1. Phenotypic characterization and principal component analyses of indigenous chicken breeds in Indonesia
- Author
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A. P. Z. N. L. Sari, Heru Sasongko, Dwi Nur Happy Hariyono, Fatmawati Mustofa, Dyah Maharani, and Akhmad Fathoni
- Subjects
Veterinary medicine ,animal structures ,Biology ,Quantitative trait locus ,quantitative traits ,SF1-1100 ,Wattle (anatomy) ,0404 agricultural biotechnology ,SF600-1100 ,General Veterinary ,business.industry ,0402 animal and dairy science ,04 agricultural and veterinary sciences ,Phenotypic trait ,phenotypic variation ,040401 food science ,040201 dairy & animal science ,qualitative traits ,Breed ,Animal culture ,Plumage ,Feather ,visual_art ,indigenous chickens ,Principal component analysis ,visual_art.visual_art_medium ,Livestock ,business ,Research Article - Abstract
Background and Aim: Understanding the phenotypic characteristics of indigenous livestock breeds is essential for their utilization and conservation. This study aimed to characterize indigenous chicken breeds in Indonesia based on phenotypic traits. Materials and Methods: Data on eight qualitative and 12 quantitative traits were recorded for 250 chickens from six breeds: Black Kedu, Gaga, Merawang, Nunukan, Pelung, and Sentul. Data were analyzed using descriptive statistics and one-way analysis of variance to test the effect of breed on observed traits. Moreover, principal component analysis (PCA) was conducted separately for each chicken breed. Data on quantitative traits were subjected to Kaiser-Meyer-Olkin, which was computed to test the sampling adequacy and the pattern of correlation among the traits, and Bathlett's tests were used to assess the validity of the factor analysis of each of the datasets and determine whether the partial correlations among traits were small. Results: We found considerable phenotypic variation in both qualitative and quantitative traits among indigenous chicken breeds. Multicolored plumage (96.40%), wild plumage (39.20%), gold feather flick (51.20%), yellow shank (36.80%), single comb (80.80%), red comb (94.80%), red earlobe (77.60%), and orange eyes (61.60%) were the most common features in the indigenous chickens. In addition, breed had a significant effect on all the quantitative traits that were analyzed (p
- Published
- 2021