposure group showed a significant increase in malondialdehyde (MDA) content and significant decreases in superoxide dismutase (SOD) activity and glutathione (GSH) level compared to the control, MPs and OA groups (p < 0.05). Additionally, the co-exposure group exhibited significantly higher levels of IL-1β and IL-18 compared to other groups (p < 0.05). These results demonstrated that co-exposure to MPs and OA induces oxidative stress and exacerbates inflammation. Histological and cellular ultrastructure analyses suggested that this combined exposure may enhance gut damage and compromise barrier integrity. Consequently, the concentration of OA in the small intestine of the co-exposure group was significantly higher than that in the OA group. Furthermore, MPs were observed in the lamina propria of the gut in the co-exposure group. Transcriptomic analysis revealed that the co-exposure led to increased expression of certain genes related to the NF-κB/NLRP3 pathway compared to the OA and MPs groups. Overall, this combined exposure may disrupt the intestinal barrier, and promote inflammation through the NF-κB/NLRP3 pathway. These findings provide precious information for the understanding of health risks associated with MPs and phycotoxins.
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- 2024
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4. Purple acid phosphatase promoted hydrolysis of organophosphate pesticides in microalgae
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Xiang Wang, Guo-Hui He, Zhen-Yao Wang, Hui-Ying Xu, Jin-Hua Mou, Zi-Hao Qin, Carol Sze Ki Lin, Wei-Dong Yang, Yalei Zhang, and Hong-Ye Li
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Biodegradation ,Lipid accumulation ,Organophosphate pesticide ,Phaeodactylum tricornutum ,Purple acid phosphatase ,Environmental sciences ,GE1-350 ,Environmental technology. Sanitary engineering ,TD1-1066 - Abstract
When organophosphate pesticides (OPs) are not used and handled in accordance with the current rules and standards, it results in serious threats to the aquatic environment and human health. Phaeodactylum tricornutum is a prospective microalgae-based system for pollutant removal and carbon sequestration. Genetically engineered P. tricornutum, designated as the OE line (endogenously expressing purple acid phosphatase 1 [PAP1]), can utilize organic phosphorus for cellular metabolism. However, the competencies and mechanisms of the microalgae-based system (namely the OE line of P. tricornutum) for metabolizing OPs remain to be addressed. In this study, the OE line exhibited the effective biodegradation competencies of 72.12% and 68.2% for 30 mg L−1 of dichlorvos and 50 mg L−1 of glyphosate, accompanied by synergistic accumulations of biomass (0.91 and 0.95 g L−1) and lipids (32.71% and 32.08%), respectively. Furthermore, the biodiesel properties of the lipids from the OE line manifested a high potential as an alternative feedstock for microalgae-based biofuel production. A plausible mechanism of OPs biodegraded by overexpressed PAP1 is that sufficient inorganic P for adenosine triphosphate and concurrent carbon flux for the reduced form of nicotinamide adenine dinucleotide phosphate biosynthesis, which improved the OP tolerance and biodegradation competencies by regulating the antioxidant system, delaying programmed cell death and accumulating lipids via the upregulation of related genes. To sum up, this study demonstrates a potential strategy using a genetically engineered strain of P. tricornutum to remove high concentrations of OPs with the simultaneous production of biomass and biofuels, which might provide novel insights for microalgae-based pollutant biodegradation.
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- 2024
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5. Systematic dissection of genomic features determining the vast diversity of conotoxins
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Jian-Wei Zheng, Yang Lu, Yu-Feng Yang, Dan Huang, Da-Wei Li, Xiang Wang, Yang Gao, Wei-Dong Yang, Yuanfang Guan, and Hong-Ye Li
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Conus ,Conotoxin ,Gene feature ,Transposon element ,Introgression ,Biotechnology ,TP248.13-248.65 ,Genetics ,QH426-470 - Abstract
Abstract Background Conus, a highly diverse species of venomous predators, has attracted significant attention in neuroscience and new drug development due to their rich collection of neuroactive peptides called conotoxins. Recent advancements in transcriptome, proteome, and genome analyses have facilitated the identification of conotoxins within Conus’ venom glands, providing insights into the genetic features and evolutionary patterns of conotoxin genes. However, the underlying mechanism behind the extraordinary hypervariability of conotoxins remains largely unknown. Results We analyzed the transcriptomes of 34 Conus species, examining various tissues such as the venom duct, venom bulb, and salivary gland, leading to the identification of conotoxin genes. Genetic variation analysis revealed that a subset of these genes (15.78% of the total) in Conus species underwent positive selection (Ka/Ks > 1, p
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- 2023
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6. Exposure to okadaic acid could disrupt the colonic microenvironment in rats
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Yang Liu, Tian-qing Yuan, Jian-wei Zheng, Da-wei Li, Yu-hu Jiao, Hong-ye Li, Rui-man Li, and Wei-dong Yang
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Okadaic acid ,Gut bacteria ,Colonic epithelium ,Intestinal barrier ,Environmental pollution ,TD172-193.5 ,Environmental sciences ,GE1-350 - Abstract
Okadaic acid (OA) is one of the most prevalent marine phycotoxin with complex toxicity, which can lead to toxic symptoms such as diarrhea, vomiting, nausea, abdominal pain, and gastrointestinal discomfort. Studies have shown that the main affected tissue of OA is digestive tract. However, its toxic mechanism is not yet fully understood. In this study, we investigated the changes that occurred in the epithelial microenvironment following OA exposure, including the epithelial barrier and gut bacteria. We found that impaired epithelial cell junctions, mucus layer destruction, cytoskeletal remodeling, and increased bacterial invasion occurred in colon of rats after OA exposure. At the same time, the gut bacteria decreased in the abundance of beneficial bacteria and increased in the abundance of pathogenic bacteria, and there was a significant negative correlation between the abundance of pathogenic bacteria represented by Escherichia/Shigella and animal body weight. Metagenomic analysis inferred that Escherichia coli and Shigella spp. in Escherichia/Shigella may be involved in the process of cytoskeletal remodeling and mucosal layer damage caused by OA. Although more evidence is needed, our results suggest that opportunistic pathogens may be involved in the complex toxicity of OA during OA-induced epithelial barrier damage.
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- 2023
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7. Morphological changes of the root apex in anterior teeth with periapical periodontitis: an in-vivo study
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Chen-chen Zhang, Ya-jing Liu, Wei-dong Yang, Qian-nan Zhang, Ming-zhu Zha, Shan-hui Wen, and Qi Wang
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Periapical periodontitis ,Anterior teeth ,Cone-beam computed tomography ,3D reconstruction ,Root apex morphology ,Dentistry ,RK1-715 - Abstract
Abstract Introduction The aim was to analyze the morphological changes of root apex in anterior teeth with periapical periodontitis. Methods 32 untreated anterior teeth with periapical periodontitis were enrolled, compared with the healthy contralateral teeth. Two-dimensional measurement of Cone-beam computed tomography was used to determine the location and measure diameter of the apical constriction according to Schell’s methods. An open-source software (3D Slicer) was used to reconstruct the teeth. The apical constriction form was analysis according to Schell’s topography. The distances of apical constriction to apical foramen and anatomical apex were measured respectively. Results The difference value between buccolingual and mesiodistal diameter was (0.06 ± 0.09) mm and (0.04 ± 0.04) mm in periapical periodontitis and controls (p
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- 2022
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8. Porous and Ultra-Flexible Crosslinked MXene/Polyimide Composites for Multifunctional Electromagnetic Interference Shielding
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Zhi-Hui Zeng, Na Wu, Jing-Jiang Wei, Yun-Fei Yang, Ting-Ting Wu, Bin Li, Stefanie Beatrice Hauser, Wei-Dong Yang, Jiu-Rong Liu, and Shan-Yu Zhao
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MXene ,Polyimide ,Electromagnetic interference shielding ,Heater ,Sensor ,Technology - Abstract
Abstract Lightweight, ultra-flexible, and robust crosslinked transition metal carbide (Ti3C2 MXene) coated polyimide (PI) (C-MXene@PI) porous composites are manufactured via a scalable dip-coating followed by chemical crosslinking approach. In addition to the hydrophobicity, anti-oxidation and extreme-temperature stability, efficient utilization of the intrinsic conductivity of MXene, the interfacial polarization between MXene and PI, and the micrometer-sized pores of the composite foams are achieved. Consequently, the composites show a satisfactory X-band electromagnetic interference (EMI) shielding effectiveness of 22.5 to 62.5 dB at a density of 28.7 to 48.7 mg cm−3, leading to an excellent surface-specific SE of 21,317 dB cm2 g−1. Moreover, the composite foams exhibit excellent electrothermal performance as flexible heaters in terms of a prominent, rapid reproducible, and stable electrothermal effect at low voltages and superior heat performance and more uniform heat distribution compared with the commercial heaters composed of alloy plates. Furthermore, the composite foams are well attached on a human body to check their electromechanical sensing performance, demonstrating the sensitive and reliable detection of human motions as wearable sensors. The excellent EMI shielding performance and multifunctionalities, along with the facile and easy-to-scalable manufacturing techniques, imply promising perspectives of the porous C-MXene@PI composites in next-generation flexible electronics, aerospace, and smart devices.
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- 2022
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9. Toxicity and underlying mechanism of the toxic dinoflagellate Gambierdiscus caribaeus to the fish Oryzias melastigma
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Li Li, Shuang Chen, Si-yuan Xu, Da-wei Li, Hong-ye Li, and Wei-dong Yang
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Gambierdiscus caribaeus ,Ciguatera fish poisoning ,Food chain ,Oryzias melastigma ,Environmental pollution ,TD172-193.5 ,Environmental sciences ,GE1-350 - Abstract
Gambierdiscus spp. is mainly responsible for the ciguatera fish poisoning (CFP) around the world. The gambiertoxin produced by Gambierdiscus can be passed through the food chain to form ciguatoxins (CTXs) that cause ciguatoxins poisoning. However, the toxic effects of Gambierdiscus on fish through the food chain and related mechanism remains unclear. In this study, the toxicity of Gambierdiscus caribaeus on the marine medaka (Oryzias melastigma) was investigated, where the simulated food chain toxic algae-food organism-fish (G. caribaeus-Artemia metanauplii-O. melastigma) was set. The results showed that direct or indirect exposure through the food chain of G. caribaeus could affect the swimming behaviour of O. melastigma, manifested as decreased swimming performance and spontaneous abnormal swimming behaviours. Histological observation showed that direct or indirect exposure of G. caribaeus caused different degrees of pathological damage to the gills, intestine and liver tissues of O. melastigma. Transcriptome sequencing and RT-qPCR demonstrated that G. caribaeus exposure could trigger a series of physiological and biochemical responses, mainly reflected in energy metabolism, reproductive system, neural activity, immune stress and drug metabolism in marine medaka. Our finding may provide novel insight into the toxicity of Gambierdiscus on fish.
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- 2022
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10. TAG pathway engineering via GPAT2 concurrently potentiates abiotic stress tolerance and oleaginicity in Phaeodactylum tricornutum
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Xiang Wang, Si-Fen Liu, Ruo-Yu Li, Wei-Dong Yang, Jie-Sheng Liu, Carol Sze Ki Lin, Srinivasan Balamurugan, and Hong-Ye Li
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Abiotic stress tolerance ,Diatom ,Glycerol-3-phosphate acyltransferase ,Lipid hyperaccumulation ,Lipid remodeling ,Fuel ,TP315-360 ,Biotechnology ,TP248.13-248.65 - Abstract
Abstract Background Despite the great potential of marine diatoms in biofuel sector, commercially viable biofuel production from native diatom strain is impractical. Targeted engineering of TAG pathway represents a promising approach; however, recruitment of potential candidate has been regarded as critical. Here, we identified a glycerol-3-phosphate acyltransferase 2 (GPAT2) isoform and overexpressed in Phaeodactylum tricornutum. Results GPAT2 overexpression did not impair growth and photosynthesis. GPAT2 overexpression reduced carbohydrates and protein content, however, lipid content were significantly increased. Specifically, TAG content was notably increased by 2.9-fold than phospho- and glyco-lipids. GPAT2 overexpression elicited the push-and-pull strategy by increasing the abundance of substrates for the subsequent metabolic enzymes, thereby increased the expression of LPAAT and DGAT. Besides, GPAT2-mediated lipid overproduction coordinated the expression of NADPH biosynthetic genes. GPAT2 altered the fatty acid profile in TAGs with C16:0 as the predominant fatty acid moieties. We further investigated the impact of GPAT2 on conferring abiotic stress, which exhibited enhanced tolerance to hyposaline (70%) and chilling (10 ºC) conditions via altered fatty acid saturation level. Conclusions Collectively, our results exemplified the critical role of GPAT2 in hyperaccumulating TAGs with altered fatty acid profile, which in turn uphold resistance to abiotic stress conditions.
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- 2020
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11. Association analysis between the tag single nucleotide polymorphisms of DENND1A and the risk of polycystic ovary syndrome in Chinese Han women
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Ya-nan Zhu, Yi-ting Zhang, Qin Liu, Shan-mei Shen, Xiang Zou, Yun-xia Cao, Wen-jun Wang, Long Yi, Qian Gao, Wei-dong Yang, and Yong Wang
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Polycystic ovary syndrome ,Genetic polymorphism ,DENND1A ,Internal medicine ,RC31-1245 ,Genetics ,QH426-470 - Abstract
Abstract Background The DENND1A gene is one of the most important sites associated with polycystic ovary syndrome (PCOS). We attempted to analyze the correlation between five single nucleotide polymorphisms (SNPs) in the DENND1A gene and the development of PCOS. Methods A total of 346 PCOS patients and 225 normal ovulatory women were involved in the case-control study. Clinical variables and hormones were recorded. According to the Hap Map database, five tagging SNPs (rs2479106, rs2768819, rs2670139, rs2536951 and rs2479102) in the DENND1A gene were identified. The TaqMan probe and the PCR–RFLP (restriction fragment length polymorphism) methods were used for revealing these genotypes. TaqMan Genotype Software was used to analyze the alleles of the five SNPs. Results Linkage disequilibrium and the gene frequency analysis demonstrated that the CCGGG haplotype might increase the risk of PCOS (P = 0.038, OR = 1.89, 95% CI = 1.027–3.481). Significant differences were found in genotypic and allelic distributions at the rs2536951 and rs2479102 loci between PCOS women and controls (P
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- 2020
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12. Possible Role of Docosahexaenoic Acid in Response to Diarrhetic Shellfish Toxins in the Mussel Perna viridis
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Kuan-Kuan Yuan, Zi-Min Chen, Ya-Xin Liu, Hong-Ye Li, and Wei-Dong Yang
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diarrhetic shellfish toxins ,DHA ,esterification ,Nrf2 signaling pathway ,qPCR ,histopathology ,Biology (General) ,QH301-705.5 - Abstract
Marine bivalves are rich in docosahexaenoic acid (DHA), a polyunsaturated fatty acid known to be beneficial for human health; however, the potential role of DHA in protecting shellfish from the toxicity of diarrhetic shellfish toxins (DSTs) remains poorly understood. Here, we aimed to study the effect of DHA on the response of the bivalve, Perna viridis, to DSTs by using LC-MS/MS, RT-qPCR, and histological examination. In this study, we observed that the DHA content decreased significantly with esterification of DSTs in the digestive gland of the mussel P. viridis after 96 h of exposure to Prorocentrum lima, a DST-producing dinoflagellate. The addition of DHA significantly increased the esterification level of DSTs and increased the expression of Nrf2 signaling pathway-related genes and enzyme activities, alleviating the damage of DSTs to digestive glands. These results suggested that DHA may mediate the esterification of DSTs and activation of the Nrf2 signaling pathway in P. viridis to protect mussels from the toxic effects of DSTs. This study may provide new insights regarding the response of bivalves to DSTs and lay the foundation for uncovering the role of DHA in environmental adaptation of bivalves.
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- 2023
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13. Responses of JNK signaling pathway to the toxic dinoflagellate Prorocentrum lima in the mussel Perna viridis
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Jin-jin Lv, Kuan-kuan Yuan, Mi-yu Lu, Zheng-bing He, Hong-ye Li, and Wei-dong Yang
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Bivalve ,DSP toxins ,JNK ,Apoptosis ,Nrf2 ,Environmental pollution ,TD172-193.5 ,Environmental sciences ,GE1-350 - Abstract
Diarrheic shellfish poisoning (DSP) toxins are widely distributed over the world, causing diarrhea, vomiting, and even tumor in human. However, bivalves, the main carrier of the DSP toxins, have some tolerant mechanisms to DSP toxins, though it remains unclear. In this study, we scrutinized the role of Jun N-terminal kinases (JNK) in tolerance of DSP toxins and the relationship between JNK, apoptosis and nuclear factor E2-related factor/antioxidant response element (Nrf2/ARE) pathways. We found that the phosphorylated level of JNK protein was significantly increased both in hemocytes (6 h) and gills (3 h) of the mussel Perna viridis after short-term exposure to DSP toxins-producing dinoflagellate Prorocentrum lima. Exposure of P. lima induced oxidative stress in mussels. Hemocytes and gills displayed different sensitivities to the cytotoxicity of DSP toxins. Exposure of P. lima activated caspase-3 and induced apoptosis in gills but did not induce caspase-3 and apoptosis in hemocytes. The short-term exposure of P. lima could activate Nrf2/ARE signaling pathway in hemocytes (6 h), while longer-term exposure could induce glutathione reductase (GR) expression in hemocytes (96 h) and glutathione-S-transferases (GST) in gills (96 h). Based on the phylogenetic tree of Nrf2, Nrf2 in P. viridis was closely related to that in other mussels, especially Mytilus coruscus, but far from that in Mus musculus. The most likely phosphorylated site of Nrf2 in the mussels P. viridis is threonine 504 for JNK, which is different from that in M. musculus. Taken all together, the tolerant mechanism of P. viridis to DSP toxins might be involved in JNK and Nrf2/ARE signaling pathways, and JNK play a key role in the mechanism. Our findings provide a new clue to further understand tolerant mechanisms of bivalves to DSP toxins.
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- 2021
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14. Allelopathy of Alexandrium pacificum on Thalassiosira pseudonana in laboratory cultures
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Xiao-Tong Mao, Rui-Xia Xu, Yu Gao, Hong-Ye Li, Jie-Sheng Liu, and Wei-Dong Yang
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Alexandrium pacificum ,Thalassiosira pseudonana ,Photosynthesis ,Nutrient absorption ,Antioxidant system ,Environmental pollution ,TD172-193.5 ,Environmental sciences ,GE1-350 - Abstract
Alexandrium pacificum is a toxin-producing dinoflagellate with allelopathic effects. The elucidation of allelopathic mechanism of A. pacificum is of great significance for understanding A. pacificum blooms. To this end, using the model diatom Thalassiosira pseudonana as a target species, we observed changes in physiological, biochemical and gene transcription of T. pseudonana upon being co-cultured with A. pacificum. We found reciprocal effects between A. pacificum and T. pseudonana, and corroborated A. pacificum’s allelopathy on T. pseudonana by observing inhibitory effects of filtrate from A. pacificum culture on the growth of T. pseudonana. We also found that co-culturing with A. pacificum, the expression of T. pseudonana genes related to photosynthesis, oxidative phosphorylation, antioxidant system, nutrient absorption and energy metabolism were drastically influenced. Coupled with the alterations in Fv/Fm (the variable/maximum fluorescence ratio), activity of superoxide dismutase, contents of malondialdehyde, neutral lipid and total protein in T. pseudonana co-cultured with A. pacificum, we propose that A. pacificum allelopathy could reduce the efficiency of photosynthesis and energy metabolism of T. pseudonana and caused the oxidative stress, while the nutrient absorption was also affected by allelopathic effects. The resultant data potentially uncovered the allelopathic molecular mechanism of A. pacificum to model alga T. pseudonana. The changes in nutrient uptake and even energy metabolism in T. pseudonana, as an adaptation to environmental conditions, may prevent it from stress-related injuries. Our finding might advance the understanding of allelopathic mechanism of A. pacificum.
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- 2021
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15. Toxic Responses of Different Shellfish Species after Exposure to Prorocentrum lima, a DSP Toxins Producing Dinoflagellate
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Mei-Hua Ye, Da-Wei Li, Qiu-Die Cai, Yu-Hu Jiao, Yang Liu, Hong-Ye Li, and Wei-Dong Yang
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DSP toxins ,Prorocentrum lima ,Crassostrea gigas ,Mytilus coruscus ,Tegillarca granosa ,Nrf2 signaling pathway ,Medicine - Abstract
Prorocentrum lima is a global benthic dinoflagellate that produces diarrhetic shellfish poisoning (DSP) toxins, which can be ingested by filter-feeding bivalves, and eventually pose a great threat to human health through food chain. After being exposed to P. lima, different bivalves may accumulate various levels of DSP toxins and display different toxic responses. However, the underlying mechanism remains unclear. Here, we found that the content of okadaic acid-equivalents (OA-eq) varied in the digestive glands of the three bivalves including Crassostrea gigas, Mytilus coruscus and Tegillarca granosa after P. lima exposure. The degree of esterification of OA-eq in the three bivalves were opposite to the accumulation of OA-eq. The digestive gland tissues of the three bivalve species were damaged to different degrees. The transcriptional induction of Nrf2 targeted genes such as ABCB1 and GPx indicates the functionality of Nrf2 pathway against DSP toxins in bivalves. The oyster could protect against DSP toxins mainly through ABC transporters and esterification, while the mussel and clam reduce the damage induced by DSP toxins mainly by regulating the expression of antioxidant genes. Our findings may provide some explanations for the difference in toxic response to DSP toxins in different shellfish.
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- 2022
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16. Plastidial and ER Triacylglycerol Biosynthesis in a Growth Phase-Dependent Manner in the Heterokont Nannochloropsis oceanica
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Dan Huang, Da-Wei Li, Srinivasan Balamurugan, Jian-Wei Zheng, Wan-Jun Liu, Li-Gong Zou, Wei-Dong Yang, Jie-Sheng Liu, and Hong-Ye Li
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growth phase ,lipogenesis ,triacylglycerol assembly ,fatty acid biosynthesis ,Nannochloropsis oceanica ,Science ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
Though microalgae have been considered the potential resource for lipid production, native strains are unable to meet the industrial demand. Here, we aim to uncover the complex molecular relationship between algal growth and lipid accumulation. Transcriptomic analysis revealed the crucial role of plastidial fatty acid and triacylglycerol (TAG) biosynthetic machinery in lipid overproduction. The expression of key fatty acid biosynthetic genes such as acetyl-CoA carboxylase (ACCase), malonyl CoA−acyl carrier protein transacylase (MCAT), 3-ketoacyl synthase (KAS), 3-ketoacyl-ACP reductase (KAR) increased during day 10–13 of cultivation, particularly plastidial TAG biosynthetic genes substantially increased. However, expression of genes involved in ER TAG biosynthesis increased only in the stationary phase, which implied the potential of plastidial TAG biosynthesis. This report provides a novel insight into the growth-phase dependent lipogenic orchestration, and also uncovers the signature genes and plastidial TAG biosynthesis that might be extrapolated for improving lipogenic traits of algae.
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- 2020
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17. Dual expression of plastidial GPAT1 and LPAT1 regulates triacylglycerol production and the fatty acid profile in Phaeodactylum tricornutum
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Xiang Wang, Hong-Po Dong, Wei Wei, Srinivasan Balamurugan, Wei-Dong Yang, Jie-Sheng Liu, and Hong-Ye Li
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Diatoms ,GPAT1 ,LPAT1 ,Biofuel ,Triacylglycerol biosynthesis ,Prokaryotic TAG pathway ,Fuel ,TP315-360 ,Biotechnology ,TP248.13-248.65 - Abstract
Abstract Background Metabolic engineering has emerged as a potential strategy for improving microalgal lipid content through targeted changes to lipid metabolic networks. However, the intricate nature of lipogenesis has impeded metabolic engineering. Therefore, it is very important to identify the crucial metabolic nodes and develop strategies to exploit multiple genes for transgenesis. In an attempt to unravel the microalgal triacylglycerol (TAG) pathway, we overexpressed two key lipogenic genes, glycerol-3-phosphate acyltransferase (GPAT1) and lysophosphatidic acid acyltransferase (LPAT1), in oleaginous Phaeodactylum tricornutum and determined their roles in microalgal lipogenesis. Results Engineered P. tricornutum strains showed enhanced growth and photosynthetic efficiency compared with that of the wild-type during the growth phase of the cultivation period. However, both the cell types reached stationary phase on day 7. Overexpression of GPAT1 and LPAT1 increased the TAG content by 2.3-fold under nitrogen-replete conditions without compromising cell growth, and they also orchestrated the expression of other key genes involved in TAG synthesis. The transgenic expression of GPAT1 and LPAT1 influenced the expression of malic enzyme and glucose 6-phosphate dehydrogenase, which enhanced the levels of lipogenic NADPH in the transgenic lines. In addition, GPAT1 and LPAT1 preferred C16 over C18 at the sn-2 position of the glycerol backbone. Conclusion Overexpression of GPAT1 together with LPAT1 significantly enhanced lipid content without affecting growth and photosynthetic efficiency, and they orchestrated the expression of other key photosynthetic and lipogenic genes. The lipid profile for elevated fatty acid content (C16-CoA) demonstrated the involvement of the prokaryotic TAG pathway in marine diatoms. The results suggested that engineering dual metabolic nodes should be possible in microalgal lipid metabolism. This study also provides the first demonstration of the role of the prokaryotic TAG biosynthetic pathway in lipid overproduction and indicates that the fatty acid profile can be tailored to improve lipid production.
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- 2018
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18. High-efficiency promoter-driven coordinated regulation of multiple metabolic nodes elevates lipid accumulation in the model microalga Phaeodactylum tricornutum
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Li-Gong Zou, Jia-Wen Chen, Dan-Lin Zheng, Srinivasan Balamurugan, Da-Wei Li, Wei-Dong Yang, Jie-Sheng Liu, and Hong-Ye Li
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Microalga ,Promoter ,Triacylglycerol ,Metabolic nodes ,Microbiology ,QR1-502 - Abstract
Abstract Background Microalgal metabolic engineering holds great promise for the overproduction of a wide range of commercial bioproducts. It demands simultaneous manipulation of multiple metabolic nodes. However, high-efficiency promoters have been lacking. Results Here we report a strong constitutive promoter Pt211 in expressing multiple target genes in oleaginous microalga Phaeodactylum tricornutum. Pt211 was revealed to contain significant cis-acting elements. GUS reporter and principal genes glycerol-3-phosphate acyltransferase (GPAT) and diacylglycerol acyltransferase 2 (DGAT2) involved in triacylglycerol biosynthesis were tested under driven of Pt211 in P. tricornutum. GUS staining and qPCR analysis showed strong GUS expression. DGAT2 and GPAT linked with a designed 2A sequence exhibited higher transcript abundances than WT, while algal growth and photosynthesis were not impaired. Conclusion The total lipid content increased notably by 2.6-fold compared to WT and reached up to 57.5% (dry cell weight). Overall, our findings report a strong promoter and a strategy for coordinated manipulation of complex metabolic pathways.
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- 2018
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19. Inhibition of Diarrheal Shellfish Toxins Accumulation in the Mussel Perna viridis by Curcumin and Underlying Mechanisms
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Kuan-Kuan Yuan, Guo-Fang Duan, Qing-Yuan Liu, Hong-Ye Li, and Wei-Dong Yang
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DSTs ,Perna viridis ,AhR ,HR96 ,CYP3A4 ,CUR ,Medicine - Abstract
Diarrheal shellfish toxins (DSTs) are among the most widely distributed phytotoxins, and are associated with diarrheal shellfish poisoning (DSP) events in human beings all over the world. Therefore, it is urgent and necessary to identify an effective method for toxin removal in bivalves. In this paper, we found that curcumin (CUR), a phytopolylphenol pigment, can inhibit the accumulation of DSTs (okadaic acid-eq) in the digestive gland of Perna viridis after Prorocentrum lima exposure. qPCR results demonstrated that CUR inhibited the induction of DSTs on the aryl hydrocarbon receptor (AhR), hormone receptor 96 (HR96) and CYP3A4 mRNA, indicating that the CUR-induced reduction in DSTs may be correlated with the inhibition of transcriptional induction of AhR, HR96 and CYP3A4. The histological examination showed that P. lima cells caused severe damage to the digestive gland of P. viridis, and the addition of curcumin effectively alleviated the damage induced by P. lima. In conclusion, our findings provide a potential method for the effective removal of toxins from DST-contaminated shellfish.
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- 2021
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20. Occurrence of plastidial triacylglycerol synthesis and the potential regulatory role of AGPAT in the model diatom Phaeodactylum tricornutum
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Srinivasan Balamurugan, Xiang Wang, Hong-Lei Wang, Chun-Jing An, Hui Li, Da-Wei Li, Wei-Dong Yang, Jie-Sheng Liu, and Hong-Ye Li
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AGPAT ,Triacylglycerol ,Diatom ,Biofuels ,Fuel ,TP315-360 ,Biotechnology ,TP248.13-248.65 - Abstract
Abstract Background Microalgae have emerged as a potential feedstock for biofuels and bioactive components. However, lack of microalgal strains with promising triacylglycerol (TAG) content and desirable fatty acid composition have hindered its commercial feasibility. Attempts on lipid overproduction by metabolic engineering remain largely challenging in microalgae. Results In this study, a microalgal 1-acyl-sn-glycerol-3-phosphate acyltransferase designated AGPAT1 was identified in the model diatom Phaeodactylum tricornutum. AGPAT1 contained four conserved acyltransferase motifs I–IV. Subcellular localization prediction and thereafter immuno-electron microscopy revealed the localization of AGPAT1 to plastid membranes. AGPAT1 overexpression significantly altered the primary metabolism, with increased total lipid content but decreased content of total carbohydrates and soluble proteins. Intriguingly, AGPAT1 overexpression coordinated the expression of other key genes such as DGAT2 and GPAT involved in TAG synthesis, and consequently increased TAG content by 1.81-fold with a significant increase in polyunsaturated fatty acids, particularly EPA and DHA. Moreover, besides increased lipid droplets in the cytosol, ultrastructural observation showed a number of TAG-rich plastoglobuli formed in plastids. Conclusion The results suggested that AGPAT1 overexpression could elevate TAG biosynthesis and, moreover, revealed the occurrence of plastidial TAG synthesis in the diatom. Overall, our data provide a new insight into microalgal lipid metabolism and candidate target for metabolic engineering.
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- 2017
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21. An Update on the Evolution of Glucosyltransferase (Gtf) Genes in Streptococcus
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Rong-Rong Xu, Wei-Dong Yang, Ke-Xin Niu, Bin Wang, and Wen-Mei Wang
- Subjects
Streptococcus ,glucosyltransferase gene (Gtf) ,evolution ,duplication ,selection ,Microbiology ,QR1-502 - Abstract
In many caries-promoting Streptococcus species, glucosyltransferases (Gtfs) are recognized as key enzymes contributing to the modification of biofilm structures, disruption of homeostasis of healthy microbiota community and induction of caries development. It is therefore of great interest to investigate how Gtf genes have evolved in Streptococcus. In this study, we conducted a comprehensive survey of Gtf genes among 872 streptococci genomes of 37 species and identified Gtf genes from 364 genomes of 18 species. To clarify the relationships of these Gtf genes, 45 representative sequences were used for phylogenic analysis, which revealed two clear clades. Clade I included 12 Gtf genes from nine caries-promoting species of the Mutans and Downei groups, which produce enzymes known to synthesize sticky, water-insoluble glucans (WIG) that are critical for modifying biofilm structures. Clade II primarily contained Gtf genes responsible for synthesizing water-soluble glucans (WSG) from all 18 species, and this clade further diverged into three subclades (IIA, IIB, and IIC). An analysis of 16 pairs of duplicated Gtf genes revealed high divergence levels at the C-terminal repeat regions, with ratios of the non-synonymous substitution rate (dN) to synonymous substitution rate (dS) ranging from 0.60 to 1.03, indicating an overall relaxed constraint in this region. However, among the clade I Gtf genes, some individual repeat units possessed strong functional constraints by the same criterion. Structural variations in the repeat regions were also observed, with detection of deletions or recent duplications of individual repeat units. Overall, by establishing an updated phylogeny and further elucidating their evolutionary patterns, this work enabled us to gain a greater understanding of the origination and divergence of Gtf genes in Streptococcus.
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- 2018
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22. Cinnamaldehyde Could Reduce the Accumulation of Diarrhetic Shellfish Toxins in the Digestive Gland of the Mussel Perna viridis under Laboratory Conditions
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Guo-Fang Duan, Yang Liu, Li-Na Zhang, Hong-Ye Li, Jie-Sheng Liu, and Wei-Dong Yang
- Subjects
okadaic acid ,Perna viridis ,cinnamaldehyde ,CYP3A4 ,Biology (General) ,QH301-705.5 - Abstract
Diarrhetic shellfish toxins (DSTs), some of the most important phycotoxins, are distributed almost all over the world, posing a great threat to human health through the food chain. Therefore, it is of great significance to find effective methods to reduce toxin accumulation in shellfish. In this paper, we observed the effects of four phytochemicals including cinnamaldehyde (CA), quercetin, oridonin and allicin on the accumulation of DSTs in the digestive gland of Perna viridis after exposure to the DSTs-producing Prorocentrum lima. We found that, among the four phytochemicals, CA could effectively decrease the accumulation of DSTs (okadaic acid-eq) in the digestive gland of P. viridis. Further evidence demonstrated that CA could reduce the histological alterations of the digestive gland of a mussel caused by DSTs. RT-qPCR showed that CA could suppress the CYP3A4 induction by DSTs, suggesting that the DSTs’ decrease induced by CA might be related to the inhibition of CYP3A4 transcription induction. However, further studies on the underlying mechanism, optimal treatment time, ecological safety and cost should be addressed before cinnamaldehyde is used to decrease the accumulation of DSTs in field.
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- 2021
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23. Overview of Internet of vehicles for 5G
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Liang-min WANG, Xiao-long LIU, Chun-xiao LI, Jing YANG, and Wei-dong YANG
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5G ,internet of vehicles ,D2D ,low latency ,integration of multi-network ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
The functions and characteristics of current IOV(Internet of vehicles) Internet of vehicles were analyzed.Moreover,combined with 5G communication technology,the architecture of IOV for 5G was proposed to imple-ment access and integration of multi-network.Different from the IEEE 802.11p based architecture of VANET,de-vice-to-device (D2D) technology was introduced to achieve flexible terminals communication of IOV.In comparing with VANET based on IEEE 802.11p in terms of key technology parameters,the IOV for 5G possesses the better characteristics in terms of low latency and efficient spectrum utilization,and also need to face new interference management and security challenges.At the end,the application and development trends of IOV for 5G in the busi-ness and the specific environment were prospected.
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- 2016
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24. Biochemical and Genetic Engineering of Diatoms for Polyunsaturated Fatty Acid Biosynthesis
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Hong-Ye Li, Yang Lu, Jian-Wei Zheng, Wei-Dong Yang, and Jie-Sheng Liu
- Subjects
diatom ,fatty acids ,PUFA ,genetic engineering ,Biology (General) ,QH301-705.5 - Abstract
The role of diatoms as a source of bioactive compounds has been recently explored. Diatom cells store a high amount of fatty acids, especially certain polyunsaturated fatty acids (PUFAs). However, many aspects of diatom metabolism and the production of PUFAs remain unclear. This review describes a number of technical strategies, such as modulation of environmental factors (temperature, light, chemical composition of culture medium) and culture methods, to influence the content of PUFAs in diatoms. Genetic engineering, a newly emerging field, also plays an important role in controlling the synthesis of fatty acids in marine microalgae. Several key points in the biosynthetic pathway of PUFAs in diatoms as well as recent progresses are also a critical part and are summarized here.
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- 2014
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25. ABC Transporters in Prorocentrum lima and Their Expression Under Different Environmental Conditions Including Okadaic Acid Production
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Song Gu, Shao-Wen Xiao, Jian-Wei Zheng, Hong-Ye Li, Jie-Sheng Liu, and Wei-Dong Yang
- Subjects
ABC transporters ,Prorocentrum lima ,okadaic acid ,Biology (General) ,QH301-705.5 - Abstract
Prorocentrum lima is a typical benthic toxic dinoflagellate, which can produce phycotoxins such as okadaic acid (OA). In this study, we identified three ABC transporter genes (ABCB1, ABCC1 and ABCG2) and characterized their expression patterns, as well as OA production under different environmental conditions in P. lima. We found that the three ABC transporters all showed high identity with related ABC proteins from other species, and contained classical features of ABC transport proteins. Among them, ABCG2 was a half size transporter. The three ABC transporter genes displayed various expression profiles under different conditions. The high concentration of Cu2+ could up-regulate ABCB1, ABCC1 and ABCG2 transcripts in P. lima, suggesting the potential defensive role of ABC transporters against metal ions in surrounding waters. Cu2+, in some concentration, could induce OA production; meanwhile, tributyltin inhibited OA accumulation. The grazer Artemia salina could induce OA production, and P. lima displayed some toxicity to the grazer, indicating the possibility of OA as an anti-grazing chemical. Collectively, our results revealed intriguing data about OA production and the expression patterns of three ABC transporter genes. However, we could not find any significant correlation between OA production and expression pattern of the three ABC transporters in P. lima. Our results might provide new molecular insights on the defensive responses of P. lima to the surrounding environment.
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- 2019
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26. Improvement of Neutral Lipid and Polyunsaturated Fatty Acid Biosynthesis by Overexpressing a Type 2 Diacylglycerol Acyltransferase in Marine Diatom Phaeodactylum tricornutum
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Ying-Fang Niu, Meng-Han Zhang, Da-Wei Li, Wei-Dong Yang, Jie-Sheng Liu, Wei-Bin Bai, and Hong-Ye Li
- Subjects
diatom ,diacylglycerol acyltranferase ,PUFA ,neutral lipid ,Biology (General) ,QH301-705.5 - Abstract
Microalgae have been emerging as an important source for the production of bioactive compounds. Marine diatoms can store high amounts of lipid and grow quite quickly. However, the genetic and biochemical characteristics of fatty acid biosynthesis in diatoms remain unclear. Glycerophospholipids are integral as structural and functional components of cellular membranes, as well as precursors of various lipid mediators. In addition, diacylglycerol acyltransferase (DGAT) is a key enzyme that catalyzes the last step of triacylglyceride (TAG) biosynthesis. However, a comprehensive sequence-structure and functional analysis of DGAT in diatoms is lacking. In this study, an isoform of diacylglycerol acyltransferase type 2 of the marine diatom Phaeodactylum tricornutum was characterized. Surprisingly, DGAT2 overexpression in P. tricornutum stimulated more oil bodies, and the neutral lipid content increased by 35%. The fatty acid composition showed a significant increase in the proportion of polyunsaturated fatty acids; in particular, EPA was increased by 76.2%. Moreover, the growth rate of transgenic microalgae remained similar, thereby maintaining a high biomass. Our results suggest that increased DGAT2 expression could alter fatty acid profile in the diatom, and the results thus represent a valuable strategy for polyunsaturated fatty acid production by genetic manipulation.
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- 2013
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27. Attack-defense game model of node traces privacy preserving for vehicle ad hoc networks
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Wei-dong YANG, Yun-hua HE, and Li-min SUN
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vehicular ad-hoc networks ,trace ,privacy preserving ,game theory ,Telecommunication ,TK5101-6720 - Abstract
The vulnerability of published vehicle traces is a focus issue for vehicle ad hoc network. Aiming at the privacy of published traces with a game-theoretic model under the scene of the active attacks and defense actions were modeled, and the attack and defense games were analyzed. Also ability of an adversary and the goal that a defender wants to achieve by the information entropy were quantified. By the analysis of true traces, the Nash equilibrium point under the game of complete information and an optimal defense strategy providing the user with the best privacy level for each at-tack strategy were presented.
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- 2013
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28. Efficacy and Safety of OnabotulinumtoxinA in Patients with Neurogenic Detrusor Overactivity: A Systematic Review and Meta-Analysis of Randomized Controlled Trials.
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Tao Cheng, Wei-Bing Shuang, Dong-Dong Jia, Min Zhang, Xu-Nan Tong, Wei-Dong Yang, Xu-Ming Jia, and Shuo Li
- Subjects
Medicine ,Science - Abstract
Neurogenic detrusor overactivity (NDO) affects the quality of life (QoL) of millions of individuals worldwide. The purpose of this study was to assess the efficacy and safety of onabotulinumtoxinA in patients with NDO using a network meta-analytic approach, which can also quantify and compare the efficacy of onabotulinumtoxinA across different dosages.PubMed, EMBASE, and the Controlled Trials Register were searched to identify randomized controlled trials comparing onabotulinumtoxinA to a control for NDO in adult patients. The primary outcome was the mean number of urinary incontinence (UI) episodes per week. Urodynamic parameters included the maximum cystometric capacity (MCC) and the maximum detrusor pressure (MDP). The safety of onabotulinumtoxinA was determined by the incidence of various frequent adverse events (AEs). Two authors extracted data independently, and the statistical analyses were performed using RevMan 5.1.0 software.A total of 1,915 patients from six randomized controlled trials were included in this meta-analysis. The onabotulinumtoxinA-treated groups had a significantly decreased mean number of urinary incontinence episodes per week (at week 6) (onabotulinumtoxinA200U: MD: -10.72, 95% CI: -13.4 to -8.04, P
- Published
- 2016
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29. Transformation of diatom Phaeodactylum tricornutum by electroporation and establishment of inducible selection marker
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Ying-Fang Niu, Zhi-Kai Yang, Meng-Han Zhang, Cong-Cong Zhu, Wei-Dong Yang, Jie-Sheng Liu, and Hong-Ye Li
- Subjects
diatom ,electroporation ,nitrate reductase promoter ,inducible expression ,Biology (General) ,QH301-705.5 - Abstract
Diatoms are important primary producers in the marine ecosystem. Currently it is difficult to genetically transform diatoms due to the technical limitations of existing methods. The promoter/terminator of the nitrate reductase gene of the model diatom Phaeodactylum tricornutum was cloned and used to drive chloramphenicol acetyltransferase (CAT) reporter gene expression. The construct was transferred by electroporation into P. tricornutum grown in medium lacking silicon. CAT expression was induced in transformed diatoms in the presence of nitrate, enabling growth in selective medium, and was repressed when ammonium was the only nitrogen source. Expression of CAT transcript and protein were demonstrated by RT-PCR and Western blot analysis, respectively. Our study is the first to report a successful genetic transformation of diatom by electroporation in an economical and efficient manner and provides a tightly regulated inducible gene expression system for diatom.
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- 2012
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30. Analysis of the effects of apical backfilling depth on apical sealing of different root canal filling qualities and morphologies
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Qian-nan Zhang, Yu Zhang, Chen-chen Zhang, Yue Yuan, Qi Wang, and Wei-dong Yang
- Subjects
General Dentistry - Published
- 2023
31. An approach to mitigating soil CO2 emission by biochemically inhibiting cellulolytic microbial populations through mediation via the medicinal herb Isatis indigotica
- Author
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Wu, Hong-Sheng, Chen, Su-Yun, Li, Ji, Liu, Dong-Yang, Zhou, Ji, Xu, Ya, Shang, Xiao-Xia, Wei, Dong-yang, Yu, Lu-ji, Fang, Xiao-hang, Li, Shun-yi, and Wang, Ke-ke
- Published
- 2017
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32. Supplementation with rac-GR24 Facilitates the Accumulation of Biomass and Astaxanthin in Two Successive Stages of Haematococcus pluvialis Cultivation
- Author
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Xiang Wang, Jin-Hua Mou, Zi-Hao Qin, Ting-Bin Hao, Lan Zheng, Joseph Buhagiar, Yu-Hong Liu, Srinivasan Balamurugan, Yuhe He, Carol Sze Ki Lin, Wei-Dong Yang, and Hong-Ye Li
- Subjects
General Chemistry ,General Agricultural and Biological Sciences - Published
- 2022
33. Polyphenol regulates metabolic and physiological properties of microalgae to accumulate biocompounds
- Author
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Li-Gong Zou, Dan-Lin Zheng, Yi-Tong Yao, Fu-Fang Wen, Xiang Wang, Da-Wei Li, Yu-Feng Yang, Wei-Dong Yang, Srinivasan Balamurugan, Hang Fai Kwok, and Hong-Ye Y. Li
- Abstract
Background The development of affordable strategy to concurrently enhance microalgal biomass and biocomponents is warranted for commercial applications. Here, we investigated the efficacy of a cheap and natural polyphenol, tannic acid, on regulating metabolic and physiological properties of oleaginous microalga Phaeodactylum tricornutum to overproduce biocompounds. Result Tannic acid provision regulated the key metabolic pathways to enhance algal biomass and lipids in a dose-dependent manner without direct impact on photosynthesis. It reduced oxidative stress and reallocated carbon precursors towards lipogenesis. Lipidomic analyses showed that tannic acid provision unprecedentedly regulated the key lipogenic pathways, enhanced glyco- and neutral-lipids by 1.29- and 1.54-fold, respectively, whereas phospholipids were significantly altered. Tannic acid facilitated polyunsaturated fatty acid overproduction with a specific increment of EPA and DHA by 1.18- and 2.25-fold, respectively. Transcriptomic analysis demonstrated that tannic acid upregulated the expression of multiple genes involved in lipogenesis. Conclusion Here, we dissected the potential of tannic acid, a natural and cheaper polyphenol, on concurrently enhancing lipids and PUFAs without impairing physiological properties in P. tricornutum. The findings provide novel insights into the mechanistic roles of polyphenol as a potential chemical modulator.
- Published
- 2023
34. Cytochrome P450-mediated co-metabolism of fluoroquinolones by Haematococcus lacustris for simultaneously promoting astaxanthin and lipid accumulation
- Author
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Xiang Wang, Zhong-Hong Zhang, Kuan-Kuan Yuan, Hui-Ying Xu, Guo-Hui He, Libin Yang, Joseph Buhagiar, Wei-Dong Yang, Yalei Zhang, Carol Sze Ki Lin, and Hong-Ye Li
- Subjects
Algae products ,General Chemical Engineering ,Cytochrome P-450 ,Environmental Chemistry ,General Chemistry ,Algal enzymes ,Microalgae -- Biotechnology ,Industrial and Manufacturing Engineering ,Fluoroquinolones - Abstract
Microalgae-based antibiotic removal treatment has attracted attention because of its low carbon and sustainable advantages. The microalgal co-metabolism system with a suitable carbon source leads to enhanced performance of pollutant removal. However, currently, limited knowledge is available for the removal of fluoroquinolone using a microalgae-mediated co-metabolism system. In this study, we first investigated that the biotic processes by alga Haematococcus lacustris in the co-metabolism system by adding glycerol would be the main contributors responsible for the removal of 10 mg/L ofloxacin (OFL) with the efficiency of 79.73% and the removal of 10 mg/ L enrofloxacin (ENR) with the efficiency of 54.10%, respectively. Furthermore, we found that pyruvate from glycerol was converted into substrates and precursors, thereby resulting in the significant accumulations of microalgal astaxanthin and lipid. The astaxanthin content of H. lacustris was achieved at 4.81% and 4.69% treated with OFL and ENR in the presence of glycerol, with 16.04% and 14.55% of lipid content, respectively. The proposed metabolites and pathways were identified to plausibly explain the biodegradation of fluoroquinolone by H. lacustris. The molecular analyses demonstrated that cytochrome P450 (CYP450) enzymes are responsible for the biodegradation of fluoroquinolone, and it was further verified that fluoroquinolones might insert into CYP450 to finally form an efficient and tight binding conformation by molecular dynamic simulation. These findings provide a microalgae-based route for feasible and sustainable biodegradation of antibiotics using a co-metabolism strategy comprising glycerol as a carbon source, with the synergistic accumulation of valuable products., peer-reviewed
- Published
- 2023
35. A multiple SVR modeling of hot rolling process combined with kernel clustering and grey relational grade.
- Author
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Ling Wang, Dong-Mel Fu, and Wei-dong Yang
- Published
- 2012
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36. Hyperaccumulation of fucoxanthin by enhancing methylerythritol phosphate pathway in Phaeodactylum tricornutum
- Author
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Yang Lu, Zhong-Hong Zhang, Si-Fen Liu, Srinivasan Balamurugan, Xiang Wang, Hong-Ye Li, Wei-Dong Yang, and Ting-Bin Hao
- Subjects
Diatoms ,chemistry.chemical_classification ,biology ,General Medicine ,Xanthophylls ,biology.organism_classification ,Photosynthesis ,Carotenoids ,Applied Microbiology and Biotechnology ,Phosphates ,Metabolic engineering ,chemistry.chemical_compound ,Diatom ,chemistry ,Biosynthesis ,Biochemistry ,Humans ,Fucoxanthin ,Phaeodactylum tricornutum ,Gene ,Carotenoid ,Biotechnology - Abstract
The established human health benefits of carotenoids along with the contemporary consumption of natural carotenoids bring the necessity to sustainable production of carotenoids. Among, marine diatoms have emerged as the potential biological resources for carotenoid production; however, their relatively lower yield in native strains provides the impetus to genetically improve the diatoms to cope with the burgeoning demand. In this study, we genetically improved the diatom Phaeodactylum tricornutum by overexpressing key carotenogenic genes involved in methylerythritol phosphate (MEP) pathway. The genes with lower relative transcript level under optimum conditions such as CMK and CMS were selected and overexpressed in P. tricornutum individually. Both CMK and CMS overexpressing lines exhibited elevated growth and photosynthesis. The expression of key carotenogenic genes such as PSY, PDS, ZDS, CRT, and LCYB was significantly upregulated. Furthermore, total carotenoid content was significantly increased; particularly, fucoxanthin content was increased by 1.83- and 1.82-fold in engineered lines CMK and CMS, respectively. Together, the results identify the potential metabolic targets and also uncover the crucial role of MEP pathway in redirecting metabolic precursors towards carotenogenesis. KEY POINTS: • Low abundant genes CMS and CMK of MEP pathway were overexpressed in the diatom • Total carotenoid content was increased, particularly fucoxanthin • Critical metabolic nodes were uncovered to accelerate fucoxanthin biosynthesis.
- Published
- 2021
37. An Trace Based Vehicular Mobility Model for Simulation of Vehicular Delay Tolerant Networks.
- Author
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Wei-dong Yang, Ji-Zhao Liu, and Xinyun Zhou
- Published
- 2010
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38. Systematic exploration of transcriptional responses of interspecies interaction between Karenia mikimotoi and Prorocentrum shikokuense
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Jian-Wei Zheng, Guo-Hui He, Rui-Xia Xu, Xiang Wang, Hong-Ye Li, and Wei-Dong Yang
- Subjects
Plant Science ,Aquatic Science - Published
- 2023
39. Research on Knowledge Management Framework Based on Peer-to-peer Computing.
- Author
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Wei-dong Yang and Ming Zhao
- Published
- 2007
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40. Responses of ABCB and ABCC transporters to the toxic dinoflagellate Prorocentrum lima in the mussel Perna viridis
- Author
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Jin-Jin Lv, Kuan-Kuan Yuan, Guan-Xiu Lu, Hong-Ye Li, Hang Fai Kwok, and Wei-dong Yang
- Subjects
Health, Toxicology and Mutagenesis ,Aquatic Science - Abstract
Bivalve mollusks can accumulate diarrheic shellfish poisoning (DSP) toxins through filter-feeding, but they exhibit some resistance to the toxins. Previous studies have suggested that the ABC transporters may have an important role in the resistance to DSP toxins, but comprehensive studies are lacking. In this study, we comprehensively analyzed the distribution of ABC transporters in the mussel Perna viridis, and observed responses of ABCB and ABCC transporters to the DSP toxins-producing dinoflagellate Prorocentrum lima. Total 39 members of ABC transporters were identified in P. viridis, including 3 full PvABCBs, 3 half PvABCBs, and 7 PvABCCs transporters. We found that PvABCBs and PvABCCs subfamilies were expressed in hemocytes, gills and digestive gland with some difference, especially in hemocytes. After exposure to P. lima, PvABCBs and PvABCCs displayed different expression changes in different tissues. The short-term (3 h) exposure to P. lima induced the transcription of PvABCB1_like1, PvABCB6, PvABCC1, PvABCC1_like and PvABCC1/3, and the longer-term (96 h) exposure increased the transcription of PvABCB1, PvABCB1_like, PvABCB10, PvABCC1 and PvABCC1_like1 in gills and PvABCC10 in digestive gland. These results suggest that different types of PvABCBs and PvABCCs in P. viridis may contribute to the detoxification of DSP toxins in different tissues at different time after exposure to DSP toxins. Our finding provides new evidence for further understanding the role of ABC transporters in the tolerance of mussel to DSP toxins.
- Published
- 2022
41. miR-19a/b promote EMT and proliferation in glioma cells via SEPT7-AKT-NF-κB pathway
- Author
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Weihan Wang, Yubing Hao, Guangxiu Wang, Zhifan Jia, Wei-dong Yang, Wei Wei, and Anling Zhang
- Subjects
0301 basic medicine ,Cancer Research ,miR-19a/b ,Vimentin ,SEPT7-AKT-NF-κB pathway ,lcsh:RC254-282 ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Glioma ,glioma ,medicine ,Pharmacology (medical) ,Protein kinase B ,biology ,Cell growth ,Chemistry ,NF-κB ,Transfection ,medicine.disease ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,030104 developmental biology ,Oncology ,Apoptosis ,030220 oncology & carcinogenesis ,Cancer research ,biology.protein ,Molecular Medicine ,Phosphorylation ,Original Article - Abstract
miR-19a/b belong to the miR-17-92 family. We have demonstrated previously that miR-19a/b are overexpressed in glioma and glioma cell lines. However, the role of miR-19a/b in glioma remains unclear. In the present study, we aim to identify the biological function and molecular mechanism of miR-19a/b in glioma cell proliferation and epithelial-mesenchymal transition (EMT). Knocking down miR-19a/b in LN308 glioblastoma (GBM) cells with higher expression of miR-19a/b inhibits cell proliferation and invasion, induces apoptosis, and suppresses EMT by downregulating the expression of Akt, phosphorylated p-Akt, nuclear factor κB (NF-κB), Snail, N-cadherin, and Vimentin and upregulating E-cadherin in vitro and in vivo. Enhanced proliferation and EMT are also observed when miR-19a/b are transfected into SNB19 GBM cells, with lowered expression of miR-19a/b. miR-19a is more effective than miR-19b in the regulation of biological behavior of glioma cells. miR-19a/b modulate molecular events for the promotion of EMT via the Akt-NF-κB pathway. SEPT7 has been confirmed as the target gene of miR-19a/b. The effect of miR-19a/b on proliferation and EMT of glioma cells and the Akt-NF-κB pathway could be reversed by transfection with SEPT7. Our study strongly suggests that miR-19a/b play a significant role in glioma progression and EMT through regulating target gene-SEPT7 and the SEPT7-Akt-NF-κB pathway., Graphical Abstract, miR-19a/b promote proliferation, invasion, and EMT of glioma cells via upregulating the AKT-NF-κB pathway by targeting SEPT7.
- Published
- 2021
42. Microcystin-LR exposure interfered maintenance of colonic microenvironmental homeostasis in rat
- Author
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Yang Liu, Chun-Li Qi, Da-Wei Li, Hong-Ye Li, Rui-Man Li, and Wei-Dong Yang
- Subjects
General Medicine ,Toxicology ,Food Science - Published
- 2023
43. Supplementation with
- Author
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Xiang, Wang, Jin-Hua, Mou, Zi-Hao, Qin, Ting-Bin, Hao, Lan, Zheng, Joseph, Buhagiar, Yu-Hong, Liu, Srinivasan, Balamurugan, Yuhe, He, Carol Sze Ki, Lin, Wei-Dong, Yang, and Hong-Ye, Li
- Subjects
Chlorophyceae ,Dietary Supplements ,Biomass ,Xanthophylls - Abstract
The unicellular freshwater green alga
- Published
- 2022
44. TAG pathway engineering via GPAT2 concurrently potentiates abiotic stress tolerance and oleaginicity in Phaeodactylum tricornutum
- Author
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Wei-Dong Yang, Srinivasan Balamurugan, Ruo-Yu Li, Si-Fen Liu, Hong-Ye Li, Jie-Sheng Liu, Xiang Wang, and Carol Sze Ki Lin
- Subjects
Gene isoform ,Abiotic stress tolerance ,lcsh:Biotechnology ,Management, Monitoring, Policy and Law ,Photosynthesis ,Applied Microbiology and Biotechnology ,Lipid hyperaccumulation ,lcsh:Fuel ,lcsh:TP315-360 ,lcsh:TP248.13-248.65 ,Lipid remodeling ,Phaeodactylum tricornutum ,Overproduction ,chemistry.chemical_classification ,Strain (chemistry) ,biology ,Renewable Energy, Sustainability and the Environment ,Abiotic stress ,Research ,Glycerol-3-phosphate acyltransferase ,Fatty acid ,Diatom ,biology.organism_classification ,General Energy ,chemistry ,Biochemistry ,Acyltransferase ,Biotechnology - Abstract
Background Despite the great potential of marine diatoms in biofuel sector, commercially viable biofuel production from native diatom strain is impractical. Targeted engineering of TAG pathway represents a promising approach; however, recruitment of potential candidate has been regarded as critical. Here, we identified a glycerol-3-phosphate acyltransferase 2 (GPAT2) isoform and overexpressed in Phaeodactylum tricornutum. Results GPAT2 overexpression did not impair growth and photosynthesis. GPAT2 overexpression reduced carbohydrates and protein content, however, lipid content were significantly increased. Specifically, TAG content was notably increased by 2.9-fold than phospho- and glyco-lipids. GPAT2 overexpression elicited the push-and-pull strategy by increasing the abundance of substrates for the subsequent metabolic enzymes, thereby increased the expression of LPAAT and DGAT. Besides, GPAT2-mediated lipid overproduction coordinated the expression of NADPH biosynthetic genes. GPAT2 altered the fatty acid profile in TAGs with C16:0 as the predominant fatty acid moieties. We further investigated the impact of GPAT2 on conferring abiotic stress, which exhibited enhanced tolerance to hyposaline (70%) and chilling (10 ºC) conditions via altered fatty acid saturation level. Conclusions Collectively, our results exemplified the critical role of GPAT2 in hyperaccumulating TAGs with altered fatty acid profile, which in turn uphold resistance to abiotic stress conditions.
- Published
- 2020
45. Genetic diversity of Prorocentrum donghaiense population during bloom in the East China Sea revealed by microsatellite
- Author
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Shao-wen Xiao, Srinivasan Balamurugan, Hong-jia Huang, Hong-Ye Li, Wei-Dong Yang, Cheng Zou, Chu-qiao Gan, and Jie-Sheng Liu
- Subjects
0106 biological sciences ,geography ,education.field_of_study ,Genetic diversity ,geography.geographical_feature_category ,ved/biology ,Ecology ,010604 marine biology & hydrobiology ,Population ,ved/biology.organism_classification_rank.species ,Dinoflagellate ,Prorocentrum donghaiense ,Estuary ,Plant Science ,Aquatic Science ,Biology ,biology.organism_classification ,01 natural sciences ,Genetic structure ,Microsatellite ,Bloom ,education ,010606 plant biology & botany - Abstract
Blooms of the dinoflagellate Prorocentrum donghaiense occur frequently along the East China coast and Yangtze River estuary and pose a potential threat to coastal ecosystems. However, information on the genetic diversity of P. donghaiense populations in the East China Sea remains limited despite its ecological significance. Here we developed nine microsatellite markers based on transcriptome sequencing and analyzed genetic diversity and structure of P. donghaiense population in the East China Sea. We found that the Nei’s genetic diversity index of P. donghaiense population varied from 0.019 to 0.551 with an average of 0.227, whereas Shannon’s index ranged from 0.055 to 0.968 with an average of 0.431. Moreover, four genetically distinct subpopulations were identified based on STRUCTURE analysis. These results clearly indicated that P. donghaiense population during the blooms had high genetic diversity in the East China Sea, which might form the basis for variability in phenotype of P. donghaiense population and empower its capability to adapt to changing environment. Collectively our findings uncovered the genetic distinctiveness in P. donghaiense populations between 2014 and 2016 and provide valuable insights into the genetic structure and diversity of P. donghaiense blooms.
- Published
- 2020
46. Association analysis between the tag single nucleotide polymorphisms of DENND1A and the risk of polycystic ovary syndrome in Chinese Han women
- Author
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Xiang Zou, Wen-jun Wang, Wei-dong Yang, Ya-nan Zhu, Long Yi, Yong Wang, Shanmei Shen, Yi-ting Zhang, Yunxia Cao, Qin Liu, and Qian Gao
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0301 basic medicine ,Adult ,medicine.medical_specialty ,Linkage disequilibrium ,China ,Death Domain Receptor Signaling Adaptor Proteins ,lcsh:Internal medicine ,Genotype ,endocrine system diseases ,lcsh:QH426-470 ,Population ,Single-nucleotide polymorphism ,Biology ,Polymorphism, Single Nucleotide ,DENND1A ,03 medical and health sciences ,0302 clinical medicine ,Risk Factors ,Internal medicine ,Genetics ,medicine ,Guanine Nucleotide Exchange Factors ,Humans ,Genetic Predisposition to Disease ,education ,lcsh:RC31-1245 ,Allele frequency ,Genetics (clinical) ,Alleles ,Genetic Association Studies ,Polycystic ovary syndrome ,Genetic association ,education.field_of_study ,030219 obstetrics & reproductive medicine ,Genetic polymorphism ,Haplotype ,Polycystic ovary ,lcsh:Genetics ,030104 developmental biology ,Endocrinology ,Haplotypes ,Female ,Research Article - Abstract
Background The DENND1A gene is one of the most important sites associated with polycystic ovary syndrome (PCOS). We attempted to analyze the correlation between five single nucleotide polymorphisms (SNPs) in the DENND1A gene and the development of PCOS. Methods A total of 346 PCOS patients and 225 normal ovulatory women were involved in the case-control study. Clinical variables and hormones were recorded. According to the Hap Map database, five tagging SNPs (rs2479106, rs2768819, rs2670139, rs2536951 and rs2479102) in the DENND1A gene were identified. The TaqMan probe and the PCR–RFLP (restriction fragment length polymorphism) methods were used for revealing these genotypes. TaqMan Genotype Software was used to analyze the alleles of the five SNPs. Results Linkage disequilibrium and the gene frequency analysis demonstrated that the CCGGG haplotype might increase the risk of PCOS (P = 0.038, OR = 1.89, 95% CI = 1.027–3.481). Significant differences were found in genotypic and allelic distributions at the rs2536951 and rs2479102 loci between PCOS women and controls (P P = 0.013 and P = 0.007, respectively), and for the rs2468819 locus, these two values were significantly different among the PCOS patients with AA, AG and GG genotypes (P = 0.013 and 0.002, respectively). Conclusions The tagging SNPs rs2479106 and rs2468819 in the DENND1A gene are associated with PCOS in the Chinese population, whereas rs2670139, rs2536951 and rs2479102 are not correlated with PCOS in the same population.
- Published
- 2020
47. Morphological changes of the root apex in anterior teeth with periapical periodontitis: an in-vivo study
- Author
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Shan-hui Wen, Ming-zhu Zha, Chen-chen Zhang, Wei-dong Yang, Ya-jing Liu, Qi Wang, and Qian-nan Zhang
- Subjects
Periapical periodontitis ,business.industry ,Research ,Cone-beam computed tomography ,Dentistry ,RK1-715 ,medicine.disease ,Anterior teeth ,Root apex ,Root Canal Therapy ,stomatognathic system ,Tooth Apex ,In vivo ,medicine ,cardiovascular system ,Humans ,3D reconstruction ,business ,Root apex morphology ,General Dentistry ,Periapical Periodontitis - Abstract
Introduction The aim was to analyze the morphological changes of root apex in anterior teeth with periapical periodontitis. Methods 32 untreated anterior teeth with periapical periodontitis were enrolled, compared with the healthy contralateral teeth. Two-dimensional measurement of Cone-beam computed tomography was used to determine the location and measure diameter of the apical constriction according to Schell’s methods. An open-source software (3D Slicer) was used to reconstruct the teeth. The apical constriction form was analysis according to Schell’s topography. The distances of apical constriction to apical foramen and anatomical apex were measured respectively. Results The difference value between buccolingual and mesiodistal diameter was (0.06 ± 0.09) mm and (0.04 ± 0.04) mm in periapical periodontitis and controls (p Conclusions The anterior teeth with periapical periodontitis had shorter distances of apical constriction to anatomical apex and apical foramen, bigger disparities between the diameters of buccolingual and mesiodistal, and higher proportion of flaring apical constriction.
- Published
- 2022
48. Catechol Alters the Biochemical Composition with Specific Increment in Polyunsaturated Fatty Acids in Crypthecodinium Cohnii
- Author
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Li-Gong Zou, Yi-Tong Yao, Fu-Fang Wen, Xiao Zhang, Bo-Tao Liu, Da-Wei Li, Yu-Feng Yang, Wei-Dong Yang, Srinivasan Balamurugan, and Hongye Li
- Published
- 2022
49. A Combined Light Regime and Carbon Supply Regulation Strategy for Microalgae-Based Sugar Industry Wastewater Treatment and Low-Carbon Biofuel Production to Realise a Circular Economy
- Author
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Xiang Wang, Zi-Hao Qin, Ting-Bin Hao, Guang-Bin Ye, Jin-Hua Mou, Srinivasan Balamurugan, Xiao-Yun Bin, Joseph Buhagiar, Hong-Mei Wang, Yuhe He, Carol Sze Ki Lin, Wei-Dong Yang, and Hongye Li
- Subjects
History ,Polymers and Plastics ,Business and International Management ,Industrial and Manufacturing Engineering - Published
- 2022
50. Multi-omics analysis reveals metabolism of okadaic acid in gut lumen of rat
- Author
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Yang Liu, Yang Lu, Yu-Hu Jiao, Da-Wei Li, Hong-Ye Li, and Wei-Dong Yang
- Subjects
Bacteria ,Health, Toxicology and Mutagenesis ,Okadaic Acid ,Animals ,High-Throughput Nucleotide Sequencing ,Metabolomics ,Female ,Marine Toxins ,General Medicine ,Rats, Wistar ,Toxicology ,Gastrointestinal Microbiome ,Rats - Abstract
Okadaic acid (OA) is an important marine lipophilic phycotoxin with various pathological properties, responsible for diarrheal shellfish poisoning events in human beings over the world. However, to date no mechanism can well explain the toxicity and symptom of OA, even diarrhea. Here, to reveal the toxic mechanism of OA to mammals, we analyzed the metabolism of OA in rat and the effects of OA exposure on the composition and function of gut bacteria using a multi-omics strategy and rRNA high-throughput technology. We found that OA exerted great effects on gut bacteria, mainly featured in heavy fluctuation of dominant genera and significant changes in the mapped bacterial function genes, including not only virulence genes of pathogenic bacteria, but also bacterial metabolism genes. In the feces of the OA-exposed group, we detected dinophysistoxin-2 (DTX-2), lespedezaflavanone F and tolytoxin, suggesting that OA could be transformed into other metabolites like DTX-2. Other metabolic biomarkers such as N-Acetyl-a-neuraminic acid, N,N-dihydroxy-L-tyrosine, nalbuphine, and coproporphyrin I and III were also highly correlated with OA content, which made the toxicity of OA more complicated and confusing. Spearman correlation test demonstrated that Bacteroides and Romboutsia were the genera most related to OA transformation, suggesting that Bacteroides and Romboutsia might play a key role in the complicated and confusing toxicity of OA. In this study, we found for the first time that OA may be converted into other metabolites in gut, especially DTX-2. This finding could not only help to reveal the complex toxicity of OA, but also have important significance for clarifying the transportation, metabolism, and environmental fate of OA in the food chain.
- Published
- 2021
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