14 results on '"Varsha Jha"'
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2. Designing an Efficient Consortium for Improved Crop Productivity using Phosphate Stress Adapted Bacteria with Multiple Growth-Promoting Attributes
- Author
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Varsha Jha, Hemant Purohit, and Nishant A. Dafale
- Subjects
Earth and Planetary Sciences (miscellaneous) ,Environmental Chemistry ,Microbiology ,General Environmental Science - Published
- 2022
- Full Text
- View/download PDF
3. Review of: 'Women's misogyny in modern culture, with a mythological allusion to Draupadi'
- Author
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Varsha Jha (Singh)
- Published
- 2022
- Full Text
- View/download PDF
4. Study of indiscriminate distribution of restrained antimicrobial resistome of different environmental niches
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Nishant A. Dafale, Hemant J. Purohit, Varsha Jha, Sakina Bombaywala, and Abhay Bajaj
- Subjects
Veterinary medicine ,education.field_of_study ,Tetracycline ,medicine.drug_class ,Health, Toxicology and Mutagenesis ,Population ,Antibiotics ,General Medicine ,010501 environmental sciences ,Biology ,01 natural sciences ,Pollution ,Resistome ,Antibiotic resistance ,Metagenomics ,medicine ,Environmental Chemistry ,Efflux ,education ,Effluent ,0105 earth and related environmental sciences ,medicine.drug - Abstract
Prophylactic usage and high persistent nature of several antibiotics have put selective pressure on the native microbial population that led to the emergence, propagation, and persistence of antibiotic resistance in nature. The surveillance of antibiotic resistome pattern and identification of points of intervention throughout the different environmental habitats will help to break the flow of antibiotic resistance from environmental bacteria to human pathogens. The present study compares the occurrence, diversity, and abundance of ARGs in industrial sludge, wetland sludge, and sediment sample contaminated with pharmaceutical discharge. Metagenomes were mined for the presence of ARGs against the ResFinder 3.2 database using BLASTn program. Pharmaceutical sample (2.52%) showed high degree of ARG abundance and richness as compared with ETP sludge (2.28%) and wetland sludge samples (1.29%). The modern resistome pattern represented by critically important resistance genes against tetracycline (tetA, tetC, tetW, tetT, and tetS/M) and quinolone (qnrS, qnrVC, and qnrD) was identified in pharmaceutical sediment sample. However, effluent treatment plant (ETP) sludge sample showed abundance of multidrug efflux pumps indicating the presence of primitive resistome profile. In conclusion, the indiscriminate distribution pattern of antibiotic resistance genes in three selected environmental sites suggests enrichment and distribution of environmental niche–driven resistance. The study also suggests effluent discharge site from pharmaceutical industries and ETPs as pivotal points of intervention for the mitigation of antibiotic resistance.
- Published
- 2020
- Full Text
- View/download PDF
5. Differential expression and cross-correlation between global regulator and pho regulon genes involved in decision-making under phosphate stress
- Author
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Varsha, Jha, Nishant A, Dafale, and Hemant J, Purohit
- Abstract
The differential gene expression under phosphate stress conditions leads to cross-talk between the global regulator, pho regulon, and metabolic genes. Promoter activity analysis of the selected 23 genes reveals the dynamic nature of real-time gene expression under different phosphate conditions. The expression profiles of the global regulator (rpoD, soxR, soxS, arcB, and fur), pho regulon (phoH, phoR, phoB, and ugpB), and metabolic genes (sdh, pfkA, ldh) varied significantly on phosphate level variation. Under stress conditions, soxR switches expression partners and co-expresses with rpoS instead of soxS. The partner-switching behavior of the genes under a challenging environment represents the intelligence of functional execution and ensures cell survival. The dynamic expression profile of the selected genes applies a time-lagged correlation to provide insight into the differential gene interaction between time-shifted expression profiles. Under different phosphate conditions, the minimum spanning tree graph revealed a different clustering pattern of selected genes depending on the computed distance and its proximity to other promoters.
- Published
- 2022
6. Differential colonization and functioning of microbial community in response to phosphate levels
- Author
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Varsha Jha, Sakina Bombaywala, Hemant Purohit, and Nishant A. Dafale
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Environmental Engineering ,Microbiota ,Proteobacteria ,Metagenome ,General Medicine ,Metagenomics ,Management, Monitoring, Policy and Law ,Waste Management and Disposal ,Soil Microbiology ,Phosphates - Abstract
Microbes play a major role in phosphate cycling and regulate its availability in various environments. The metagenomic study highlights the microbial community divergence and interplay of phosphate metabolism functional genes in response to phosphate rich (100 mgL
- Published
- 2022
7. Revealing the potential of Klebsiella pneumoniae PVN-1 for plant beneficial attributes by genome sequencing and analysis
- Author
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Hemant J. Purohit, Nishant A. Dafale, and Varsha Jha
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biology ,Klebsiella pneumoniae ,Pseudogene ,food and beverages ,Environmental Science (miscellaneous) ,Ribosomal RNA ,biology.organism_classification ,Agricultural and Biological Sciences (miscellaneous) ,Genome ,DNA sequencing ,chemistry.chemical_compound ,Enterobactin ,chemistry ,Biochemistry ,Genome Reports ,Gene ,GC-content ,Biotechnology - Abstract
Genome sequencing of Klebsiella pneumoniae PVN-1, isolated from effluent treatment plant (ETP), generates a 5.064 Mb draft genome with 57.6% GC content. The draft genome assembled into 19 contigs comprises 4783 proteins, 3 rRNA, 44 tRNA, 8 other RNA, 4911 genes, and 73 pseudogenes. Genome information revealed the presence of phosphate metabolism/solubilizing, potassium solubilizing, auxin production, and other plant benefiting attributes like enterobactin and pyrroloquinoline quinone biosynthesis genes. Presence of gcd and pqq genes in K. pneumoniae PVN-1 genome validates the inorganic phosphate solubilizing potential (528.5 mg/L). Pangenome analysis identified a unique 5ʹ-Nucleotidase that further assists in enhanced phosphate acquisition. Additionally, the genetic potential for complete benzoate, catechol, and phenylacetate degradation with stress response and heavy metal (Cu, Zn, Ni, Co) resistance was identified in K. pneumoniae PVN-1. Functioning of annotated plant benefiting genes validates by the metabolic activity of auxin production (7.40 µg/mL), nitrogen fixation, catalase activity, potassium solubilization (solubilization index—3.47), and protease activity (proteolytic index—2.27). In conclusion, the K. pneumoniae PVN-1 genome has numerous beneficial qualities that can be employed to enhance plant growth as well as for phytoremediation. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s13205-021-03020-2.
- Published
- 2021
- Full Text
- View/download PDF
8. Safety Monitoring Of Sewage Workers Using IOT and Machine Learning
- Author
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Shashi Pal, Aayush Sonkhla, Varsha Jha, Mohd Saquib Faraz, and Nishthaa Jain
- Subjects
Sanitation ,Application programming interface ,Computer science ,business.industry ,Reliability (computer networking) ,Cloud computing ,Machine learning ,computer.software_genre ,Work (electrical) ,Artificial intelligence ,business ,computer ,Real-time operating system ,Wireless sensor network ,Safety monitoring - Abstract
This Sewage environment monitoring system using Internet of Things along with the fusion of Machine Learning has been proposed as a solution to help the sewer workers who put their lives in jeopardy, and ensure minimal health risk. Many sanitation workers had suffered serious health concerns at an early age and have lost their lives due to being continuously exposed to toxic surroundings of drainage, Different kinds of work have been done to detect, maintain and manage the drainage system but very few have been done for protecting the lives of people who do it. The objective of this monitoring system is to obtain an effective low-cost and flexible solution for checking and keeping an update using sensors and collecting and analyzing data using the Internet of Things and Machine Learning. This system is based on the perusal of real-time data provided by the wireless sensor network which generates huge amount of data; this data is then processed by the microcontroller and depicted on the cloud. The data obtained on the cloud is then used by Machine Learning Model for further systematic analysis making smart use of this massive volume of data in order to predict the condition of the worker with considerable reliability and accuracy.
- Published
- 2021
- Full Text
- View/download PDF
9. Study of indiscriminate distribution of restrained antimicrobial resistome of different environmental niches
- Author
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Sakina, Bombaywala, Nishant A, Dafale, Varsha, Jha, Abhay, Bajaj, and Hemant J, Purohit
- Subjects
Bacteria ,Sewage ,Genes, Bacterial ,Humans ,Drug Resistance, Microbial ,Tetracycline ,Anti-Bacterial Agents - Abstract
Prophylactic usage and high persistent nature of several antibiotics have put selective pressure on the native microbial population that led to the emergence, propagation, and persistence of antibiotic resistance in nature. The surveillance of antibiotic resistome pattern and identification of points of intervention throughout the different environmental habitats will help to break the flow of antibiotic resistance from environmental bacteria to human pathogens. The present study compares the occurrence, diversity, and abundance of ARGs in industrial sludge, wetland sludge, and sediment sample contaminated with pharmaceutical discharge. Metagenomes were mined for the presence of ARGs against the ResFinder 3.2 database using BLASTn program. Pharmaceutical sample (2.52%) showed high degree of ARG abundance and richness as compared with ETP sludge (2.28%) and wetland sludge samples (1.29%). The modern resistome pattern represented by critically important resistance genes against tetracycline (tetA, tetC, tetW, tetT, and tetS/M) and quinolone (qnrS, qnrVC, and qnrD) was identified in pharmaceutical sediment sample. However, effluent treatment plant (ETP) sludge sample showed abundance of multidrug efflux pumps indicating the presence of primitive resistome profile. In conclusion, the indiscriminate distribution pattern of antibiotic resistance genes in three selected environmental sites suggests enrichment and distribution of environmental niche-driven resistance. The study also suggests effluent discharge site from pharmaceutical industries and ETPs as pivotal points of intervention for the mitigation of antibiotic resistance.
- Published
- 2020
10. Reading a retelling: Mahabharata in the graphic novel form
- Author
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Varsha Jha and Mini Chandran
- Subjects
Literature ,Literature and Literary Theory ,Visual Arts and Performing Arts ,business.industry ,media_common.quotation_subject ,05 social sciences ,050801 communication & media studies ,Art ,0508 media and communications ,050903 gender studies ,Reading (process) ,0509 other social sciences ,business ,media_common - Abstract
This article explores the literary and the extra-literary modes of reading a graphic-novel retelling of the Mahabharata. Applying the theories of Scott McCloud and Neil Cohn, this article attempts ...
- Published
- 2017
- Full Text
- View/download PDF
11. Exploring the rearrangement of sensory intelligence in proteobacteria: insight of Pho regulon
- Author
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Hemant J. Purohit, Varsha Jha, Hitesh Tikariha, and Nishant A. Dafale
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inorganic chemicals ,0301 basic medicine ,Gene Transfer, Horizontal ,Physiology ,Applied Microbiology and Biotechnology ,Genome ,Regulon ,Phosphates ,03 medical and health sciences ,Bacterial Proteins ,Phylogenetics ,Gene Duplication ,RNA, Ribosomal, 16S ,Proteobacteria ,Gene ,Phylogeny ,Genetics ,Adenosine Triphosphatases ,Multiple sequence alignment ,Binding Sites ,biology ,Base Sequence ,General Medicine ,Gene Expression Regulation, Bacterial ,Phosphate-Binding Proteins ,biology.organism_classification ,030104 developmental biology ,Multigene Family ,Periplasmic Binding Proteins ,Horizontal gene transfer ,ATP-Binding Cassette Transporters ,Carrier Proteins ,Function (biology) ,Genome, Bacterial ,Biotechnology ,Multilocus Sequence Typing - Abstract
Pho regulon is a highly evolved and conserved mechanism across the microbes to fulfil their phosphate need. In this study, 52 proteobacteria genomes were analyzed for the presence of phosphorus acquisition genes, their pattern of arrangement and copy numbers. The diverse genetic architecture of the Pho regulon genes indicates the evolutionary challenge of nutrient limitation, particularly phosphorus, faced by bacteria in their environment. The incongruence between the Pho regulon proteins phylogeny and species phylogeny along with the presence of additional copies of pstS and pstB genes, having cross similarity with other genera, suggest the possibility of horizontal gene transfer event. The substitution rate analysis and multiple sequence alignment of the Pho regulon proteins were analyzed to gain additional insight into the evolution of the Pho regulon system. This comprehensive study confirms that genes perform the regulatory function (phoBR) were vertically inherited, whereas interestingly, genes whose product involved in direct interaction with the environment (pstS) acquired by horizontal gene transfer. The substantial amino acid substitutions in PstS most likely contribute to the successful adaptation of bacteria in different ecological condition dealing with different phosphorus availability. The findings decipher the intelligence of the bacteria which enable them to carry out the targeted alteration of genes to cope up with the environmental condition.
- Published
- 2018
12. Regulatory rewiring through global gene regulations by PhoB and alarmone (p)ppGpp under various stress conditions
- Author
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Varsha Jha, Nishant A. Dafale, and Hemant J. Purohit
- Subjects
Nitrogen ,Cell Plasticity ,Plant Development ,Metabolic network ,Computational biology ,Biology ,Bacterial Physiological Phenomena ,Microbiology ,Phosphates ,Soil ,03 medical and health sciences ,Bacterial Proteins ,Stress, Physiological ,Homeostasis ,Gene Regulatory Networks ,Gene ,030304 developmental biology ,0303 health sciences ,Bacteria ,030306 microbiology ,Guanosine Pentaphosphate ,Molecular Sequence Annotation ,Gene Expression Regulation, Bacterial ,Plants ,biology.organism_classification ,Phosphate solubilizing bacteria ,Crosstalk (biology) ,Response regulator ,Stress conditions ,Metabolic Networks and Pathways ,Alarmone - Abstract
The phosphorus availability in soil ranged from
- Published
- 2019
- Full Text
- View/download PDF
13. Seqestration Options for Phosphorus in Wastewater
- Author
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Hemant J. Purohit, Varsha Jha, and Sampada Puranik
- Subjects
0301 basic medicine ,Aquatic ecosystem ,Phosphorus ,chemistry.chemical_element ,010501 environmental sciences ,Phosphate ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,Nutrient ,Wastewater ,chemistry ,Environmental protection ,Environmental science ,Sewage treatment ,Eutrophication ,Effluent ,0105 earth and related environmental sciences - Abstract
Inefficient wastewater treatment introduces huge amount of nutrients mainly phosphorus and nitrogen to the natural waterbodies. Excessive phosphate in the water leads to the growth of algae or eutrophication. One-third of the aquatic ecology has been destroyed by eutrophication worldwide including China, Japan, Europe, South Asia and South Africa. Artificial eutrophication affects the water ecology around the world by decreasing the quality standards of water and alters the ecosystem structure and function. Phosphorus is known to be a limiting factor, and it is crucial to remove the phosphate from the effluent prior to exoneration into waterbodies.
- Published
- 2017
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- View/download PDF
14. Enhanced Inherent Safety Intervention Framework
- Author
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Dzulkarnain Zaini, Mohsin Pasha, and Varsha Jha
- Subjects
consequent impacts ,021110 strategic, defence & security studies ,Engineering ,business.industry ,Process (engineering) ,Inherent safety ,0211 other engineering and technologies ,Process design silmulator ,02 engineering and technology ,General Medicine ,Benchmarking ,Reliability engineering ,Intervention (law) ,020401 chemical engineering ,Work (electrical) ,0204 chemical engineering ,Process simulation ,explosion ,Risk assessment ,business ,Reliability (statistics) ,Engineering(all) - Abstract
The inherent safety intervention framework (ISIF) was developed to integrate the inherent safety level assessment methods to the process simulation tools. This framework is considered as a major breakthrough in the development of inherently safe design. In this framework, the best process route is selected by using the Process Route Index (PRI), and the inherent safety level of all process streams is estimated by using Process Stream Index (PSI). Moreover, the worst stream is identified on the basis of the highest magnitude of PSI. However, benchmarking of the worst stream is difficult to predict by using the original ISIF. In this work, a benchmarking criteria for a worst process stream is established through risk assessment. This reform could potentially improve the reliability of the original ISIF.
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- View/download PDF
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