66 results on '"Wei XT"'
Search Results
2. The influence of open disc repositioning surgery on the internal derangement of the contralateral temporomandibular joint: a prospective study of 96 patients.
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Cui ZK, Chen Y, Guo YJ, Wei XT, Yan W, and Qi MC
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- Humans, Female, Male, Prospective Studies, Adult, Treatment Outcome, Joint Dislocations surgery, Joint Dislocations diagnostic imaging, Middle Aged, Pain Measurement, Adolescent, Temporomandibular Joint Disorders surgery, Temporomandibular Joint Disorders diagnostic imaging, Magnetic Resonance Imaging, Temporomandibular Joint Disc surgery, Temporomandibular Joint Disc diagnostic imaging
- Abstract
Objective: To assess the influence of unilateral open disc repositioning surgery (ODRS) of the temporomandibular joint (TMJ) on the internal derangement (ID) of the contralateral joint., Methods: Patients with bilateral ID of TMJ who underwent unilateral ODRS were enrolled and followed-up for one year. They were divided into two groups based on the contralateral disease: the anterior disc displacement with reduction (ADDWR) and without reduction (ADDWoR). Postoperative evaluation included clinical and MRI evaluation. Indices measured were unilateral intermaxillary distance (UID), visual analogue scale (VAS), disc length (DL), condylar height (CH), and disc-condyle angle (DCA). Paired t tests were used to compare the clinical and MRI indices between different time points., Results: Ninety-six patients were enrolled, including 47 in the ADDWR group and 49 in the ADDWoR group. One-year post-surgery, ODRS led to significant increases in MMO, DL, and CH, and decrease in VAS and DCA on the operated side (P < 0.05). In ADDWR group, UID, DL, and CH increased significantly, and VAS decreased (P < 0.05), with no significant change in DCA (P > 0.05). In ADDWoR group, clinical and MRI variables worsened slightly, except for UID, which remained unchanged (P > 0.05)., Conclusions: ODRS is a promising method for correcting TMJ ID and may improve condition of ADDWR and decrease progress of ADDWoR at the contralateral joint. Preoperative bilateral TMJ evaluation is essential for better outcomes., Clinical Relevance: ODRS can effectively treat TMJ ID and produce adaptive changes in the contralateral ID, for which continuous monitoring of the contralateral joint is essential., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2024
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3. [Research progress on mechanism of traditional Chinese medicine intervention in angiogenesis in prevention and treatment of nontraumatic avascular necrosis of femoral head].
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Li HM, Xing T, Li SH, Wei GJ, Wang ZY, Bo SJ, Li YG, and Wei XT
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- Humans, Medicine, Chinese Traditional, Animals, Femur Head blood supply, Neovascularization, Pathologic drug therapy, Neovascularization, Physiologic drug effects, Angiogenesis, Femur Head Necrosis prevention & control, Femur Head Necrosis drug therapy, Drugs, Chinese Herbal therapeutic use, Drugs, Chinese Herbal administration & dosage
- Abstract
Nontraumatic avascular necrosis of the femoral head(NANFH) is a common and refractory femoral head disease that causes bone death due to interruption of blood supply. Early clinical symptoms are atypical, such as hip pain and limited joint function. In the late stage, severe pain, shortening of the affected limb, claudication, and other serious symptoms are common, which se-riously affects the quality of life of patients. Therefore, it is of great significance to actively improve the clinical symptoms of NANFH to enhance the quality of life of patients. The pathogenesis of NANFH is complex, such as traumatic vascular circulatory disorders, the use of hormones or other drugs, alcoholism, and diabetes mellitus. These factors directly or indirectly lead to femoral head vascular damage, thrombosis, and coagulation system disorders, which reduce the blood supply to the acetabulum and femoral head, thus causing ischaemic death of the femoral head or even femoral head collapse. NANFH is mainly categorized as "bone impotence" and "bone paralysis" in traditional Chinese medicine(TCM). The treatment of NANFH with TCM has the characteristics and advantages of a long history, stable and reliable therapeutic effect, fewer adverse reactions, good patient tolerance, and high acceptance. Previous studies have shown that the promotion of angiogenesis is a key initiative in the prevention and treatment of NANFH, and TCM can promote fe-moral head angiogenesis by interfering with the expression of angiogenesis-related factors, which in turn can help to restore the blood supply of the femoral head and thus improve clinical symptoms of NANFH and prevent and treat NANFH. This article described the roles of blood supply interruption and angiogenesis in NANFH and the accumulated knowledge and experience of TCM in NANFH and summarized the role of angiogenesis-related factors in NANFH and the research progress on TCM intervention, so as to provide an idea for the subsequent research and a new basis for the clinical application of TCM in the treatment of NANFH.
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- 2024
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4. Tricarboxylic acid cycle metabolites: new players in macrophage.
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Yang Y, Cui BB, Li J, Shan JJ, Xu J, Zhang CY, Wei XT, Zhu RR, and Wang JY
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- Citric Acid Cycle physiology, Macrophages metabolism
- Abstract
Metabolic remodeling is a key feature of macrophage activation and polarization. Recent studies have demonstrated the role of tricarboxylic acid (TCA) cycle metabolites in the innate immune system. In the current review, we summarize recent advances in the metabolic reprogramming of the TCA cycle during macrophage activation and polarization and address the effects of these metabolites in modulating macrophage function. Deciphering the crosstalk between the TCA cycle and the immune response might provide novel potential targets for the intervention of immune reactions and favor the development of new strategies for the treatment of infection, inflammation, and cancer., (© 2024. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)
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- 2024
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5. [Role of NLRP3 inflammasome in prevention and treatment of cognitive impairment-related diseases and traditional Chinese medicine intervention: a review].
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Wang CH, Wei XT, Zhao YQ, Wang DH, Xue JJ, Song ZQ, Tang F, Liu RX, and Wang CA
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- Humans, Inflammasomes metabolism, NLR Family, Pyrin Domain-Containing 3 Protein genetics, NLR Family, Pyrin Domain-Containing 3 Protein metabolism, Amyloid beta-Peptides metabolism, Medicine, Chinese Traditional, Quality of Life, Alzheimer Disease drug therapy, Alzheimer Disease prevention & control, Cognitive Dysfunction drug therapy, Cognitive Dysfunction prevention & control
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Alzheimer's disease(AD), vascular dementia(VD), and traumatic brain injury(TBI) are more common cognitive impairment diseases characterized by high disability and mortality rates, imposing a heavy burden on individuals and their families. Although AD, VD, and TBI have different specific mechanisms, their pathogenesis is closely related to the nucleotide-binding oligome-rization domain-like receptor protein 3(NLRP3). The NLRP3 inflammasome is involved in neuroinflammatory responses, mediating microglial polarization, regulating the reduction of amyloid β-protein(Aβ) deposition, neurofibrillary tangles(NFTs) formation, autophagy regulation, and maintaining brain homeostasis, and synaptic stability, thereby contributing to the development of AD, VD, and TBI. Previous studies have shown that traditional Chinese medicine(TCM) can alleviate neuroinflammation, promote microglial polarization towards the M2 phenotype, reduce Aβ deposition and NFTs formation, regulate autophagy, and maintain brain homeostasis by intervening in NLRP3 inflammasome, hence exerting a role in preventing and treating cognitive impairment-related diseases, reducing psychological and economic pressure on patients, and improving their quality of life. Therefore, this article elucidated the role of NLRP3 inflammasome in AD, VS, and TBI, and provided a detailed summary of the latest research results on TCM intervention in NLRP3 inflammasome for the prevention and treatment of these diseases, aiming to inherit the essence of TCM and provide references and foundations for clinical prevention and treatment of cognitive impairment-related diseases with TCM. Meanwhile, this also offers insights and directions for further research in TCM for the prevention and treatment of cognitive impairment-related diseases.
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- 2024
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6. Animal pharmacokinetics/pharmacodynamics (PK/PD) infection models for clinical development of antibacterial drugs: lessons from selected cases.
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Moore JN, Poon L, Pahwa S, Bensman T, Wei XT, Danielsen ZY, and Jang S
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- Animals, Humans, Anti-Bacterial Agents pharmacokinetics, Anti-Bacterial Agents pharmacology, Disease Models, Animal, Drug Development
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In the wake of emerging antimicrobial resistance, antibacterial drug development has become more critical. At the same time, development of antibacterial drugs targeting specific pathogens or resistance phenotypes that may have low prevalence presents challenges because it is difficult to conduct large, randomized controlled trials for such drugs. Animal models have increasingly supported clinical development of antibacterials; however, more work is needed to optimize the design and application of these animal models to ensure clear and actionable translation to further human investigation. This review discusses recent case studies of animal infection models used to support antibacterial drug development in order to illuminate considerations for future development of novel antibacterial drugs., (Published by Oxford University Press on behalf of British Society for Antimicrobial Chemotherapy 2023.)
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- 2023
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7. [Research progress in role of autophagy in diabetic wound healing and traditional Chinese medicine intervention].
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Wei XT, Liu T, He ZJ, Li JP, Song Y, Chen J, Wang HG, He YX, Wang WW, and Xie J
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- Humans, Ulcer therapy, Medicine, Chinese Traditional, Beclin-1, Quality of Life, Wound Healing, Autophagy, Diabetes Complications, Diabetic Foot drug therapy, Diabetes Mellitus drug therapy, Diabetes Mellitus genetics
- Abstract
Diabetic ulcer(DU) is a chronic and refractory ulcer which often occurs in the foot or lower limbs. It is a diabetic complication with high morbidity and mortality. The pathogenesis of DU is complex, and the therapies(such as debridement, flap transplantation, and application of antibiotics) are also complex and have long cycles. DU patients suffer from great economic and psychological pressure while enduring pain. Therefore, it is particularly important to promote rapid wound healing, reduce disability and mortality, protect limb function, and improve the quality of life of DU patients. By reviewing the relevant literatures, we have found that autophagy can remove DU wound pathogens, reduce wound inflammation, and accelerate ulcer wound healing and tissue repair. The main autophagy-related factors microtubule-binding light chain protein 3(LC3), autophagy-specific gene Beclin-1, and ubiquitin-binding protein p62 mediate autophagy. The traditional Chinese medicine(TCM) treatment of DU mitigates clinical symptoms, accelerates ulcer wound healing, reduces ulcer recurrence, and delays further deterioration of DU. Furthermore, under the guidance of syndrome differentiation and treatment and the overall concept, TCM treatment harmonizes yin and yang, ameliorates TCM syndrome, and treats underlying diseases, thereby curing DU from the root. Therefore, this article reviews the role of autophagy and major related factors LC3, Beclin-1, and p62 in the healing of DU wounds and the intervention of TCM, aiming to provide reference for the clinical treatment of DU wounds and subsequent in-depth studies.
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- 2023
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8. [Research advances in role of angiogenesis in diabetic ulcer and traditional Chinese medicine intervention].
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Liu T, Wei XT, He ZJ, Li JP, Song Y, Chen J, Wang HG, He YX, and Wang WW
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- Humans, Medicine, Chinese Traditional, Ulcer, Vascular Endothelial Growth Factor A metabolism, Wound Healing physiology, Diabetes Complications drug therapy, Diabetes Mellitus
- Abstract
Diabetic ulcer(DU) is one of the common complications of diabetes often occurring in the peripheral blood vessels of lower limbs or feet with a certain degree of damage. It has high morbidity and mortality, a long treatment cycle, and high cost. DU is often clinically manifested as skin ulcers or infections in the lower limbs or feet. In severe cases, it can ulcerate to the surface of tendons, bones or joint capsules, and even bone marrow. Without timely and correct treatment, most of the patients will have ulceration and blackening of the extremities. These patients will not be able to preserve the affected limbs through conservative treatment, and amputation must be performed. The etiology and pathogenesis of DU patients with the above condition are complex, which involves blood circulation interruption of DU wound, poor nutrition supply, and failure in discharge of metabolic waste. Relevant studies have also confirmed that promoting DU wound angiogenesis and restoring blood supply can effectively delay the occurrence and development of wound ulcers and provide nutritional support for wound healing, which is of great significance in the treatment of DU. There are many factors related to angiogenesis, including pro-angiogenic factors and anti-angiogenic factors. The dynamic balance between them plays a key role in angiogenesis. Meanwhile, previous studies have also confirmed that traditional Chinese medicine can enhance pro-angiogenic factors and down-regulate anti-angiogenic factors to promote angiogenesis. In addition, many experts and scholars have proposed that traditional Chinese medicine regulation of DU wound angiogenesis in the treatment of DU has broad prospects. Therefore, by consulting a large number of studies available, this paper expounded on the role of angiogenesis in DU wound and summarized the research advance in traditional Chinese medicine intervention in promoting the expression of angiogenic factors [vascular endothelial growth factor(VEGF), fibroblast growth factor(FGF), and angiopoietin(Ang)] which played a major role in promoting wound angiogenesis in the treatment of DU to provide ideas for further research and new methods for clinical treatment of DU.
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- 2023
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9. [Chemical constituents in Dolomiaea plants and their pharmacological activities: a review].
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Lyu YH, Chen W, Wei YP, Wei XT, Wang J, Ding QQ, Li ZH, He JX, and Zu XP
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- Plant Extracts pharmacology, Anti-Inflammatory Agents, Phytochemicals pharmacology, Asteraceae, Triterpenes, Sesquiterpenes pharmacology
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Dolomiaea plants are perennial herbs in the Asteraceae family with a long medicinal history. They are rich in chemical constituents, mainly including sesquiterpenes, phenylpropanoids, triterpenes, and steroids. The extracts and chemical constituents of Dolomiaea plants have various pharmacological effects, such as anti-inflammatory, antibacterial, antitumor, anti-gastric ulcer, hepatoprotective and choleretic effects. However, there are few reports on Dolomiaea plants. This study systematically reviewed the research progress on the chemical constituents and pharmacological effects of Dolomiaea plants to provide references for the further development and research of Dolomiaea plants.
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- 2023
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10. Mendelian randomization study of causal link from gut microbiota to colorectal cancer.
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Ni JJ, Li XS, Zhang H, Xu Q, Wei XT, Feng GJ, Zhao M, Zhang ZJ, Zhang L, Shen GH, and Li B
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- Humans, Genome-Wide Association Study, Mendelian Randomization Analysis, Polymorphism, Single Nucleotide, Gastrointestinal Microbiome genetics, Microbiota, Colorectal Neoplasms genetics
- Abstract
Recent studies have shown the relevance of gut microbiota in the occurrence and development of colorectal cancer (CRC), but the causal relationship remains unclear in the human population. The present study aims to assess the causal relationship from the gut microbiota to CRC and to identify specific causal microbe taxa via genome-wide association study (GWAS) summary statistics based two-sample Mendelian randomization (MR) analyses. Microbiome GWAS (MGWAS) in the TwinsUK 1,126 twin pairs was used as discovery exposure sample, and MGWAS in 1,812 northern German participants was used as replication exposure sample. GWAS of CRC in 387,156 participants from the UK Biobank (UKB) was used as the outcome sample. Bacteria were grouped into taxa features at both family and genus levels. In the discovery sample, a total of 30 bacteria features including 15 families and 15 genera were analyzed. Five features, including 2 families (Verrucomicrobiaceae and Enterobacteriaceae) and 3 genera (Akkermansia, Blautia, and Ruminococcus), were nominally significant. In the replication sample, the genus Blautia (discovery beta=-0.01, P = 0.04) was successfully replicated (replication beta=-0.18, P = 0.01) with consistent effect direction. Our findings identified genus Blautia that was causally associated with CRC, thus offering novel insights into the microbiota-mediated CRC development mechanism., (© 2022. The Author(s).)
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- 2022
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11. Potential role of gut microbiota and its metabolites in radiation-induced intestinal damage.
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Xin JY, Wang J, Ding QQ, Chen W, Xu XK, Wei XT, Lv YH, Wei YP, Feng Y, and Zu XP
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- Intestines, Gastrointestinal Microbiome, Microbiota
- Abstract
Radiation-induced intestinal damage (RIID) is a serious disease with limited effective treatment. Nuclear explosion, nuclear release, nuclear application and especially radiation therapy are all highly likely to cause radioactive intestinal damage. The intestinal microecology is an organic whole with a symbiotic relationship formed by the interaction between a relatively stable microbial community living in the intestinal tract and the host. Imbalance and disorders of intestinal microecology are related to the occurrence and development of multiple systemic diseases, especially intestinal diseases. Increasing evidence indicates that the gut microbiota and its metabolites play an important role in the pathogenesis and prevention of RIID. Radiation leads to gut microbiota imbalance, including a decrease in the number of beneficial bacteria and an increase in the number of harmful bacteria that cause RIID. In this review, we describe the pathological mechanisms of RIID, the changes in intestinal microbiota, the metabolites induced by radiation, and their mechanism in RIID. Finally, the mechanisms of various methods for regulating the microbiota in the treatment of RIID are summarized., Competing Interests: Declaration of Competing Interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Xianpeng Zu reports financial support was provided by National Natural Science Foundation of China. Xianpeng Zu reports financial support was provided by National Key Research and Development Program of China. Xianpeng Zu reports financial support was provided by Shanghai Municipal Health Commission Project. Xianpeng Zu reports financial support was provided by Three-year Action Plan for Shanghai TCM Development and Inheritance Program. Xianpeng Zu reports was provided by Sailing Program of Naval Medical University., (Copyright © 2022 The Authors. Published by Elsevier Inc. All rights reserved.)
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- 2022
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12. Mendelian randomization analysis identified causal Association of Childhood Obesity with adult major depressive disorder.
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Yan SS, Xu Q, Han BX, Ni JJ, Wei XT, Feng GJ, Zhang H, Zhang YJ, Zhang L, Yu WY, and Pei YF
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- Adult, Child, Humans, Mendelian Randomization Analysis methods, Genome-Wide Association Study, Reproducibility of Results, Body Mass Index, Polymorphism, Single Nucleotide, Pediatric Obesity epidemiology, Pediatric Obesity genetics, Pediatric Obesity complications, Depressive Disorder, Major epidemiology, Depressive Disorder, Major genetics, Depressive Disorder, Major complications
- Abstract
Background: Childhood obesity is associated with adult major depressive disorder (MDD), but their causality is not clear., Methods: We performed a two-sample Mendelian randomization (MR) analysis to explore the causality of childhood body mass index (BMI) and childhood obesity on MDD, followed by a multivariable MR (MVMR) analysis to investigate the potential role of adult BMI in mediating such effect. We accessed genome-wide association summary statistics of childhood BMI, childhood obesity, adult BMI and adult MDD from the Early Growth Genetics consortium (n
BMI = 47 541, nobesity = 24 160), the Genetic Investigation of Anthropometric Traits consortium (nadult_BMI = ∼700 000) and the Psychiatric Genomics consortium (nMDD = 500 199), respectively. The MR-PRESSO test was performed to remove SNPs with potential pleiotropic effect. The MR analysis was performed by inverse-variance weighted test. Further sensitivity analyses, including the MR-Egger intercept test and leave-one-out analysis, were performed to evaluate the reliability of the results., Results: Our study found that childhood obesity might increase the odds of developing MDD in adults (OR = 1.03, 95% CI: 1.01-1.06, p = 2.6 × 10-3 ). Children with higher BMI were more likely to develop MDD in adulthood, with an OR of 1.12 per standard deviation score (SDS) increase in BMI (95% CI: 1.07-1.17, p = 4.4 × 10-7 ). Sensitivity analyses verified the reliability of the causality between childhood BMI/obesity and MDD. Further MVMR results revealed that the impact of childhood BMI on MDD risk was predominantly mediated by adult BMI., Conclusion: Our findings provided evidence of a causal relationship between childhood BMI/obesity and adult MDD, thus providing new insights into the prevention of MDD., (© 2022 World Obesity Federation.)- Published
- 2022
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13. [Impact of endoscopic endonasal approach on quality of life in patients with anterior skull base intra-extracranial extension meningioma].
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Liu JQ, Wang ZL, Zhang Y, Qi P, Yan W, Wei XT, and Yang X
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- Female, Humans, Male, Neoplasm Recurrence, Local pathology, Postoperative Complications, Quality of Life, Retrospective Studies, Skull Base pathology, Skull Base surgery, Meningeal Neoplasms pathology, Meningeal Neoplasms surgery, Meningioma surgery, Skull Base Neoplasms pathology, Skull Base Neoplasms surgery
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Objective: To summarize the experience of endoscopic endonasal approach in the treatment of anterior skull base with intra-extracranial extension meningioma, and to analyze the perioperative quality of life of patients, and to discuss the safety and efficacy of the treatment. Methods: A total of 83 cases of anterior skull base with intra-extracranial extension meningioma admitted to Xuanwu Hospital, Capital Medical University from October 2007 to October 2019, who underwent endoscopic endonasal approach tumor resection, were retrospectively analyzed. The quality of life of the patients were evaluated by Anterior Skull Base Questionnaire (ASBQ) before and after surgery. The surgical techniques, extent of tumor resection, postoperative complications and the changes of patients' quality of life were summarized and analyzed. SPSS 23.0 software was used for statistical analysis. Results: A total of 57 anterior skull base with intra-extracranial extension meningioma patients were enrolled according to the inclusion and exclusion criteria, including 23 males and 34 females, aging (48.6±16.6) years. Fifty cases (87.7%) reached or exceeded Simpson gradeⅠ resection, and 7 cases underwent subtotal resection. Symptoms relief was as follows: headache relief in 45/50 (90%), vision improvement in 18/19 (94.7%), olfaction improvement in 6/45 (13.3%), mental symptoms improvement in 3/9 (33.3%), and seizure relief in 5/7 (71.4%). Postoperative complication included mental symptoms in 5 cases, cerebrospinal fluid leakage in 2 cases, epilepsy in 2 cases, frontal lobe hemorrhage in 1 case, and intracranial infection in 1 case. The follow-up period was 38 to 144 months. There were two cases recurring and no death. ASBQ assessment showed significant improvement in general condition, physical function, role function, mood disorder, pain, vision impairment, and sleep disturbance at 1 month postoperatively, with continued improvement thereafter, and reached stable at 6 months postoperatively. Conclusion: Endoscopic endonasal approach surgery is able to achieve safe and effective tumor resection for anterior skull base intra-extracranial extension meningioma, and the quality of life of patients can be improved steadily.
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- 2022
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14. Mendelian Randomization Analysis Reveals Causal Effects of Plasma Proteome on Body Composition Traits.
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Han BX, Yan SS, Xu Q, Ni JJ, Wei XT, Feng GJ, Zhang H, Li B, Zhang L, and Pei YF
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- Body Composition genetics, Body Mass Index, Genome-Wide Association Study, Humans, Obesity genetics, Polymorphism, Single Nucleotide, Mendelian Randomization Analysis, Proteome
- Abstract
Context: Observational studies have demonstrated associations between plasma proteins and obesity, but evidence of causal relationship remains to be studied., Objective: We aimed to evaluate the causal relationship between plasma proteins and body composition., Methods: We conducted a 2-sample Mendelian randomization (MR) analysis based on the genome-wide association study (GWAS) summary statistics of 23 body composition traits and 2656 plasma proteins. We then performed hierarchical cluster analysis to evaluate the structure and pattern of the identified causal associations, and we performed gene ontology enrichment analysis to explore the functional relevance of the identified proteins., Results: We identified 430 putatively causal effects of 96 plasma proteins on 22 body composition traits (except obesity status) with strong MR evidence (P < 2.53 × 10 - 6, at a Bonferroni-corrected threshold). The top 3 causal associations are follistatin (FST) on trunk fat-free mass (Beta = -0.63, SE = 0.04, P = 2.00 × 10-63), insulin-like growth factor-binding protein 1 (IGFBP1) on trunk fat-free mass (Beta = -0.54, SE = 0.03, P = 1.79 × 10-57) and r-spondin-3 (RSPO3) on WHR (waist circumference/hip circumference) (Beta = 0.01, SE = 4.47 × 10-4, P = 5.45 × 10-60), respectively. Further clustering analysis and pathway analysis demonstrated that the pattern of causal effect to fat mass and fat-free mass may be different., Conclusion: Our findings may provide evidence for causal relationships from plasma proteins to various body composition traits and provide basis for further targeted functional studies., (© The Author(s) 2021. Published by Oxford University Press on behalf of the Endocrine Society. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
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- 2022
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15. Gut Microbiota and Psychiatric Disorders: A Two-Sample Mendelian Randomization Study.
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Ni JJ, Xu Q, Yan SS, Han BX, Zhang H, Wei XT, Feng GJ, Zhao M, Pei YF, and Zhang L
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Evidence supports the observational associations of gut microbiota with a variety of psychiatric disorders, but the causal nature of such associations remains obscure. Aiming to comprehensively investigate their causal relationship and to identify specific causal microbe taxa for psychiatric diseases, we conducted a two-sample Mendelian randomization (MR) analysis of gut microbiome with 15 psychiatric diseases. Specifically, the microbiome genome-wide association study (GWAS) in 18,473 individuals from the MiBioGen study was used as exposure sample, and the GWAS for 15 psychiatric diseases was used as outcome samples. One-hundred ninety bacterial taxa from six levels were available for analysis. At a multiple-testing corrected significance level (phylum P < 5.56 × 10
-3 , class P < 3.33 × 10-3 , order P < 2.63 × 10-3 , family P < 1.67 × 10-3 , genus P < 4.90 × 10-4 , and species P < 3.33 × 10-3 ), the following eight causal associations from seven bacterial features (one phylum + three classes + one order + one family + one species) were identified: family Prevotellaceae with autism spectrum disorder ( P = 5.31 × 10-4 ), class Betaproteobacteria with bipolar disorder ( P = 1.53 × 10-3 ), class Actinobacteria with schizophrenia ( P = 1.33 × 10-3 ), class Bacteroidia and order Bacteroidales with Tourette syndrome ( P = 2.51 × 10-3 and 2.51 × 10-3 ), phylum Actinobacteria and class Actinobacteria with extroversion ( P = 8.22 × 10-4 and 1.09 × 10-3 ), and species Clostridium innocuum with neuroticism ( P = 8.92 × 10-4 ). Sensitivity analysis showed no evidence of reverse causality, pleiotropy, and heterogeneity. Our findings offered novel insights into the gut microbiota-mediated development mechanism of psychiatric disorders., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Ni, Xu, Yan, Han, Zhang, Wei, Feng, Zhao, Pei and Zhang.)- Published
- 2022
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16. [Metabonomics and its application in Chinese medicine processing].
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Wei XT, Wang J, Chen W, Wei YP, Lyu YH, Zu XP, and Zhang XY
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- Chromatography, Liquid, Mass Spectrometry, Metabolomics methods, Quality Control, Drugs, Chinese Herbal, Medicine, Chinese Traditional
- Abstract
Chinese medicine processing is a procedure to process medicinal materials under the guidance of traditional Chinese medicine(TCM) theories by using unique methods in China. The medicinal materials can only be used clinically after proper processing. With the development of the modernization of TCM, it is difficult to solve the problems in the inheritance, development, and internationalization of Chinese medicine processing. Metabonomics, a new omics technology developed at the end of the last century, is used to infer the physiological or pathological conditions of the organism with the methods such as NMR and LC-MS via investigating the changes in endogenous small molecule metabolic network after the organism is stimulated by external environment. Metabonomics coincides with the holistic view of TCM because it displays the characteristics of integrity, comprehensiveness, and dynamics, and it has been widely applied in the field of Chinese medicine processing in recent years. This study summarized the application of metabonomics in the processing mechanism and quality control of Chinese medicine processing and prospected the development of this technology in the field of Chinese medicine processing.
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- 2022
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17. Causal Relationship Between Gut Microbiota and Autoimmune Diseases: A Two-Sample Mendelian Randomization Study.
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Xu Q, Ni JJ, Han BX, Yan SS, Wei XT, Feng GJ, Zhang H, Zhang L, Li B, and Pei YF
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- Adult, Aged, Arthritis, Rheumatoid immunology, Causality, Celiac Disease immunology, Diabetes Mellitus, Type 1 immunology, Genome-Wide Association Study methods, Humans, Inflammatory Bowel Diseases immunology, Lupus Erythematosus, Systemic immunology, Mendelian Randomization Analysis, Middle Aged, Multiple Sclerosis immunology, Polymorphism, Single Nucleotide immunology, Prospective Studies, Autoimmune Diseases immunology, Autoimmune Diseases microbiology, Gastrointestinal Microbiome immunology
- Abstract
Background: Growing evidence has shown that alterations in gut microbiota composition are associated with multiple autoimmune diseases (ADs). However, it is unclear whether these associations reflect a causal relationship., Objective: To reveal the causal association between gut microbiota and AD, we conducted a two-sample Mendelian randomization (MR) analysis., Materials and Methods: We assessed genome-wide association study (GWAS) summary statistics for gut microbiota and six common ADs, namely, systemic lupus erythematosus, rheumatoid arthritis, inflammatory bowel disease, multiple sclerosis, type 1 diabetes (T1D), and celiac disease (CeD), from published GWASs. Two-sample MR analyses were first performed to identify causal bacterial taxa for ADs in discovery samples. Significant bacterial taxa were further replicated in independent replication outcome samples. A series of sensitivity analyses was performed to validate the robustness of the results. Finally, a reverse MR analysis was performed to evaluate the possibility of reverse causation., Results: Combining the results from the discovery and replication stages, we identified one causal bacterial genus, Bifidobacterium . A higher relative abundance of the Bifidobacterium genus was associated with a higher risk of T1D [odds ratio (OR): 1.605; 95% CI, 1.339-1.922; P
FDR = 4.19 × 10-7 ] and CeD (OR: 1.401; 95% CI, 1.139-1.722; PFDR = 2.03 × 10-3 ), respectively. Further sensitivity analyses validated the robustness of the above associations. The results of reverse MR analysis showed no evidence of reverse causality from T1D and CeD to the Bifidobacterium genus., Conclusion: This study implied a causal relationship between the Bifidobacterium genus and T1D and CeD, thus providing novel insights into the gut microbiota-mediated development mechanism of ADs., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Xu, Ni, Han, Yan, Wei, Feng, Zhang, Zhang, Li and Pei.)- Published
- 2022
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18. [Application of metabonomics in study of traditional Chinese medicine syndrome:a review].
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Lyu YH, Xie L, Chen W, Wang J, Wei XT, Wei YP, Zu XP, and He JX
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- Humans, Metabolomics, Syndrome, Drugs, Chinese Herbal, Medicine, Chinese Traditional
- Abstract
Syndrome is a nonlinear "internal-excess external-deficiency", "dynamic spatial-temporal" and "multi-dimensional" complex system and thus only by using a versatile method can the connotation be expounded. Metabonomics, which is dynamic, holistic, and systematic, is consistent with the overall mode of traditional Chinese medicine(TCM)(holistic view and syndrome differentiation and treatment). Therefore, metabonomics is very important for the research on the differentiation, material basis, and metabolic pathways of syndromes, and efficacy on syndromes. This study reviewed the application of metabonomics in the study of TCM syndromes in recent years, which is expected to objectify the research on TCM syndromes.
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- 2022
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19. Mechanisms of Electroacupuncture Pretreatment in Alleviating Myocardial Ischemia Reperfusion Injury: Interactions between the Cerebellar Fastigial Nucleus and Lateral Hypothalamic Area.
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Yu Q, Wu LB, Zhang F, Wei XT, Chen PP, Wang SY, Cai MY, Shu Q, Li LY, Wu ZJ, Cai RL, and Hu L
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- Animals, Cerebellar Nuclei, Hypothalamic Area, Lateral, Rats, gamma-Aminobutyric Acid, Electroacupuncture, Myocardial Reperfusion Injury therapy
- Abstract
Background: Myocardial ischemia reperfusion injury (MIRI) is an important mechanism of post-myocardial infarction injury and a main cause of death in patients with ischemic heart disease. Electroacupuncture (EA) pretreatment is effective for the prevention and treatment of MIRI, but mechanisms mediating the effects of cardiovascular disease EA treatments remain unclear., Objectives: To determine whether the lateral hypothalamus (LHA) and the cerebellar fastigial nucleus (FN) are involved in the protective effects of EA stimulation on MIRI., Methods: EA pretreatment was performed for 7 days before the establishment of the MIRI model. ST-segment changes on electrocardiograms were recorded and the Curtis-Walker arrhythmia score was used to evaluate changes in reperfusion injury. Hematoxylin-eosin staining was applied to evaluate the pathological and morphological changes in myocardial tissue. c-fos expression in the LHA and FN was determined by immunofluorescence staining. Glutamic (Glu) and γ-Aminobutyric acid (GABA) levels were measured using a high-performance liquid chromatography-electrochemical method., Results: EA pretreatment reduced ST-segment elevation, arrhythmia scores, and morphological changes in MIRI myocardial cells in rats, and decreased the c-fos protein expression in LHA/FN nuclei. MIRI was associated with an imbalance between GABA and Glu levels, whereas EA pretreatment increased GABA levels and decreased Glu levels in the LHA/FN., Conclusion: FN and LHA are involved in the EA-mediated attenuation of MIRI. Pretreatment with EA plays a protective role in the myocardium by regulating Glu and GABA release in the LHA and FN.
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- 2021
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20. [Effect of electroacupuncture preconditioning on neuronal activities in lateral hypothalamus area of myocardial ischemia reperfusion injury rats].
- Author
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Zhang YT, Cai RL, Cui S, Wei XT, Yu Q, Wu LB, and Hu L
- Subjects
- Acupuncture Points, Animals, Hypothalamic Area, Lateral, Rats, Rats, Sprague-Dawley, Electroacupuncture, Myocardial Ischemia therapy, Myocardial Reperfusion Injury, Reperfusion Injury
- Abstract
Objective: To observe the effect of electroacupuncture (EA) preconditioning of "Shenmen" (HT7)-"Tongli" (HT5) segment of the Heart Meridian on neuronal electrical activities of lateral hypothalamus area (LHA) in rats with myocardial ischemia reperfusion injury (MIRI), so as to investigate its possible mechanism underlying improvement of MIRI., Methods: Twenty-four SD rats were randomly divided into sham, model, EA and damage + EA (D+EA) groups, with 6 rats in each group. The MIRI model was established by occlusion of the anterior descending branch (ADB) of the left coronary artery for 30 min, followed by reperfusion for 2 h. In the sham operation group, the ADB was only threaded beneath the artery without ligation. EA (2 Hz, 1 V) was applied to bilateral HT7-HT5 for 20 min, once daily for 7 days. In the D+EA group, FN was injected with 0.4 μL of 1 g/L kainic acid solution. Electrocardiogram (ECG) of the neck-thoracic lead was recorded by using PowerLab. The electrical activities of the LHA region were recorded by the implanted microelectrode array (2×4) and Plexon multi-channel acquisition system. Cluster analysis of neuronal signals was carried out by Offline Sorter software. The discharge waveforms, autocorrelation and cross-correlation of neuronal activities were analyzed by using Neuro Explorer software., Results: Compared with the sham group, the ECG-ST height was significantly increased ( P <0.05), the discharge frequency of pyramidal neurons was significantly reduced ( P <0.01), while the discharge frequency of interneurons was increased ( P <0.01) in the model group. After EA treatment, the ECG-ST height was significantly decreased ( P <0.05), the discharge frequency of pyramidal neurons was significantly increased ( P <0.01) relevant to the model group. In comparison with the EA group, the ECG-ST height in the D+EA group was significantly elevated ( P <0.05), whereas the discharge frequency of pyramidal neurons was significantly decreased ( P <0.01). The discharge frequency of interneurons was kept increasing after MIRI. Real-time spectrum analysis showed that the local field potential spectrum energy of the EA group was significantly lower than that of the model group and the D+EA group., Conclusion: EA preconditioning of Heart Meridian can significantly increase the discharge frequency of LHA excitatory pyramidal neurons and reduce the energy of the local field potential spectrum, which maybe one of the important mechanisms of EA in anti -MIRI.
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- 2021
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21. Joint Genome-Wide Association Analyses Identified 49 Novel Loci For Age at Natural Menopause.
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Zhang L, Wei XT, Niu JJ, Lin ZX, Xu Q, Ni JJ, Zhang WL, Han BX, Yan SS, Feng GJ, Zhang H, Yang XL, Zhang ZJ, Hai R, Ren HG, Zhang F, and Pei YF
- Subjects
- Age Factors, Estrogen Replacement Therapy, Female, Humans, Linkage Disequilibrium, Menopause ethnology, Polymorphism, Single Nucleotide, Signal Transduction, Genetic Loci, Genome-Wide Association Study, Menopause genetics
- Abstract
Background: Age at natural menopause (ANM) is an important index for women's health. Either early or late ANM is associated with a series of adverse outcomes later in life. Despite being an inheritable trait, its genetic determinant has not yet been fully understood., Methods: Aiming to better characterize the genetic architecture of ANM, we conducted genome-wide association study (GWAS) meta-analyses in European-specific as well as trans-ancestry samples by using GWAS summary statistics from the following 3 large studies: the Reproductive Genetics Consortium (ReproGen; N = 69 626), the UK Biobank cohort (UKBB; N = 111 593) and the BioBank Japan Project (BBJ; N = 43 861), followed by a series of bioinformatical assessments and functional annotations., Results: By integrating the summary statistics from the 3 GWAS of up to 225 200 participants, this largest meta-analysis identified 49 novel loci and 3 secondary signals that were associated with ANM at the genome-wide significance level (P < 5 × 10-8). No population specificity or heterogeneity was observed at most of the associated loci. Functional annotations prioritized 90 candidate genes at the newly identified loci. Among the 26 traits that were genetically correlated with ANM, hormone replacement therapy (HRT) exerted a causal relationship, implying a causal pattern by which HRT was determined by ANM., Conclusion: Our findings improved our understanding of the etiology of female menopause, as well as shed light on potential new therapies for abnormal menopause., (© The Author(s) 2021. Published by Oxford University Press on behalf of the Endocrine Society. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2021
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22. Advanced Diagnosis of Glioma by Using Emerging Magnetic Resonance Sequences.
- Author
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Wei RL and Wei XT
- Abstract
Glioma, the most common primary brain tumor in adults, can be difficult to discern radiologically from other brain lesions, which affects surgical planning and follow-up treatment. Recent advances in MRI demonstrate that preoperative diagnosis of glioma has stepped into molecular and algorithm-assisted levels. Specifically, the histology-based glioma classification is composed of multiple different molecular subtypes with distinct behavior, prognosis, and response to therapy, and now each aspect can be assessed by corresponding emerging MR sequences like amide proton transfer-weighted MRI, inflow-based vascular-space-occupancy MRI, and radiomics algorithm. As a result of this novel progress, the clinical practice of glioma has been updated. Accurate diagnosis of glioma at the molecular level can be achieved ahead of the operation to formulate a thorough plan including surgery radical level, shortened length of stay, flexible follow-up plan, timely therapy response feedback, and eventually benefit patients individually., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Wei and Wei.)
- Published
- 2021
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23. [Effect of different concentrations of moxa smoke exposure on nasal mucosal injury and expression of serum IL-1, IL-6 and TNF-α in rats].
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Jiang ZM, Wei XT, Zhao LN, Wu LB, Liu L, Li XJ, Wang MJ, Hu L, and Wu ZJ
- Subjects
- Animals, Interleukin-1, Rats, Rats, Sprague-Dawley, Smoke adverse effects, Interleukin-6, Tumor Necrosis Factor-alpha
- Abstract
Objective: To observe the effect of long-term moxa smoke exposure of different concentrations on olfactory function in rats, and provide experimental basis of safety study of moxa smoke produced by moxibustion., Methods: Forty SD rats were randomly divided into a normal control group, a low-concentration moxa smoke group, a moderate-concentration moxa smoke group and a high-concentration moxa smoke group, 10 rats in each one. The rats in the moxa smoke groups were put into three plexiglass moxibustion boxes with different moxa smoke concentrations, 4 hours per times, twice a day for 90 days. The general state of rats was evaluated before and during the experiment. After the intervention, the olfactory function was evaluated by two-bottle experiment (TBE); the morphology of nasal mucosa was observed by HE staining; the apoptosis of olfactory epithelial cells in nasal mucosa was detected by TUNEL method; the serum levels of interleukin-1 (IL-1), interleukin-6 (IL-6) and tumor necrosis factor-α (TNF-α) were detected by ELISA method., Results: In the late stage of moxa smoke exposure (45-90 days into intervention), the behavioral activity of rats in the moderate-concentration moxa smoke group and the high-concentration moxa smoke group was weaker than that in the normal control group, and their response to stimulation was strong, and their mental state was worse. After intervention, the drinking rate of vinegar-water mixture in the moderate-concentration moxa smoke group and the high-concentration moxa smoke group was higher than that in the normal control group and the low-concentration moxa smoke group ( P <0.01). The hierarchical structure of nasal mucosa in the moderate-concentration moxa smoke group and the high-concentration moxa smoke group was unclear, disordered, necrotic and inflammatory cell infiltration was serious; the number of apoptotic cells in olfactory epithelium of nasal mucosa in the moderate-concentration moxa smoke group and the high-concentration moxa smoke group was more than that in the normal control group and the low-concentration moxa smoke group ( P <0.01), that in the high-concentration moxa smoke group was more than the moderate-concentration group ( P <0.01). The serum levels of IL-1, IL-6 and TNF-α in the low-concentration moxa smoke group, the moderate-concentration moxa smoke group and the high-concentration moxa smoke group were higher than the normal control group ( P <0.01), and those in the moderate-concentration moxa smoke group and the high-concentration moxa smoke group were higher than the low-concentration moxa smoke group ( P <0.01), and those in the high-concentration moxa smoke group were higher than moderate-concentration moxa smoke group ( P <0.01)., Conclusion: The long-term exposure to low, moderate and high concentrations of moxa smoke could cause pathological changes in nasal mucosa and increase the serum levels of IL-1, IL-6 and TNF-α; the moderate and high concentrations of moxa smoke exposure could cause a series of damage to olfactory function and reduce olfactory sensitivity in rats.
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- 2021
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24. [Blue light regulates the expression of brain derived neurotrophic factor in the habenula nucleus of depression-like rats induced by light deprivation].
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Meng QH, Jiang JJ, Shang LQ, Yang XH, Wei XT, Xiao QQ, and Hao WD
- Subjects
- Animals, Depression, Disease Models, Animal, Male, Rats, Rats, Sprague-Dawley, Brain-Derived Neurotrophic Factor, Habenula metabolism
- Abstract
Objective: To investigate the regulatory effect of blue light on the expression of brain derived neurotrophic factor (BDNF) in the habenula nucleus of depression-like rats induced by light deprivation. Methods: male SD rats were exposed to white light (white light control group, 20 rats) and constant darkness (depression model group, 60 rats), respectively. 18 days later rats in depression model group were randomly divided into three groups: depression model group (treated with constant darkness), blue light group (treated with blue light) and red light group (treated with red light). Rats in white light control group were kept in white light. All rats exposed to light were in a standard 12∶12 h Light/Dark condition at 20 lx for 36 days. Sucrose preference test was applied to evaluate depression-like symptoms of rats. The c-fos
+ cells in the habenula nucleus, intergeniculate leaflet and ventral lateral geniculate nucleus were detected. The phosphoylation of cAMP-response element binding protein (CREB) and the relative BDNF protein level in the habenula nucleus were measured. Results: Sucrose intake per kg body weight increased in rats exposed to blue light and returned to the level of control group ( P >0.05). Sucrose intake per kg body weight in red light group and depression model group were lower than control group ( P <0.05). More c-fos+ cells were detected in the habenula nucleus, intergeniculate leaflet and ventral lateral geniculate nucleus from blue light group than those from depression model group ( P <0.05). The relative BDNF protein level and the phosphoylation of CREB in the habenula nucleus from blue light group were higher than those from depression model group ( P <0.05). Conclusion: Blue light could relieve depression-like symptoms in light-deprived rats. Exposure to blue light could activate neurons in the habenula nucleus to which intrinsically photosensitive retinal ganglion cells projected. Blue-light-mediated antidepressant effect might involve in the activation of CREB/BDNF signal transduction pathways in the habenula nucleus.- Published
- 2021
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25. Mendelian Randomization Analysis Reveals Causal Effects of the Human Gut Microbiota on Abdominal Obesity.
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Xu Q, Zhang SS, Wang RR, Weng YJ, Cui X, Wei XT, Ni JJ, Ren HG, Zhang L, and Pei YF
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Female, Genome-Wide Association Study, Humans, Male, Middle Aged, Young Adult, Gastrointestinal Microbiome, Mendelian Randomization Analysis, Obesity, Abdominal genetics, Obesity, Abdominal microbiology
- Abstract
Background: Although recent studies have revealed an association between the composition of the gut microbiota and obesity, whether specific gut microbiota cause obesity has not been determined., Objectives: The aim of this study is to determine the causal relationship between specific gut microbiota and abdominal obesity. Based on genome-wide association study (GWAS) summary statistics, we performed a 2-sample Mendelian randomization (MR) analysis to evaluate whether the gut microbiota affects abdominal obesity., Methods: Gut microbiota GWAS in 1126 twin pairs (age range, 18-89 years; 89% were females) from the TwinsUK study were used as exposure data. The primary outcome tested was trunk fat mass (TFM) GWAS in 492,805 participants (age range, 40-69 years; 54% were females) from the UK Biobank. The gut microbiota were classified at family, genus, and species levels. A feature was defined as a distinct family, genus, or species. MR analysis was mainly performed by an inverse variance-weighted test or Wald ratio test, depending on the number of instrumental variables (IVs) involved. A sensitivity analysis was performed on significant results by a weighted median test and a weighted genetic risk score (GRS) analysis., Results: Results of MR analyses provided evidence of a causal association between 3 microbiota features and TFM, including 1 family [Lachnosiraceae; P = 0.02; β = 0.001 (SEE, 4.28 × 10-4)], 1 genus [Bifidobacterium; P = 5.0 × 10-9; β = -0.08 (SEE, 0.14)], and 1 species [Prausnitzii; P = 0.03; β = -0.007 (SEE, 0.003)]. Both the weighted median test and GRS analysis successfully validated the association of the genetically predicted family, Lachnosiraceae (Pweighted median = 0.03; PGRS = 0.004)., Conclusions: Our findings provided evidence of a causal association between gut microbiota and TFM in UK adults and identified specific bacteria taxa that may regulate the fat metabolism, thus offering new direction for the treatment of obesity., (© The Author(s) 2021. Published by Oxford University Press on behalf of the American Society for Nutrition.)
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- 2021
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26. [Effect of electroacupuncture preconditioning on the contents of dopamine and 5-hydroxytryptamine in lateral hypothalamus area and cerebellar fastigial nucleus of rats with myocardial ischemia-reperfusion injury].
- Author
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Yu Q, Cai RL, Shao XF, Zhang YT, Wei XT, and Hu L
- Subjects
- Acupuncture Points, Animals, Cerebellar Nuclei, Dopamine, Hypothalamic Area, Lateral, Rats, Rats, Sprague-Dawley, Serotonin, Electroacupuncture, Myocardial Ischemia, Myocardial Reperfusion Injury therapy
- Abstract
Objective: To observe the effect of electroacupuncture (EA) preconditioning at heart meridian acupoints on the contents of dopamine (DA) and 5-hydroxytryptamine (5-HT) in lateral hypothalamus area (LHA) and cerebellar fastigial nucleus (FN) in the rats with acute myocardial ischemia-reperfusion injury (MIRI), and explore the role and mechanism of LHA and FN in the effect of EA at heart meridian acupoints against acute MIRI., Methods: Sixty SD rats were randomly divided into a sham-operation group, a model group, an EA heart meridian group and an EA lung meridian group, 12 rats in each group, as well as an LHA plus heart meridian group (damage of bilateral LHA) and an FN plus heart meridian group (damage of bilateral FN), 6 rats in each one. Three days after nucleus destruction, EA was applied to "Shenmen" (HT 7) and "Tongli" (HT 5) in the EA heart meridian group, the LHA plus heart meridian group and the FN plus heart meridian group and EA was applied to "Taiyuan" (LU 9) and "Lieque" (LU 7) in the EA lung meridian group, with 1 V in stimulating voltage and 2 Hz in frequency, lasting 20 minutes each time, once a day, for consecutively 7 days before model replication. Except in the sham-operation group, MIRI rat models were duplicated by ligation of the left anterior descending branch of the coronary artery in the rest groups. Using Power lab physiological recorder, ST segment displacement value was recorded before modeling, 30 min after ligation and 120 min after reperfusion separately. The high performance liquid chromatography-electrochemical detection and analysis system was adopted to determine the contents of DA and 5-HT in LHA and FN dialysate after rat modeling in each group., Results: In comparison of ST segment displacement value 30 min after ligation and 120 min after reperfusion among groups, the value in the model group was higher than that in the sham-operation group ( P <0.01), those in the EA heart meridian group, the LHA plus heart meridian group, the FN plus heart meridian group and the EA lung meridian group were lower than those in the model group successively ( P <0.01) and those in the EA heart meridian group were lower than those in the EA lung meridian group, the LHA plus heart meridian group and the FN plus heart meridian group successively ( P <0.01). The contents of DA and 5-HT in FN and LHA in the model group were lower than those in the sham-operation group ( P <0.01). Except in the groups with nucleus lesions, the contents of DA and 5-HT in FN and LHA of each intervention group were higher than those in the model group ( P <0.01), the contents of DA and 5-HT in FN in the EA heart meridian group were higher than those in the EA lung meridian group and the LHA plus heart meridian group ( P <0.01) and the content of 5-HT in LHA was higher than those in the EA lung meridian group and the FN plus heart meridian group ( P <0.01) separately, the content of DA in LHA was higher than that in the EA lung meridian group ( P <0.01)., Conclusion: EA preconditioning at heart meridian acupoints can effectively alleviate myocardial injury in acute MIRI rats, during which, DA and 5-HT in LHA and FN may be the important material basis.
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- 2021
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27. Pleiotropic genomic variants at 17q21.31 associated with bone mineral density and body fat mass: a bivariate genome-wide association analysis.
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Wei XT, Feng GJ, Zhang H, Xu Q, Ni JJ, Zhao M, Yang XL, Tian Q, Shen H, Hai R, Deng HW, Zhang L, and Pei YF
- Subjects
- Aged, Bone Density genetics, Complement C1q genetics, DNA Repair Enzymes genetics, Female, Humans, Kinesins genetics, Middle Aged, Nuclear Proteins genetics, RNA Splicing Factors genetics, Chromosomes, Human, Pair 17 genetics, Genetic Pleiotropy, Obesity genetics, Osteoporosis genetics, Polymorphism, Single Nucleotide
- Abstract
Osteoporosis and obesity are two severe complex diseases threatening public health worldwide. Both diseases are under strong genetic determinants as well as genetically correlated. Aiming to identify pleiotropic genes underlying obesity and osteoporosis, we performed a bivariate genome-wide association (GWA) meta-analysis of hip bone mineral density (BMD) and total body fat mass (TBFM) in 12,981 participants from seven samples, and followed by in silico replication in the UK biobank (UKB) cohort sample (N = 217,822). Combining the results from discovery meta-analysis and replication sample, we identified one novel locus, 17q21.31 (lead SNP rs12150327, NC_000017.11:g.44956910G > A, discovery bivariate P = 4.83 × 10
-9 , replication P = 5.75 × 10-5 ) at the genome-wide significance level (ɑ = 5.0 × 10-8 ), which may have pleiotropic effects to both hip BMD and TBFM. Functional annotations highlighted several candidate genes, including KIF18B, C1QL1, and PRPF19 that may exert pleiotropic effects to the development of both body mass and bone mass. Our findings can improve our understanding of the etiology of osteoporosis and obesity, as well as shed light on potential new therapies.- Published
- 2021
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28. Identification of pleiotropic loci underlying hip bone mineral density and trunk lean mass.
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Feng GJ, Wei XT, Zhang H, Yang XL, Shen H, Tian Q, Deng HW, Zhang L, and Pei YF
- Subjects
- Adult, Aged, Cohort Studies, Ethnicity genetics, Female, Genetic Heterogeneity, Genotyping Techniques, Humans, Male, Middle Aged, Molecular Sequence Annotation, Observational Studies as Topic statistics & numerical data, Osteoporosis genetics, Polymorphism, Single Nucleotide, Racial Groups genetics, Body Composition genetics, Bone Density genetics, Femur chemistry, Genetic Pleiotropy, Genome-Wide Association Study, Torso anatomy & histology
- Abstract
Bone mineral density (BMD) and lean body mass (LBM) not only have a considerable heritability each, but also are genetically correlated. However, common genetic determinants shared by both traits are largely unknown. In the present study, we performed a bivariate genome-wide association study (GWAS) meta-analysis of hip BMD and trunk lean mass (TLM) in 11,335 subjects from 6 samples, and performed replication in estimated heel BMD and TLM in 215,234 UK Biobank (UKB) participants. We identified 2 loci that nearly attained the genome-wide significance (GWS, p < 5.0 × 10
-8 ) level in the discovery GWAS meta-analysis and that were successfully replicated in the UKB sample: 11p15.2 (lead SNP rs12800228, discovery p = 2.88 × 10-7 , replication p = 1.95 × 10-4 ) and 18q21.32 (rs489693, discovery p = 1.67 × 10-7 , replication p = 1.17 × 10-3 ). The above 2 pleiotropic loci may play a pleiotropic role for hip BMD and TLM development. So our findings provide useful insights that further enhance our understanding of genetic interplay between BMD and LBM.- Published
- 2021
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29. Assessing causal relationship from gut microbiota to heel bone mineral density.
- Author
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Ni JJ, Yang XL, Zhang H, Xu Q, Wei XT, Feng GJ, Zhao M, Pei YF, and Zhang L
- Subjects
- Bone Density, Child, Genome-Wide Association Study, Heel, Humans, Mendelian Randomization Analysis, Gastrointestinal Microbiome genetics
- Abstract
Recent studies have demonstrated the important role played by gut microbiota in regulating bone development, but the evidence of such causal relationship is still sparse in human population. The aim of this study is to assess the causal relationship from gut microbiota to bone development and to identify specific causal bacteria taxa via a Mendelian randomization (MR) approach. A genome-wide association study (GWAS) summary statistic based two-sample MR analysis was performed. Summary statistics of microbiome GWAS (MGWAS) in 1126 twin pairs of the TwinsUK study was used as discovery sample, and the MGWAS in 984 Dutch participants from the LifeLines-DEEP cohort was used as replication sample. Estimated heel bone mineral density (eBMD) GWAS in 426,824 participants from the UK biobank (UKB) cohort was used as outcome. Bacteria were grouped into taxa features at both order and family levels. In the discovery sample, a total of 25 bacteria features including 9 orders and 16 families were analyzed. Fourteen features (5 orders + 9 families) were nominally significant, including 5 orders (Bacteroidales, Clostridiales, Lactobacillales, Pasteurellales and Verrucomicrobiales) and 9 families (Bacteroidaceae, Clostridiaceae, Lachnospiraceae, Mogibacteriaceae, Pasteurellaceae, Porphyromonadaceae, Streptococcaceae, Verrucomicrobiaceae and Veillonellaceae). One order Clostridiales and its child taxon, family Lachnospiraceae, were successfully replicated in the replication sample (Clostridiales P
discovery = 3.32 × 10-3 Preplication = 7.29 × 10-3 ; Lachnospiraceae Pdiscovery = 0.03 Preplication = 7.29 × 10-3 ). Our findings provided evidence of causal relationship from microbiota to bone development, as well as identified specific bacteria taxa that regulated bone mass variation, thus providing new insights into the microbiota mediated bone development mechanism., (Copyright © 2020 Elsevier Inc. All rights reserved.)- Published
- 2021
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30. Behavior-Oriented Nomogram for the Stratification of Lower-Grade Gliomas to Improve Individualized Treatment.
- Author
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Wei RL, Zhang LW, Li JG, Yang FD, Xue YK, and Wei XT
- Abstract
Secondary glioblastomas (sGBM) are derived from previously lower-grade [World Health Organization (WHO) grades II or III] gliomas. Lower-grade benign-behaving gliomas may retain their former grade following recurrence, or may become malignant higher-grade glioblastomas. Prediction of tumor behavior in lower-grade gliomas is critical for individualized glioma therapy. A total of 89 patients were included between January 2000 and January 2019 in the present study to establish a nomogram via univariate and multivariate logistic regression analyses. Nomogram predictive performance was tested in the validation group. We then analyzed 36 O-6-methylguanine-DNA methyltransferase ( MGMT ) unmethylated lower-grade gliomas from patients seen at West China Hospital of Sichuan University. Survival statistics were calculated with the Kaplan-Meier method. Two clinical factors (molecular diagnosis and WHO grade), five radiological factors (location, cortical involvement, multicentricity, uniformity, and margin enhancement), one biomarker ( 1p19q codeletion), and a combination of three biomarkers ( IDH +/ ATRX -/ TP53 -) were associated with glioma upgrading. Nomograms positive for these prognostic factors had an AUC of 0.880 in the derivation group and 0.857 in the validation group. The calibration and score-stratified survival curves for the derivation group and validation group were good. An operational nomogram was published at https://warrenwrl.shinyapps.io/DynNomapp/. The overall survival of secondary gliomas in the MGMT-unmethylated cohort were influenced independently by the use of temozolomide during the treatment of formerly low-grade gliomas ( p =0.00096). Clinical and radiological factors and biomarker-based behavior-oriented nomograms may offer a feasible identification tool for the detection of sGBM precursors. This method may further assist neurosurgeons with the stratification of lower-grade glioma cases and thus the development of better, more individualized treatment plans., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2020 Wei, Zhang, Li, Yang, Xue and Wei.)
- Published
- 2020
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31. A Hematological-Related Prognostic Scoring System for Patients With Newly Diagnosed Glioblastoma.
- Author
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Zhao C, Li LQ, Yang FD, Wei RL, Wang MK, Song DX, Guo XY, Du W, and Wei XT
- Abstract
Background: Glioblastoma is the most common primary malignant brain tumor. Recent studies have shown that hematological biomarkers have become a powerful tool for predicting the prognosis of patients with cancer. However, most studies have only investigated the prognostic value of unilateral hematological markers. Therefore, we aimed to establish a comprehensive prognostic scoring system containing hematological markers to improve the prognostic prediction in patients with glioblastoma., Patients and Methods: A total of 326 patients with glioblastoma were randomly divided into a training set and external validation set to develop and validate a hematological-related prognostic scoring system (HRPSS). The least absolute shrinkage and selection operator Cox proportional hazards regression analysis was used to determine the optimal covariates that constructed the scoring system. Furthermore, a quantitative survival-predicting nomogram was constructed based on the hematological risk score (HRS) derived from the HRPSS. The results of the nomogram were validated using bootstrap resampling and the external validation set. Finally, we further explored the relationship between the HRS and clinical prognostic factors., Results: The optimal cutoff value for the HRS was 0.839. The patients were successfully classified into different prognostic groups based on their HRSs (P < 0.001). The areas under the curve (AUCs) of the HRS were 0.67, 0.73, and 0.78 at 0.5, 1, and 2 years, respectively. Additionally, the 0.5-, 1-y, and 2-y AUCs of the HRS were 0.51, 0.70, and 0.79, respectively, which validated the robust prognostic performance of the HRS in the external validation set. Based on both univariate and multivariate analyses, the HRS possessed a strong ability to predict overall survival in both the training set and validation set. The nomogram based on the HRS displayed good discrimination with a C-index of 0.81 and good calibration. In the validation cohort, a high C-index value of 0.82 could still be achieved. In all the data, the HRS showed specific correlations with age, first presenting symptoms, isocitrate dehydrogenase mutation status and tumor location, and successfully stratified them into different risk subgroups., Conclusions: The HRPSS is a powerful tool for accurate prognostic prediction in patients with newly diagnosed glioblastoma., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2020 Zhao, Li, Yang, Wei, Wang, Song, Guo, Du and Wei.)
- Published
- 2020
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32. The genetic architecture of appendicular lean mass characterized by association analysis in the UK Biobank study.
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Pei YF, Liu YZ, Yang XL, Zhang H, Feng GJ, Wei XT, and Zhang L
- Subjects
- Adult, Aged, Biological Specimen Banks, Diabetes Mellitus, Type 2 genetics, Female, Genetic Variation, Genome, Human genetics, Humans, Male, Middle Aged, Mutation genetics, Obesity genetics, Sarcopenia genetics, United Kingdom, Genome-Wide Association Study, Muscle Strength genetics, Muscle, Skeletal
- Abstract
Appendicular lean mass (ALM) is a heritable trait associated with loss of lean muscle mass and strength, or sarcopenia, but its genetic determinants are largely unknown. Here we conducted a genome-wide association study (GWAS) with 450,243 UK Biobank participants to uncover its genetic architecture. A total of 1059 conditionally independent variants from 799 loci were identified at the genome-wide significance level (p < 5 × 10
-9 ), all of which were also significant at p < 5 × 10-5 in both sexes. These variants explained ~15.5% of the phenotypic variance, accounting for more than one quarter of the total ~50% GWAS-attributable heritability. There was no difference in genetic effect between sexes or among different age strata. Heritability was enriched in certain functional categories, such as conserved and coding regions, and in tissues related to the musculoskeletal system. Polygenic risk score prediction well distinguished participants with high and low ALM. The findings are important not only for lean mass but also for other complex diseases, such as type 2 diabetes, as ALM is shown to be a protective factor for type 2 diabetes.- Published
- 2020
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33. Four pleiotropic loci associated with fat mass and lean mass.
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Liu Y, Ran S, Lin Y, Zhang YX, Yang XL, Wei XT, Jiang ZX, He X, Zhang H, Feng GJ, Shen H, Tian Q, Deng HW, Zhang L, and Pei YF
- Subjects
- Adult, Aged, Genotype, Humans, Middle Aged, Phenotype, Polymorphism, Single Nucleotide, United Kingdom, Adiposity genetics, Genetic Pleiotropy, Genome-Wide Association Study
- Abstract
Background: Fat mass and lean mass are two biggest components of body mass. Both fat mass and lean mass are under strong genetic determinants and are correlated., Methods: We performed a bivariate genome-wide association meta-analysis of (lean adjusted) leg fat mass and (fat adjusted) leg lean mass in 12,517 subjects from 6 samples, and followed by in silico replication in large-scale UK biobank cohort sample (N = 370 097)., Results: We identified four loci that were significant at the genome-wide significance (GWS, α = 5.0 × 10
-8 ) level at the discovery meta-analysis, and successfully replicated in the replication sample: 2q36.3 (rs1024137, pdiscovery = 3.32 × 10-8 , preplication = 4.07 × 10-13 ), 5q13.1 (rs4976033, pdiscovery = 1.93 × 10-9 , preplication = 6.35 × 10-7 ), 12q24.31 (rs4765528, pdiscovery = 7.19 × 10-12 , preplication = 1.88 × 10-11 ) and 18q21.32 (rs371326986, pdiscovery = 9.04 × 10-9 , preplication = 2.35 × 10-95 ). The above four pleiotropic loci may play a pleiotropic role for fat mass and lean mass development., Conclusions: Our findings further enhance the understanding of the genetic association between fat mass and lean mass and provide a new theoretical basis for their understanding.- Published
- 2020
- Full Text
- View/download PDF
34. Pleiotropic loci underlying bone mineral density and bone size identified by a bivariate genome-wide association analysis.
- Author
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Zhang H, Liu L, Ni JJ, Wei XT, Feng GJ, Yang XL, Xu Q, Zhang ZJ, Hai R, Tian Q, Shen H, Deng HW, Pei YF, and Zhang L
- Subjects
- Bone Density genetics, Humans, Phenotype, Polymorphism, Single Nucleotide, Genome-Wide Association Study, Osteoporosis genetics
- Abstract
Aiming to identify pleiotropic genomic loci for bone mineral density and bone size, we performed a bivariate GWAS in five discovery samples and replicated in two large-scale samples. We identified 2 novel loci at 2q37.1 and 6q26. Our findings provide insight into common genetic architecture underlying both traits., Introduction: Bone mineral density (BMD) and bone size (BS) are two important factors that contribute to the development of osteoporosis and osteoporotic fracture. Both BMD and BS are highly heritable and they are genetically correlated. In this study, we aim to identify pleiotropic loci associated with BMD and BS., Methods: We conducted a bivariate genome-wide association (GWA) analysis of hip BMD and hip BS in 6180 participants from 5 samples, followed by in silico replication in the UK Biobank study of BMD (N = 426,824) and the deCODE study of BS (N = 28,954), respectively., Results: SNPs from 2 genomic loci were significant at the genome-wide significance (GWS) level (p lt; 5 × 10
-8 ) in the discovery samples and were successfully replicated in the replication samples (2q37.1, lead SNP rs7575512, discovery p = 1.49 × 10-10 , replication p = 0.05; 6q26, lead SNP rs1040724, discovery p = 1.95 × 10-8 , replication p = 0.03). Functional annotations suggested functional relevance of the identified variants to bone development., Conclusion: Our findings provide insight into the common genetic architecture underlying BMD and BS, and enhance our understanding of the potential mechanism of osteoporosis fracture.- Published
- 2020
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- View/download PDF
35. Semimechanistic Modeling of Eravacycline Pharmacodynamics Using In Vitro Time-Kill Data with MIC Incorporated in an Adaptive Resistance Function.
- Author
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Nguyen K, Bensman TJ, Wei XT, and Moore JN
- Subjects
- Microbial Sensitivity Tests, Tetracyclines, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Anti-Infective Agents
- Abstract
Effective bacterial infection eradication requires not only potent antibacterial agents but also proper dosing strategies. Current practices generally utilize point estimates of the effects of therapeutic agents, even though the actual kinetics of exposure are much more complex and relevant. Here, we use a full time course of the observed in vitro effects to develop a semimechanistic pharmacokinetic-pharmacodynamic model for eravacycline against multiple Gram-negative bacterial pathogens. This model incorporates components such as pharmacokinetics, bacterial life cycle, and drug effects to quantitatively describe the time course of antibacterial killing and the emergence of resistance. Model discrimination was performed by comparing goodness of fit, convergence diagnostics, and objective function values. Models were validated by assessing their abilities to describe bacterial count time courses in visual predictive checks. The final model describes 576 bacterial counts (expressed in log
10 CFU per milliliter) from 144 in vitro time-kill experiments with low residual error and high precision. We characterize antibacterial susceptibility as a function of the MIC and adaptive resistance. In doing so, we show that the MIC is proportional to initial susceptibility at 0 h and the development of resistance over the course of 16 h. Altogether, this model may be useful in supporting dose selection, since it incorporates in vitro pharmacodynamics and clinically observed individual drug susceptibilities.- Published
- 2020
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- View/download PDF
36. Two novel pleiotropic loci associated with osteoporosis and abdominal obesity.
- Author
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Liu L, Yang XL, Zhang H, Zhang ZJ, Wei XT, Feng GJ, Liu J, Peng HP, Hai R, Shen H, Tian Q, Deng HW, Pei YF, and Zhang L
- Subjects
- Animals, Body Mass Index, Cohort Studies, Female, Femur Neck physiology, Genetic Predisposition to Disease, Genome-Wide Association Study, Genotype, Humans, Male, Mendelian Randomization Analysis, Mice, Mice, Knockout, Polymorphism, Single Nucleotide genetics, Promoter Regions, Genetic genetics, Genetic Pleiotropy genetics, Interferon-gamma genetics, Obesity, Abdominal genetics, Osteoporosis genetics, Protein Kinase C-theta genetics, Quantitative Trait Loci genetics
- Abstract
Aiming to uncover a shared genetic basis of abdominal obesity and osteoporosis, we performed a bivariate GWAS meta-analysis of femoral neck BMD (FNK-BMD) and trunk fat mass adjusted by trunk lean mass (TFM
adj ) in 11,496 subjects from 6 samples, followed by in silico replication in the large-scale UK Biobank (UKB) cohort. A series of functional investigations were conducted on the identified variants. Bivariate GWAS meta-analysis identified two novel pleiotropic loci 12q15 (lead SNP rs73134637, p = 3.45 × 10-7 ) and 10p14 (lead SNP rs2892347, p = 2.63 × 10-7 ) that were suggestively associated and that were replicated in the analyses of related traits in the UKB sample (osteoporosis p = 0.06 and 0.02, BMI p = 0.03 and 4.61 × 10-3 , N up to 499,520). Cis-eQTL analysis demonstrated that allele C at rs73134637 was positively associated with IFNG expression in whole blood (N = 369, p = 0.04), and allele A at rs11254759 (10p14, p = 9.49 × 10-7 ) was negatively associated with PRKCQ expression in visceral adipose tissue (N = 313, p = 0.04) and in lymphocytes (N = 117, p = 0.03). As a proof-of-principle experiment, the function of rs11254759, which is 235 kb 5'-upstream from PRKCQ gene, was investigated by the dual-luciferase reporter assay, which clearly showed that the haplotype carrying rs11254759 regulated PRKCQ expression by upregulating PRKCQ promoter activity (p = 4.60 × 10-7 ) in an allelic specific manner. Mouse model analysis showed that heterozygous PRKCQ deficient mice presented decreased fat mass compared to wild-type control mice (p = 3.30 × 10-3 ). Mendelian randomization analysis demonstrated that both FNK-BMD and TFMadj were causally associated with fracture risk (p = 1.26 × 10-23 and 1.18 × 10-11 ). Our findings may provide useful insights into the genetic association between osteoporosis and abdominal obesity.- Published
- 2020
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37. Bivariate genome-wide association analysis identified three pleiotropic loci underlying osteoporosis and obesity.
- Author
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Pei YF, Wei XT, Feng GJ, Zhang H, Yang XL, Zhang SS, Fang C, Huang Y, Tian Q, Deng HW, and Zhang L
- Subjects
- Female, Genetic Loci genetics, Humans, Male, Obesity complications, Obesity pathology, Osteoporosis complications, Osteoporosis pathology, Polymorphism, Single Nucleotide genetics, Genetic Predisposition to Disease, Genome-Wide Association Study, Obesity genetics, Osteoporosis genetics
- Published
- 2020
- Full Text
- View/download PDF
38. Polaribacter aquimarinus sp. nov., isolated from the surface of a marine red alga.
- Author
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Xu W, Chen XY, Wei XT, Lu DC, and Du ZJ
- Subjects
- Bacterial Typing Techniques, Flavobacteriaceae genetics, Genome, Bacterial, Genomics methods, Genotype, Phylogeny, RNA, Ribosomal, 16S genetics, Sequence Analysis, DNA, Aquatic Organisms, Flavobacteriaceae classification, Flavobacteriaceae isolation & purification, Rhodophyta microbiology
- Abstract
A Gram-stain negative, non-motile, asporogenous, aerobic and rod-shaped bacterial strain, designated ZY113
T , was isolated from the surface of a marine red alga collected from the coast in Weihai, Shandong Province, China. Strain ZY113T was found to grow at 4-37 °C (optimum at 28-30 °C), with 1.0-7.0% (w/v) NaCl (optimum 2.0-3.0%) and at pH 6.0-9.0 (optimum 7.0-8.0). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain ZY113T is a member of the genus Polaribacter, with Polaribacter dokdonensis KCTC 12392T as a close relative (97.4% similarity). The sole respiratory quinone was found to be menaquinone 6 (MK-6) and the major fatty acids were identified as iso-C15:0 , iso-C15:0 3-OH and iso-C13:0 . The polar lipids were found to consist of phosphatidylethanolamine, two unidentified aminolipids and three unidentified lipids. The G + C content of the genomic DNA was determined to be 30.1 mol%. On the basis of phenotypic, genotypic and phylogenetic analysis, strain ZY113T is considered to represent a novel species of the genus Polaribacter, for which the name Polaribacter aquimarinus sp. nov. is proposed. The type strain is ZY113T (= KCTC 62374T = MCCC 1H00296T ).- Published
- 2020
- Full Text
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39. Two functional variants at 6p21.1 were associated with lean mass.
- Author
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Pei YF, Hu WZ, Yang XL, Wei XT, Feng GJ, Zhang H, Shen H, Tian Q, Deng HW, and Zhang L
- Subjects
- Aged, Animals, Body Mass Index, Cell Line, Female, Genetic Predisposition to Disease, Genome-Wide Association Study, Humans, I-kappa B Proteins genetics, Linkage Disequilibrium, Male, Mice, Middle Aged, Proto-Oncogene Proteins genetics, Quantitative Trait Loci, Sarcopenia pathology, Thinness pathology, Chromosomes, Human, Pair 6 genetics, Polymorphism, Single Nucleotide, Sarcopenia genetics, Thinness genetics
- Abstract
Background: Low lean body mass is the most important predictor of sarcopenia with strong genetic background. The aim of this study was to uncover genetic factors underlying lean mass development., Materials and Methods: We performed a genome-wide association study (GWAS) of fat-adjusted leg lean mass in the Framingham Heart Study (FHS, N = 6587), and replicated in the Women's Health Initiative-African American sub-sample (WHI-AA, N = 847) and the Kansas City Osteoporosis Study (KCOS, N = 2219). We also cross-validated significant variants in the publicly available body mass index (BMI) summary results (N ~ 700,000). We then performed a series of functional investigations on the identified variants., Results: Four correlated SNPs at 6p21.1 were identified at the genome-wide significance (GWS, α = 5.0 × 10
-8 ) level in the discovery FHS sample (rs551145, rs524533, rs571770, and rs545970, p = 3.40-9.77 × 10-9 ), and were successfully replicated in both the WHI-AA and the KCOS samples (one-sided p = 1.61 × 10-3 -0.04). They were further cross-validated by the large-scale BMI summary results (p = 7.0-9.8 × 10-3 ). Cis-eQTL analyses associated these SNPs with the NFKBIE gene expression. Electrophoresis mobility shift assay (EMSA) in mouse C2C12 myoblast cells implied that rs524533 and rs571770 were bound to an unknown transcription factor in an allelic specific manner, while rs551145 and rs545970 did not. Dual-luciferase reporter assay revealed that both rs524533 and rs571770 downregulated luciferase expression by repressing promoter activity. Moreover, the regulation pattern was allelic specific, strengthening the evidence towards their differential regulatory effects., Conclusions: Through a large-scale GWAS followed by a series of functional investigations, we identified 2 correlated functional variants at 6p21.1 associated with leg lean mass. Our findings not only enhanced our understanding of molecular basis of lean mass development but also provided useful candidate genes for further functional studies.- Published
- 2019
- Full Text
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40. Three Novel Loci for Infant Head Circumference Identified by a Joint Association Analysis.
- Author
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Yang XL, Zhang SY, Zhang H, Wei XT, Feng GJ, Pei YF, and Zhang L
- Abstract
As an important trait at birth, infant head circumference (HC) is associated with a variety of intelligence- and mental-related conditions. Despite being dominated by genetics, the mechanism underlying the variation of HC is poorly understood. Aiming to uncover the genetic basis of HC, we performed a genome-wide joint association analysis by integrating the genome-wide association summary statistics of HC with that of its two related traits, birth length and birth weight, using a recently developed integrative method, multitrait analysis of genome-wide association (MTAG), and performed in silico replication in an independent sample of intracranial volume ( N = 26,577). We then conducted a series of bioinformatic investigations on the identified loci. Combining the evidence from both the MTAG analysis and the in silico replication, we identified three novel loci at the genome-wide significance level (α = 5.0 × 10
-8 ): 3q23 [lead single nucleotide polymorphism (SNP) rs9846396, pMTAG = 3.35 × 10-8 , preplication = 0.01], 7p15.3 (rs12534093, pMTAG = 2.00 × 10-8 , preplication = 0.004), and 9q33.3 (rs7048271 pMTAG = 9.23 × 10-10 , preplication = 1.14 × 10-4 ). Each of the three lead SNPs was associated with at least one of eight brain-related traits including intelligence and educational attainment. Credible risk variants, defined as those SNPs located within 500 kb of the lead SNP and with p values within two orders of magnitude of the lead SNP, were enriched in DNase I hypersensitive site region in brain. Nine candidate genes were prioritized at the three novel loci using multiple sources of information. Gene set enrichment analysis identified one associated pathway GO:0048009, which participates in the development of nervous system. Our findings provide useful insights into the genetic basis of HC and the relationship between brain growth and mental health., (Copyright © 2019 Yang, Zhang, Zhang, Wei, Feng, Pei and Zhang.)- Published
- 2019
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41. Causal link between lipid profile and bone mineral density: A Mendelian randomization study.
- Author
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Yang XL, Cui ZZ, Zhang H, Wei XT, Feng GJ, Liu L, Liu YZ, Pei YF, and Zhang L
- Subjects
- Body Mass Index, Genome-Wide Association Study, Humans, Linkage Disequilibrium genetics, Polymorphism, Single Nucleotide genetics, Regression Analysis, Bone Density genetics, Lipids blood, Mendelian Randomization Analysis
- Abstract
The level of serum lipids is associated with bone mineral density (BMD), an important skeletal trait. Yet the causality has not been determined. Here we performed a Mendelian randomization (MR) analysis to test potential causal links between BMD and lipid profile, i.e., low-density lipoprotein cholesterol (LDC-c), total cholesterol (TC), triglyceride (TG) and high-density lipoprotein cholesterol (HDL-c). We observed causal effect of LDL-c, TC and TG to BMD, and reversely the effect of BMD to HDL-c. We further explored the effect of body mass index (BMI) in these causalities and found that the effect of LDL-c, TC and TG to BMD is independent of BMI. Our findings provided useful information in the clinical relevance of blood lipids on BMD variation and osteoporosis risk., (Copyright © 2019 Elsevier Inc. All rights reserved.)
- Published
- 2019
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- View/download PDF
42. Prognostic value of preoperative hematological markers combined with molecular pathology in patients with diffuse gliomas.
- Author
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Zhang ZY, Zhan YB, Zhang FJ, Yu B, Ji YC, Zhou JQ, Bai YH, Wang YM, Wang L, Jing Y, Duan WC, Sun C, Sun T, Zhao HB, Li K, Wang WQ, Li RY, Sun HW, Zhai G, Wang SK, Wei XT, Yang B, Yan DM, Liu XZ, and Wang WW
- Subjects
- Adult, Female, Humans, Male, Middle Aged, Neoplasm Grading, Prognosis, Risk Factors, Biomarkers, Tumor blood, Brain Neoplasms blood, Brain Neoplasms pathology, Glioma blood, Glioma pathology, Pathology, Molecular
- Abstract
The prediction of clinical outcome for patients with infiltrative gliomas is challenging. Although preoperative hematological markers have been proposed as predictors of survival in glioma and other cancers, systematic investigations that combine these data with other relevant clinical variables are needed to improve prognostic accuracy and patient outcomes. We investigated the prognostic value of preoperative hematological markers, alone and in combination with molecular pathology, for the survival of 592 patients with Grade II-IV diffuse gliomas. On univariate analysis, increased neutrophil-to-lymphocyte ratio (NLR), platelet-to-lymphocyte ratio (PLR), and monocyte-to-lymphocyte ratio (MLR), and decreased albumin-to-globulin ratio (AGR), all predicted poor prognosis in Grade II/III gliomas. Multivariate analysis incorporating tumor status based on the presence of IDH mutations, TERT promoter mutations, and 1p/19q codeletion showed that in lower-grade gliomas, high NLR predicted poorer survival for the triple-negative, IDH mutation only, TERT mutation only, and IDH and TERT mutation groups. NLR was an independent prognostic factor in Grade IV glioma. We therefore propose a prognostic model for diffuse gliomas based on the presence of IDH and TERT promoter mutations, 1p/19q codeletion, and NLR. This model classifies lower-grade gliomas into nine subgroups that can be combined into four main risk groups based on survival projections.
- Published
- 2019
- Full Text
- View/download PDF
43. Long noncoding RNA ENST00000413528 sponges microRNA-593-5p to modulate human glioma growth via polo-like kinase 1.
- Author
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Zhang R, Wei RL, Du W, Zhang LW, Du T, Geng YD, and Wei XT
- Subjects
- Animals, Apoptosis, Cell Cycle Proteins genetics, Cell Line, Tumor, Cell Proliferation, Glioma etiology, Glioma genetics, Humans, Mice, Mice, Inbred BALB C, Protein Serine-Threonine Kinases genetics, Proto-Oncogene Proteins genetics, Signal Transduction physiology, Polo-Like Kinase 1, Brain Neoplasms pathology, Cell Cycle Proteins physiology, Glioma pathology, MicroRNAs physiology, Protein Serine-Threonine Kinases physiology, Proto-Oncogene Proteins physiology, RNA, Long Noncoding physiology
- Abstract
Aims: In this study, we examined the expression of lncRNA ENST00000413528 in glioma and determined its role in glioma development., Methods: LncRNA ENST00000413528 was detected in glioma tissues by lncRNA microarray. Then, we performed real-time PCR, CCK-8, colony formation assay, flow cytometry, caspase-3/7 assay and animal experiment to detect the function of ENST00000413528 in glioma after ENST00000413528 knockdown. Subsequent bioinformatics analysis, luciferase reporter assays and RNA immunoprecipitation (RIP) assay western blotting indicated possible downstream regulatory molecules. The expression of PLK1 in glioma tissues was also examined by immunohistochemistry staining., Results: Expression of ENST00000413528 was significantly increased in glioma tissues and LN229 and U251 cells. PLK1 protein could not be detected in peritumoral brain edema (PTBE) tissues; however, it showed an increasing number of positively cytoplasmic stained from WHO-Grade II to Grade III gliomas. Knockdown of ENST00000413528 in glioma cells inhibited cell proliferation and colony formation abilities, induced the G0/G1 arrest of the cell cycle, and promoted apoptosis. The dual reporter assay and RNA immunoprecipitation assay verified the interaction between ENST00000413528 and miR-593. We also demonstrated that polo-like kinase 1 (PLK1) was regulated by miR-593; PLK1 messenger RNA lacking 3'UTR partially reversed the effects caused by ENST00000413528 knockdown or miR-593 upregulation., Conclusion: lncRNA ENST00000413528 is closely related to the development of glioma via the miR-593-5p/PLK1 pathway., (© 2019 The Authors. CNS Neuroscience & Therapeutics Published by John Wiley & Sons Ltd.)
- Published
- 2019
- Full Text
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44. Joint Association Analysis Identified 18 New Loci for Bone Mineral Density.
- Author
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Pei YF, Liu L, Liu TL, Yang XL, Zhang H, Wei XT, Feng GJ, Hai R, Ran S, and Zhang L
- Subjects
- Animals, Cell Line, Chromosomes, Mammalian genetics, Genetic Association Studies, Genome, Mice, Polycomb-Group Proteins genetics, Polymorphism, Single Nucleotide genetics, Bone Density genetics, Genetic Loci
- Abstract
Bone mineral density (BMD) at various skeletal sites have shared genetic determinants. In the present study, aiming to identify shared loci associated with BMD, we conducted a joint association study of a genomewide association study (GWAS) and a meta-analysis of BMD at different skeletal sites: (i) a single GWAS of heel BMD in 142,487 individuals from the UK Biobank, and (ii) a meta-analysis of 30 GWASs of total body (TB) BMD in 66,628 individuals from the Genetic Factors for Osteoporosis (GEFOS) Consortium. The genetic correlation coefficient of the two traits was estimated to be 0.57. We performed joint association analysis with a recently developed statistical method multi-trait analysis of GWAS (MTAG) to account for trait heterogeneity and sample overlap. The joint association analysis combining samples of up to 209,115 individuals identified 18 novel loci associated with BMD at the genomewide significance level (α = 5.0 × 10
-8 ), explaining an additional 0.43% and 0.60% of heel-BMD and TB-BMD heritability, respectively. The vast majority of the identified lead SNPs or their proxies exerted local expression quantitative trait loci (cis-eQTL) activity. Credible risk variants, defined as those SNPs located within 500 kilobases (kb) of the lead SNP and with p values within two orders of magnitude of the lead SNP, were enriched in transcription factor binding sites (p = 3.58 × 10-4 ) and coding regions (p = 5.71 × 10-4 ). Fifty-six candidate genes were prioritized at these novel loci using multiple sources of information, including several genes being previously reported to play a role in bone biology but not reported in previous GWASs (PPARG, FBN2, DEF6, TNFRSF19, and NFE2L1). One newly identified gene, SCMH1, was shown to upregulate the expression of several bone biomarkers, including alkaline phosphatase (ALP), collagen type 1 (COL-I), osteocalcin (OCN), osteopontin (OPN), and runt-related transcription factor 2 (RUNX2), in mouse osteoblastic MC3T3-E1 cells, highlighting its regulatory role in bone formation. Our results may provide useful candidate genes for future functional investigations. © 2019 American Society for Bone and Mineral Research., (© 2019 American Society for Bone and Mineral Research.)- Published
- 2019
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45. Author Correction: Craniometrics Reveal "Two Layers" of Prehistoric Human Dispersal in Eastern Eurasia.
- Author
-
Matsumura H, Hung HC, Higham C, Zhang C, Yamagata M, Nguyen LC, Li Z, Fan XC, Simanjuntak T, Oktaviana AA, He JN, Chen CY, Pan CK, He G, Sun GP, Huang WJ, Li XW, Wei XT, Domett K, Halcrow S, Nguyen KD, Trinh HH, Bui CH, Nguyen KTK, and Reinecke A
- Abstract
A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has not been fixed in the paper.
- Published
- 2019
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- View/download PDF
46. Proanthocyanidins Alleviates AflatoxinB₁-Induced Oxidative Stress and Apoptosis through Mitochondrial Pathway in the Bursa of Fabricius of Broilers.
- Author
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Rajput SA, Zhang C, Feng Y, Wei XT, Khalil MM, Rajput IR, Baloch DM, Shaukat A, Rajput N, Qamar H, Hassan M, and Qi D
- Subjects
- Animals, Apoptosis drug effects, Apoptosis genetics, Apoptosis Regulatory Proteins genetics, Apoptosis Regulatory Proteins metabolism, Bursa of Fabricius metabolism, Bursa of Fabricius pathology, Chickens, Mitochondria metabolism, Organ Size drug effects, Oxidative Stress drug effects, Tumor Suppressor Protein p53 genetics, Tumor Suppressor Protein p53 metabolism, Aflatoxin B1 toxicity, Antioxidants pharmacology, Bursa of Fabricius drug effects, Mitochondria drug effects, Proanthocyanidins pharmacology
- Abstract
Aflatoxin B₁ (AFB₁) is a serious threat to the poultry industry. Proanthocyanidins (PCs) demonstrates a broad range of biological, pharmacological, therapeutic, and chemoprotective properties. The aim of this study was to investigate the ameliorative effects of PCs against AFB₁-induced histopathology, oxidative stress, and apoptosis via the mitochondrial pathway in the bursa of Fabricius (BF) of broilers. One hundred forty-four one-day old Cobb chicks were randomly assigned into four treatment groups of six replicates (6 birds each replicate) for 28 days. Groups were fed on the following four diets; (1) Basal diet without addition of PCs or AFB₁ (Control); (2) basal diet supplemented with 1 mg/kg AFB₁ from contaminated corn (AFB₁); (3) basal diet supplemented with 250 mg/kg PCs (PCs); and (4) basal diet supplemented with 1 mg/kg AFB₁ + 250 mg/kg PCs (AFB₁+ PCs). The present study results showed that antioxidant enzymes activities of total superoxide dismutase (T-SOD), catalase (CAT), glutathione peroxidase (GSH-Px), and glutathione S-transferase (GST) in AFB₁ treated group were ( p < 0.05) decreased, whereas malondialdehyde (MDA) contents were significantly increased in comparison with the control group. Furthermore, we found that dietary PCs treatment ameliorated AFB₁-induced oxidative stress in the BF through inhibiting the accumulation of MDA content and enhancing the antioxidant enzymes activities (T-SOD, CAT, GSH-Px, and GST). Similarly, PCs markedly enhanced messenger RNA (mRNA) expression of antioxidant genes ( SOD , CAT , GPx1 , and GST ) in comparison with AFB₁ group. Moreover, histological results showed that PCs alleviated AFB₁-induced apoptotic cells in the BF of broilers. In addition, both mRNA and protein expression results manifested that mitochondrial-apoptosis-associated genes ( Bax , caspase-9 , caspase-3 , and p53 and cytochrome c ) showed up-regulation, while ( Bcl-2 ) showed down-regulation in AFB₁ fed group. The supplementation of PCs to AFB₁ diet significantly reversed the mRNA and protein expression of these apoptosis-associated genes, as compared to the AFB₁ group. Our results demonstrated that PCs ameliorated AFB₁-induced oxidative stress by modulating the antioxidant defense system and apoptosis in the BF through mitochondrial pathway in broilers.
- Published
- 2019
- Full Text
- View/download PDF
47. Craniometrics Reveal "Two Layers" of Prehistoric Human Dispersal in Eastern Eurasia.
- Author
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Matsumura H, Hung HC, Higham C, Zhang C, Yamagata M, Nguyen LC, Li Z, Fan XC, Simanjuntak T, Oktaviana AA, He JN, Chen CY, Pan CK, He G, Sun GP, Huang WJ, Li XW, Wei XT, Domett K, Halcrow S, Nguyen KD, Trinh HH, Bui CH, Nguyen KTK, and Reinecke A
- Subjects
- Archaeology, Asia, Eastern, History, Ancient, Humans, Human Migration history, Skull anatomy & histology
- Abstract
This cranio-morphometric study emphasizes a "two-layer model" for eastern Eurasian anatomically modern human (AMH) populations, based on large datasets of 89 population samples including findings directly from ancient archaeological contexts. Results suggest that an initial "first layer" of AMH had related closely to ancestral Andaman, Australian, Papuan, and Jomon groups who likely entered this region via the Southeast Asian landmass, prior to 65-50 kya. A later "second layer" shared strong cranial affinities with Siberians, implying a Northeast Asian source, evidenced by 9 kya in central China and then followed by expansions of descendant groups into Southeast Asia after 4 kya. These two populations shared limited initial exchange, and the second layer grew at a faster rate and in greater numbers, linked with contexts of farming that may have supported increased population densities. Clear dichotomization between the two layers implies a temporally deep divergence of distinct migration routes for AMH through both southern and northern Eurasia.
- Published
- 2019
- Full Text
- View/download PDF
48. Neuroprotective Effect of ZnT3 Knockout on Subarachnoid Hemorrhage.
- Author
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Chen D, Nie ZB, Chi ZH, Wang ZY, Wei XT, and Guan JH
- Abstract
Background: The pathophysiology of early brain injury (EBI) after subarachnoid hemorrhage (SAH) is poorly understood. The present study evaluates the influence of zinc transporter 3 (ZnT3) knockout and the depletion of vesicular zinc on EBI., Methodology: SAH was induced in ZnT3 KO mice by internal carotid artery perforation. The changes in behavior were recorded at 24 hours after SAH. Hematoxylin-eosin, Nissl and TUNEL staining were performed to evaluate neuronal apoptosis. Data from mice with a score of 8-12 in intracerebral bleeding (i.e. moderate SAH), were analyzed., Results: The degree of SAH-induced neuronal injury was directly correlated to the amount of blood lost, which in turn was negatively reflected in their behavior. The Wild Type (WT)-SAH group behaved poorly when compared to the knockout (KO)-SAH mice and their poor neurological score was accompanied by an increase in the number of apoptotic neurons. Conversely, the improvement of behavior in the KO-SAH group was associated with a marked reduction in apoptotic neurons., Conclusions: These results suggest that ZnT3 knockout may have played a vital role in the attenuation of neuronal injury after SAH and that ZnT3 may prove to be a potential therapeutic target for neuroprotection in EBI.
- Published
- 2018
- Full Text
- View/download PDF
49. [Study on teaching capacity building of public health].
- Author
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Liu XY, Zhang JR, Yan L, Chen LY, Xu YJ, Wei XT, Wang ZF, Meng QY, Hao WD, and Wang HJ
- Published
- 2018
- Full Text
- View/download PDF
50. EGF stimulates glioblastoma metastasis by induction of matrix metalloproteinase-9 in an EGFR-dependent mechanism.
- Author
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Chen XC, Wei XT, Guan JH, Shu H, and Chen D
- Abstract
Epidermal growth factor (EGF) and EGF receptor (EGFR) play prominent roles in the metastasis of glioblastoma (GBM). However, the molecular mechanisms for the function of EGF and EGFR in GBM metastasis have not been elucidated. Herein, we demonstrate that coactivation of EGF and EGFR drives tumor metastasis in a matrix metalloproteinase-9 (MMP-9)-dependent manner. Expression levels of EGF, EGFR, and MMP-9 were substantially upregulated in the GBM and edema zones of patients, compared with those of paired unaffected participants. Secretion of EGF and MMP-9 was reduced in the cerebrospinal fluid (CSF) after removing GBM for 2 weeks by operation. To the mechanism, MMP-9 was upregulated by activating EGF and EGFR via PI3K/AKT- and ERK1/2-dependent pathways. Moreover, signal transducer and activator of transcription (STAT) 3 and STAT5 mediated the activation of NF-κB by PI3K/AKT and ERK1/2 pathways. This resulted in transactivation of MMP-9 in GBM. Finally, MMP-9 induction facilitated abnormal proliferation, migration, and invasion of cells, which contributed to GBM metastasis., Competing Interests: CONFLICTS OF INTEREST The authors declare no competing financial interests.
- Published
- 2017
- Full Text
- View/download PDF
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