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3. Temporal transcriptomic analysis of the Listeria monocytogenes EGD-e σB regulon

Author

Billion Andre, Kuenne Carsten T, Haas Stefan, Brors Benedikt, Wagner Sandra, Volk Ute, Machata Silke, Chatterjee Som S, Hossain Hamid, Hain Torsten, Otten Sonja, Pane-Farre Jan, Engelmann Susanne, and Chakraborty Trinad

Subjects
Microbiology, QR1-502
Abstract

Abstract Background The opportunistic food-borne gram-positive pathogen Listeria monocytogenes can exist as a free-living microorganism in the environment and grow in the cytoplasm of vertebrate and invertebrate cells following infection. The general stress response, controlled by the alternative sigma factor, σB, has an important role for bacterial survival both in the environment and during infection. We used quantitative real-time PCR analysis and immuno-blot analysis to examine σB expression during growth of L. monocytogenes EGD-e. Whole genome-based transcriptional profiling was used to identify σB-dependent genes at different growth phases. Results We detected 105 σB-positively regulated genes and 111 genes which appeared to be under negative control of σB and validated 36 σB-positively regulated genes in vivo using a reporter gene fusion system. Conclusion Genes comprising the σB regulon encode solute transporters, novel cell-wall proteins, universal stress proteins, transcriptional regulators and include those involved in osmoregulation, carbon metabolism, ribosome- and envelope-function, as well as virulence and niche-specific survival genes such as those involved in bile resistance and exclusion. Ten of the σB-positively regulated genes of L. monocytogenes are absent in L. innocua. A total of 75 σB-positively regulated listerial genes had homologs in B. subtilis, but only 33 have been previously described as being σB-regulated in B. subtilis even though both species share a highly conserved σB-dependent consensus sequence. A low overlap of genes may reflects adaptation of these bacteria to their respective environmental conditions.

Published
2008
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7. Fasting Urinary Osmolality, CKD Progression, and Mortality: A Prospective Observational Study

Author

Livrozet, Marine, Letavernier, Emmanuel, Ronco, Pierre, Fessi, Hafedh, Vidal-Petiot, Emmanuelle, Daugas, Eric, du Halgouet, Caroline, de La Faille, Renaud, Maruani, Gerard, Vallet, Marion, Nicolet-Barousse, Laurence, Karras, Alexandre, Jacquot, Christian, Tabibzadeh, Nahid, Wagner, Sandra, Metzger, Marie, Flamant, Martin, Houillier, Pascal, Boffa, Jean-Jacques, Vrtovsnik, Francois, Thervet, Eric, Stengel, Bénédicte, and Haymann, Jean-Philippe

Published
2019
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16. Associations of childhood adiposity with adult intima–media thickness and inflammation: a 20-year longitudinal population-based cohort

Author

Fujikawa, Tomona, Kobayashi, Masatake, Wagner, Sandra, Duarte, Kevin, Scherdel, Pauline, Heude, Barbara, Dupont, Vincent, Bozec, Erwan, Bresso, Emmanuel, Zannad, Faiez, Rossignol, Patrick, Girerd, Nicolas, Défaillance Cardiovasculaire Aiguë et Chronique (DCAC), Centre Hospitalier Régional Universitaire de Nancy (CHRU Nancy)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Lorraine (UL), Centre d'investigation clinique plurithématique Pierre Drouin [Nancy] (CIC-P), Centre d'investigation clinique [Nancy] (CIC), Centre Hospitalier Régional Universitaire de Nancy (CHRU Nancy)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Lorraine (UL)-Centre Hospitalier Régional Universitaire de Nancy (CHRU Nancy)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Lorraine (UL), Cardiovascular and Renal Clinical Trialists [Vandoeuvre-les-Nancy] (INI-CRCT), Institut Lorrain du Coeur et des Vaisseaux Louis Mathieu [Nancy], French-Clinical Research Infrastructure Network - F-CRIN [Paris] (Cardiovascular & Renal Clinical Trialists - CRCT ), Centre de Recherche Épidémiologie et Statistique Sorbonne Paris Cité (CRESS (U1153 / UMR_A_1125 / UMR_S_1153)), Conservatoire National des Arts et Métiers [CNAM] (CNAM), HESAM Université - Communauté d'universités et d'établissements Hautes écoles Sorbonne Arts et métiers université (HESAM)-HESAM Université - Communauté d'universités et d'établissements Hautes écoles Sorbonne Arts et métiers université (HESAM)-Université Sorbonne Paris Cité (USPC)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Cité (UPCité)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Equipe 6 : ORCHAD - Origines précoces de la santé du développement de l'enfant (CRESS - U1153), HESAM Université - Communauté d'universités et d'établissements Hautes écoles Sorbonne Arts et métiers université (HESAM)-HESAM Université - Communauté d'universités et d'établissements Hautes écoles Sorbonne Arts et métiers université (HESAM)-Université Sorbonne Paris Cité (USPC)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Cité (UPCité)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Conservatoire National des Arts et Métiers [CNAM] (CNAM), Centre Hospitalier Universitaire de Reims (CHU Reims), ANR-15-RHUS-0004,FIGHT-HF,Combattre l'insuffisance cardiaque(2015), ANR-15-IDEX-0004,LUE,Isite LUE(2015), European Project, European Project: 305507,EC:FP7:HEALTH,FP7-HEALTH-2012-INNOVATION-1,HOMAGE(2013), and European Project: ERA-CVD/0001/2016,MINOTAUR

Subjects
inflammation, Physiology, [SDV]Life Sciences [q-bio], childhood adiposity, Internal Medicine, biomarkers, Cardiology and Cardiovascular Medicine, carotid intima–media thickness
Abstract

International audience; Background: The associations between childhood adiposity and adult increased carotid intima-media thickness (cIMT) have been well established, which might be corroborated by the association between adiposity in children and inflammation in adults. However, longitudinal data regarding biological pathways associated with childhood adiposity are lacking.Methods: The current study included participants from the STANISLAS cohort who had adiposity measurements at age 5-18 years [ N = 519, mean (SD) age, 13.0 (2.9) years; 46.4% male], and who were measured with cIMT, vascular-related and metabolic-related proteins at a median follow-up of 19 ± 2 years. BMI, waist-to-height ratio and waist circumference were converted to age-specific and sex-specific z -scores.Results: A minority of children were overweight/obese (16.2% overweight-BMI z -score >1; 1.3% obesity- z -score >2). Higher BMI, waist-height ratio and waist circumference in children were significantly associated with greater adult cIMT in univariable analysis, although not after adjusting for C-reactive protein. These associations were more pronounced in those with consistently high adiposity status from childhood to middle adulthood. Participants with higher adiposity during childhood (BMI or waist-height ratio) had higher levels of insulin-like growth factor-binding protein-1, protein-2, matrix metalloproteinase-3, osteopontin, hemoglobin and C-reactive protein in adulthood. Network analysis showed that IL-6, insulin-like growth factor-1 and fibronectin were the key proteins associated with childhood adiposity.Conclusion: In a population-based cohort followed for 20 years, higher BMI or waist-to-height ratio in childhood was significantly associated with greater cIMT and enhanced levels of proteins reflective of inflammation, supporting the importance of inflammation as progressive atherosclerosis in childhood adiposity.

Published
2022
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25. Les déterminants sociodémographiques et culturels de l’initiation de l’allaitement en France au XXIe siècle

Author

Kersuzan, Claire, primary, Gojard, Séverine, additional, Tichit, Christine, additional, Thierry, Xavier, additional, Wagner, Sandra, additional, Charles, Marie-Aline, additional, Lioret, Sandrine, additional, De Lauzon-Guillain, Blandine, additional, Nicklaus, Sophie, additional, Humeau, Pierig, additional, and Geay, Bertrand, additional

Published
2019
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26. Birth weight and subclinical cardiovascular and renal damage in a population-based study (the STANISLAS cohort study)

Author

Lopez-Sublet, Marilucy, primary, Merkling, Thomas, additional, Girerd, Nicolas, additional, Xhaard, Constance, additional, Flahault, Adrien, additional, Bozec, Erwan, additional, Leroy, Celine, additional, Fujikawa, Tomona, additional, Vaag, Allan Arthur, additional, Mebazaa, Alexandre, additional, Kistorp, Caroline Michaela, additional, Heude, Barbara, additional, Boivin, Jean Marc, additional, Zannad, Faiez, additional, Wagner, Sandra, additional, and Rossignol, Patrick, additional

Published
2023
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27. Supplementary Figures 4-7 from Sleeping Beauty Insertional Mutagenesis Reveals Important Genetic Drivers of Central Nervous System Embryonal Tumors

Author

Beckmann, Pauline J., primary, Larson, Jon D., primary, Larsson, Alex T., primary, Ostergaard, Jason P., primary, Wagner, Sandra, primary, Rahrmann, Eric P., primary, Shamsan, Ghaidan A., primary, Otto, George M., primary, Williams, Rory L., primary, Wang, Jun, primary, Lee, Catherine, primary, Tschida, Barbara R., primary, Das, Paramita, primary, Dubuc, Adrian M., primary, Moriarity, Branden S., primary, Picard, Daniel, primary, Wu, Xiaochong, primary, Rodriguez, Fausto J., primary, Rosemarie, Quincy, primary, Krebs, Ryan D., primary, Molan, Amy M., primary, Demer, Addison M., primary, Frees, Michelle M., primary, Rizzardi, Anthony E., primary, Schmechel, Stephen C., primary, Eberhart, Charles G., primary, Jenkins, Robert B., primary, Wechsler-Reya, Robert J., primary, Odde, David J., primary, Huang, Annie, primary, Taylor, Michael D., primary, Sarver, Aaron L., primary, and Largaespada, David A., primary

Published
2023
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28. Supplementary Tables S7-18 from Sleeping Beauty Insertional Mutagenesis in Mice Identifies Drivers of Steatosis-Associated Hepatic Tumors

Author

Tschida, Barbara R., primary, Temiz, Nuri A., primary, Kuka, Timothy P., primary, Lee, Lindsey A., primary, Riordan, Jesse D., primary, Tierrablanca, Carlos A., primary, Hullsiek, Robert, primary, Wagner, Sandra, primary, Hudson, Wendy A., primary, Linden, Michael A., primary, Amin, Khalid, primary, Beckmann, Pauline J., primary, Heuer, Rachel A., primary, Sarver, Aaron L., primary, Yang, Ju Dong, primary, Roberts, Lewis R., primary, Nadeau, Joseph H., primary, Dupuy, Adam J., primary, Keng, Vincent W., primary, and Largaespada, David A., primary

Published
2023
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29. Supplementary Tables S1-6 from Sleeping Beauty Insertional Mutagenesis in Mice Identifies Drivers of Steatosis-Associated Hepatic Tumors

Author

Tschida, Barbara R., primary, Temiz, Nuri A., primary, Kuka, Timothy P., primary, Lee, Lindsey A., primary, Riordan, Jesse D., primary, Tierrablanca, Carlos A., primary, Hullsiek, Robert, primary, Wagner, Sandra, primary, Hudson, Wendy A., primary, Linden, Michael A., primary, Amin, Khalid, primary, Beckmann, Pauline J., primary, Heuer, Rachel A., primary, Sarver, Aaron L., primary, Yang, Ju Dong, primary, Roberts, Lewis R., primary, Nadeau, Joseph H., primary, Dupuy, Adam J., primary, Keng, Vincent W., primary, and Largaespada, David A., primary

Published
2023
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30. Data from Sleeping Beauty Insertional Mutagenesis Reveals Important Genetic Drivers of Central Nervous System Embryonal Tumors

Author

Beckmann, Pauline J., primary, Larson, Jon D., primary, Larsson, Alex T., primary, Ostergaard, Jason P., primary, Wagner, Sandra, primary, Rahrmann, Eric P., primary, Shamsan, Ghaidan A., primary, Otto, George M., primary, Williams, Rory L., primary, Wang, Jun, primary, Lee, Catherine, primary, Tschida, Barbara R., primary, Das, Paramita, primary, Dubuc, Adrian M., primary, Moriarity, Branden S., primary, Picard, Daniel, primary, Wu, Xiaochong, primary, Rodriguez, Fausto J., primary, Rosemarie, Quincy, primary, Krebs, Ryan D., primary, Molan, Amy M., primary, Demer, Addison M., primary, Frees, Michelle M., primary, Rizzardi, Anthony E., primary, Schmechel, Stephen C., primary, Eberhart, Charles G., primary, Jenkins, Robert B., primary, Wechsler-Reya, Robert J., primary, Odde, David J., primary, Huang, Annie, primary, Taylor, Michael D., primary, Sarver, Aaron L., primary, and Largaespada, David A., primary

Published
2023
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31. Data from Sleeping Beauty Insertional Mutagenesis in Mice Identifies Drivers of Steatosis-Associated Hepatic Tumors

Author

Tschida, Barbara R., primary, Temiz, Nuri A., primary, Kuka, Timothy P., primary, Lee, Lindsey A., primary, Riordan, Jesse D., primary, Tierrablanca, Carlos A., primary, Hullsiek, Robert, primary, Wagner, Sandra, primary, Hudson, Wendy A., primary, Linden, Michael A., primary, Amin, Khalid, primary, Beckmann, Pauline J., primary, Heuer, Rachel A., primary, Sarver, Aaron L., primary, Yang, Ju Dong, primary, Roberts, Lewis R., primary, Nadeau, Joseph H., primary, Dupuy, Adam J., primary, Keng, Vincent W., primary, and Largaespada, David A., primary

Published
2023
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32. Supplementary Figures S1 from Sleeping Beauty Insertional Mutagenesis in Mice Identifies Drivers of Steatosis-Associated Hepatic Tumors

Author

Tschida, Barbara R., primary, Temiz, Nuri A., primary, Kuka, Timothy P., primary, Lee, Lindsey A., primary, Riordan, Jesse D., primary, Tierrablanca, Carlos A., primary, Hullsiek, Robert, primary, Wagner, Sandra, primary, Hudson, Wendy A., primary, Linden, Michael A., primary, Amin, Khalid, primary, Beckmann, Pauline J., primary, Heuer, Rachel A., primary, Sarver, Aaron L., primary, Yang, Ju Dong, primary, Roberts, Lewis R., primary, Nadeau, Joseph H., primary, Dupuy, Adam J., primary, Keng, Vincent W., primary, and Largaespada, David A., primary

Published
2023
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33. Supplementary Figures S2-4 from Sleeping Beauty Insertional Mutagenesis in Mice Identifies Drivers of Steatosis-Associated Hepatic Tumors

Author

Tschida, Barbara R., primary, Temiz, Nuri A., primary, Kuka, Timothy P., primary, Lee, Lindsey A., primary, Riordan, Jesse D., primary, Tierrablanca, Carlos A., primary, Hullsiek, Robert, primary, Wagner, Sandra, primary, Hudson, Wendy A., primary, Linden, Michael A., primary, Amin, Khalid, primary, Beckmann, Pauline J., primary, Heuer, Rachel A., primary, Sarver, Aaron L., primary, Yang, Ju Dong, primary, Roberts, Lewis R., primary, Nadeau, Joseph H., primary, Dupuy, Adam J., primary, Keng, Vincent W., primary, and Largaespada, David A., primary

Published
2023
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34. Supplementary Figures S11-13 from Sleeping Beauty Insertional Mutagenesis in Mice Identifies Drivers of Steatosis-Associated Hepatic Tumors

Author

Tschida, Barbara R., primary, Temiz, Nuri A., primary, Kuka, Timothy P., primary, Lee, Lindsey A., primary, Riordan, Jesse D., primary, Tierrablanca, Carlos A., primary, Hullsiek, Robert, primary, Wagner, Sandra, primary, Hudson, Wendy A., primary, Linden, Michael A., primary, Amin, Khalid, primary, Beckmann, Pauline J., primary, Heuer, Rachel A., primary, Sarver, Aaron L., primary, Yang, Ju Dong, primary, Roberts, Lewis R., primary, Nadeau, Joseph H., primary, Dupuy, Adam J., primary, Keng, Vincent W., primary, and Largaespada, David A., primary

Published
2023
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35. Supplementary Figures S5-7 from Sleeping Beauty Insertional Mutagenesis in Mice Identifies Drivers of Steatosis-Associated Hepatic Tumors

Author

Tschida, Barbara R., primary, Temiz, Nuri A., primary, Kuka, Timothy P., primary, Lee, Lindsey A., primary, Riordan, Jesse D., primary, Tierrablanca, Carlos A., primary, Hullsiek, Robert, primary, Wagner, Sandra, primary, Hudson, Wendy A., primary, Linden, Michael A., primary, Amin, Khalid, primary, Beckmann, Pauline J., primary, Heuer, Rachel A., primary, Sarver, Aaron L., primary, Yang, Ju Dong, primary, Roberts, Lewis R., primary, Nadeau, Joseph H., primary, Dupuy, Adam J., primary, Keng, Vincent W., primary, and Largaespada, David A., primary

Published
2023
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36. Supplementary Tables 1-9 from Sleeping Beauty Insertional Mutagenesis Reveals Important Genetic Drivers of Central Nervous System Embryonal Tumors

Author

Beckmann, Pauline J., primary, Larson, Jon D., primary, Larsson, Alex T., primary, Ostergaard, Jason P., primary, Wagner, Sandra, primary, Rahrmann, Eric P., primary, Shamsan, Ghaidan A., primary, Otto, George M., primary, Williams, Rory L., primary, Wang, Jun, primary, Lee, Catherine, primary, Tschida, Barbara R., primary, Das, Paramita, primary, Dubuc, Adrian M., primary, Moriarity, Branden S., primary, Picard, Daniel, primary, Wu, Xiaochong, primary, Rodriguez, Fausto J., primary, Rosemarie, Quincy, primary, Krebs, Ryan D., primary, Molan, Amy M., primary, Demer, Addison M., primary, Frees, Michelle M., primary, Rizzardi, Anthony E., primary, Schmechel, Stephen C., primary, Eberhart, Charles G., primary, Jenkins, Robert B., primary, Wechsler-Reya, Robert J., primary, Odde, David J., primary, Huang, Annie, primary, Taylor, Michael D., primary, Sarver, Aaron L., primary, and Largaespada, David A., primary

Published
2023
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37. Supplementary Figures 1-3 from Sleeping Beauty Insertional Mutagenesis Reveals Important Genetic Drivers of Central Nervous System Embryonal Tumors

Author

Beckmann, Pauline J., primary, Larson, Jon D., primary, Larsson, Alex T., primary, Ostergaard, Jason P., primary, Wagner, Sandra, primary, Rahrmann, Eric P., primary, Shamsan, Ghaidan A., primary, Otto, George M., primary, Williams, Rory L., primary, Wang, Jun, primary, Lee, Catherine, primary, Tschida, Barbara R., primary, Das, Paramita, primary, Dubuc, Adrian M., primary, Moriarity, Branden S., primary, Picard, Daniel, primary, Wu, Xiaochong, primary, Rodriguez, Fausto J., primary, Rosemarie, Quincy, primary, Krebs, Ryan D., primary, Molan, Amy M., primary, Demer, Addison M., primary, Frees, Michelle M., primary, Rizzardi, Anthony E., primary, Schmechel, Stephen C., primary, Eberhart, Charles G., primary, Jenkins, Robert B., primary, Wechsler-Reya, Robert J., primary, Odde, David J., primary, Huang, Annie, primary, Taylor, Michael D., primary, Sarver, Aaron L., primary, and Largaespada, David A., primary

Published
2023
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38. Supplementary Figures 9-10 from Sleeping Beauty Insertional Mutagenesis in Mice Identifies Drivers of Steatosis-Associated Hepatic Tumors

Author

Tschida, Barbara R., primary, Temiz, Nuri A., primary, Kuka, Timothy P., primary, Lee, Lindsey A., primary, Riordan, Jesse D., primary, Tierrablanca, Carlos A., primary, Hullsiek, Robert, primary, Wagner, Sandra, primary, Hudson, Wendy A., primary, Linden, Michael A., primary, Amin, Khalid, primary, Beckmann, Pauline J., primary, Heuer, Rachel A., primary, Sarver, Aaron L., primary, Yang, Ju Dong, primary, Roberts, Lewis R., primary, Nadeau, Joseph H., primary, Dupuy, Adam J., primary, Keng, Vincent W., primary, and Largaespada, David A., primary

Published
2023
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46. Evaluation of Anti-PF4 Positivity and Platelet Activation after COVID-19 Vaccination with Ad26.COV2.S in Brazil

Author

Bokel, Joanna, primary, Mendes-de-Almeida, Daniela P., additional, Martins-Gonçalves, Remy, additional, Grinsztejn, Eduarda, additional, Hoagland, Brenda, additional, Wagner, Sandra, additional, Geraldo, Kim Mattos, additional, Coutinho, Sandro Nazer, additional, Georg, Ingebourg, additional, Oliveira de Mello, Maria Helena, additional, Souza, Flávia dos Santos, additional, Vizzoni, Alexandre G., additional, Veloso, Valdiléa, additional, Bozza, Patrícia T., additional, and Grinsztejn, Beatriz, additional

Published
2022
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50. Monetäre Dienste in der Transformation: Fazit und Ausblick (Thesen)

Author

Hüning, Hasko, Nickel, Hildegard Maria, Frey, Michael, Grüner, Silke, Peinl, Iris, Stock, Catrin, Struck-Möbbeck, Olaf, Wagner, Sandra, Bertram, Hans, editor, Nickel, Hildegard Maria, editor, Niedermayer, Oskar, editor, Trommsdorff, Gisela, editor, Hüning, Hasko, Frey, Michael, Grüner, Silke, Peinl, Iris, Stock, Catrin, Struck-Möbbeck, Olaf, and Wagner, Sandra

Published
1998
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