898 results on '"Vallese A"'
Search Results
2. Malignant peripheral nerve sheath tumor (MPNST) and MPNST-like entities are defined by a specific DNA methylation profile in pediatric and juvenile population
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Patrizi, Sara, Miele, Evelina, Falcone, Lorenza, Vallese, Silvia, Rossi, Sabrina, Barresi, Sabina, Giovannoni, Isabella, Pedace, Lucia, Nardini, Claudia, Masier, Ilaria, Abballe, Luana, Cacchione, Antonella, Russo, Ida, Di Giannatale, Angela, Di Ruscio, Valentina, Salgado, Claudia Maria, Mastronuzzi, Angela, Ciolfi, Andrea, Tartaglia, Marco, Milano, Giuseppe Maria, Locatelli, Franco, and Alaggio, Rita
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- 2024
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3. Neutrophil to lymphocyte ratio predicts bowel ischemia in non-strangulated adhesive small bowel occlusions: a retrospective analysis from an acute care surgical service
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Alberto Friziero, Eugenia Rosso, Irene Sole Zuin, Lorenzo Vallese, Simone Serafini, Alessandra Amico, Valeria Valli, Chiara Da Re, Nicola Baldan, Michele Valmasoni, Gianfranco Da Dalt, and Cosimo Sperti
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ASBO ,Bowel ischemia ,Neutrophil-lymphocyte ratio ,Acute care surgery ,Surgery ,RD1-811 - Abstract
Abstract Background Adhesive small bowel obstruction (ASBO) is a leading cause of hospitalization in emergency surgery. The occurrence of bowel ischemia significantly increases the morbidity and mortality rates associated with this condition. Current clinical, biochemical and radiological parameters have poor predictive value for bowel ischemia. This study is designed to ascertain predictive elements for the progression to bowel ischemia in patients diagnosed with non-strangulated ASBO who are initially managed through conservative therapeutic approaches. Methods The study was based on the previously collected medical records of 128 patients admitted to the Department of Acute Care Surgery of Padua General Hospital, from August 2020 to April 2023, with a diagnosis of non-strangulated adhesive small bowel obstruction, who were then operated for failure of conservative treatment. The presence or absence of bowel ischemia was used to distinguish the two populations. Clinical, biochemical and radiological data were used to verify whether there is a correlation with the detection of bowel ischemia. Results We found that a Neutrophil-Lymphocyte ratio (NLR) > 6.8 (OR 2.9; 95% CI 1.41–6.21), the presence of mesenteric haziness (OR 2.56; 95% CI 1.11–5.88), decreased wall enhancement (OR 4.3; 95% CI 3.34–10.9) and free abdominal fluid (OR 2.64; 95% CI 1.08–6.16) were significantly associated with bowel ischemia at univariate analysis. At the multivariate logistic regression analysis, only NLR > 6.8 (OR 5.9; 95% CI 2.2–18.6) remained independent predictive factor for small bowel ischemia in non-strangulated adhesive small bowel obstruction, with 78% sensitivity and 65% specificity. Conclusions NLR is a straightforward and reproducible parameter to predict bowel ischemia in cases of non-strangulated adhesive small bowel obstruction. Employing NLR during reevaluation of patients with this condition, who were initially treated conservatively, can help the acute care surgeons in the early prediction of bowel ischemia onset.
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- 2024
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4. Quantification of tumour-infiltrating immune cells through deconvolution of DNA methylation data in Ewing sarcomas
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Sara Patrizi, Silvia Vallese, Lucia Pedace, Claudia Nardini, Alessandra Stracuzzi, Sabina Barresi, Isabella Giovannoni, Luana Abballe, Celeste Antonacci, Ida Russo, Angela Di Giannatale, Rita Alaggio, Franco Locatelli, Giuseppe Maria Milano, and Evelina Miele
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Ewing sarcoma ,DNA methylation ,immune microenvironment ,deconvolution ,immunotherapy ,Genetics ,QH426-470 - Abstract
Ewing Sarcomas (EWS, OMIM#612219) presents a major challenge in pediatric oncology due to its aggressive nature and poor prognosis, particularly in metastatic cases. Genetic fusions involving the EWSR1 gene and ETS family transcription factors are common in EWS, though other rarer fusions have also been identified. Current standard techniques like immunohistochemistry have failed to fully characterize the immune tumor microenvironment of EWS, hindering insights into tumor development and treatment strategies. Recent efforts apply gene expression datasets to quantify tumor-infiltrating immune cells in EWS. Similar deconvolution techniques can be also applied to DNA methylation (DNAm) arrays, which are much more stable compared to RNA-based methods. This study aims to characterize immune cell infiltration in EWS using DNAm array data. We collected 32 EWS samples from 32 consecutive patients referred to Bambino Gesù Children’s Hospital. DNAm analysis was performed by EPIC arrays; data loading, normalization, deconvolution and survival analysis were then performed in R programming environment. We observed a higher content of dendritic cells and longer overall survival in samples with EWSR1::FLI1 translocation compared to samples with rarer fusions. Moreover, T-memory lymphocytes and monocytes emerged as a significant predictor of overall survival. This study underscores the potential of DNAm arrays in providing robust insights into EWS immune profiles, offering a promising avenue for future research. Further investigations with larger cohorts are warranted to validate these findings and explore additional immune cell types influencing EWS outcomes.
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- 2024
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5. The Dolichens database: the lichen biota of the Dolomites
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Luana Francesconi, Matteo Conti, Gabriele Gheza, Stefano Martellos, Pier Luigi Nimis, Chiara Vallese, and Juri Nascimbene
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Botany ,QK1-989 - Abstract
The Dolichens project provides the first dynamic inventory of the lichens of the Dolomites (Eastern Alps, Italy). Occurrence records were retrieved from published and grey literature, reviewed herbaria, unpublished records collected by the authors, and new sampling campaigns, covering a period from 1820 to 2022. Currently, the dataset contains 56,251 records, referring to 1,719 infrageneric taxa, reported from 1820 to 2022, from hilly to nival belts, and corresponding to about half of the species known for the whole Alpine chain. Amongst them, 98% are georeferenced, although most of them were georeferenced a posteriori. The dataset is available through the Global Biodiversity Information Facility (GBIF; https://www.gbif.org/es/dataset/cea3ee2c-1ff1-4f8e-bb37-a99600cb4134) and through the Dolichens website (https://italic.units.it/dolichens/). We expect that this open floristic inventory will contribute to tracking the lichen diversity of the Dolomites over the past 200 years, and providing the basis for future taxonomic, biogeographical, and ecological studies.
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- 2024
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6. Bryophyte, lichen, and vascular plant communities of badland grasslands show weak cross-taxon congruence but high local uniqueness in biancana pediments
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Emanuele Fanfarillo, Stefano Loppi, Claudia Angiolini, Giovanni Bacaro, Elisabetta Bianchi, Gianmaria Bonari, Ilaria Bonini, Giulia Canali, Giacomo Cangelmi, Silvia Cannucci, Annalena Cogoni, Paola De Giorgi, Luca Di Nuzzo, Leopoldo de Simone, Tiberio Fiaschi, Daniel Fontana, Jacopo Franzoni, Antonio Giacò, Paolo Giordani, Martina Grattacaso, Lorenzo Lazzaro, Stefano Martellos, Irene Mazza, Michele Mugnai, Giulio Pandeli, Claudia Perini, Lorenzo Pinzani, Silvia Poponessi, Sonia Ravera, Elena Salerni, Adriano Stinca, Manuel Tiburtini, Chiara Vallese, and Simona Maccherini
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Biodiversity surrogate ,Cryptogams ,Community ecology ,Mosses ,Multi-taxon ,Ecology ,QH540-549.5 - Abstract
Cross-taxon congruence, i.e., using certain taxonomic groups as surrogates for others, is receiving growing interest since it may allow decreasing efforts in biodiversity studies. In this work, we investigated the patterns of cross-taxon congruence in species richness and composition between communities of bryophytes, lichens, and vascular plants in different biancana grasslands of a Special Area of Conservation (SAC) of central Italy. We recorded species presence and abundance in 16 plots of 1 × 1 m size and analyzed the data using Procrustes correlation, co-correspondence analysis, and indicator species analysis. We did not highlight any correlation in species richness and composition between the three taxonomic groups. Conversely, the species composition of bryophyte communities was predictive of the species composition of lichen communities. Moreover, lichen richness was negatively correlated with the total cover of vascular plants. Indicator species analysis evidenced the presence of species from the three biotic communities being particularly related, at least at the local scale, to biancana pediments, like the bryophytes Didymodon acutus and Trichostomum crispulum, the lichens Enchylium tenax, Cladonia foliacea, and Psora decipiens, and the vascular plants Brachypodium distachyon, Parapholis strigosa, and Artemisia caerulescens subsp. cretacea. In the biancana pediments, acrocarp mosses, squamulose lichens, therophyte plants and chamaephyte plants coexisted. In spite of the weak cross-taxon congruence between the three taxonomic groups, this study could highlight a locally unique diversity of bryophytes, lichens, and vascular plants related to the extreme environment of biancana pediments, selected by high soil salinity and deposition from the upper eroded slope. Soil erosion and deposition in biancana badlands supports the increase of local multi-taxonomic plant diversity by creating unique ecosystems. Such biodiversity should be considered locally at risk of disappearance, due to the ongoing vanishing of biancana badlands in central Italy.
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- 2024
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7. NLRP3 inflammasome-mitochondrion loop in autism spectrum disorder
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Vallese, Andrea, Cordone, Valeria, Ferrara, Francesca, Guiotto, Anna, Gemmo, Laura, Cervellati, Franco, Hayek, Joussef, Pecorelli, Alessandra, and Valacchi, Giuseppe
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- 2024
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8. Spindle Cell Lesions with Oncogenic EGFR Kinase Domain Aberrations: Expanding the Spectrum of Protein Kinase–Related Mesenchymal Tumors
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Vallese, Silvia, Barresi, Sabina, Hiemcke-Jiwa, Laura, Patrizi, Sara, Kester, Lennart, Giovannoni, Isabella, Cardoni, Antonello, Pedace, Lucia, Nardini, Claudia, Tancredi, Chantal, Desideri, Martina, von Deimling, Andreas, Mura, Rosa M., Piga, Michela, Errico, Maria E., Stracuzzi, Alessandra, Alaggio, Rita, Miele, Evelina, and Flucke, Uta
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- 2024
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9. Malignant peripheral nerve sheath tumor (MPNST) and MPNST-like entities are defined by a specific DNA methylation profile in pediatric and juvenile population
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Sara Patrizi, Evelina Miele, Lorenza Falcone, Silvia Vallese, Sabrina Rossi, Sabina Barresi, Isabella Giovannoni, Lucia Pedace, Claudia Nardini, Ilaria Masier, Luana Abballe, Antonella Cacchione, Ida Russo, Angela Di Giannatale, Valentina Di Ruscio, Claudia Maria Salgado, Angela Mastronuzzi, Andrea Ciolfi, Marco Tartaglia, Giuseppe Maria Milano, Franco Locatelli, and Rita Alaggio
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Malignant peripheral nerve sheath tumors ,DNA methylation ,Sarcoma classifier ,H3K27 trimethylation ,Medicine ,Genetics ,QH426-470 - Abstract
Abstract Background Malignant peripheral nerve sheath tumors (MPNSTs) account for 3–10% of pediatric sarcomas, 50% of which occur in neurofibromatosis type 1 (NF1). Sporadic MPNSTs diagnosis may be challenging due to the absence of specific markers, apart from immunohistochemical H3K27me3 loss. DNA methylation (DNAm) profiling is a useful tool for brain and mesenchymal neoplasms categorization, and MPNSTs exhibit a specific DNAm signature. An MPNST-like group has recently been recognized, including pediatric tumors with retained H3K27me3 mark and clinical/histological features not yet well explored. This study aims to characterize the DNAm profile of pediatric/juvenile MPNSTs/MPNST-like entities and its diagnostic/prognostic relevance. Results We studied 42 tumors from two groups. Group 1 included 32 tumors histologically diagnosed as atypical neurofibroma (ANF) (N = 5) or MPNST (N = 27); group 2 comprised 10 tumors classified as MPNST-like according to Heidelberg sarcoma classifier. We performed further immunohistochemical and molecular tests to reach an integrated diagnosis. In group 1, DNAm profiling was inconclusive for ANF; while, it confirmed the original diagnosis in 12/27 MPNSTs, all occurring in NF1 patients. Five/27 MPNSTs were classified as MPNST-like: Integrated diagnosis confirmed MPNST identity for 3 cases; while, the immunophenotype supported the change to high-grade undifferentiated spindle cell sarcoma in 2 samples. The remaining 10/27 MPNSTs variably classified as schwannoma, osteosarcoma, BCOR-altered sarcoma, rhabdomyosarcoma (RMS)-MYOD1 mutant, RMS-like, and embryonal RMS or did not match with any defined entity. Molecular analysis and histologic review confirmed the diagnoses of BCOR, RMS-MYOD1 mutant, DICER1-syndrome and ERMS. Group 2 samples included 5 high-grade undifferentiated sarcomas/MPNSTs and 5 low-grade mesenchymal neoplasms. Two high-grade and 4 low-grade lesions harbored tyrosine kinase (TRK) gene fusions. By HDBSCAN clustering analysis of the whole cohort we identified two clusters mainly distinguished by H3K27me3 epigenetic signature. Exploring the copy number variation, high-grade tumors showed frequent chromosomal aberrations and CDKN2A/B loss significantly impacted on survival in the MPNSTs cohort. Conclusion DNAm profiling is a useful tool in diagnostic work-up of MPNSTs. Its application in a retrospective series collected during pre-molecular era contributed to classify morphologic mimics. The methylation group MPNST-like is a ‘hybrid’ category in pediatrics including high-grade and low-grade tumors mainly characterized by TRK alterations.
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- 2024
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10. A Technological Update on Heat Pumps for Industrial Applications
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Sergio Bobbo, Giulia Lombardo, Davide Menegazzo, Laura Vallese, and Laura Fedele
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heat pumps ,cycle configurations ,energy efficiency ,industrial applications ,review ,Technology - Abstract
It is now widely confirmed by scientific evidence that greenhouse gas emissions must be reduced to counteract the effects of global warming. The production of heat for industrial purposes is responsible for 36.8% of world energy-related emissions due to the widespread use of fossil fuels. Heat pumps are a key technology in the transition towards more sustainable industrial processes. In this paper, a systematic review of the literature produced in the last 5 years in international journals regarding the integration of heat pumps in industrial processes is presented. Firstly, papers presenting innovative configurations for high temperature heat pumps (HTHP), i.e., heat pumps delivering temperatures in the range between 100 °C and 200 °C, suitable for many industrial processes but still under development, are reviewed. Then, papers reporting innovative solutions for the integration of heat pumps in specific industrial processes and sectors (e.g., distillation, drying, desalination, etc.) are analyzed. Finally, the literature about alternative low-GWP refrigerants for industrial heat pumps, both pure compounds and mixtures, is described. It is concluded that many progresses have been realized in the last 5 years (2020–2024) regarding the identification of innovative heat pumps for industrial applications, but further research is certainly required.
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- 2024
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11. Data Analysis to Evaluate the Influence of Drought on Water Quality in the Colorado River Basin
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Federico Danilo Vallese, Mariano Trillini, Luciana Dunel Guerra, Marcelo Fabian Pistonesi, and Jorge Omar Pierini
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drought ,water quality index ,water management ,hydrological basins ,standardized drought index ,Hydraulic engineering ,TC1-978 ,Water supply for domestic and industrial purposes ,TD201-500 - Abstract
Droughts negatively affect basins by reducing the river streamflow and increasing ion concentrations due to lower dilution. This study examines the impact of droughts in the Colorado River basin in Argentina. For this purpose, data were collected during the period from 2015 to 2021 at eight monitoring stations containing water from the river and drainage canals. The Standardized Precipitation Index (SPI) was used to analyze droughts from 1966 to 2020, and the Mann–Kendall test was used to evaluate the precipitation trends. In addition, water quality indices for human consumption (DWQI) and livestock (LWQI) were calculated by evaluating physicochemical parameters. The results show an intensification of drought since 2007, with an SPI of −1.5 in 2008, which affected the river streamflow regime and reduced the dilution capacity in the Casa de Piedra Dam. This reduction led to the deterioration of the water quality, with DWQI values indicating that 85% of the samples were not suitable for human consumption but were suitable for livestock consumption. In the drainage canals, most of the samples were of low quality for livestock consumption. The physicochemical analyses show that although some parameters (Na+, K+, CO32− + HCO3−, and Cl−) were at acceptable levels, others (electrical conductivity, SO42−, and Ca2+) exceeded the WHO’s limits, representing risks to human and livestock health. This study provides insights into how droughts and streamflow regulation affect the water quality in semiarid basins and highlights the broader applicability to other regions that present similar challenges under climate change scenarios.
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- 2024
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12. Bryophyte, lichen, and vascular plant communities of badland grasslands show weak cross-taxon congruence but high local uniqueness in biancana pediments
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Fanfarillo, Emanuele, Loppi, Stefano, Angiolini, Claudia, Bacaro, Giovanni, Bianchi, Elisabetta, Bonari, Gianmaria, Bonini, Ilaria, Canali, Giulia, Cangelmi, Giacomo, Cannucci, Silvia, Cogoni, Annalena, De Giorgi, Paola, Di Nuzzo, Luca, de Simone, Leopoldo, Fiaschi, Tiberio, Fontana, Daniel, Franzoni, Jacopo, Giacò, Antonio, Giordani, Paolo, Grattacaso, Martina, Lazzaro, Lorenzo, Martellos, Stefano, Mazza, Irene, Mugnai, Michele, Pandeli, Giulio, Perini, Claudia, Pinzani, Lorenzo, Poponessi, Silvia, Ravera, Sonia, Salerni, Elena, Stinca, Adriano, Tiburtini, Manuel, Vallese, Chiara, and Maccherini, Simona
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- 2024
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13. The factors obstaculating adherence to the gluten free diet in the youth bands: an observational study
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Bartolomeo Rinaldi, Vittoria Vallana, Silvia Vallese, Benedetta Musso, Giorgio Bergesio, and Andrea Strocco
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celiac disease ,gluten-free foods ,gluten free diet ,adherence difficulties ,Nursing ,RT1-120 - Abstract
ABSTRACT Introduction Celiac Disease (CD) affects the small intestine and it’s characterized by a high sensitivity to gluten. Among the main signs and symptoms, there are typical or intestinal ones such as abdominal pain, abdominal swelling, diarrhea, weight loss, atrophy of the intestinal villi. At the moment, the only effective therapy is to follow a gluten-free diet during a long-life. The aim of the study is to investigate the difficulties of adherence to GFD in young people with CD. Materials and methods A questionnaire was administered to the population under study (15-30 years), between 9 July 2022 and 29 August 2022. The interviewees answered 28 questions: 5 concerning the socio-demographic variable, 23 concerning the difficulties of adherence to the GFD. Results 227 people answered the questionnaire. Among them, a low percentage was sent to the attention of a dietician or psychologist. 78.8% prepare their own meal independently. 78.4% believe they know very well the foods they can eat and 93% say they follow the diet stringently. Discussion Following the GF diet is a challenge for most young people with CD. Restaurants offering GF meals are limited and this could be a reason for giving up leisure and socializing, or in the worst-case scenario, the person with CD is forced not to join the GFD. The risk of contamination that can involve fear, isolation, embarrassment in asking questions, is another factor to always keep in mind. Conclusion Adherence difficulties begins with the CD diagnosis and the taking charge. The main problem in related to the social setting of young people, who wants to live without complications due to crance of places with GF food. Literature should investigate about adherence difficulties, instead of quality of life and behaviour CD related. It’s necessary to improve the attention on GF world to decrease discomfort about medical conditions. Keywords FD, celiac disease, gluten-free foods, therapy, adherence difficulties.
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- 2023
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14. Multivariate calibration strategies for the simultaneous quantification of aluminium and vanadium in Ti6Al4V alloys
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Belén, Federico, Vallese, Federico Danilo, de Sousa Fernandes, David Douglas, Silva de Araújo, Alisson, de Araújo Gomes, Adriano, Messina, Paula Verónica, and Pistonesi, Marcelo Fabian
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- 2024
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15. Synovial Sarcoma of the Kidney: Diagnostic Pitfalls in a Case with Myxoid Monophasic Differentiation and No Epithelial Biomarkers Expression
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Francesca Pagliuca, Emma Carraturo, Anna De Chiara, Silvia Vallese, Isabella Giovannoni, Rita Alaggio, Lucia Cannella, Salvatore Tafuto, and Renato Franco
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synovial sarcoma ,clear cell sarcoma of the kidney ,BCOR ,soft tissue tumours ,RNA sequencing ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Synovial sarcomas are soft tissue tumours of uncertain origin, most commonly found in the upper or lower extremities. They are characterised by distinctive chromosomal rearrangements involving the gene SS18. Synovial sarcomas can occasionally arise also in visceral sites, but retroperitoneal SSs are very unusual. Among them, a few primary renal synovial sarcomas have been described in the scientific literature. Primary renal synovial sarcomas tend to be monophasic and often show cystic changes. Histologically, they can closely resemble other primary kidney tumours, mainly paediatric tumours such as nephroblastoma and clear cell sarcoma of the kidney. In the current work, a primary synovial sarcoma of the kidney with unusual morphological features (extensively myxoid stroma and immunohistochemical positivity for BCOR) is described. Molecular analysis, through targeted RNA sequencing, was of invaluable help in reaching the correct diagnosis. Despite locally advanced disease at presentation, the patient showed an unexpectedly brilliant response to chemotherapy.
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- 2024
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16. Exploiting the successive projections algorithm to improve the quantification of chemical constituents and discrimination of botanical origin of Argentinean bee-pollen
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Vallese, Federico Danilo, Paoloni, Soledad García, Springer, Valeria, Fernandes, David Douglas de Sousa, Diniz, Paulo Henrique Gonçalves Dias, and Pistonesi, Marcelo Fabián
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- 2024
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17. It Came From the Closet: Queer Reflections on Horror
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Joe Vallese, Joe Vallese
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- 2023
18. Perturbation of the host cell Ca2+ homeostasis and ER-mitochondria contact sites by the SARS-CoV-2 structural proteins E and M
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Elena Poggio, Francesca Vallese, Andreas J. W. Hartel, Travis J. Morgenstern, Scott A. Kanner, Oliver Rauh, Flavia Giamogante, Lucia Barazzuol, Kenneth L. Shepard, Henry M. Colecraft, Oliver Biggs Clarke, Marisa Brini, and Tito Calì
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Cytology ,QH573-671 - Abstract
Abstract Coronavirus disease (COVID-19) is a contagious respiratory disease caused by the SARS-CoV-2 virus. The clinical phenotypes are variable, ranging from spontaneous recovery to serious illness and death. On March 2020, a global COVID-19 pandemic was declared by the World Health Organization (WHO). As of February 2023, almost 670 million cases and 6,8 million deaths have been confirmed worldwide. Coronaviruses, including SARS-CoV-2, contain a single-stranded RNA genome enclosed in a viral capsid consisting of four structural proteins: the nucleocapsid (N) protein, in the ribonucleoprotein core, the spike (S) protein, the envelope (E) protein, and the membrane (M) protein, embedded in the surface envelope. In particular, the E protein is a poorly characterized viroporin with high identity amongst all the β-coronaviruses (SARS-CoV-2, SARS-CoV, MERS-CoV, HCoV-OC43) and a low mutation rate. Here, we focused our attention on the study of SARS-CoV-2 E and M proteins, and we found a general perturbation of the host cell calcium (Ca2+) homeostasis and a selective rearrangement of the interorganelle contact sites. In vitro and in vivo biochemical analyses revealed that the binding of specific nanobodies to soluble regions of SARS-CoV-2 E protein reversed the observed phenotypes, suggesting that the E protein might be an important therapeutic candidate not only for vaccine development, but also for the clinical management of COVID designing drug regimens that, so far, are very limited.
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- 2023
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19. Ox-inflammasome involvement in neuroinflammation
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Vallese, Andrea, Cordone, Valeria, Pecorelli, Alessandra, and Valacchi, Giuseppe
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- 2023
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20. An improved successive projections algorithm version to variable selection in multiple linear regression
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Canova, Luciana dos Santos, Vallese, Federico Danilo, Pistonesi, Marcelo Fabian, and de Araújo Gomes, Adriano
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- 2023
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21. Surgical oncological emergencies in octogenarian patients
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Alberto Friziero, Cosimo Sperti, Federica Riccio, Irene Sole Zuin, Lorenzo Vallese, Simone Serafini, Alessandra Amico, Valeria Valli, Chiara Da Re, Nicola Baldan, Michele Valmasoni, and Gianfranco Da Dalt
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age ,colectomy ,colon cancer ,emergency ,octogenarians ,surgical oncology ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
BackgroundSurgical oncological emergencies represent a frequent challenge in acute settings, with postoperative courses characterized by high morbidity and mortality. An accurate selection of patients who could benefit from surgery is essential to avoid unnecessary invasive treatment. In this study, we tried to determine if advanced age (>80 years) represents a risk factor for negative short-term outcome in patients undergoing emergency surgery for acute abdominal oncological illness.MethodsWe retrospectively analyzed the records of patients who underwent emergency oncological surgery at the Department of Acute Care Surgery of Padua General Hospital from January 2018 to December 2022. One hundred two cancer patients were included in the study. Among them, 42 were aged ≥80 years (41%). Multiple preoperative and postoperative parameters were recorded, and the follow-up period was at least 90 days. Multivariate logistic regression analyses were used to identify factors associated with short-term postoperative outcomes.ResultsIn the octogenarian group, 30-day mortality was 11% vs. 9.5% in the younger group [p = not significant (ns)] and 90-day mortality was 17.6% in the octogenarian group vs. 20.5% in the younger group (p = ns). Postoperative morbidity and hospital length of stay were not significantly different in the two groups. Low albumin levels [odds ratio (OR) 30.6, 9.51–87.07] and elevated lactate dehydrogenase (LDH) levels (OR 26.4, 9.18–75.83) were predictive for short-term mortality in surgical oncological emergencies.ConclusionAdvanced age is not a risk factor for negative outcomes in surgical oncological emergencies. Therefore, surgical options should be considered in octogenarians with oncological emergencies and acceptable clinical conditions. Serum albumin levels and LDH can help predict the postoperative outcome after surgery for oncological emergencies.
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- 2023
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22. A hotspot of lichen diversity and lichenological research in the Alps: the Paneveggio-Pale di San Martino Natural Park (Italy)
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Juri Nascimbene, Gabriele Gheza, Peter O. Bilovitz, Luana Francesconi, Josef Hafellner, Helmut Mayrhofer, Maurizio Salvadori, Chiara Vallese, and Pier Luigi Nimis
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Botany ,QK1-989 - Abstract
A checklist of 916 lichenised taxa is reported from the Paneveggio-Pale di San Martino Natural Park and its surroundings (Trentino-Alto Adige, N Italy), based on 7351 records from: (a) 72 literature sources, (b) eight public and private herbaria and (c) field observations by some of the authors. The study area appears as a hotspot of lichen diversity, hosting 30.1% of the lichen biota of the Alps in a territory that has 0.064% of their total surface area. This is mainly due to its high climatical, geological and orographic heterogeneity, but also to the long history of lichenological exploration, that started in the 19th century with Ferdinand Arnold and is still ongoing. The present work highlights the importance of detailed species inventories to support knowledge of biodiversity patterns, taxonomy and ecology and to properly address conservation issues. Fuscidea mollis var. caesioalbescens, Hydropunctaria scabra, Protoparmelia badia var. cinereobadia and Variospora paulii are new to Italy, 18 other taxa are new to Trentino-Alto Adige.
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- 2022
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23. Symmetric activation and modulation of the human calcium-sensing receptor
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Park, Jinseo, Zuo, Hao, Frangaj, Aurel, Fu, Ziao, Yen, Laura Y., Zhang, Zhening, Mosyak, Lidia, Slavkovich, Vesna N., Liu, Jonathan, Ray, Kimberly M., Cao, Baohua, Vallese, Francesca, Geng, Yong, Chen, Shaoxia, Grassucci, Robert, Dandey, Venkata P., Tan, Yong Zi, Eng, Edward, Lee, Yeji, Kloss, Brian, Liu, Zheng, Hendrickson, Wayne A., Potter, Clinton S., Carragher, Bridget, Graziano, Joseph, Conigrave, Arthur D., Frank, Joachim, Clarke, Oliver B., and Fan, Qing R.
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- 2021
24. The role of potassium current in the pulmonary response to environmental oxidative stress
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Canella, Rita, Benedusi, Mascia, Vallese, Andrea, Pecorelli, Alessandra, Guiotto, Anna, Ferrara, Francesca, Rispoli, Giorgio, Cervellati, Franco, and Valacchi, Giuseppe
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- 2023
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25. Notulae to the Italian flora of algae, bryophytes, fungi and lichens: 14
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Sonia Ravera, Marta Puglisi, Alfredo Vizzini, Cecilia Totti, Michele Aleffi, Giulia Bacilliere, Renato Benesperi, Elisabetta Bianchi, Fabrizio Boccardo, Rossano Bolpagni, Wolfgang von Brackel, Giulia Canali, Giulia Celli, Annalena Cogoni, Antonio B. De Giuseppe, Stefano Di Natale, Luca Di Nuzzo, Francesco Dovana, Gabriele Gheza, Paolo Giordani, Carlo Maria Giorgi, Daniele Giugia, Mauro Iberite, Deborah Isocrono, Jiří Malíček, Helmut Mayrhofer, Marco Muscioni, Juri Nascimbene, Pier Luigi Nimis, Silvia Ongaro, Nicodemo G. Passalacqua, Pino Piccardo, Silvia Poponessi, María Prieto Álvaro, Filippo Prosser, Domenico Puntillo, Francesco Santi, Elisabetta Scassellati, Matthias Schultz, Saverio Sciandrello, Giovanni Sicoli, Adriano Soldano, Manuel Tiburtini, and Chiara Vallese
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Botany ,QK1-989 - Abstract
In this contribution, new data concerning bryophytes, fungi and lichens of the Italian flora are presented. It includes new records and confirmations for the algal genus Chara, for the bryophyte genera Bryum, Grimmia, Cephaloziella, Hypnum, Nogopterium, Physcomitrium, Polytrichastrum, Rhynchostegiella, Saelania, and Schistostega, the fungal genera Cortinarius, Lentinellus, Omphalina, and Xerophorus, and the lichen genera Acarospora, Agonimia, Candelariella, Cladonia, Graphis, Gyalolechia, Hypogymnia, Lichinella, Megalaria, Nephroma, Ochrolechia, Opegrapha, Peltigera, Placidium, Ramalina, Rhizoplaca, Ropalospora, Strangospora, Toniniopsis, Usnea, and Zahlbrucknerella.
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- 2022
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26. The ataxia-linked E1081Q mutation affects the sub-plasma membrane Ca2+-microdomains by tuning PMCA3 activity
- Author
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Francesca Vallese, Lorenzo Maso, Flavia Giamogante, Elena Poggio, Lucia Barazzuol, Andrea Salmaso, Raffaele Lopreiato, Laura Cendron, Lorella Navazio, Ginevra Zanni, Yvonne Weber, Tatjana Kovacevic-Preradovic, Boris Keren, Alessandra Torraco, Rosalba Carrozzo, Francesco Peretto, Caterina Peggion, Stefania Ferro, Oriano Marin, Giuseppe Zanotti, Tito Calì, Marisa Brini, and Ernesto Carafoli
- Subjects
Cytology ,QH573-671 - Abstract
Abstract Calcium concentration must be finely tuned in all eukaryotic cells to ensure the correct performance of its signalling function. Neuronal activity is exquisitely dependent on the control of Ca2+ homeostasis: its alterations ultimately play a pivotal role in the origin and progression of many neurodegenerative processes. A complex toolkit of Ca2+ pumps and exchangers maintains the fluctuation of cytosolic Ca2+ concentration within the appropriate threshold. Two ubiquitous (isoforms 1 and 4) and two neuronally enriched (isoforms 2 and 3) of the plasma membrane Ca2+ATPase (PMCA pump) selectively regulate cytosolic Ca2+ transients by shaping the sub-plasma membrane (PM) microdomains. In humans, genetic mutations in ATP2B1, ATP2B2 and ATP2B3 gene have been linked with hearing loss, cerebellar ataxia and global neurodevelopmental delay: all of them were found to impair pump activity. Here we report three additional mutations in ATP2B3 gene corresponding to E1081Q, R1133Q and R696H amino acids substitution, respectively. Among them, the novel missense mutation (E1081Q) immediately upstream the C-terminal calmodulin-binding domain (CaM-BD) of the PMCA3 protein was present in two patients originating from two distinct families. Our biochemical and molecular studies on PMCA3 E1081Q mutant have revealed a splicing variant-dependent effect of the mutation in shaping the sub-PM [Ca2+]. The E1081Q substitution in the full-length b variant abolished the capacity of the pump to reduce [Ca2+] in the sub-PM microdomain (in line with the previously described ataxia-related PMCA mutations negatively affecting Ca2+ pumping activity), while, surprisingly, its introduction in the truncated a variant selectively increased Ca2+ extrusion activity in the sub-PM Ca2+ microdomains. These results highlight the importance to set a precise threshold of [Ca2+] by fine-tuning the sub-PM microdomains and the different contribution of the PMCA splice variants in this regulation.
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- 2022
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27. Perturbation of the host cell Ca2+ homeostasis and ER-mitochondria contact sites by the SARS-CoV-2 structural proteins E and M
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Poggio, Elena, Vallese, Francesca, Hartel, Andreas J. W., Morgenstern, Travis J., Kanner, Scott A., Rauh, Oliver, Giamogante, Flavia, Barazzuol, Lucia, Shepard, Kenneth L., Colecraft, Henry M., Clarke, Oliver Biggs, Brini, Marisa, and Calì, Tito
- Published
- 2023
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28. L’aderenza terapeutica nelle persone dopo Sindrome Coronarica Acuta: uno studio osservazionale
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Benedetta Musso, Giorgio Bergesio, Cinzia Padovan, Silvia Vallese, and Bartolomeo Rinaldi
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Infarto miocardico acuto (IMA) ,sindrome coronarica acuta (SCA) ,aderenza terapeutica ,terapia farmacologica ,Medicine ,Therapeutics. Pharmacology ,RM1-950 - Abstract
INTRODUZIONE La Sindrome Coronarica Acuta è una delle principali cause di morte al mondo. La scarsa aderenza alla terapia post-Infarto miocardico acuto (IMA) può condurre a re-ospedalizzazioni, aumento dei costi sanitari e prognosi infausta. In seguito alla malattia coronarica, i farmaci sono il trattamento migliore per evitare nuovi eventi cardiovascolari e incrementare la sopravvivenza. Obiettivo dello studio è quello di individuare i determinanti di scarsa aderenza terapeutica in un campione di pazienti in follow up post-IMA nel reparto di Cardiologia dell’Ospedale “Cardinal Massaia” di Asti. MATERIALI E METODI È stato somministrato telefonicamente un questionario composto di 33 items derivanti dalla la scala Moriski e il Brief Medication Questionnaire. Il punteggio finale forniva un dato di aderenza terapeutica (scarsa, media e totale). RISULTATI Sono stati inclusi nello studio 184 pazienti in follow up post-IMA. Dai dati emerge che il 50% (92) dei pazienti intervistati ha dimenticato almeno una volta parte della terapia, il 42% (77) non conosce i farmaci che assume e i loro effetti. Il 36% (66) del campione valuta l’importanza dei farmaci rispetto alla propria vita con un punteggio pari a 9/10 e il 27% (50) con un punteggio di 10/10. DISCUSSIONE L’aderenza alla terapia rappresenta una seria criticità. Dal confronto con la letteratura sembra che la dimenticanza sia il parametro più rappresentativo, insieme al timore per gli effetti collaterali e la dipendenza. CONCLUSIONI Dall’analisi delle cause è emerso che la disinformazione generale è il principale motivo che conduce alla dimenticanza della terapia. Ricercatori, organizzazioni, personale sanitario e associazioni di pazienti devono quindi lavorare in stretta sinergia per migliorare i percorsi di follow up e controllare gli effetti della paura di reazioni avverse o dipendenza.
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- 2023
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29. Architecture of the human erythrocyte ankyrin-1 complex
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Vallese, Francesca, Kim, Kookjoo, Yen, Laura Y., Johnston, Jake D., Noble, Alex J., Calì, Tito, and Clarke, Oliver Biggs
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- 2022
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30. Cryo-EM structures of Escherichia coli cytochrome bo₃ reveal bound phospholipids and ubiquinone-8 in a dynamic substrate binding site
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Li, Jiao, Han, Long, Vallese, Francesca, Ding, Ziqiao, Choi, Sylvia K., Hong, Sangjin, Luo, Yanmei, Liu, Bin, Chan, Chun Kit, Tajkhorshid, Emad, Zhu, Jiapeng, Clarke, Oliver, Zhang, Kai, and Gennis, Robert
- Published
- 2021
31. It Came from the Closet: Queer Reflections on Horror
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Joe Vallese, Joe Vallese
- Published
- 2022
32. Ubiquitination as a key regulatory mechanism for O3-induced cutaneous redox inflammasome activation
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Ferrara, Francesca, Cordone, Valeria, Pecorelli, Alessandra, Benedusi, Mascia, Pambianchi, Erika, Guiotto, Anna, Vallese, Andrea, Cervellati, Franco, and Valacchi, Giuseppe
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- 2022
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33. Corrigendum: Validation of the binding stoichiometry between HCN channels and their neuronal regulator TRIP8b by single molecule measurements
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Andrea Saponaro, Francesca Vallese, Alessandro Porro, and Oliver B. Clarke
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HCN channels ,Ihcurrent ,TRIP8b ,cAMP ,mass photometry ,stoichiometry ,Physiology ,QP1-981 - Published
- 2023
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34. A Technological Update on Heat Pumps for Industrial Applications.
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Bobbo, Sergio, Lombardo, Giulia, Menegazzo, Davide, Vallese, Laura, and Fedele, Laura
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GREENHOUSE gases ,HEAT pump efficiency ,HEAT pumps ,SPECIFIC heat ,MANUFACTURING processes - Abstract
It is now widely confirmed by scientific evidence that greenhouse gas emissions must be reduced to counteract the effects of global warming. The production of heat for industrial purposes is responsible for 36.8% of world energy-related emissions due to the widespread use of fossil fuels. Heat pumps are a key technology in the transition towards more sustainable industrial processes. In this paper, a systematic review of the literature produced in the last 5 years in international journals regarding the integration of heat pumps in industrial processes is presented. Firstly, papers presenting innovative configurations for high temperature heat pumps (HTHP), i.e., heat pumps delivering temperatures in the range between 100 °C and 200 °C, suitable for many industrial processes but still under development, are reviewed. Then, papers reporting innovative solutions for the integration of heat pumps in specific industrial processes and sectors (e.g., distillation, drying, desalination, etc.) are analyzed. Finally, the literature about alternative low-GWP refrigerants for industrial heat pumps, both pure compounds and mixtures, is described. It is concluded that many progresses have been realized in the last 5 years (2020–2024) regarding the identification of innovative heat pumps for industrial applications, but further research is certainly required. [ABSTRACT FROM AUTHOR]
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- 2024
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35. Data Analysis to Evaluate the Influence of Drought on Water Quality in the Colorado River Basin.
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Vallese, Federico Danilo, Trillini, Mariano, Dunel Guerra, Luciana, Pistonesi, Marcelo Fabian, and Pierini, Jorge Omar
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WATER quality management ,REGULATION of rivers ,WATER quality ,ANIMAL health ,CLIMATE change - Abstract
Droughts negatively affect basins by reducing the river streamflow and increasing ion concentrations due to lower dilution. This study examines the impact of droughts in the Colorado River basin in Argentina. For this purpose, data were collected during the period from 2015 to 2021 at eight monitoring stations containing water from the river and drainage canals. The Standardized Precipitation Index (SPI) was used to analyze droughts from 1966 to 2020, and the Mann–Kendall test was used to evaluate the precipitation trends. In addition, water quality indices for human consumption (DWQI) and livestock (LWQI) were calculated by evaluating physicochemical parameters. The results show an intensification of drought since 2007, with an SPI of −1.5 in 2008, which affected the river streamflow regime and reduced the dilution capacity in the Casa de Piedra Dam. This reduction led to the deterioration of the water quality, with DWQI values indicating that 85% of the samples were not suitable for human consumption but were suitable for livestock consumption. In the drainage canals, most of the samples were of low quality for livestock consumption. The physicochemical analyses show that although some parameters (Na
+ , K+ , CO3 2− + HCO3 − , and Cl− ) were at acceptable levels, others (electrical conductivity, SO4 2− , and Ca2+ ) exceeded the WHO's limits, representing risks to human and livestock health. This study provides insights into how droughts and streamflow regulation affect the water quality in semiarid basins and highlights the broader applicability to other regions that present similar challenges under climate change scenarios. [ABSTRACT FROM AUTHOR]- Published
- 2024
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36. Comparison of Pollutant Effects on Cutaneous Inflammasomes Activation
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John Ivarsson, Francesca Ferrara, Andrea Vallese, Anna Guiotto, Sante Colella, Alessandra Pecorelli, and Giuseppe Valacchi
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oxinflammation ,inflammasome ,pollutants ,skin ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
The skin is the outermost layer of the body and, therefore, is exposed to a variety of stressors, such as environmental pollutants, known to cause oxinflammatory reactions involved in the exacerbation of several skin conditions. Today, inflammasomes are recognized as important modulators of the cutaneous inflammatory status in response to air pollutants and ultraviolet (UV) light exposure. In this study, human skin explants were exposed to the best-recognized air pollutants, such as microplastics (MP), cigarette smoke (CS), diesel engine exhaust (DEE), ozone (O3), and UV, for 1 or 4 days, to explore how each pollutant can differently modulate markers of cutaneous oxinflammation. Exposure to environmental pollutants caused an altered oxidative stress response, accompanied by increased DNA damage and signs of premature skin aging. The effect of specific pollutants being able to exert different inflammasomes pathways (NLRP1, NLRP3, NLRP6, and NLRC4) was also investigated in terms of scaffold formation and cell pyroptosis. Among all environmental pollutants, O3, MP, and UV represented the main pollutants affecting cutaneous redox homeostasis; of note, the NLRP1 and NLRP6 inflammasomes were the main ones modulated by these outdoor stressors, suggesting their role as possible molecular targets in preventing skin disorders and the inflammaging events associated with environmental pollutant exposure.
- Published
- 2023
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37. Lobaria pulmonaria (L.) Hoffm.: The Multifaceted Suitability of the Lung Lichen to Monitor Forest Ecosystems
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Sonia Ravera, Renato Benesperi, Elisabetta Bianchi, Giorgio Brunialti, Luca Di Nuzzo, Luisa Frati, Paolo Giordani, Deborah Isocrono, Juri Nascimbene, Chiara Vallese, and Luca Paoli
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bioaccumulation ,biodiversity ,cyanolichen ,ecosystem functioning ,forestry practices ,lichen herbivory ,Plant ecology ,QK900-989 - Abstract
Lobaria pulmonaria (L.) Hoffm. is a tripartite, broad-lobed foliose lichen usually found on bark and on epiphytic and epilithic mosses in humid forests. Currently, the species is threatened in most European countries because of its sensitivity to environmental alterations. In this paper, a total of 107 previous studies across more than 50 years were analysed to gain insight into the multiple roles that L. pulmonaria plays in forest habitats, specifically relating to ecosystem services and as environmental bioindicator. Content analysis was employed to systematically characterise and classify the existing papers on the functions performed by L. pulmonaria into several groups mostly based on research topic and scope. Two main types of ecosystem services (N2 fixation and feeding) offered by L. pulmonaria have been identified, with varying research aims and types of parameters measured in the studies. Two aspects of current biomonitoring applications using L. pulmonaria in forest habitats (concerning atmospheric pollution and forest management) were analysed, and it was found that the number of related studies increased significantly in recent years. Finally, the current practices of monitoring using L. pulmonaria as a biological indicator are discussed, and recommendations are provided.
- Published
- 2023
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38. Red wood ants shape epiphytic lichen assemblages in montane silver fir forests
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Di Nuzzo L, Masoni A, Frizzi F, Bianchi E, Castellani MB, Balzani P, Morandi F, Sozzi Y, Vallese C, Santini G, and Benesperi R
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Formica paralugubris ,Red Wood Ants ,Lichen Diversity ,Impact ,Introduced Species ,Functional Diversity ,Forestry ,SD1-669.5 - Abstract
The Formica rufa group comprises several ant species which are collectively referred to as “red wood ants” (hereafter RWA). These species have key roles in forest ecosystems, where they are ecologically dominant and greatly influence the dynamics of the habitat they colonise. Various studies have shown how their trophic activity may affect other organisms, which include both other invertebrates and plants. We can therefore hypothesize that their presence could affect the taxonomic and functional composition of epiphytes, despite clear information on such an effect is lacking. This study aimed to fill this research gap by evaluating whether the presence of red wood ants could affect the structure and composition of lichen communities. We selected two sites on the Apennine Mountains in Italy, where the red wood ant F. paralugubris was introduced from the Alps more than 50 years ago. In each site, lichen assemblages on Abies alba trees located within the colonised areas were compared to those from nearby, non-occupied areas. The results allowed for the identification of significant effects of F. paralugubris on the structure of lichen communities. Although there was no detectable impact on lichen species richness, a significant difference in their community composition between colonised and control sites was detected. Furthermore, ant presence seemed to be associated with specific lichen functional traits such as asexual reproduction. We argue that RWA could affect the lichen community either directly, e.g., by actively dispersing the species capable of asexual reproduction through their movements on trees (ant-mediated dispersion), or indirectly through herbivore exclusion. Finally, we also observed differences in β-diversity among the colonised and non-colonised sites.
- Published
- 2022
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39. The ataxia-linked E1081Q mutation affects the sub-plasma membrane Ca2+-microdomains by tuning PMCA3 activity
- Author
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Vallese, Francesca, Maso, Lorenzo, Giamogante, Flavia, Poggio, Elena, Barazzuol, Lucia, Salmaso, Andrea, Lopreiato, Raffaele, Cendron, Laura, Navazio, Lorella, Zanni, Ginevra, Weber, Yvonne, Kovacevic-Preradovic, Tatjana, Keren, Boris, Torraco, Alessandra, Carrozzo, Rosalba, Peretto, Francesco, Peggion, Caterina, Ferro, Stefania, Marin, Oriano, Zanotti, Giuseppe, Calì, Tito, Brini, Marisa, and Carafoli, Ernesto
- Published
- 2022
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- View/download PDF
40. A Novel NUTM1-NSMCE2 Fusion Gene in a Pediatric Chest NUT Carcinoma
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De Leonardis, Francesco, primary, Greco Miani, Vittorio, additional, Vallese, Silvia, additional, Barresi, Sabina, additional, Marulli, Giuseppe, additional, Novielli, Chiara, additional, Dall’Igna, Patrizia, additional, Maruccia, Michele, additional, and Santoro, Nicola, additional
- Published
- 2024
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41. Epstein–Barr virus‐associated smooth muscle tumor in a female with ataxia telangiectasia: A case report
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Rivalta, Beatrice, primary, Zangari, Paola, additional, Pacillo, Lucia, additional, Manno, Emma Concetta, additional, Santilli, Veronica, additional, Rotulo, Gioacchino Andrea, additional, Cotugno, Nicola, additional, Rossetti, Chiara, additional, Vallese, Silvia, additional, Paglietti, Maria Giovanna, additional, Tomà, Paolo, additional, Pardi, Valerio, additional, Inserra, Alessandro, additional, Francalanci, Paola, additional, Milano, Giuseppe Maria, additional, Alaggio, Rita, additional, Cancrini, Caterina, additional, Finocchi, Andrea, additional, Palma, Paolo, additional, and Amodio, Donato, additional
- Published
- 2024
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42. ER-Mitochondria Calcium Transfer, Organelle Contacts and Neurodegenerative Diseases
- Author
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Vallese, Francesca, Barazzuol, Lucia, Maso, Lorenzo, Brini, Marisa, Calì, Tito, Cohen, Irun R., Editorial Board Member, Lajtha, Abel, Editorial Board Member, Lambris, John D., Series Editor, Paoletti, Rodolfo, Editorial Board Member, Rezaei, Nima, Series Editor, and Islam, Md. Shahidul, editor
- Published
- 2020
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43. Notulae to the Italian flora of algae, bryophytes, fungi and lichens: 12
- Author
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Sonia Ravera, Marta Puglisi, Alfredo Vizzini, Silvia Assini, Matteo Barcella, Gabriele Berta, Fabrizio Boccardo, Ilaria Bonini, Francesca Bottegoni, Romina Ciotti, Marco Clericuzio, Annalena Cogoni, Davide Dagnino, Antonio De Agostini, Antonio B. De Giuseppe, Francesco Dovana, Gabriele Gheza, Deborah Isocrono, Giovanni Maiorca, Mauro Mariotti, Juri Nascimbene, Pier Luigi Nimis, Silvia Ongaro, Giulio Pandeli, Nicodemo G. Passalacqua, Giovanna Pezzi, Silvia Poponessi, Filippo Prosser, Domenico Puntillo, Michele Puntillo, Giovanni Sicoli, Claudia Turcato, and Chiara Vallese
- Subjects
Botany ,QK1-989 - Abstract
In this contribution, new data concerning bryophytes, fungi and lichens of the Italian flora are presented. It includes new records, confirmations or exclusions for the bryophyte genera Acaulon, Campylopus, Entosthodon, Homomallium, Pseudohygrohypnum, and Thuidium, the fungal genera Entoloma, Cortinarius, Mycenella, Oxyporus, and Psathyrella and the lichen genera Anaptychia, Athallia, Baeomyces, Bagliettoa, Calicium, Nephroma, Pectenia, Phaeophyscia, Polyblastia, Protoparmeliopsis, Pyrenula, Ramalina, and Sanguineodiscus.
- Published
- 2021
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- View/download PDF
44. Exploiting a gradient kinetics and color histogram in a single picture to second order digital imaging data acquisition with MCR-ALS for the arsenic quantification in water
- Author
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Vallese, Federico Danilo, Belén, Federico, Messina, Paula Verónica, de Araújo Gomes, Adriano, and Pistonesi, Marcelo Fabian
- Published
- 2021
- Full Text
- View/download PDF
45. Ubiquitination as a key regulatory mechanism for O3-induced cutaneous redox inflammasome activation
- Author
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Francesca Ferrara, Valeria Cordone, Alessandra Pecorelli, Mascia Benedusi, Erika Pambianchi, Anna Guiotto, Andrea Vallese, Franco Cervellati, and Giuseppe Valacchi
- Subjects
Inflammasomes ,OxInflammation ,Proteasome ,UBR2 ,N-end rule pathway ,Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
NLRP1 is one of the major inflammasomes modulating the cutaneous inflammatory responses and therefore linked to a variety of cutaneous conditions. Although NLRP1 has been the first inflammasome to be discovered, only in the past years a significant progress was achieved in understanding the molecular mechanism and the stimuli behind its activation. In the past decades a crescent number of studies have highlighted the role of air pollutants as Particulate Matter (PM), Cigarette Smoke (CS) and Ozone (O3) as trigger stimuli for inflammasomes activation, especially via Reactive Oxygen Species (ROS) mediators. However, whether NLRP1 can be modulated by air pollutants via oxidative stress and the mechanism behind its activation is still poorly understood. Here we report for the first time that O3, one of the most toxic pollutants, activates the NLRP1 inflammasome in human keratinocytes via oxidative stress mediators as hydrogen peroxide (H2O2) and 4-hydroxy-nonenal (4HNE). Our data suggest that NLRP1 represents a target protein for 4HNE adduction that possibly leads to its proteasomal degradation and activation via the possible involvement of E3 ubiquitin ligase UBR2. Of note, Catalase (Cat) treatment prevented inflammasome assemble and inflammatory cytokines release as well as NLRP1 ubiquitination in human keratinocytes upon O3 exposure.The present work is a mechanistic study that follows our previous work where we have showed the ability of O3 to induce cutaneous inflammasome activation in humans exposed to this pollutant. In conclusion, our results suggest that O3 triggers the cutaneous NLRP1 inflammasome activation by ubiquitination and redox mechanism.
- Published
- 2022
- Full Text
- View/download PDF
46. Validation of the binding stoichiometry between HCN channels and their neuronal regulator TRIP8b by single molecule measurements
- Author
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Andrea Saponaro, Francesca Vallese, Alessandro Porro, and Oliver B. Clarke
- Subjects
HCN channels ,Ih current ,TRIP8b ,cAMP ,mass photometry ,stoichiometry ,Physiology ,QP1-981 - Abstract
Tetratricopeptide repeat–containing Rab8b-interacting (TRIP8b) protein is a brain-specific subunit of Hyperpolarization-activated Cyclic Nucleotide-gated (HCN) channels, a class of voltage-gated channels modulated by cyclic nucleotides. While the interaction between TRIP8b and the cytosolic C terminus of the channel has been structurally described, the HCN:TRIP8b stoichiometry is less characterized. We employed single molecule mass photometry (MP) to image HCN4 particles purified in complex with TRIP8b. Our data show that four TRIP8b subunits are bound to the tetrameric HCN4 particle, confirming a 1:1 stoichiometry.
- Published
- 2022
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47. Structural and functional mechanisms of anti-NMDAR autoimmune encephalitis
- Author
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Michalski, Kevin, Abdulla, Taha, Kleeman, Sam, Schmidl, Lars, Gómez García, Ricardo, Simorowski, Noriko, Vallese, Francesca, Prüss, Harald, Heckmann, Manfred, Geis, Christian, Furukawa, Hiro, Michalski, Kevin, Abdulla, Taha, Kleeman, Sam, Schmidl, Lars, Gómez García, Ricardo, Simorowski, Noriko, Vallese, Francesca, Prüss, Harald, Heckmann, Manfred, Geis, Christian, and Furukawa, Hiro
- Abstract
Autoantibodies against neuronal membrane proteins can manifest in autoimmune encephalitis, inducing seizures, cognitive dysfunction and psychosis. Anti-N-methyl-d-aspartate receptor (NMDAR) encephalitis is the most dominant autoimmune encephalitis; however, insights into how autoantibodies recognize and alter receptor functions remain limited. Here we determined structures of human and rat NMDARs bound to three distinct patient-derived antibodies using single-particle electron cryo-microscopy. These antibodies bind different regions within the amino-terminal domain of the GluN1 subunit. Through electrophysiology, we show that all three autoantibodies acutely and directly reduced NMDAR channel functions in primary neurons. Antibodies show different stoichiometry of binding and antibody–receptor complex formation, which in one antibody, 003-102, also results in reduced synaptic localization of NMDARs. These studies demonstrate mechanisms of diverse epitope recognition and direct channel regulation of anti-NMDAR autoantibodies underlying autoimmune encephalitis., Depto. de Farmacología y Toxicología, Fac. de Medicina, TRUE, pub
- Published
- 2024
48. The lichens of the Majella National Park (Central Italy): an annotated checklist
- Author
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Gabriele Gheza, Luca Di Nuzzo, Chiara Vallese, Renato Benesperi, Elisabetta Bianchi, Valter Di Cecco, Luciano Di Martino, Paolo Giordani, Josef Hafellner, Helmut Mayrhofer, Pier Luigi Nimis, Mauro Tretiach, and Juri Nascimbene
- Subjects
Botany ,QK1-989 - Abstract
The botanical exploration of the Majella National Park has a long tradition dating back to the eighteenth century. However, the lichen biota of this area is still poorly investigated. To provide a baseline for future investigations, in this annotated checklist, we summarised all available information on the occurrence of lichens in the Majella National Park, retrieved from previous literature, herbarium material and original data produced by recent research. The checklist includes 342 infrageneric taxa. However, seven taxa are considered as dubious, thus setting the number of accepted taxa at 335, i.e. 45.8% of those currently known to occur in the Abruzzo Region. This checklist provides a baseline of the lichens known to occur in the Majella National Park, highlighting the potential of this area as a hotspot of lichen biodiversity, especially from a biogeographical point of view as indicated by the occurrence of several arctic-alpine species that form disjunct populations in the summit area of the massif.
- Published
- 2021
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49. Synovial Sarcoma of the Kidney: Diagnostic Pitfalls in a Case with Myxoid Monophasic Differentiation and No Epithelial Biomarkers Expression.
- Author
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Pagliuca, Francesca, Carraturo, Emma, De Chiara, Anna, Vallese, Silvia, Giovannoni, Isabella, Alaggio, Rita, Cannella, Lucia, Tafuto, Salvatore, and Franco, Renato
- Subjects
SYNOVIOMA ,SARCOMA ,SCIENTIFIC literature ,SYMPTOMS ,CHROMOSOMAL rearrangement - Abstract
Synovial sarcomas are soft tissue tumours of uncertain origin, most commonly found in the upper or lower extremities. They are characterised by distinctive chromosomal rearrangements involving the gene SS18. Synovial sarcomas can occasionally arise also in visceral sites, but retroperitoneal SSs are very unusual. Among them, a few primary renal synovial sarcomas have been described in the scientific literature. Primary renal synovial sarcomas tend to be monophasic and often show cystic changes. Histologically, they can closely resemble other primary kidney tumours, mainly paediatric tumours such as nephroblastoma and clear cell sarcoma of the kidney. In the current work, a primary synovial sarcoma of the kidney with unusual morphological features (extensively myxoid stroma and immunohistochemical positivity for BCOR) is described. Molecular analysis, through targeted RNA sequencing, was of invaluable help in reaching the correct diagnosis. Despite locally advanced disease at presentation, the patient showed an unexpectedly brilliant response to chemotherapy. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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- View/download PDF
50. RAF1 gene fusions are recurrent driver events in infantile fibrosarcoma‐like mesenchymal tumors.
- Author
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Motta, Marialetizia, Barresi, Sabina, Pizzi, Simone, Bifano, Delfina, Lopez Marti, Jennifer, Garrido‐Pontnou, Marta, Flex, Elisabetta, Bruselles, Alessandro, Giovannoni, Isabella, Rotundo, Giovannina, Fragale, Alessandra, Tirelli, Valentina, Vallese, Silvia, Ciolfi, Andrea, Bisogno, Gianni, Alaggio, Rita, and Tartaglia, Marco
- Subjects
GENE fusion ,CHIMERIC proteins ,GENE rearrangement ,HYPERACTIVITY ,CATALYTIC domains ,RECURRENT miscarriage - Abstract
Infantile fibrosarcomas (IFS) and congenital mesoblastic nephroma (CMN) are rare myofibroblastic tumors of infancy and early childhood commonly harboring the ETV6::NTRK3 gene fusion. IFS/CMN are considered as tumors with an 'intermediate prognosis' as they are locally aggressive, but rarely metastasize, and generally have a favorable outcome. A fraction of IFS/CMN‐related neoplasms are negative for the ETV6::NTRK3 gene rearrangement and are characterized by other chimeric proteins promoting MAPK signaling upregulation. In a large proportion of these tumors, which are classified as IFS‐like mesenchymal neoplasms, the contributing molecular events remain to be identified. Here, we report three distinct rearrangements involving RAF1 among eight ETV6::NTRK3 gene fusion‐negative tumors with an original histological diagnosis of IFS/CMN. The three fusion proteins retain the entire catalytic domain of the kinase. Two chimeric products, GOLGA4::RAF1 and LRRFIP2::RAF1, had previously been reported as driver events in different cancers, whereas the third, CLIP1::RAF1, represents a novel fusion protein. We demonstrate that CLIP1::RAF1 acts as a bona fide oncoprotein promoting cell proliferation and migration through constitutive upregulation of MAPK signaling. We show that the CLIP1::RAF1 hyperactive behavior does not require RAS activation and is mediated by constitutive 14‐3‐3 protein‐independent dimerization of the chimeric protein. As previously reported for the ETV6::NTRK3 fusion protein, CLIP1::RAF1 similarly upregulates PI3K‐AKT signaling. Our findings document that RAF1 gene rearrangements represent a recurrent event in ETV6::NTRK3‐negative IFS/CMN and provide a rationale for the use of inhibitors directed to suppress MAPK and PI3K‐AKT signaling in these cancers. © 2024 The Pathological Society of Great Britain and Ireland. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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