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Growth of adult chokka squid Loligo reynaudii d’Orbigny was modelled using mantle length and age data derived from samples collected over two years (2003 and 2004) from a single, large cohort of mature and spawning squid. A total of 588 statoliths were examined (310 males, 278 females) from individuals of 71–425 mm mantle length (ML). The maximum size of chokka squid was 425 mm ML for males and 263 mm ML for females. The Francis Growth Model and Linear Growth model were selected for further analysis from six models considered. Males and females attain similar ages, although mantle length-based daily growth rates ranged from 0.75 to 1.02 (0.88 quantile _50) mm/day for males and 0.32–0.45 (0.38 quantile _50) mm/day for females, explaining the sexual dimorphism apparent in the sizes of individuals of this species.

Two sister species of horse mackerel (Trachurus trachurus and T. capensis) are described that are intensively harvested in East Atlantic waters. To address long‐standing uncertainties as to their respective geographical ranges, overlap and intraspecific population structure this study combined genetic (mitochondrial DNA and microsatellite) analysis and targeted sampling of the hitherto understudied West African coast. mtDNA revealed two reciprocally monophyletic clades corresponding to each species with interspecies nuclear differentiation supported by F ST values. The T. trachurus clade was found across the north‐east Atlantic down to Ghana but was absent from Angolan and South African samples. The T. capensis clade was found only in South Africa, Angola and a single Ghanaian individual. This pattern suggests that both species may overlap in the waters around Ghana. The potential for cryptic hybridization and/or indiscriminate harvesting of both species in the region is discussed. For T. capensis mtDNA supports high gene flow across the Benguela upwelling system, which fits with the species' ecology. The data add to evidence of a lack of significant genetic structure throughout the range of T. trachurus though the assumption of demographic panmixia is cautioned against. For both species, resolution of stock recruitment heterogeneity relevant to fishery management, as well as potential hybridization, will require more powerful genomic analyses.

153 pages, 97 figures, 10 tables, 2 appendixes, Recent studies have shown that coastal and shelf cephalopod populations have increased globally over the last six decades. Although cephalopod landings are dominated by the squid fishery, which represents nearly 80% of the worldwide cephalopod catches, octopuses and cuttlefishes represent ∼10% each. Total reported global production of octopuses over the past three decades indicates a relatively steady increase in catch, almost doubling from 179,042 t in 1980 to 355,239 t in 2014. Octopus fisheries are likely to continue to grow in importance and magnitude as many finfish stocks are either fully or over-exploited. More than twenty described octopus species are harvested from some 90 countries worldwide. The current review describes the major octopus fisheries around the globe, providing an overview of species targeted, ecological and biological features of exploited stocks, catches and the key aspects of management, IGG has been supported by the Japan Science and Technology Agency (Grants J130000263 and AS2715164U). RV has been supported by the Spanish Ministry of Education and Culture (Grant PRX17/00090), Spanish Ministry of Science, Innovation and Universities (OCTOSET project, RTI2018-097908-B-I00, MCIU/AEI/FEDER, EU) and by the Direcció General de Pesca i Afers Marítims, Generalitat de Catalunya. FAFA was supported by a predoctoral fellowship of the MINECO (BES-2013-063551) and an Irish Research Council - Government of Ireland Postdoctoral Fellowship (Ref. GOIPD/2019/460)

Climate change is projected to cause significant reductions in global fisheries catch during the 21st Century. Yet, little is understood of climate change impacts on tropical fisheries, which support many livelihoods, as is the case in the Western Indian Ocean region (WIO). Here, we focus on two central WIO countries ― Kenya and Tanzania ― and run a multi-species fish model (Size Spectrum Dynamic Bio-climate Envelope Model; SS-DBEM) for 43 species of commercial and artisanal importance, to investigate the effects of climate change. We include both national Exclusive Economic Zones (EEZs) as domains. The model was forced by data from a biogeochemical model (NEMO-MEDUSA), run under the high emissions scenario Representative Concentration Pathway (RCP) 8.5, until the end of the 21st century. Impacts of fisheries and climate change were investigated by running SS-DBEM under five scenarios of fishing pressures to predict a range of possible future scenarios. Fishing pressure was represented as the Maximum Sustainable Yield (MSY), expressed as MSY0, MSY1, MSY2, MSY3 and MSY4 representing fishing mortality of 0, 1, 2, 3 and 4 times MSY, respectively. Large reductions in average fish biomass were projected over the 21st Century, with median reductions of fish species biomass of 63–76% and 56–69% for the Kenyan and Tanzanian EEZs respectively across the fishing scenarios. Tunas were particularly impacted by future climate change, with the six modelled species exhibiting biomass reductions of at least 70% in both EEZs for all fishing scenarios during the 21st Century. Reductions in fish biomass were much more severe during the second half of the 21st Century, highlighting the benefits to tropical fisheries of global action on climate change.

The marine fisheries sector is one of the most important income sectors in South Africa and plays an important role in food security for small-scale and subsistence fishers. Climate-driven impacts have resulted in distribution shifts and declines in abundance of important fisheries targets, with negative consequences to the users dependent on these resources. The sustainability of the sector depends on its readiness to adapt to climate change. The inclusion of climate change impacts and adaptation in fisheries management documents in South Africa is essential to ensure adequate climate adaptation responses are implemented at the short- and long-term. This study aims to 1) determine if the relevant fisheries national management documents address climate change and adaptation, 2) determine if the relevant national climate change documents address climate change and adaptation in the fisheries sector and 3) evaluate the extent to which fisheries management documents address climate change and adaptation. A content analysis of fisheries management and climate change documents was carried out to determine if they incorporated information on climate change impacts and adaptation and marine fisheries respectively. Fisheries management documents were then screened against nine pre-determined criteria (or themes) based on climate change adaptation to determine the level of inclusion of best practice for climate change adaptation. Results indicate that climate change impacts and adaptation are rarely incorporated in the main fisheries management documents, except for the Climate Change Adaptation and Mitigation Plan for the agriculture, fisheries and forestry sectors. However, this document is still waiting to be adopted. The only direct reference identified in all the fisheries documents that supports climate change adaptation was ‘conservation and sustainable management of biodiversity’. With regards to indirect references to climate change adaptation, ‘equity,’ ‘participatory management,’ and ‘capacity building’ were most frequently incorporated in fisheries management documents. There is a need to explicitly incorporate information on climate change impacts and adaptation in South African fisheries management documents and increase the human and financial capacity at national institutions to ensure that the fisheries sector can adequately adapt to climate change.

In polygamous species, the mode of sperm storage in females influences evolution of sperm quantitative and qualitative traits because it provides the arena for sperm competition, cryptic female choice and fertilization processes. In this study, we compared ejaculate traits of two squid species, Heterololigo bleekeri and Loligo reynaudii. Both species show dimorphic sperm traits associated with alternative reproductive tactics where consort and sneaker males transfer sperm to different storage sites within a female (on the oviduct and near the mouth, respectively). Due to differences in reproductive behaviours and sperm placement, sperm competition risk is expected to be higher in sneakers than in consorts of both species and higher overall in L. reynaudii. Our results demonstrate that the instantaneous number of released sperm is adjusted to the expected sperm competition risk via an elaborate sperm package. Consort sperm are similar in size; however, sneaker sperm have a significantly longer flagellum in H. bleekeri than in L. reynaudii, most likely due to intra-tactic conflicts associated with sperm storage conditions. From consideration of the different mating tactics, we suggest that while levels of sperm competition determine quantitative traits, sperm quality traits are determined more by the mode of sperm storage and fertilization.

The UN General Assembly has made a unanimous decision to start negotiations to establish an international, legally-binding instrument for the conservation and sustainable use of marine biological diversity within Areas Beyond National Jurisdiction (ABNJ). However, there has of yet been little discussion on the importance of this move to the ecosystem services provided by coastal zones in their downstream zone of influence. Here, we identify the ecological connectivity between ABNJ and coastal zones as critically important in the negotiation process and apply several approaches to identify some priority areas for protection from the perspective of coastal populations of Least Developed Countries (LDCs). Initially, we review the scientific evidence that demonstrates ecological connectivity between ABNJ and the coastal zones with a focus on the LDCs. We then use ocean modelling to develop a number of metrics and spatial maps that serve to quantify the connectivity of the ABNJ to the coastal zone. We find that the level of exposure to the ABNJ influences varies strongly between countries. Similarly, not all areas of the ABNJ are equal in their impacts on the coastline. Using this method, we identify the areas of the ABNJ that are in the most urgent need of protection on the grounds of the strength of their potential downstream impacts on the coastal populations of LDCs. We argue that indirect negative impacts of the ABNJ fishing, industrialisation and pollution, communicated via oceanographic, cultural and ecological connectivity to the coastal waters of the developing countries should be of concern.

Marine ecosystems are expected to be increasingly affected by climate change, impacting their physical and biogeochemical environment. Changes in primary production, temperatures and hence species distribution, may lead to critical consequences for fishery exploitation. Therefore, future projections are essential to develop sustainable strategies and climate change adaptation plans for fisheries, and fishery-dependent societies. In this study, we focus on the Agulhas Bank, a broad extension of the continental shelf of the South African coast, along which flows the western boundary Agulhas Current. The Agulhas Bank is known for being biologically productive and is an important nursery ground for many commercially exploited fish species, including the chokka squid fishery, a vital source of income for many people in the Eastern Cape Province. Squid catches manifest strong interannual fluctuations, at times causing fishery crashes. Additional impacts due to climate change will have significant socio-economic consequences for this all-important fishery. To investigate future variations of the physical and biogeochemical environment on the Agulhas Bank, we used the global ocean model NEMO-MEDUSA, forced by the high emissions scenario RCP8.5. Our simulations show a significant increase in sea surface temperature and bottom temperature, but limited changes in primary production. Projections highlight an increase in current velocity on the Agulhas Bank throughout the course of this century, induced by an onshore shift of the Agulhas current. This current shift may pose a threat to squid recruitment success as a large fraction of squid paralarvae may be removed from their shelf feeding grounds and lost to the greater ocean via the Agulhas current. The results further show that planktonic food for the paralarvae is less likely to become the main limiting factor in the future, while increasing temperatures may affect growth rates and spawning success.

While acoustic telemetry (AT) has become the dominant technique for understanding patterns of fish migration, catch rate (CR) and conventional tagging (CT) techniques still play a major role, particularly in developing countries. Understanding the potential biases of each technique is important for fish migration research. We compared these techniques for understanding the migration patterns of two coastal fishery species (Argyrosomus coronus and Lichia amia) in southern Angola. Seasonal fluctuations in the catchability of A. coronus led to incorrect conclusions about migration patterns using CR and CT and we recognised “cryptic residency” during the austral summer. This was attributed to a fine-scale offshore movement that was detected using AT. The AT data provided evidence for partial migration in L. amia, and while supported by the CR and CT data, these did not provide direct evidence for this intraspecific behavioural diversity. Range test results indicated that the optimal placement of nearshore AT receivers is essential, especially when migratory routes proceed along noisy, nearshore pathways. These limitations should be addressed during the design phase of fish migration experiments.

For the countries bordering the tropical Western Indian Ocean (TWIO), living marine resources are vital for food security. However, this region has largely escaped the attention of studies investigating potential impacts of future climate change on the marine environment. Understanding how marine ecosystems in coastal East Africa may respond to various climatic stressors is vital for the development of conservation and other ocean management policies that can help to adapt to climate change impacts on natural and associated human systems. Here, we use a high-resolution (1/4°) ocean model, run under a high emission scenario (RCP 8.5) until the end of the 21st century, to identify key regionally important climate change stressors over the East African Coastal Current (EACC) that flows along the coasts of Kenya and Tanzania. We also discuss these stressors in the context of projections from lower resolution CMIP5 models. Our results indicate that the main drivers of dynamics and the associated ecosystem response in the TWIO are different between the two monsoon seasons. Our high resolution model projects weakening of the Northeast monsoon (December–February) winds and slight strengthening of the Southeast monsoon (May–September) winds throughout the course of the 21st century, consistent with CMIP5 models. The projected shallower mixed layers and weaker upwelling during the Northeast Monsoon considerably reduce the availability of surface nutrients and primary production. Meanwhile, primary production during the Southeast monsoon is projected to be relatively stable until the end of the century. In parallel, a widespread warming of up to 5 °C is projected year-round with extreme events such as marine heatwaves becoming more intense and prolonged, with the first year-long event projected to occur as early as the 2030s. This extreme warming will have significant consequences for both marine ecosystems and the coastal populations dependent on these marine resources. These region-specific stressors highlight the importance of dynamic ocean features such as the upwelling systems associated with key ocean currents. This indicates the need to develop and implement a regional system that monitors the anomalous behaviour of such regionally important features. Additionally, this study draws attention to the importance of investment in decadal prediction methods, including high resolution modelling, that can provide information at time and space scales that are more directly relevant to regional management and policy making.

Under the impact of natural and anthropogenic climate variability, upwelling systems are known to change their properties leading to associated regime shifts in marine ecosystems. These often impact commercial fisheries and societies dependent on them. In a region where in situ hydrographic and biological marine data are scarce, this study uses a combination of remote sensing and ocean modelling to show how a stable seasonal upwelling off the Kenyan coast shifted into the territorial waters of neighboring Tanzania under the influence of the unique 1997/ 98 El Niño and positive Indian Ocean Dipole event. The formation of an anticyclonic gyre adjacent to the Kenyan/ Tanzanian coast led to a reorganization of the surface currents and caused the southward migration of the Somali–Zanzibar confluence zone and is attributed to anomalous wind stress curl over the central Indian Ocean. This caused the lowest observed chlorophyll-a over the North Kenya banks (Kenya), while it reached its historical maximum off Dar Es Salaam (Tanzanian waters). We demonstrate that this situation is specific to the 1997/ 98 El Niño when compared with other the super El-Niño events of 1972,73, 1982–83 and 2015–16. Despite the lack of available fishery data in the region, the local ecosystem changes that the shift of this upwelling may have caused are discussed based on the literature. The likely negative impacts on local fish stocks in Kenya, affecting fishers’ livelihoods and food security, and the temporary increase in pelagic fishery species’ productivity in Tanzania are highlighted. Finally, we discuss how satellite observations may assist fisheries management bodies to anticipate low productivity periods, and mitigate their potentially negative economic impacts.