43 results on '"Urrutia, Alejandra"'
Search Results
2. The immune factors driving DNA methylation variation in human blood
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Bergstedt, Jacob, Azzou, Sadoune Ait Kaci, Tsuo, Kristin, Jaquaniello, Anthony, Urrutia, Alejandra, Rotival, Maxime, Lin, David T. S., MacIsaac, Julia L., Kobor, Michael S., Albert, Matthew L., Duffy, Darragh, Patin, Etienne, and Quintana-Murci, Lluís
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- 2022
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3. Distinctive roles of age, sex, and genetics in shaping transcriptional variation of human immune responses to microbial challenges
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Milieu Intérieur Consortium, Piasecka, Barbara, Duffy, Darragh, Urrutia, Alejandra, Quach, Hélène, Patin, Etienne, Posseme, Céline, Bergstedth, Jacob, Charbit, Bruno, Rouilly, Vincent, MacPherson, Cameron R., Hasan, Milena, Albaud, Benoit, Gentien, David, Fellay, Jacques, Albert, Matthew L., and Quintana-Murci, Lluis
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- 2018
4. Manejo clinico y profilactico de paciente portador de valvula ventriculoperitoneal (DVP)
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Gutiérrez Barragán, Katia Vianey, Grimaldo Urrutia, Alejandra, Macias Lamas, Nalleli Guadalupe, Rodarte Leos, Gabriela, and Chávez Maciel, José María
- Published
- 2018
5. Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors
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Patin, Etienne, Hasan, Milena, Bergstedt, Jacob, Rouilly, Vincent, Libri, Valentina, Urrutia, Alejandra, Alanio, Cécile, Scepanovic, Petar, Hammer, Christian, Jönsson, Friederike, Beitz, Benoît, Quach, Hélène, Lim, Yoong Wearn, Hunkapiller, Julie, Zepeda, Magge, Green, Cherie, Piasecka, Barbara, Leloup, Claire, Rogge, Lars, Huetz, François, Peguillet, Isabelle, Lantz, Olivier, Fontes, Magnus, Di Santo, James P., Thomas, Stéphanie, Fellay, Jacques, Duffy, Darragh, Quintana-Murci, Lluís, Albert, Matthew L., and The Milieu Intérieur Consortium
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- 2018
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6. Semi-automated and standardized cytometric procedures for multi-panel and multi-parametric whole blood immunophenotyping
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Hasan, Milena, Beitz, Benoit, Rouilly, Vincent, Libri, Valentina, Urrutia, Alejandra, Duffy, Darragh, Cassard, Lydie, Di Santo, James P., Mottez, Estelle, Quintana-Murci, Lluis, Albert, Matthew L., and Rogge, Lars
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- 2015
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7. Automated flow cytometric analysis across large numbers of samples and cell types
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Chen, Xiaoyi, Hasan, Milena, Libri, Valentina, Urrutia, Alejandra, Beitz, Benoît, Rouilly, Vincent, Duffy, Darragh, Patin, Étienne, Chalmond, Bernard, Rogge, Lars, Quintana-Murci, Lluis, Albert, Matthew L., and Schwikowski, Benno
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- 2015
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8. Development of an 18F-labeled anti-human CD8 VHH for same-day immunoPET imaging
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Sriraman, Shravan Kumar, primary, Davies, Christopher W., additional, Gill, Herman, additional, Kiefer, James R., additional, Yin, Jianping, additional, Ogasawara, Annie, additional, Urrutia, Alejandra, additional, Javinal, Vincent, additional, Lin, Zhonghua, additional, Seshasayee, Dhaya, additional, Abraham, Ryan, additional, Haas, Phil, additional, Koth, Christopher, additional, Marik, Jan, additional, Koerber, James T., additional, and Williams, Simon Peter, additional
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- 2022
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9. HIV Controllers Exhibit Potent CD8 T Cell Capacity to Suppress HIV Infection ex vivo and Peculiar Cytotoxic T Lymphocyte Activation Phenotype
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Sáez-Cirión, Asier, Lacabaratz, Christine, Lambotte, Olivier, Versmisse, Pierre, Urrutia, Alejandra, Boufassa, Faroudy, Barré-Sinoussi, Françoise, Delfraissy, Jean-François, Sinet, Martine, Pancino, Gianfranco, and Venet, Alain
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- 2007
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10. Factors Driving DNA Methylation Variation in Human Blood
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Bergstedt, Jacob, Azzou, Sadoune, Tsuo, Kristin, Jaquaniello, Anthony, Urrutia, Alejandra, Rotival, Maxime, Lin, David, MacIsaac, Julia, Kobor, Michael, Albert, Matthew, Duffy, Darragh, Patin, Etienne, Quintana-Murci, Lluís, Génétique Evolutive Humaine - Human Evolutionary Genetics, Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), Génomique évolutive, modélisation et santé (CNRS-UMR2000), Karolinska Institutet [Stockholm], Insitro [San Francisco], University of British Columbia (UBC), Immunologie Translationnelle - Translational Immunology lab, Institut Pasteur [Paris], Collège de France (CdF (institution)), Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Génomique évolutive, modélisation et santé (GEMS), and Institut Pasteur [Paris] (IP)-Université Paris Cité (UPCité)
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[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics - Abstract
Posté sur BioRxiv le 24 juin 2021; Epigenetic changes are required for normal development and health, and can also underlie disease states; yet, the nature and respective contribution of factors that drive epigenetic variation in humans remain to be fully characterized. Here, we assessed how the blood DNA methylome of 958 adults is affected by genetic variation, aging, sex and 139 diverse environmental exposures, and investigated whether these effects are direct or mediated by changes in cellular composition, measured by deep immunophenotyping. We show that cellular heterogeneity and DNA sequence variation are the strongest predictors of DNA methylation levels. We identify latent cytomegalovirus infection as a major driver of DNA methylation variation and delineate three distinct effects of aging on DNA methylation, including increased dispersion consistent with epigenetic drift. Our rich dataset provides a unique resource for the design and interpretation of epigenetic studies and highlight critical factors in medical epigenomics studies.
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- 2021
11. Development of an 18F-labeled anti-human CD8 VHH for same-day immunoPET imaging.
- Author
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Sriraman, Shravan Kumar, Davies, Christopher W., Gill, Herman, Kiefer, James R., Yin, Jianping, Ogasawara, Annie, Urrutia, Alejandra, Javinal, Vincent, Lin, Zhonghua, Seshasayee, Dhaya, Abraham, Ryan, Haas, Phil, Koth, Christopher, Marik, Jan, Koerber, James T., and Williams, Simon Peter
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EMISSION-computed tomography ,FLUORIDES ,CANCER immunotherapy ,MEDICAL imaging systems ,T cells - Abstract
Purpose: Cancer immunotherapies (CITs) have revolutionized the treatment of certain cancers, but many patients fail to respond or relapse from current therapies, prompting the need for new CIT agents. CD8
+ T cells play a central role in the activity of many CITs, and thus, the rapid imaging of CD8+ cells could provide a critical biomarker for new CIT agents. However, existing89 Zr-labeled CD8 PET imaging reagents exhibit a long circulatory half-life and high radiation burden that limit potential applications such as same-day and longitudinal imaging. Methods: To this end, we discovered and developed a 13-kDa single-domain antibody (VHH5v2) against human CD8 to enable high-quality, same-day imaging with a reduced radiation burden. To enable sensitive and rapid imaging, we employed a site-specific conjugation strategy to introduce an18 F radiolabel to the VHH. Results: The anti-CD8 VHH, VHH5v2, demonstrated binding to a membrane distal epitope of human CD8 with a binding affinity (KD ) of 500 pM. Subsequent imaging experiments in several xenografts that express varying levels of CD8 demonstrated rapid tumor uptake and fast clearance from the blood. High-quality images were obtained within 1 h post-injection and could quantitatively differentiate the tumor models based on CD8 expression level. Conclusion: Our work reveals the potential of this anti-human CD8 VHH [18 F]F-VHH5v2 to enable rapid and specific imaging of CD8+ cells in the clinic. [ABSTRACT FROM AUTHOR]- Published
- 2023
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12. Impact of Antiretroviral Therapy and Changes in Virus Load on Human Immunodeficiency Virus (HlV)-Specific T Cell Responses in Primary HIV Infection
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Lacabaratz-Porret, Christine, Urrutia, Alejandra, Doisne, Jean-Marc, Goujard, Cécile, Deveau, Christiane, Dalod, Marc, Meyer, Laurence, Rouzioux, Christine, Delfraissy, Jean-François, Venet, Alain, and Sinet, Martine
- Published
- 2003
13. Publisher Correction: Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors
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Patin, Etienne, Hasan, Milena, Bergstedt, Jacob, Rouilly, Vincent, Libri, Valentina, Urrutia, Alejandra, Alanio, Cécile, Scepanovic, Petar, Hammer, Christian, Jönsson, Friederike, Beitz, Benoît, Quach, Hélène, Lim, Yoong Wearn, Hunkapiller, Julie, Zepeda, Magge, Green, Cherie, Piasecka, Barbara, Leloup, Claire, Rogge, Lars, Huetz, François, Peguillet, Isabelle, Lantz, Olivier, Fontes, Magnus, Di Santo, James P., Thomas, Stéphanie, Fellay, Jacques, Duffy, Darragh, Quintana-Murci, Lluís, Albert, Matthew L., and The Milieu Intérieur Consortium
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- 2018
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14. Identification of a particular HIV-specific CD8+ T-cell subset with a CD27+ CD45RO−/RA+ phenotype and memory characteristics after initiation of HAART during acute primary HIV infection
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Lécuroux, Camille, Girault, Isabelle, Urrutia, Alejandra, Doisne, Jean-Marc, Deveau, Christiane, Goujard, Cécile, Meyer, Laurence, Sinet, Martine, and Venet, Alain
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- 2009
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15. Functional Analysis via Standardized Whole-Blood Stimulation Systems Defines the Boundaries of a Healthy Immune Response to Complex Stimuli
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Duffy, Darragh, Rouilly, Vincent, Libri, Valentina, Hasan, Milena, Beitz, Benoit, David, Mikael, Urrutia, Alejandra, Bisiaux, Aurélie, LaBrie, Samuel T., Dubois, Annick, Boneca, Ivo G., Delval, Cécile, Thomas, Stéphanie, Rogge, Lars, Schmolz, Manfred, Quintana-Murci, Lluis, and Albert, Matthew L.
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- 2014
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16. Antiretroviral therapy initiation during primary HIV infection enhances both CD127 expression and the proliferative capacity of HIV-specific CD8+ T cells
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Lécuroux, Camille, Girault, Isabelle, Boutboul, François, Urrutia, Alejandra, Goujard, Cécile, Meyer, Laurence, Lambotte, Olivier, Chaix, Marie-Laure, Martinez, Valérie, Autran, Brigitte, Sinet, Martine, and Venet, Alain
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- 2009
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17. Détermination à l’échelle d’une population de valeurs de référence de la réponse immunitaire en utilisant des outils standardisés
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Urrutia, Alejandra, Institut Pasteur [Paris] (IP), Immunobiologie des Cellules dendritiques, Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM), Université Pierre et Marie Curie - Paris VI, Matthew L. Albert, Darragh Duffy, and STAR, ABES
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Deconvoluting complex responses ,Cytokine gene signatures ,[SDV.IMM] Life Sciences [q-bio]/Immunology ,Immunité innée ,Immune phenotyping ,[SDV.IMM]Life Sciences [q-bio]/Immunology ,Immunophénotypage ,Dissection de réponses complexes ,Association génétique ,Cytomètrie en flux ,Réponse ARN aux cytokines - Abstract
The project Milieu Intérieur aims to study the genetic and environmental factors that can have a major impact on occurring immunological variance in healthy human population. This characterization requires the use of standardized immunophenotyping technologies for integrating diverse, complex datasets. With this goal in mind, we used an optimized suite of standardized whole-blood stimulation systems to study the human induced immune response in physiological condition and developed a unique standardized protocol to analyze the ARN signatures upon whole-blood stimulation to test the hypothesis that responses to complex stimuli can be defined by the transcriptional signatures of key cytokines. We found 44 genes, identified using Support Vector Machine learning, which captured the diversity of complex innate immune responses with improved segregation between distinct stimuli. This provides new strategies for dimension reduction of large datasets and for deconvolution of innate immune responses, applicable for characterizing novel immunomodulatory molecules.In a second related study, we aimed to identify the environmental and genetic factors driving innate and adaptive immune cell parameters in homeostatic conditions. To do so, we combined semi-automated flow cytometric analysis of blood leukocytes and genome-wide DNA genotyping in the 1,000 healthy donors included in the collection. We show that smoking, age, gender and latent cytomegalovirus infection, are main drivers of human variation (i.e. numbers of Treg and MAIT cells). These results demonstrated that innate cell parameters are strongly controlled by genetic factors, whereas adaptive cells are driven by life-long environmental exposures. In addition, to help on the public data mining, we developed interactive R-Shiny application including healthy donor reference values for both studies.All together, these results indicate that we developed powerful tools for human system biology approaches to support personalized medecine., Le projet Milieu Intérieur a pour but d'identifier les facteurs génétiques et environnementaux ayant un impact sur la variabilité immunitaire naturelle. Cette analyse multiparamétrique requière néanmoins d'utiliser des outils standardisés. Afin d'étudier la réponse immune induite, nous avons utilisé un système optimisé prêt à l'emploi de stimulation du sang et développé un protocole unique de quantification de l'ARN afin d'étudier la signature transcriptionnelle en réponse à des immuno-modulateurs. Testant l'hypothèse que la réponse à des composés complexes peut être définie par la signature ARN de cytokines clefs et utilisant une méthode statistique robuste, nous avons identifié 44 gènes capables d'optimiser la capture de la réponse à des stimulations plus complexes aidant à la réduction dimensionnelle pour la décomposition de réponses innées. Dans une seconde étude, l'analyse semi-automatisée par cytomètrie en flux des cellules du sang a été associée à l'analyse épidémiologique et génotypique pour les 1,000 donneurs inclus dans la cohorte. Nous avons observé que le tabac, l'âge, le genre et l'infection latente par le cytomégalovirus sont les facteurs impactant le plus la variabilité immunitaire. Cette étude a montré que les paramètres des cellules innées sont contrôlés par des facteurs génétiques alors que ceux des cellules adaptatives le sont plutôt par des expositions environnementales tout au long de la vie. Des outils interactifs incluant ces données de référence accompagnent ces études. Ces analyses montrent que nous avons développé des outils performants pour une étude intégrative du modèle humain constituant une approche innovante vers une médecine personnalisée.
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- 2017
18. Accurate prediction of cell composition, age, smoking consumption and infection serostatus based on blood DNA methylation profiles
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Bergstedt, Jacob, primary, Urrutia, Alejandra, additional, Duffy, Darragh, additional, Albert, Matthew L., additional, Quintana-Murci, Lluís, additional, and Patin, Etienne, additional
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- 2018
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19. Triggering of TLR‐3, ‐4, NOD2, and DC‐SIGN reduces viral replication and increases T‐cell activation capacity of HIV‐infected human dendritic cells
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Cardinaud, Sylvain, primary, Urrutia, Alejandra, additional, Rouers, Angeline, additional, Coulon, Pierre‐Grégoire, additional, Kervevan, Jérome, additional, Richetta, Clémence, additional, Bet, Anne, additional, Maze, Emmanuel A., additional, Larsen, Martin, additional, Iglesias, Maria‐Candela, additional, Appay, Victor, additional, Graff‐Dubois, Stéphanie, additional, and Moris, Arnaud, additional
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- 2017
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20. Standardized Whole-Blood Transcriptional Profiling Enables the Deconvolution of Complex Induced Immune Responses
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Urrutia, Alejandra, primary, Duffy, Darragh, additional, Rouilly, Vincent, additional, Posseme, Céline, additional, Djebali, Raouf, additional, Illanes, Gabriel, additional, Libri, Valentina, additional, Albaud, Benoit, additional, Gentien, David, additional, Piasecka, Barbara, additional, Hasan, Milena, additional, Fontes, Magnus, additional, Quintana-Murci, Lluis, additional, Albert, Matthew L., additional, Abel, Laurent, additional, Alcover, Andres, additional, Astrom, Kalla, additional, Bousso, Philippe, additional, Bruhns, Pierre, additional, Cumano, Ana, additional, Demangel, Caroline, additional, Deriano, Ludovic, additional, Di Santo, James, additional, Dromer, Françoise, additional, Eberl, Gérard, additional, Enninga, Jost, additional, Fellay, Jacques, additional, Freitas, Antonio, additional, Gelpi, Odile, additional, Gomperts-Boneca, Ivo, additional, Hercberg, Serge, additional, Lantz, Olivier, additional, Leclerc, Claude, additional, Mouquet, Hugo, additional, Pellegrini, Sandra, additional, Pol, Stanislas, additional, Rogge, Lars, additional, Sakuntabhai, Anavaj, additional, Schwartz, Olivier, additional, Schwikowski, Benno, additional, Shorte, Spencer, additional, Soumelis, Vassili, additional, Tangy, Frédéric, additional, Tartour, Eric, additional, Toubert, Antoine, additional, and Ungeheuer, Marie-Noëlle, additional
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- 2016
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21. HIV-Infected Dendritic Cells Present Endogenous MHC Class II–Restricted Antigens to HIV-Specific CD4+ T Cells
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Coulon, Pierre-Grégoire, primary, Richetta, Clémence, additional, Rouers, Angéline, additional, Blanchet, Fabien P., additional, Urrutia, Alejandra, additional, Guerbois, Mathilde, additional, Piguet, Vincent, additional, Theodorou, Ioannis, additional, Bet, Anne, additional, Schwartz, Olivier, additional, Tangy, Frédéric, additional, Graff-Dubois, Stéphanie, additional, Cardinaud, Sylvain, additional, and Moris, Arnaud, additional
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- 2016
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22. Human thymopoiesis is influenced by a common genetic variant within the TCRA-TCRD locus.
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Clave, Emmanuel, Araujo, Itauá Leston, Alanio, Cécile, Patin, Etienne, Bergstedt, Jacob, Urrutia, Alejandra, Lopez-Lastra, Silvia, Li, Yan, Charbit, Bruno, MacPherson, Cameron Ross, Hasan, Milena, Melo-Lima, Breno Luiz, Douay, Corinne, Saut, Noémie, Germain, Marine, Trégouët, David-Alexandre, Morange, Pierre-Emmanuel, Fontes, Magnus, Duffy, Darragh, and Di Santo, James P.
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HUMAN genetic variation ,T cell receptors ,LABORATORY mice ,HUMAN gene mapping ,HUMAN genome - Abstract
Aging, sex, and genetics substantially affect human thymic function. Mining the Milieu Intérieur: Personalized medicine partly depends on understanding what causes variance even outside the context of overt disease. The Milieu Intérieur Consortium enrolled 1000 healthy adults to study how genetics and the environment influence the immune system. Clave et al. leveraged samples from this cohort to see how thymic output, known to decrease over time, is affected by other factors. In addition to seeing sex-dependent differences, a genome-wide association study revealed variants that were associated with thymic output, which was confirmed in an independent cohort and mouse models. The authors have also developed a Web application for other investigators to examine the Milieu Intérieur data. The thymus is the primary lymphoid organ where naïve T cells are generated; however, with the exception of age, the parameters that govern its function in healthy humans remain unknown. We characterized the variability of thymic function among 1000 age- and sex-stratified healthy adults of the Milieu Intérieur cohort, using quantification of T cell receptor excision circles (TRECs) in peripheral blood T cells as a surrogate marker of thymopoiesis. Age and sex were the only nonheritable factors identified that affect thymic function. TREC amounts decreased with age and were higher in women compared to men. In addition, a genome-wide association study revealed a common variant (rs2204985) within the T cell receptor TCRA-TCRD locus, between the DD2 and DD3 gene segments, which associated with TREC amounts. Strikingly, transplantation of human hematopoietic stem cells with the rs2204985 GG genotype into immunodeficient mice led to thymopoiesis with higher TRECs, increased thymocyte counts, and a higher TCR repertoire diversity. Our population immunology approach revealed a genetic locus that influences thymopoiesis in healthy adults, with potentially broad implications in precision medicine. [ABSTRACT FROM AUTHOR]
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- 2018
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23. Distinctive roles of age, sex, and genetics in shaping transcriptional variation of human immune responses to microbial challenges.
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Piasecka, Barbara, Quach, Hélène, Patin, Etienne, Quintana-Murci, Lluis, Albaud, Benoit, Gentien, David, Fellay, Jacques, Posseme, Céline, Charbit, Bruno, Rouilly, Vincent, MacPherson, Cameron R., Hasan, Milena, Duffy, Darragh, Albert, Matthew L., Urrutia, Alejandra, and Bergstedt, Jacob
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IMMUNE response ,GENE expression ,GENETICS ,HUMAN sexuality ,AGE - Abstract
The contribution of host genetic and nongenetic factors to immunological differences in humans remains largely undefined. Here, we generated bacterial-, fungal-, and viral-induced immune transcriptional profiles in an age- and sex-balanced cohort of 1,000 healthy individuals and searched for the determinants of immune response variation. We found that age and sex affected the transcriptional response of most immune-related genes, with age effects being more stimulus-specific relative to sex effects, which were largely shared across conditions. Although specific cell populations mediated the effects of age and sex on gene expression, including CD8
+ T cells for age and CD4+ T cells and monocytes for sex, we detected a direct effect of these intrinsic factors for the majority of immune genes. The mapping of expression quantitative trait loci (eQTLs) revealed that genetic factors had a stronger effect on immune gene regulation than age and sex, yet they affected a smaller number of genes. Importantly, we identified numerous genetic variants that manifested their regulatory effects exclusively on immune stimulation, including a Candida albicans-specific master regulator at the CR1 locus. These response eQTLs were enriched in disease-associated variants, particularly for autoimmune and inflammatory disorders, indicating that differences in disease risk may result from regulatory variants exerting their effects only in the presence of immune stress. Together, this study quantifies the respective effects of age, sex, genetics, and cellular heterogeneity on the interindividual variability of immune responses and constitutes a valuable resource for further exploration in the context of different infection risks or disease outcomes. [ABSTRACT FROM AUTHOR]- Published
- 2018
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24. HIV-Infected Spleens Present Altered Follicular Helper T Cell (Tfh) Subsets and Skewed B Cell Maturation
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Colineau, Lucie, primary, Rouers, Angeline, additional, Yamamoto, Takuya, additional, Xu, Yin, additional, Urrutia, Alejandra, additional, Pham, Hang-Phuong, additional, Cardinaud, Sylvain, additional, Samri, Assia, additional, Dorgham, Karim, additional, Coulon, Pierre-Grégoire, additional, Cheynier, Rémi, additional, Hosmalin, Anne, additional, Oksenhendler, Eric, additional, Six, Adrien, additional, Kelleher, Anthony D., additional, Zaunders, John, additional, Koup, Richard A., additional, Autran, Brigitte, additional, Moris, Arnaud, additional, and Graff-Dubois, Stéphanie, additional
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- 2015
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25. CD4 responses in HIV controllers
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Potter, Simon J, Lacabaratz, Christine, Lambotte, Olivier, Perez-Patrigeon, Santiago, Vingert, Benoît, Sinet, Martine, Colle, Jean-Hervé, Urrutia, Alejandra, Scott-Algara, Daniel, Boufassa, Faroudy, Delfraissy, Jean-François, Thèze, Jacques, Venet, Alain, Chakrabarti, Lisa A, Immunogénétique Cellulaire, Institut Pasteur [Paris], Immunologie antivirale systémique et cérébrale, Université Paris-Sud - Paris 11 (UP11)-IFR93-Institut National de la Santé et de la Recherche Médicale (INSERM), Service de médecine interne et maladies infectieuses, Université Paris-Sud - Paris 11 (UP11)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Hôpital Bicêtre, Régulation des Infections Rétrovirales, Santé reproductive, sexualité, infection à VIH - épidémiologie, démographie, sciences sociales, Institut national d'études démographiques (INED)-Université Paris-Sud - Paris 11 (UP11)-Institut National de la Santé et de la Recherche Médicale (INSERM), and Institut Pasteur [Paris] (IP)
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CD4+ T cell ,[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology ,HIV ,HIV controllers ,central memory - Abstract
International audience; Human immunodeficiency virus (HIV) controllers are rare individuals who spontaneously control HIV type 1 replication for 10 years or more in the absence of antiretroviral treatment. In the present study, HIV controllers (n = 11) maintained potent HIV-specific CD4 responses in spite of very low antigenic loads. Their CD4(+) central memory T (T(CM)) cells were characterized by near-normal numbers and preserved interleukin-2 (IL-2) secretion in response to HIV antigens and uniformly high expression of the survival receptor IL-7 receptor alpha (IL-7Ralpha). Controllers expressed CCR7 at higher levels than uninfected controls, suggesting differences in T(CM)-cell homing patterns. CD4(+) effector memory T (T(EM))-cell responses were polyfunctional in HIV controllers, while IL-2 secretion was lost in viremic patients. Cytokine production was three times higher in controllers than in treated patients with undetectable viral loads, suggesting an intrinsically more efficient response in the former group. The total CD4(+) T(EM)-cell pool underwent immune activation in controllers, as indicated by increased HLA-DR expression, decreased IL-7Ralpha expression, a bias towards gamma interferon production upon polyclonal stimulation, and increased macrophage inflammatory protein 1beta secretion associated with chronic CCR5 down-regulation. Thus, HIV controllers showed a preserved CD4(+) T(CM)-cell compartment and signs of potent functional activation in the CD4(+) T(EM)-cell compartment. While controllers did not show the generalized immune activation pattern associated with disease progression, they had signs of immune activation restricted to the effector compartment. These findings suggest the induction of an efficient, nondetrimental type of immune activation in patients who spontaneously control HIV.
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- 2007
26. Differential Impact of Age and Cytomegalovirus Infection on the γδ T Cell Compartment.
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Roux, Antoine, Mourin, Gisèle, Larsen, Martin, Fastenackels, Solène, Urrutia, Alejandra, Gorochov, Guy, Autran, Brigitte, Donner, Catherine, Sidi, Daniel, Sibony-Prat, Joyce, Marchant, Arnaud, Stern, Marc, Sauce, Delphine, Appay, Victor, Roux, Antoine, Mourin, Gisèle, Larsen, Martin, Fastenackels, Solène, Urrutia, Alejandra, Gorochov, Guy, Autran, Brigitte, Donner, Catherine, Sidi, Daniel, Sibony-Prat, Joyce, Marchant, Arnaud, Stern, Marc, Sauce, Delphine, and Appay, Victor
- Abstract
γδ T cells represent a subset of unconventional T lymphocytes that are known for their reactivity against different pathogens and considered as intermediate mediators between adaptive and innate immunity. We provide in this paper further insights underlying the changes that affect the γδ T cell compartment with advanced age in humans. We show that both aging and CMV infection impact independently on the γδ T cell compartment. Most γδ T cells are significantly affected by age and present a decreased frequency in the elderly. The decline of the γδ T cell pool appears to be independent from the activity of the thymus, arguing in favor of an extrathymic site of γδ T cell production in humans. Of note, CMV infection, which is directly associated with the activation of the pool of Vδ2(-) γδ T cells, promotes nonetheless the inflation of this compartment throughout life. CMV seropositivity accentuates further the accumulation of highly differentiated lymphocytes in Vδ2(-) γδ T cell subsets with time, in contrast to Vδ2(+) γδ T cells, which maintain a less differentiated phenotype. This is similar to the effect of CMV on αβ T cells and suggests that γδ T cells may vary in differentiation phenotype according to distinct stimuli or pathogens., JOURNAL ARTICLE, SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2013
27. Differential Impact of Age and Cytomegalovirus Infection on the γδ T Cell Compartment
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Roux, Antoine, primary, Mourin, Gisèle, additional, Larsen, Martin, additional, Fastenackels, Solène, additional, Urrutia, Alejandra, additional, Gorochov, Guy, additional, Autran, Brigitte, additional, Donner, Catherine, additional, Sidi, Daniel, additional, Sibony-Prat, Joyce, additional, Marchant, Arnaud, additional, Stern, Marc, additional, Sauce, Delphine, additional, and Appay, Victor, additional
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- 2013
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28. HIV-1 Capture and Antigen Presentation by Dendritic Cells: Enhanced Viral Capture Does Not Correlate with Better T Cell Activation
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Rodriguez-Plata, Maria T., primary, Urrutia, Alejandra, additional, Cardinaud, Sylvain, additional, Buzón, Maria J., additional, Izquierdo-Useros, Nuria, additional, Prado, Julia G., additional, Puertas, Maria C., additional, Erkizia, Itziar, additional, Coulon, Pierre-Grégoire, additional, Cedeño, Samandhy, additional, Clotet, Bonaventura, additional, Moris, Arnaud, additional, and Martinez-Picado, Javier, additional
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- 2012
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29. Escape from highly effective public CD8+ T-cell clonotypes by HIV
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Iglesias, Maria Candela, primary, Almeida, Jorge R., additional, Fastenackels, Solène, additional, van Bockel, David J., additional, Hashimoto, Masao, additional, Venturi, Vanessa, additional, Gostick, Emma, additional, Urrutia, Alejandra, additional, Wooldridge, Linda, additional, Clement, Mathew, additional, Gras, Stéphanie, additional, Wilmann, Pascal G., additional, Autran, Brigitte, additional, Moris, Arnaud, additional, Rossjohn, Jamie, additional, Davenport, Miles P., additional, Takiguchi, Masafumi, additional, Brander, Christian, additional, Douek, Daniel C., additional, Kelleher, Anthony D., additional, Price, David A., additional, and Appay, Victor, additional
- Published
- 2011
- Full Text
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30. CTL Escape Mediated by Proteasomal Destruction of an HIV-1 Cryptic Epitope
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Cardinaud, Sylvain, primary, Consiglieri, Gesa, additional, Bouziat, Romain, additional, Urrutia, Alejandra, additional, Graff-Dubois, Stéphanie, additional, Fourati, Slim, additional, Malet, Isabelle, additional, Guergnon, Julien, additional, Guihot, Amélie, additional, Katlama, Christine, additional, Autran, Brigitte, additional, van Endert, Peter, additional, Lemonnier, François A., additional, Appay, Victor, additional, Schwartz, Olivier, additional, Kloetzel, Peter M., additional, and Moris, Arnaud, additional
- Published
- 2011
- Full Text
- View/download PDF
31. Increased CD127 expression on activated FOXP3+CD4+ regulatory T cells
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Simonetta, Federico, primary, Chiali, Amel, additional, Cordier, Corinne, additional, Urrutia, Alejandra, additional, Girault, Isabelle, additional, Bloquet, Stéphane, additional, Tanchot, Corinne, additional, and Bourgeois, Christine, additional
- Published
- 2010
- Full Text
- View/download PDF
32. Effect of methotrexate and anti-TNF on Epstein-Barr virus T-cell response and viral load in patients with rheumatoid arthritis or spondylarthropathies
- Author
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Miceli-Richard, Corinne, primary, Gestermann, Nicolas, additional, Amiel, Corinne, additional, Sellam, Jérémie, additional, Ittah, Marc, additional, Pavy, Stephan, additional, Urrutia, Alejandra, additional, Girauld, Isabelle, additional, Carcelain, Guislaine, additional, Venet, Alain, additional, and Mariette, Xavier, additional
- Published
- 2009
- Full Text
- View/download PDF
33. Preserved Central Memory and Activated Effector Memory CD4 + T-Cell Subsets in Human Immunodeficiency Virus Controllers: an ANRS EP36 Study
- Author
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Potter, Simon J., primary, Lacabaratz, Christine, additional, Lambotte, Olivier, additional, Perez-Patrigeon, Santiago, additional, Vingert, Benoît, additional, Sinet, Martine, additional, Colle, Jean-Hervé, additional, Urrutia, Alejandra, additional, Scott-Algara, Daniel, additional, Boufassa, Faroudy, additional, Delfraissy, Jean-François, additional, Thèze, Jacques, additional, Venet, Alain, additional, and Chakrabarti, Lisa A., additional
- Published
- 2007
- Full Text
- View/download PDF
34. CD8+ T Cells Specific for EBV, Cytomegalovirus, and Influenza Virus Are Activated during Primary HIV Infection
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Doisne, Jean-Marc, primary, Urrutia, Alejandra, additional, Lacabaratz-Porret, Christine, additional, Goujard, Cécile, additional, Meyer, Laurence, additional, Chaix, Marie-Laure, additional, Sinet, Martine, additional, and Venet, Alain, additional
- Published
- 2004
- Full Text
- View/download PDF
35. Escape from highly effective public CD8+T-cell clonotypes by HIV
- Author
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Iglesias, Maria Candela, Almeida, Jorge R., Fastenackels, Solène, van Bockel, David J., Hashimoto, Masao, Venturi, Vanessa, Gostick, Emma, Urrutia, Alejandra, Wooldridge, Linda, Clement, Mathew, Gras, Stéphanie, Wilmann, Pascal G., Autran, Brigitte, Moris, Arnaud, Rossjohn, Jamie, Davenport, Miles P., Takiguchi, Masafumi, Brander, Christian, Douek, Daniel C., Kelleher, Anthony D., Price, David A., and Appay, Victor
- Abstract
Mapping the precise determinants of T-cell efficacy against viruses in humans is a public health priority with crucial implications for vaccine design. To inform this effort, we performed a comprehensive analysis of the effective CD8+T-cell clonotypes that constitute responses specific for the HIV p24 Gag-derived KK10 epitope (KRWIILGLNK; residues 263-272) restricted by HLA-B*2705, which are known to confer superior control of viral replication in HIV-infected individuals. Particular KK10-specific CD8+T-cell clonotypes, characterized by TRBV4-3/TRBJ1-3gene rearrangements, were found to be preferentially selected in vivo and shared between individuals. These “public” clonotypes exhibit high levels of TCR avidity and Ag sensitivity, which impart functional advantages and enable effective suppression of HIV replication. The early L268M mutation at position 6 of the KK10 epitope enables the virus to avoid recognition by these highly effective CD8+T-cell clonotypes. However, alternative clonotypes with variant reactivity provide flexibility within the overall KK10-specific response. These findings provide refined mechanistic insights into the workings of an effective CD8+T-cell response against HIV.
- Published
- 2011
- Full Text
- View/download PDF
36. Identification of a particular HIV-specific CD8+T-cell subset with a CD27+CD45RO−/RA+phenotype and memory characteristics after initiation of HAART during acute primary HIV infection
- Author
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Lécuroux, Camille, Girault, Isabelle, Urrutia, Alejandra, Doisne, Jean-Marc, Deveau, Christiane, Goujard, Cécile, Meyer, Laurence, Sinet, Martine, and Venet, Alain
- Abstract
CD8+T cells play an important role in controlling viral infections. Defective CD8+T-cell responses during HIV infection could contribute to viral persistence. Early initiation of highly active antiretroviral therapy during acute primary HIV infection helps to preserve HIV-specific immune responses. Here, we describe a particular CD27+CD45RO−/RA+HIV-specific CD8+T cell in participants treated early during the primary infection. These cells, which were present at a very low frequency during primary HIV infection, increased markedly after early treatment, whereas their frequency remained unchanged in untreated participants and in participants treated later. These nonnaive antigen-experienced cells are in a resting state and have characteristics of long-lived memory cells. They also possess direct effector capabilities, such as cytokine production, and are able to proliferate and to acquire cytotoxic functions on reactivation. Our results suggest that these HIV-specific CD27+CD45RO−/RA+CD8+T cells, observed when early viral replication is inhibited, form a pool of resting cells with memory characteristics.
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- 2009
- Full Text
- View/download PDF
37. Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors
- Author
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Patin, Etienne, Hasan, Milena, Bergstedt, Jacob, Rouilly, Vincent, Libri, Valentina, Urrutia, Alejandra, Alanio, Cécile, Scepanovic, Petar, Hammer, Christian, Jönsson, Friederike, Beitz, Benoît, Quach, Hélène, Lim, Yoong Wearn, Hunkapiller, Julie, Zepeda, Magge, Green, Cherie, Piasecka, Barbara, Leloup, Claire, Rogge, Lars, Huetz, François, Peguillet, Isabelle, Lantz, Olivier, Fontes, Magnus, Di Santo, James P., Thomas, Stéphanie, Fellay, Jacques, Duffy, Darragh, Quintana-Murci, Lluís, and Albert, Matthew L.
38. HIV-Infected Dendritic Cells Present Endogenous MHC Class II-Restricted Antigens to HIV-Specific CD4+ T Cells.
- Author
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Coulon, Pierre-Grégoire, Richetta, Clémence, Rouers, Angéline, Blanchet, Fabien P., Urrutia, Alejandra, Guerbois, Mathilde, Piguet, Vincent, Theodorou, Ioannis, Bet, Anne, Schwartz, Olivier, Tangy, Frédéric, Graff-Dubois, Stéphanie, Cardinaud, Sylvain, and Moris, Arnaud
- Subjects
- *
CD4 antigen , *T cells , *PEPTIDES , *PROTEIN research , *DENDRITIC cells - Abstract
It is widely assumed that CD4+ T cells recognize antigenic peptides (epitopes) derived solely from incoming, exogenous, viral particles or proteins. However, alternative sources of MHC class II (MHC-II)-restricted Ags have been described, in particular epitopes derived from newly synthesized proteins (so-called endogenous). In this study, we show that HIV-infected dendritic cells (DC) present MHC-II-restricted endogenous viral Ags to HIV-specific (HS) CD4+ T cells. This endogenous pathway functions independently of the exogenous route for HIV Ag presentation and offers a distinct possibility for the immune system to activate HS CD4+ T cells. We examined the implication of autophagy, which plays a crucial role in endogenous viral Ag presentation and thymic selection of CD4+ T cells, in HIV endogenous presentation. We show that infected DC do not use autophagy to process MHC-II-restricted HIV Ags. This is unlikely to correspond to a viral escape from autophagic degradation, as infecting DC with Nef- or Env-deficient HIV strains did not impact HS T cell activation. However, we demonstrate that, in DC, specific targeting of HIV Ags to autophagosomes using a microtubule-associated protein L chain 3 (LC3) fusion protein effectively enhances and broadens HS CD4+ T cell responses, thus favoring an endogenous MHC-II-restricted presentation. In summary, in DC, multiple endogenous presentation pathways lead to the activation of HS CD4+ T cell responses. These findings will help in designing novel strategies to activate HS CD4+ T cells that are required for CTL activation/maintenance and B cell maturation. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
39. Escape from highly effective public CD8+ T-cell clonotypes by HIV.
- Author
-
Iglesias, Maria Candela, Almeida, Jorge R., Fastenackels, Solène, van Bockel, David J., Hashimoto, Masao, Venturi, Vanessa, Gostick, Emma, Urrutia, Alejandra, Wooldridge, Linda, Clement, Mathew, Gras, Stéphanie, Wilmann, Pascal G., Autran, Brigitte, Moris, Arnaud, Rossjohn, Jamie, Davenport, Miles P., Takiguchi, Masafumi, Brander, Christian, Douek, Daniel C., and Kelleher, Anthony D.
- Subjects
- *
GENE mapping , *PUBLIC health , *T-cell receptor genes , *INTERLEUKIN-5 , *AIDS vaccines , *EPITOPES , *GENE rearrangement - Abstract
Mapping the precise determinants of T-cell efficacy against viruses in humans is a public health priority with crucial implications for vaccine design. To inform this effort, we performed a comprehensive analysis of the effective CD8+ T-cell clonotypes that constitute responses specific for the HIV p24 Gag-derived KK10 epitope (KRWIILGLNK; residues 263-272) restricted by HLA-B*2705, which are known to confer superior control of viral replication in HIV-infected individuals. Particular KK10-specific CD8+ T-cell clonotypes, characterized by TRBV4-3/TRBJ1-3 gene rearrangements, were found to be preferentially selected in vivo and shared between individuals. These "public" clonotypes exhibit high levels of TCR avidity and Ag sensitivity, which impart functional advantages and enable effective suppression of HIV replication. The early L268M mutation at position 6 of the KK10 epitope enables the virus to avoid recognition by these highly effective CD8+ T-cell clonotypes. However, alternative clonotypes with variant reactivity provide flexibility within the overall KK10-specific response. These findings provide refined mechanistic insights into the workings of an effective CD8+ T-cell response against HIV. [ABSTRACT FROM AUTHOR]
- Published
- 2011
- Full Text
- View/download PDF
40. Standardized Whole-Blood Transcriptional Profiling Enables the Deconvolution of Complex Induced Immune Responses
- Author
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Alejandra Urrutia, Darragh Duffy, Vincent Rouilly, Céline Posseme, Raouf Djebali, Gabriel Illanes, Valentina Libri, Benoit Albaud, David Gentien, Barbara Piasecka, Milena Hasan, Magnus Fontes, Lluis Quintana-Murci, Matthew L. Albert, Laurent Abel, Andres Alcover, Kalla Astrom, Philippe Bousso, Pierre Bruhns, Ana Cumano, Caroline Demangel, Ludovic Deriano, James Di Santo, Françoise Dromer, Gérard Eberl, Jost Enninga, Jacques Fellay, Antonio Freitas, Odile Gelpi, Ivo Gomperts-Boneca, Serge Hercberg, Olivier Lantz, Claude Leclerc, Hugo Mouquet, Sandra Pellegrini, Stanislas Pol, Lars Rogge, Anavaj Sakuntabhai, Olivier Schwartz, Benno Schwikowski, Spencer Shorte, Vassili Soumelis, Frédéric Tangy, Eric Tartour, Antoine Toubert, Marie-Noëlle Ungeheuer, Illanes Gabriel, Universidad de la República (Uruguay). Facultad de Ciencias. Centro de Matemática., Urrutia Alejandra, Rouilly Vincent, Posseme Céline, Djebali Raouf, Libri Valentina, Albaud Benoit, Gentien David, Piasecka Barbara, Hasan Milena, Fontes Magnus, Quintana-Murci Lluis, Albert Matthew L., Genentech, Inc. [San Francisco], Immunobiologie des Cellules dendritiques, Institut Pasteur [Paris]-Institut National de la Santé et de la Recherche Médicale (INSERM), Centre de Recherche Translationnelle - Center for Translational Science (CRT), Institut Pasteur [Paris], Centro de Matemática [Montevideo] (CMAT), Universidad de la República [Montevideo] (UCUR), International Group for Data Analysis (IGDA), Plateforme de génomique [Institut Curie], Institut Curie [Paris], Centre for Mathematical Sciences, Mathematical Statistics, Lund University [Lund], Génétique Evolutive Humaine - Human Evolutionary Genetics, Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), This work benefited from support of the French government’s Invest in theFuture program managed by the Agence Nationale de la Recherche (ANR, reference 10-LABX-69-01), Milieu Intérérieur Consortium (34 collaborateurs) : Abel L, Alcover A, Astrom K, Bousso P, Bruhns P, Cumano A, Demangel C, Deriano L, Di Santo J, Dromer F, Eberl G, Enninga J, Fellay J, Freitas A, Gelpi O, Gomperts-Boneca I, Hercberg S, Lantz O, Leclerc C, Mouquet H, Pellegrini S, Pol S, Rogge L, Sakuntabhai A, Schwartz O, Schwikowski B, Shorte S, Soumelis V, Tangy F, Tartour E, Toubert A, Ungeheuer MN, Quintana-Murci L, Albert ML., ANR-10-LABX-0069,MILIEU INTERIEUR,GENETIC & ENVIRONMENTAL CONTROL OF IMMUNE PHENOTYPE VARIANCE: ESTABLISHING A PATH TOWARDS PERSONALIZED MEDICINE(2010), Vougny, Marie-Christine, Laboratoires d'excellence - GENETIC & ENVIRONMENTAL CONTROL OF IMMUNE PHENOTYPE VARIANCE: ESTABLISHING A PATH TOWARDS PERSONALIZED MEDICINE - - MILIEU INTERIEUR2010 - ANR-10-LABX-0069 - LABX - VALID, Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM), Institut Pasteur [Paris] (IP), Universidad de la República [Montevideo] (UDELAR), and Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
0301 basic medicine ,Adult ,Male ,Cell type ,[SDV.IMM] Life Sciences [q-bio]/Immunology ,Transcription, Genetic ,medicine.medical_treatment ,Stimulation ,Computational biology ,Biology ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Immune system ,Complex induced immune responses ,Gene expression ,medicine ,Humans ,Lymphocytes ,Receptor ,Gene ,lcsh:QH301-705.5 ,Innate immune system ,Bacteria ,Gene Expression Profiling ,Toll-Like Receptors ,Immunity ,030104 developmental biology ,Cytokine ,Blood ,Gene Expression Regulation ,lcsh:Biology (General) ,Immunology ,[SDV.IMM]Life Sciences [q-bio]/Immunology ,Cytokines ,Female ,Whole-blood - Abstract
Figura como autor también el Milieu Intérieur Consortium Systems approaches for the study of immune signaling pathways have been traditionally based on purified cells or cultured lines. However, in vivo responses involve the coordinated action of multiple cell types, which interact to establish an inflammatory microenvironment. We employed standardized whole-blood stimulation systems to test the hypothesis that responses to Toll-like receptor ligands or whole microbes can be defined by the transcriptional signatures of key cytokines. We found 44 genes, identified using Support Vector Machine learning, that captured the diversity of complex innate immune responses with improved segregation between distinct stimuli. Furthermore, we used donor variability to identify shared inter-cellular pathways and trace cytokine loops involved in gene expression. This provides strategies for dimension reduction of large datasets and deconvolution of innate immune responses applicable for characterizing immunomodulatory molecules. Moreover, we provide an interactive R-Shiny application with healthy donor reference values for induced inflammatory genes.
- Published
- 2016
- Full Text
- View/download PDF
41. Preserved Central Memory and Activated Effector Memory CD4+ T-Cell Subsets in Human Immunodeficiency Virus Controllers: an ANRS EP36 Study.
- Author
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Potter, Simon J., Lacabaratz, Christine, Lambotte, Olivier, Perez-Patrigeon, Santiago, Vingert, Benoît, Sinet, Martine, Colle, Jean-Hervé, Urrutia, Alejandra, Scott-Algara, Daniel, Boufassa, Faroudy, Delfraissy, Jean-François, Thèze, Jacques, Venet, Alain, and Chakrabarti, Lisa A.
- Subjects
- *
HIV , *VIRAL replication , *ANTIRETROVIRAL agents , *CD4 antigen , *T cells , *CYTOKINES - Abstract
Human immunodeficiency virus (HIV) controllers are rare individuals who spontaneously control HIV type 1 replication for 10 years or more in the absence of antiretroviral treatment. In the present study, HIV controllers (n = 11) maintained potent HIV-specific CD4 responses in spite of very low antigenic loads. Their CD4+ central memory T (TCM) cells were characterized by near-normal numbers and preserved interleukin-2 (IL-2) secretion in response to HIV antigens and uniformly high expression of the survival receptor IL-7 receptor α (IL-7R α ). Controllers expressed CCR7 at higher levels than uninfected controls, suggesting differences in TCM-cell homing patterns. CD4+ effector memory T (TEM)-cell responses were polyfunctional in HIV controllers, while IL-2 secretion was lost in viremic patients. Cytokine production was three times higher in controllers than in treated patients with undetectable viral loads, suggesting an intrinsically more efficient response in the former group. The total CD4+ TEM-cell pool underwent immune activation in controllers, as indicated by increased HLA-DR expression, decreased IL-7R α expression, a bias towards gamma interferon production upon polyclonal stimulation, and increased macrophage inflammatory protein 1β secretion associated with chronic CCR5 down-regulation. Thus, HIV controllers showed a preserved CD4+ TCM-cell compartment and signs of potent functional activation in the CD4+ TEM-cell compartment. While controllers did not show the generalized immune activation pattern associated with disease progression, they had signs of immune activation restricted to the effector compartment. These findings suggest the induction of an efficient, nondetrimental type of immune activation in patients who spontaneously control HIV. [ABSTRACT FROM AUTHOR]
- Published
- 2007
- Full Text
- View/download PDF
42. Heterogeneity in HIV suppression by CD8 T cells from HIV controllers: association with Gag-specific CD8 T cell responses.
- Author
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Sáez-Cirión A, Sinet M, Shin SY, Urrutia A, Versmisse P, Lacabaratz C, Boufassa F, Avettand-Fènoël V, Rouzioux C, Delfraissy JF, Barré-Sinoussi F, Lambotte O, Venet A, and Pancino G
- Subjects
- Adult, Aged, Cells, Cultured, Female, Gene Products, gag genetics, HIV Infections genetics, HIV-1 genetics, HIV-1 immunology, HIV-1 metabolism, Humans, Interferon-gamma biosynthesis, Interferon-gamma immunology, Male, Middle Aged, Virus Replication, CD8-Positive T-Lymphocytes enzymology, CD8-Positive T-Lymphocytes metabolism, Gene Products, gag immunology, Gene Products, gag metabolism, Genetic Heterogeneity, HIV Infections immunology, HIV Infections metabolism
- Abstract
"HIV controllers" (HICs) are rare individuals in whom HIV-1 plasma viral load remains undetectable without antiretroviral treatment. This spontaneous viral control in HICs is usually associated to strong functional HIV-specific CD8(+) T cell responses. Accordingly, we have recently shown that CD8(+) T cells from HICs strongly suppress ex vivo HIV-1 infection of autologous CD4(+) T cells, suggesting a crucial role of this response in vivo. Knowledge of the mechanisms underlying the CD8(+) T cell antiviral activity might help to develop effective T cell-based vaccines. In the present work, we further characterized the HIV-suppressive capacity of CD8(+) T cells in 19 HICs. CD8(+) T cells from 14 of the 19 HICs showed strong HIV-suppressive capacity ex vivo. This capacity was stable over time and was partially effective even on other primate lentiviruses. HIV-suppressive capacity of CD8(+) T cells correlated strongly with the frequency of HIV-specific CD8(+) T cells, and in particular of Gag-specific CD8(+) T cells. We also identified five HICs who had weak HIV-suppressive CD8(+) T cell capacities and HIV-specific CD8(+) T cell responses. Among these five HICs, at least three had highly in vitro replicative viruses, suggesting that the control of viremia in these patients is not due to replication-defective viruses. These results, on the one hand, suggest the importance of Gag responses in the antiviral potency of CD8(+) T cells from HICs and, on the other hand, propose that other host mechanisms may contribute to restraining HIV infection in HICs.
- Published
- 2009
- Full Text
- View/download PDF
43. Preserved central memory and activated effector memory CD4+ T-cell subsets in human immunodeficiency virus controllers: an ANRS EP36 study.
- Author
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Potter SJ, Lacabaratz C, Lambotte O, Perez-Patrigeon S, Vingert B, Sinet M, Colle JH, Urrutia A, Scott-Algara D, Boufassa F, Delfraissy JF, Thèze J, Venet A, and Chakrabarti LA
- Subjects
- Adult, Aged, CD4 Lymphocyte Count, CD4-Positive T-Lymphocytes classification, Cytokines metabolism, Female, HIV Infections virology, HIV-1 immunology, Humans, Male, Middle Aged, CD4-Positive T-Lymphocytes immunology, HIV Infections immunology, HIV Long-Term Survivors, Immunologic Memory immunology, Lymphocyte Activation immunology
- Abstract
Human immunodeficiency virus (HIV) controllers are rare individuals who spontaneously control HIV type 1 replication for 10 years or more in the absence of antiretroviral treatment. In the present study, HIV controllers (n = 11) maintained potent HIV-specific CD4 responses in spite of very low antigenic loads. Their CD4+ central memory T (T(CM)) cells were characterized by near-normal numbers and preserved interleukin-2 (IL-2) secretion in response to HIV antigens and uniformly high expression of the survival receptor IL-7 receptor alpha (IL-7Ralpha). Controllers expressed CCR7 at higher levels than uninfected controls, suggesting differences in T(CM)-cell homing patterns. CD4+ effector memory T (T(EM))-cell responses were polyfunctional in HIV controllers, while IL-2 secretion was lost in viremic patients. Cytokine production was three times higher in controllers than in treated patients with undetectable viral loads, suggesting an intrinsically more efficient response in the former group. The total CD4+ T(EM)-cell pool underwent immune activation in controllers, as indicated by increased HLA-DR expression, decreased IL-7Ralpha expression, a bias towards gamma interferon production upon polyclonal stimulation, and increased macrophage inflammatory protein 1beta secretion associated with chronic CCR5 down-regulation. Thus, HIV controllers showed a preserved CD4+ T(CM)-cell compartment and signs of potent functional activation in the CD4+ T(EM)-cell compartment. While controllers did not show the generalized immune activation pattern associated with disease progression, they had signs of immune activation restricted to the effector compartment. These findings suggest the induction of an efficient, nondetrimental type of immune activation in patients who spontaneously control HIV.
- Published
- 2007
- Full Text
- View/download PDF
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