19 results on '"Vamadevan V"'
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2. Starch: Starch Architecture and Structure
- Author
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Vamadevan, V., primary and Liu, Q., additional
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- 2016
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3. Wildlife Week 2022
- Author
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Kannan CS Warrier, Selvaraj, Vigneswaran, T. Vamadevan. V. Thangavel, and Warrier, Rekha
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- 2022
- Full Text
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4. International Day for the Preservation of Ozone Layer 2022
- Author
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Kannan CS Warrier, Selvaraj, Vigneswaran, T. Vamadevan. V. Thangavel, and Warrier, Rekha
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- 2022
- Full Text
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5. International Day of Forests - 2016
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Kannan CS Warrier, V.N. Mutharaiyan, T. Vamadevan. V. Thangavel, and Warrier, Rekha
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- 2016
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6. On the Architecture of Starch Granules Revealed by Iodine Binding and Lintnerization. Part 2: Molecular Structure of Lintnerized Starches.
- Author
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Bertoft E, Annor G, Vamadevan V, and Lin AH
- Abstract
This investigation validated iodine binding in combination with lintnerization for studying the structural nature of the amorphous areas in starch granules. Lintners of four iodine vapor-stained and non-stained amylose-containing starches and their waxy counterparts were analyzed by high-performance anion-exchange chromatography (HPAEC). The composition of the lintners was strongly affected by the absence of amylose in barley and potato starch but not in maize and cassava starch. Iodine-stained waxy lintners possessed increased number of long B2 chains. β-Limit dextrins of the lintners were very variable in composition. Iodine inclusion complexes washed out from the granular residues in the lintners (mostly from amylose-containing barley and maize starches) were also analyzed. Acid-soluble complexes from both amylose-containing and waxy starches possessed a lot of material with a degree of polymerization (DP) around 60 and a periodicity in size of DP 8-12. Such long chains were only minor components in water-soluble complexes of amylose-containing barley and maize starch lintners, and they lacked the size periodicity. Models of the principal structure of the acid and water-soluble complexes are suggested. It is concluded that acid hydrolysis of iodine-stained starch granules is a useful tool in structural analyses of the molecular composition of amorphous parts of starch granules., (© 2024 Wiley Periodicals LLC.)
- Published
- 2024
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7. On the architecture of starch granules revealed by iodine vapor binding and lintnerization. Part 1: Microscopic examinations.
- Author
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Bertoft E, Annor G, Vamadevan V, and Lin AH
- Abstract
Structural nature of glucan chains in the amorphous part of granular starch was examined by iodine vapor treatment and lintnerization. Four iodine-stained amylose-containing normal starches and their waxy counterparts were examined under a microscope before, during, and after lintnerization. The presence of amylose retarded the lintnerization rate. The degree of retardation correlated with the structural type of the amylopectin component, suggesting that potato amylopectin (type 4 structure) interacts with amylose in the granules, whereas in barley granules (type 1 structure) the interaction is very weak. The inclusion complexes with iodine were not degraded by the acid treatment. Therefore, the iodine-glucan chain complex formation could be used to study the structural nature of the flexible, amorphous parts of the starch granules. Indeed, at the end of lintnerization, when 20%-30% of the granules remained, substantial amounts of blue-stained complexes were washed out from the granules especially from amylose-containing barley and maize starch, but also from both normal and waxy cassava and potato starch. The complexation with iodine did not affect the rate of lintnerization. This suggested that single helical structures were present during lintnerization also in the absence of iodine and this conformation was the reason for the acid resistance., (© 2024 Wiley Periodicals LLC.)
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- 2024
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8. Ubiquitin-assisted phase separation of dishevelled-2 promotes Wnt signalling.
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Vamadevan V, Chaudhary N, and Maddika S
- Subjects
- Humans, Dishevelled Proteins metabolism, Ubiquitin metabolism, Ubiquitination, Phosphoproteins genetics, Phosphoproteins metabolism, Ubiquitin-Protein Ligases metabolism, Wnt Signaling Pathway, beta Catenin metabolism
- Abstract
Dishvelled-2 (Dvl2) is an essential component of Wnt pathway, which controls several cell fate decisions during development, such as proliferation, survival and differentiation. Dvl2 forms higher-order protein assemblies in the cell that are critical for relaying the signal from upstream Wnt ligand-frizzled receptor binding to downstream effector β-catenin activation. However, the precise molecular nature and contribution of Dvl2 protein assemblies during Wnt signalling is unknown. Here, we show that Dvl2 forms protein condensates driven by liquid-liquid phase separation. An intrinsically disordered region (IDR) at the N-terminus is essential for Dvl2 phase separation. Importantly, we identified the HECT-E3 ligase WWP2 as an essential driver of Dvl2 phase separation in vitro and in cells. We demonstrated that ubiquitylation of Dvl2 through K63 linkage by WWP2 is required for formation of Dvl2 condensates. Phase-separated Dvl2 activates Wnt signaling by sequestering the components of destruction complex and thus relieving β-catenin. Together, our results reveal a ubiquitylation-dependent liquid-liquid phase separation as a new process through which Dvl2 forms condensates, which is necessary for transduction of Wnt signalling. This article has an associated First Person interview with the first author of the paper., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2022. Published by The Company of Biologists Ltd.)
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- 2022
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9. Process evaluation protocol for a cluster randomised trial of a complex, nurse-led intervention to improve hypertension management in India.
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Srinivasapura Venkateshmurthy N, Mc Namara K, Koorts H, Mohan S, S Ajay V, Jindal D, Malipeddi BR, Roy A, Tandon N, Prabhakaran D, Worsley T, Maddison R, and O'Reilly S
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- Blood Pressure, Disease Management, Female, Humans, India, Male, Community Health Services methods, Hypertension nursing, Hypertension therapy, Process Assessment, Health Care methods
- Abstract
Introduction: India has high prevalence of hypertension but low awareness, treatment and control rate. A cluster randomised trial entitled 'm-Power Heart Project' is being implemented to test the effectiveness of a nurse care coordinator (NCC) led complex intervention to address uncontrolled hypertension in the community health centres (CHCs). The trial's process evaluation will assess the fidelity and quality of implementation, clarify the causal mechanisms and identify the contextual factors associated with variation in the outcomes. The trial will use a theory-based mixed-methods process evaluation, guided by the Consolidated Framework for Implementation Research., Methods and Analysis: The process evaluation will be conducted in the CHCs of Visakhapatnam (southern India). The key stakeholders involved in the intervention development and implementation will be included as participants. In-depth interviews will be conducted with intervention developers, doctors, NCCs and health department officials and focus groups with patients and their caregivers. NCC training will be evaluated using Kirkpatrick's model for training evaluation. Key process evaluation indicators (number of patients recruited and retained; concordance between the treatment plans generated by the electronic decision support system and treatment prescribed by the doctor and so on) will be assessed. Fidelity will be assessed using Borrelli et al 's framework. Qualitative data will be analysed using the template analysis technique. Quantitative data will be summarised as medians (IQR), means (SD) and proportions as appropriate. Mixed-methods analysis will be conducted to assess if the variation in the mean reduction of systolic blood pressure between the intervention CHCs is influenced by patient satisfaction, training outcome, attitude of doctors, patients and NCCs about the intervention, process indicators etc. ETHICS AND DISSEMINATION: Ethical approval for this study was obtained from the ethics committees at Public Health Foundation of India and Deakin University. Findings will be disseminated via peer-reviewed publications, national and international conference presentations., Trial Registration Number: NCT03164317; Pre-results., Competing Interests: Competing interests: None declared., (© Author(s) (or their employer(s)) 2018. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ.)
- Published
- 2019
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10. Influence of diurnal photosynthetic activity on the morphology, structure, and thermal properties of normal and waxy barley starch.
- Author
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Goldstein A, Annor G, Vamadevan V, Tetlow I, Kirkensgaard JJ, Mortensen K, Blennow A, Hebelstrup KH, and Bertoft E
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- Hordeum physiology, Hordeum radiation effects, Light, Plant Proteins chemistry, Plant Proteins metabolism, Circadian Rhythm radiation effects, Hordeum chemistry, Hordeum metabolism, Photosynthesis radiation effects, Starch chemistry, Temperature, Waxes chemistry
- Abstract
This study investigated the influence of diurnal photosynthetic activity on the morphology, molecular composition, crystallinity, and gelatinization properties of normal barley starch (NBS) and waxy barley starch (WBS) granules from plants cultivated in a greenhouse under normal diurnal (16h light) or constant light photosynthetic conditions. Growth rings were observed in all starch samples regardless of lighting conditions. The size distribution of whole and debranched WBS analyzed by gel-permeation chromatography did not appear to be influenced by the different lighting regimes, however, a greater relative crystallinity measured by wide-angle X-ray scattering and greater crystalline quality as judged by differential scanning calorimetry was observed under the diurnal lighting regime. NBS cultivated under the diurnal photosynthetic lighting regime displayed lower amylose content (18.7%), and shorter amylose chains than its counterpart grown under constant light. Although the relative crystallinity of NBS was not influenced by lighting conditions, lower onset, peak, and completion gelatinization temperatures were observed in diurnally grown NBS compared to constant light conditions. It is concluded that normal barley starch is less influenced by the diurnal photosynthetic lighting regime than amylose-free barley starch suggesting a role of amylose to prevent structural disorder and increase starch granule robustness against environmental cues., (Copyright © 2017 Elsevier B.V. All rights reserved.)
- Published
- 2017
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11. Extrusion of Rice, Bean and Corn Starches: Extrudate Structure and Molecular Changes in Amylose and Amylopectin.
- Author
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Vanier NL, Vamadevan V, Bruni GP, Ferreira CD, Pinto VZ, Seetharaman K, Zavareze ED, Elias MC, and Berrios JJ
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- Food Analysis, Gelatin chemistry, Molecular Structure, Amylopectin analysis, Amylose analysis, Fabaceae chemistry, Oryza chemistry, Starch chemistry, Zea mays chemistry
- Abstract
The objective of this study was to evaluate the effects of starch source and amylose content on the expansion ratio, density, and texture of expanded extrudates, as well as to investigate the structural and molecular changes that occur in starch granules as a function of extrusion. The starches employed were rice starches (8%, 20%, and 32% amylose), carioca bean starch (35% amylose), and Hylon V
® corn starch (55% amylose). The extrudates from rice starches containing 20% and 32% amylose exhibited the highest expansion ratio, while, extrudates from Hylon V® corn starch containing 55% amylose exhibited the lowest expansion ratio. The hardness values of the extrudates with 55% amylose were twice those of the extrudates with 20%, 32%, and 35% amylose. An additional finding was that although the amylopectin promoted the expansion of the gelatinized starch matrix, it failed to strengthen and sustain the walls of the extrudate bubbles during expansion., (© 2016 Institute of Food Technologists®.)- Published
- 2016
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12. Thermal properties of barley starch and its relation to starch characteristics.
- Author
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Källman A, Vamadevan V, Bertoft E, Koch K, Seetharaman K, Åman P, and Andersson R
- Subjects
- Amylopectin chemistry, Calorimetry, Differential Scanning, Starch isolation & purification, Temperature, alpha-Amylases chemistry, Hordeum chemistry, Starch chemistry
- Abstract
Amylopectin fine structure and starch gelatinization and retrogradation were studied in 10 different barley cultivars/breeding lines. Clusters and building blocks were isolated from the amylopectin by α-amylase from Bacillus amyloliquefaciens and their structure was characterized. Gelatinization was studied at a starch:water ratio of 1:3, and retrogradation was studied on gelatinized starch at starch:water ratio of 1:2, by differential scanning calorimetry. Three barley cultivars/breeding lines possessed the amo1 mutation, and they all had a lower molar proportion of chains of DP ≥38 and more of large building blocks. The amo1 mutation also resulted in a higher gelatinization temperature and a broader temperature interval during gelatinization. Overall, small clusters with a dense structure resulted in a higher gelatinization temperature while retrogradation was promoted by short chains in the amylopectin and many large building blocks., (Copyright © 2015 Elsevier B.V. All rights reserved.)
- Published
- 2015
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13. Comparative analysis of cell morphology in sputum samples homogenized with dithiothreitol, N-acetyl-L cysteine, Cytorich(®) red preservative and in cellblock preparations to enhance the sensitivity of sputum cytology for the diagnosis of lung cancer.
- Author
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Saraswathy Veena V, Sara George P, Jayasree K, and Sujathan K
- Subjects
- Acetylcysteine chemistry, Dithiothreitol chemistry, Early Detection of Cancer, Humans, Lung Neoplasms classification, Lung Neoplasms pathology, Preservatives, Pharmaceutical chemistry, Sensitivity and Specificity, Tumor Cells, Cultured, Cytodiagnosis methods, DNA, Neoplasm isolation & purification, Immunohistochemistry methods, Lung pathology, Lung Neoplasms diagnosis, Sputum cytology
- Abstract
Background: Lung cancer claims highest rate of cancer related mortality worldwide, mainly due to late diagnosis and distant metastasis. Sputum cytology is the simplest, non-invasive and cost effective technique but it has low sensitivity due to lack of robust processing methods to retrieve all the diagnostic materials clogged in mucus, inflammatory exudates and blood., Methods: This study have compared conventional pick and smear method of sputum processing with samples prepared by homogenization methods using N-acetyl-l-cysteine, Dithiothreitol (DTT), CytoRich red solution and cell blocks (CBs) with respect to screening time, quality of staining, cellularity, smear background, nuclear and cytoplasmic morphology preservation, and diagnostic efficacy. The significance of CB prepared from homogenised samples for immunocytochemistry, protein extraction, Genomic DNA and RNA extraction were also evaluated on a cohort 3,185 samples. The significance of the morphological features in each of the techniques was statistically analysed using SPSS 11 software., Results: The smear background clarity, staining quality and diagnostic efficacy of samples processed in red solution was found to be superior to the conventional method (P < 0.0001), where as samples homogenized in DTT showed a better cellularity (P < 0.0001). CBs prepared from samples homogenized in red solution were found to be very significant (P < 0.0001) in increasing the diagnostic efficacy compared to other two methods. Immunocytochemistry and DNA extraction were found possible in CBs as well as from the cell suspension. A combined analysis of smears and CBs found to improve the sensitivity of sputum cytology., Conclusion: The study suggests homogenization of sputum in CytoRich ® red solution and cellblock preparations routinely for all samples to improve the sensitivity of sputum cytology. IHC and DNA extraction can be performed in sputum samples suggesting the role of sputum samples for ancillary techniques., (© 2015 Wiley Periodicals, Inc.)
- Published
- 2015
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14. Hydrothermal treatment and iodine binding provide insights into the organization of glucan chains within the semi-crystalline lamellae of corn starch granules.
- Author
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Vamadevan V, Hoover R, Bertoft E, and Seetharaman K
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- Calorimetry, Differential Scanning, Chemical Fractionation, Chromatography, Gel, Crystallization, Gels chemistry, Spectrum Analysis, Starch ultrastructure, X-Ray Diffraction, Iodine chemistry, Starch chemistry, Temperature, Water chemistry, Zea mays chemistry
- Abstract
The importance of glucan chains that pass through both the amorphous and crystalline lamellae (tie chains) in the organization of corn starch granules was studied using heat-moisture treatment (HMT), annealing (ANN), and iodine binding. Molecular structural analysis showed that hylon starches (HV, HVII, and HVIII) contained higher proportion of intermediate glucan chains (HVIII > HVII > HV) than normal corn (CN) starch. Wide angle X-ray scattering revealed that on HMT, the extent of polymorphic transition in hylon starches decreased with increasing proportion of intermediate and long chains. Iodine treated hylon starches exhibited increased order in the V-type polymorphism as evidenced by the intense peak at 20° 2θ and the strong reflection intensity at 7.5° 2θ and the extent of the change depended on the type of hylon starch. DSC results showed that the gelatinization enthalpy of CN and waxy corn starch (CW) remained unchanged after ANN. However, hylon starches showed a significant increase in enthalpy with more distinct endotherms after ANN. It can be concluded that tie chains influence the organization of crystalline lamellae in amylose extender mutant starches., (© 2014 Wiley Periodicals, Inc.)
- Published
- 2014
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15. Structural and physical properties of granule stabilized starch obtained by branching enzyme treatment.
- Author
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Jensen SL, Zhu F, Vamadevan V, Bertoft E, Seetharaman K, Bandsholm O, and Blennow A
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- Calorimetry, Differential Scanning, Gels, Solanum tuberosum chemistry, X-Ray Diffraction, 1,4-alpha-Glucan Branching Enzyme chemistry, Amylopectin chemistry, Amylose chemistry, Cytoplasmic Granules chemistry, Starch chemistry
- Abstract
Chemical cross-linking of starch is an important modification used in the industry for granule stabilization. It has been demonstrated that treatment with branching enzyme (BE) can stabilize the granular structure of starch and such treatment thereby provides a potential clean alternative for chemical modification. This study demonstrates that such BE-assisted stabilization of starch granules led to partial protection from BE catalysis of both amylose (AM) and amylopectin (AP) in their native state as assessed by triiodide complexation, X-ray diffractometry (XRD) and differential scanning calorimetry (DSC). The granule stabilizing effects were inversely linked to hydration of the starch granules, which was increased by the presence of starch-phosphate esters and suppressed by extreme substrate concentration. The data support that the granule stabilization is due to the intermolecular transglycosylation occurring in the initial stages of the reaction prior to AM-AP phase separation. The enzyme activity needed to obtain granule stabilization was therefore dependent on the hydration capability of the starch used., (Copyright © 2013 Elsevier Ltd. All rights reserved.)
- Published
- 2013
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16. Impact on molecular organization of amylopectin in starch granules upon annealing.
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Vamadevan V, Bertoft E, Soldatov DV, and Seetharaman K
- Subjects
- Time Factors, Transition Temperature, Amylopectin chemistry
- Abstract
This study investigated the influence of the internal structure of amylopectin on annealing (3h, 24h) of starches from four different types of amylopectin (Bertoft, Koch, & Aman, 2012; Bertoft, Piyachomkwan, Chatakanonda, & Sriroth, 2008). Regardless of the starch source and incubation time, annealing significantly increased the onset gelatinization temperature (To) and narrowed and deepened the amylopectin endotherm. However, the extent of the change in the melting temperature (Tm) and the enthalpy of gelatinization (ΔH) differed among the types. In terms of the To and Tm, starches from type 1 (oat, rye, barley, and waxy barley) showed the most significant response to annealing. The Tm of starches belonging to type 2 (waxy maize, rice, waxy rice, and sago) remained unchanged after 3h of annealing. Type 1 and type 2 starches with the lowest gelatinization temperatures showed the greatest increase in melting temperature after annealing. However, type 3 (tapioca, mung bean, and arrowroot) and type 4 (potato, waxy potato, canna, and yam) starches were not in line with these observations. Instead, starches from type 3 and type 4 showed a pronounced increase in the ΔH. The inter-block chain length (IB-CL) (distance between tightly branched units within a cluster) correlated positively (r=0.93, p<0.01) with the change in enthalpy after 24h of annealing. These data indicate that a short IB-CL affects the optimum registration of double helices within the crystalline lamellae. The relationship between the gelatinization parameters before and after annealing suggests that type 1 and 2 starches might possess a high number of unpacked double helices (type 1>type 2) compared to other types. Longer IB-CLs, which facilitate the parallel packing of splayed double helices, and the lengthening of double helices likely increased the ΔH in type 3 and type 4 starches. It is concluded that annealing can be used as a probe for visualizing the organization of glucan chains (alignment of double helices/degree of perfection) within crystalline lamellae., (Copyright © 2013 Elsevier Ltd. All rights reserved.)
- Published
- 2013
- Full Text
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17. On the importance of organization of glucan chains on thermal properties of starch.
- Author
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Vamadevan V, Bertoft E, and Seetharaman K
- Subjects
- Gels, Amylopectin chemistry, Temperature
- Abstract
The relationship between the internal structure of amylopectin from diverse plants and thermal properties of the starch granules has been investigated. Correlations were found between structural parameters, such as number of building blocks in clusters, interblock chain length and length of external chains, and gelatinization parameters. Onset gelatinization temperature negatively correlated with number of building blocks (r=-0.952, p<0.01) and positively correlated with inter-block chain length (r=0.905, p<0.01). Enthalpy of gelatinization positively correlated with external chain length (r=0.854, p<0.01). These data showed that the internal structure is predictive of trends in thermal properties. A model is proposed based on the backbone concept of amylopectin structure that explains how the organization of chains in the semicrystalline lamellae of starch granules relates to the thermal properties., (Copyright © 2012 Elsevier Ltd. All rights reserved.)
- Published
- 2013
- Full Text
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18. Role of estimation of arterial blood gases in the management of stridor.
- Author
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Panduranga Kamath M, Hegde MC, Sreedharan S, Bhojwani K, Vamadevan V, and Vishwas KV
- Abstract
Aim: We studied the epidemiology and etiology of stridor in our patients along with the role of arterial blood gas (ABG) analysis in their management. We also reviewed their prognostic indices and the clinical outcomes., Materials and Methods: It was a prospective study in a tertiary referral hospital in which 72 patients presenting with stridor, were independently evaluated by 3 different clinicians and clinically classified into mild, moderate and severe. Based on ABG values (pH, PO2, PCO2), we defined 3 groups of patients viz, those in respiratory failure, impending respiratory failure and those with no evidence of failure. Treatment was directed at the cause of stridor. Clinical outcomes were assessed and results classified as resolved, improved, stable and death., Results: Out of 72 patients, kappa coefficient of agreement between the 3 observers were found to be 0.014, indicating poor interobserver reliability for the working clinical classification. However, ABG analysis indicated otherwise, with 6 patients in respiratory failure, 19 progressing to impending failure. Hence we complied by the more objective ABG analysis in planning management. Laryngomalacia in children and hypopharyngeal malignancies in adults were found to be the most common causes of stridor in our study. As compared to other conditions, laryngomalacia in children had a poorer outcome (p = 0.001)., Conclusion: Early detection of impending respiratory failure was instrumental in achieving better clinical outcomes in our patients presenting with stridor. Thus we inferred that ABG analysis is a valuable tool in the effective management of stridor.
- Published
- 2010
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19. Clinical outcomes of case management in a tertiary psychiatric hospital.
- Author
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Thambyrajah V, Hendriks M, and Mahendran R
- Subjects
- Adult, Female, Humans, Length of Stay statistics & numerical data, Male, Mental Disorders epidemiology, Mental Disorders therapy, Treatment Outcome, Case Management, Hospitals, Psychiatric, Mental Disorders rehabilitation
- Abstract
The purpose of this study was to determine the clinical outcomes of inpatients on an acute psychiatric ward in a large tertiary psychiatric hospital who received a broker model of case management. The clinical outcomes monitored were readmission rates and scores on the Clinical Global Impression (CGI) scale. The study found a significant reduction in readmission rates and hospital lengths of stay and improved CGI scores for patients who received case management.
- Published
- 2007
- Full Text
- View/download PDF
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