482 results on '"University of Guam"'
Search Results
2. Children's Healthy Living Community Randomized Trial (CHL)
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University of Guam, Northern Marianas College, University of Alaska Fairbanks, and American Samoa Community College
- Published
- 2023
3. Distribution of the Red Coconut Scale, Furcaspis oceanica Lindinger (Homoptera:Diaspididae) and its Introduced Parasitoid, Adelencyrtus oceanicus Doutt (Hymenoptera:Encyrtidae) in Guam
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Lali, T. S.; College of Agriculture and Life Sciences, University of Guam, Mangilao, Guam 96923, Muniappan, R.; College of Agriculture and Life Sciences, University of Guam, Mangilao, Guam 96923, Lali, T. S.; College of Agriculture and Life Sciences, University of Guam, Mangilao, Guam 96923, and Muniappan, R.; College of Agriculture and Life Sciences, University of Guam, Mangilao, Guam 96923
- Abstract
A survey conducted from January to March 1996 to determine the distribution of the red coconut scale, Furcaspis oceanica Lindinger (Homoptera : Diaspididae) and its natural enemy, Adelencyrtus oceanicus Doutt (Hymenoptera: Encyrtidae) introduced to Guam in 1988-89, showed that both have spread to all the villages of Guam except the southern most village of Umatac. There were more male scales than females in the samples collected. Males were not parasitized by A. oceanicus. A high rate of parasitization by A. oceanicus was noted in the villages of Talofofo, Harmon and Merizo.
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- 2014
4. Introduction and Establishment of Pareuchaetes pseudoinsulata Rego Barros (Arctiidae) against Chromolaena odorata in the Western Caroline Islands
- Author
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Muniappan, R.; Agricultural Experiment Station, College of Agriculture and Life Sciences, University of Guam, UOG Station, Mangilao, Guam 96923, Marutani, M.; Agricultural Experiment Station, College of Agriculture and Life Sciences, University of Guam, UOG Station, Mangilao, Guam 96923, Denton, G. R. W.; Agricultural Experiment Station, College of Agriculture and Life Sciences, University of Guam, UOG Station, Mangilao, Guam 96923, Muniappan, R.; Agricultural Experiment Station, College of Agriculture and Life Sciences, University of Guam, UOG Station, Mangilao, Guam 96923, Marutani, M.; Agricultural Experiment Station, College of Agriculture and Life Sciences, University of Guam, UOG Station, Mangilao, Guam 96923, and Denton, G. R. W.; Agricultural Experiment Station, College of Agriculture and Life Sciences, University of Guam, UOG Station, Mangilao, Guam 96923
- Abstract
Chromolaena odorata (L.) R.M. King and H. Robinson is a herbaceous perennial belonging to the family Asteraceae (Compositae). It occurs naturally over a wide area of the tropical and subtropical Americas. from Southern Florida to the northern border of Argentina, and has become a serious problem in the humid tropical regions of Africa, Asia, and the Mariana Islands (Muniappan et al.,1988).
- Published
- 2014
5. Biological Control of the Orange Spiny Whitefly, Aleurocanthus spiniferus [Homoptera:Aleyrodidae] on Chuuk and Yap in Micronesia
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Marutani, Mari; Agricultural Experiment Station, University of Guam, UOG Station, Mangilao, GU 96923, Muniappan, R.; Agricultural Experiment Station, University of Guam, UOG Station, Mangilao, GU 96923, Marutani, Mari; Agricultural Experiment Station, University of Guam, UOG Station, Mangilao, GU 96923, and Muniappan, R.; Agricultural Experiment Station, University of Guam, UOG Station, Mangilao, GU 96923
- Abstract
The orange spiny whitefly, Aleurocanthus spiniferus (Quaintance) (Homoptera:Aleyrodidae) was first reported on Yap in 1986 and on the island of Moen in Chuuk State of Federated States of Micronesia in 1948. A parasitoid, Encarsia smithi (Silvestri) (Hymenoptera:Aphelinidae), was introduced to Moen, on Nov. 1, 1989 and to Yap on Sept.26, Oct. 3 and Oct. 10, 1990 from Guam. In Moen, the establishment of the parasitoid was confirmed on Sept.5,1990 with a large reduction in population of the orange spiny whitefly. Similarly, in Yap, establishment of E. smithi was confirmed at the two release sites on March 13, 1991 and in most of the island on Septemher 20,1991 in Yap.
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- 2014
6. Banner from University of Guam
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University of Guam and University of Guam
- Published
- 2012
7. Association of color and feeding deterrence by tropical reef fishes
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Universidad de Alicante. Departamento de Ciencias del Mar y Biología Aplicada, University of Guam. Marine Laboratory, Gimenez-Casalduero, Francisca, Thacker, Robert W., Paul, Valerie J., Universidad de Alicante. Departamento de Ciencias del Mar y Biología Aplicada, University of Guam. Marine Laboratory, Gimenez-Casalduero, Francisca, Thacker, Robert W., and Paul, Valerie J.
- Abstract
While many marine molluscs have been suggested to use aposematic coloration to avoid predation, few studies have tested the ability of marine predators to learn to associate colors with distasteful prey. In field experiments, we tested the ability of two populations of reef fishes to discriminate among red, yellow, and black artificial nudibranch models when one color was paired with a feeding deterrent. We offered fishes (1) the models without any feeding deterrents, (2) the models with a feeding deterrent coated onto one color, and (3) the models without deterrents again. If reef fishes learn to associate colors with noxious prey, we expected the color paired with the feeding deterrent to be eaten less frequently in the final assay than the initial assay. In both populations, fishes formed clear associations between color and feeding deterrence. However, when the experiment was repeated in one population, changing the color paired with the feeding deterrent, fishes did not form an association between color and feeding deterrence. In this case, prior learning may have affected subsequent trials. Our study indicates that common colors of nudibranchs are recognizable by fishes and can be associated with noxious prey.
- Published
- 1999
8. Haplopteris ensiformis
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Ecology Class (University of Guam), Ecology Class (University of Guam), Ecology Class (University of Guam), and Ecology Class (University of Guam)
- Abstract
Pteridophytes, http://name.umdl.umich.edu/IC-HERB00IC-X-1189065%5DMICH-V-1189065, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1189065/MICH-V-1189065/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1982
9. Haplopteris ensiformis
- Author
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Ecology Class (University of Guam), Ecology Class (University of Guam), Ecology Class (University of Guam), and Ecology Class (University of Guam)
- Abstract
Pteridophytes, http://name.umdl.umich.edu/IC-HERB00IC-X-1189063%5DMICH-V-1189063, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1189063/MICH-V-1189063/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1980
10. Social–environmental drivers inform strategic management of coral reefs in the Anthropocene
- Author
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Lionel Bigot, Zoe T. Richards, Gareth J. Williams, Mohsen Kayal, Thamasak Yeemin, Steven Johnson, Simon D. Donner, Martin Krkošek, John F. Bruno, Joleah B. Lamb, Claire Goiran, Fraser A. Januchowski-Hartley, T. Edward Roberts, Maria Beger, Emily S. Darling, Andrew S. Hoey, Nyawira A. Muthiga, Stacy D. Jupiter, Peter D. Steinberg, David Mouillot, Gabby N. Ahmadia, Nur Fadli, James P. Gilmour, George Shedrawi, Michael L. Berumen, James R. Guest, Che Din Mohd Safuan, Shaun K. Wilson, Eva Maire, Patrick F. Smallhorn-West, Nicholas A. J. Graham, Tom C. L. Bridge, Joachim Claudet, Tsai Min Sin, Vianney Denis, Enric Sala, Ku’ulei S. Rodgers, Estradivari, Sara E. Cannon, Erik C. Franklin, Jeffrey Low, Kirsty L. Nash, Peter Houk, Tim R. McClanahan, Makamas Sutthacheep, Chun Hong James Tan, Lauriane Ribas-Deulofeu, Eric K. Brown, Jennifer E. Smith, Bruce Cauvin, David A. Feary, Joshua E. Cinner, Georgina G. Gurney, Ambroise Brenier, Chaolun Allen Chen, Joseph Maina, Helen E. Fox, Jessica Bouwmeester, Christina C. Hicks, Michelle A. C. Lee, Brigitte Sommer, Rohan Arthur, Shinta Pardede, Osamu Nedlic, Jean-Paul A. Hobbs, Lucie Penin, Douglas Fenner, Alan M. Friedlander, John M. Pandolfi, Marji Puotinen, Efin Muttaqin, Marie-Josée Fortin, Mehdi Adjeroud, Camilo Mora, Yashika Nand, Andrew G. Bauman, Chao-Yang Kuo, Stuart Campbell, Vardhan Patankar, William J. Skirving, Laboratoire d'Excellence CORAIL (LabEX CORAIL), Université des Antilles (UA)-Institut d'écologie et environnement-Université de la Nouvelle-Calédonie (UNC)-Université de la Polynésie Française (UPF)-Université de La Réunion (UR)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-École des hautes études en sciences sociales (EHESS)-Université des Antilles et de la Guyane (UAG)-Institut de Recherche pour le Développement (IRD), Observatoire océanologique de Banyuls (OOB), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Queen's University [Kingston, Canada], MARine Biodiversity Exploitation and Conservation (UMR MARBEC), Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Institut de Recherche pour le Développement (IRD), James Cook University (JCU), Australian Institute of Marine Science (AIMS), Laboratoire de biologie marine et malacologie, Université de Perpignan Via Domitia (UPVD)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS), World Wildlife Fund, Red Sea Research Centre (RSRC), King Abdullah University of Science and Technology (KAUST), Department of Chemistry, Princeton University, Harris Birthright Research Centre for Fetal Medicine, King's College Hospital Medical School, Réserve Naturelle Marine de la Réunion (GIP-RNMR), Réserves Naturelles de France, Centre de recherches insulaires et observatoire de l'environnement (CRIOBE), Laboratoire d'Ecologie Marine (ECOMAR), Université de La Réunion (UR)-Centre National de la Recherche Scientifique (CNRS), Arizona State University [Tempe] (ASU), Université de la Nouvelle-Calédonie (UNC), Institut de sciences exactes et appliquées (ISEA), Marine Laboratory, University of Guam, Bureau of Environmental and Coastal Quality, Commonwealth of the Northern Mariana Islands (CNMI), Bren School of Environmental Science & Management, Department of Ecology and Evolutionary Biology, Cornell University [New York], Dublin Institute of Technology (DIT), Wildlife Conservation Society, The Wildlife Conservation Society, Centre d'Estudis Avançats de Blanes, Johnson Matthey plc, Johnson Matthey Plc, Department of Ecology & Evolutionary Biology, University of Toronto, Ecosystèmes lagunaires : organisation biologique et fonctionnement (ECOLAG), and Université Montpellier 2 - Sciences et Techniques (UM2)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Centre National de la Recherche Scientifique (CNRS)
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0106 biological sciences ,geography ,geography.geographical_feature_category ,Ecology ,biology ,Coral bleaching ,business.industry ,010604 marine biology & hydrobiology ,Coral ,Environmental resource management ,[SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology ,Climate change ,Coral reef ,15. Life on land ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,13. Climate action ,Anthozoa ,Foundation species ,Marine protected area ,14. Life underwater ,business ,Reef ,Ecology, Evolution, Behavior and Systematics - Abstract
Este artículo contiene 10 páginas, 5 figuras., Without drastic efforts to reduce carbon emissions and mitigate globalized stressors, tropical coral reefs are in jeopardy. Strategic conservation and management requires identification of the environmental and socioeconomic factors driving the persistence of scleractinian coral assemblages—the foundation species of coral reef ecosystems. Here, we compiled coral abundance data from 2,584 Indo-Pacific reefs to evaluate the influence of 21 climate, social and environmental drivers on the ecology of reef coral assemblages. Higher abundances of framework-building corals were typically associated with: weaker thermal disturbances and longer intervals for potential recovery; slower human population growth; reduced access by human settlements and markets; and less nearby agriculture. We therefore propose a framework of three management strategies (protect, recover or transform) by considering: (1) if reefs were above or below a proposed threshold of >10% cover of the coral taxa important for structural complexity and carbonate production; and (2) reef exposure to severe thermal stress during the 2014–2017 global coral bleaching event. Our findings can guide urgent management efforts for coral reefs, by identifying key threats across multiple scales and strategic policy priorities that might sustain a network of functioning reefs in the Indo-Pacific to avoid ecosystem collapse.
- Published
- 2019
- Full Text
- View/download PDF
11. Trait structure and redundancy determine sensitivity to disturbance in marine fish communities
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Sébastien Villéger, David Mouillot, Cyrille Violle, Shaun K. Wilson, Wilfried Thuiller, Matthew McLean, Peter Houk, Arnaud Auber, Nicholas A. J. Graham, Département Ecologie, Physiologie et Ethologie (DEPE-IPHC), Institut Pluridisciplinaire Hubert Curien (IPHC), Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS), Queen's University [Kingston], Marine Laboratory, University of Guam, Université de Montpellier (UM), Centre d’Ecologie Fonctionnelle et Evolutive (CEFE), Université Paul-Valéry - Montpellier 3 (UM3)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-École pratique des hautes études (EPHE)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Laboratoire d'Ecologie Alpine (LECA), Centre National de la Recherche Scientifique (CNRS)-Université Savoie Mont Blanc (USMB [Université de Savoie] [Université de Chambéry])-Université Joseph Fourier - Grenoble 1 (UJF)-Université Grenoble Alpes (UGA), MARine Biodiversity Exploitation and Conservation (UMR MARBEC), Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS), Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS), Queen's University [Kingston, Canada], Université Paul-Valéry - Montpellier 3 (UPVM)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Laboratoire d'Ecologie Alpine (LECA ), Université Savoie Mont Blanc (USMB [Université de Savoie] [Université de Chambéry])-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019]), and Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Institut de Recherche pour le Développement (IRD)
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0106 biological sciences ,010504 meteorology & atmospheric sciences ,Environmental change ,[SDE.MCG]Environmental Sciences/Global Changes ,Biodiversity ,Biology ,Ecological systems theory ,010603 evolutionary biology ,01 natural sciences ,diversity stability ,Environmental Chemistry ,Dominance (ecology) ,Animals ,Ecosystem ,14. Life underwater ,ComputingMilieux_MISCELLANEOUS ,0105 earth and related environmental sciences ,General Environmental Science ,Global and Planetary Change ,English Channel ,Ecology ,Fishes ,15. Life on land ,ecological traits ,functional diversity ,Taxon ,climate change ,ecosystem functioning ,[SDE]Environmental Sciences ,Trait ,Species richness ,coral reefs ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology - Abstract
Trait diversity is believed to influence ecosystem dynamics through links between organismal traits and ecosystem processes. Theory predicts that key traits and high trait redundancy-large species richness and abundance supporting the same traits-can buffer communities against environmental disturbances. While experiments and data from simple ecological systems lend support, large-scale evidence from diverse, natural systems under major disturbance is lacking. Here, using long-term data from both temperate (English Channel) and tropical (Seychelles Islands) fishes, we show that sensitivity to disturbance depends on communities' initial trait structure and initial trait redundancy. In both ecosystems, we found that increasing dominance by climatically vulnerable traits (e.g., small, fast-growing pelagics/corallivores) rendered fish communities more sensitive to environmental change, while communities with higher trait redundancy were more resistant. To our knowledge, this is the first study demonstrating the influence of trait structure and redundancy on community sensitivity over large temporal and spatial scales in natural systems. Our results exemplify a consistent link between biological structure and community sensitivity that may be transferable across ecosystems and taxa and could help anticipate future disturbance impacts on biodiversity and ecosystem functioning.
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- 2019
- Full Text
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12. Patterns and drivers of species diversity in the Indo‐Pacific red seaweed Portieria
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Showe-Mei Lin, Line Le Gall, John J. Bolton, Tracey M. Spokes, Olivier De Clerck, Claude Payri, Sofie D'hondt, Christophe Vieira, Eric Coppejans, Mitsunobu Kamiya, Robert J. Anderson, John M. Huisman, Mayalen Zubia, Lydiane Mattio, Dioli Ann Payo, Tom Schils, Heroen Verbruggen, Stefano G. A. Draisma, Alison R. Sherwood, Carlos Frederico D. Gurgel, Frederik Leliaert, Gary W. Saunders, Phycology Research Group and Center for Molecular Phylogenetics and Evolution, Universiteit Gent = Ghent University [Belgium] (UGENT), University of Guam, Centre for Educational Research and Development, University of Lincoln, Fukui Prefectural University, University of Fukui, Centre for Automotive Safety Research, University of Adelaide, Department of Biological Sciences (DBS), Ecosystèmes Insulaires Océaniens (UMR 241) (EIO), Université de la Polynésie Française (UPF)-Institut Louis Malardé [Papeete] (ILM), Institut de Recherche pour le Développement (IRD)-Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER), Ecologie marine tropicale des océans Pacifique et Indien (ENTROPIE [Nouvelle-Calédonie]), Institut de Recherche pour le Développement (IRD [Nouvelle-Calédonie])-Ifremer - Nouvelle-Calédonie, and Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de la Nouvelle-Calédonie (UNC)
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0106 biological sciences ,0301 basic medicine ,Species complex ,Algae ,Range (biology) ,Evolution ,Speciation ,Population ,Biodiversity ,Portieria ,Biology ,010603 evolutionary biology ,01 natural sciences ,Historical biogeography ,03 medical and health sciences ,Marine biogeography ,Coral-reef fishes ,Global patterns ,Diversification evidence ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,14. Life underwater ,education ,Indian Ocean ,Ecology, Evolution, Behavior and Systematics ,education.field_of_study ,Pacific Ocean ,Ecology ,Biodiversity hotspot ,Relative importance ,Species diversity ,Dispersal ,15. Life on land ,biology.organism_classification ,030104 developmental biology ,Cryptic species ,Rhodophyta ,Biological dispersal ,Species richness ,Coral Triangle ,Tropical Pacific - Abstract
International audience; Aim Biogeographical processes underlying Indo-Pacific biodiversity patterns have been relatively well studied in marine shallow water invertebrates and fishes, but have been explored much less extensively in seaweeds, despite these organisms often displaying markedly different patterns. Using the marine red alga Portieria as a model, we aim to gain understanding of the evolutionary processes generating seaweed biogeographical patterns. Our results will be evaluated and compared with known patterns and processes in animals. Location Indo-Pacific marine region.Methods Species diversity estimates were inferred using DNA-based species delimitation methods. Historical biogeographical patterns were inferred based on a six-gene time-calibrated phylogeny, distribution data of 802 specimens, and probabilistic modelling of geographical range evolution. The importance of geographical isolation for speciation was further evaluated by population genetic analyses at the intraspecific level. Results We delimited 92 candidate species, most with restricted distributions, suggesting low dispersal capacity. Highest species diversity was found in the Indo-Malay Archipelago (IMA). Our phylogeny indicates that Portieria originated during the late Cretaceous in the area that is now the Central Indo-Pacific. The biogeographical history of Portieria includes repeated dispersal events to peripheral regions, followed by long-term persistence and diversification of lineages within those regions, and limited dispersal back to the IMA. Main conclusions Our results suggest that the long geological history of the IMA played an important role in shaping Portieria diversity. High species richness in the IMA resulted from a combination of speciation at small spatial scales, possibly as a result of increased regional habitat diversity from the Eocene onwards, and species accumulation via dispersal and/or island integration through tectonic movement. Our results are consistent with the biodiversity feedback model, in which biodiversity hotspots act as both "centres of origin" and "centres of accumulation," and corroborate previous findings for invertebrates and fish that there is no single unifying model explaining the biological diversity within the IMA.
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- 2018
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13. Bounding Surface Modeling of Compacted Silty Sand Exhibiting Suction Dependent Post-peak Strain Softening
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Patil, Ujwalkumar, Hoyos, Laureano, Morvan, Mathilde, Puppala, Anand, Morvan, Mathilde, Department of Civil Engineering, School of Engineering, University of Guam, Mangilao, Department of Civil Engineering, University of Texas at Arlington, Arlington, 76019 Texas, Institut Pascal (IP), and SIGMA Clermont (SIGMA Clermont)-Université Clermont Auvergne [2017-2020] (UCA [2017-2020])-Centre National de la Recherche Scientifique (CNRS)
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elastoplasticity ,soil modeling ,dilatancy ,[SPI.GCIV.GEOTECH]Engineering Sciences [physics]/Civil Engineering/Géotechnique ,[SPI.GCIV.GEOTECH] Engineering Sciences [physics]/Civil Engineering/Géotechnique ,suction‐controlled triaxial testing ,matric suction ,strain softening - Abstract
International audience; This article focuses on modeling the strain hardening-softening response of statically compacted silty sand as observed from a comprehensive series of suction-controlled, consolidated-drained triaxial tests accomplished in a fully-automated, double-walled triaxial test system via the axis-translation technique. The constitutive model used in this work is based on the theory of Bounding Surface (BS) plasticity, and is formulated within a critical state framework. The essential BS model parameters are calibrated using the full set of triaxial test results and then used for predictions of compacted silty sand response at matric suction states varying from 50 to 750 kPa. Complementary simulations using the Barcelona Basic Model (BBM) have also been included, alongside BS model predictions, in order to get further enlightening insights into some of the main limitations and challenges facing both frameworks within the context of the experimental evidence resulting from the present research effort. In general, irrespective of the value of matric suction applied, the BBM performs relatively well in predicting response at peak and critical state failure under low net confining pressure while the BSM performs relatively well under high net confining pressures.
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- 2018
14. Geographical partitioning of marine macrophyte assemblages in the tropical Pacific: a result of local and regional diversity processes
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Peter S. Vroom, Tom Schils, Aline Tribollet, University of Guam, and Hawai'i Institute of Marine Biology (HIMB)
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0106 biological sciences ,Marine ecoregions ,geography ,geography.geographical_feature_category ,Ecology ,010604 marine biology & hydrobiology ,Biogeography ,Biodiversity ,[PHYS.PHYS.PHYS-GEO-PH]Physics [physics]/Physics [physics]/Geophysics [physics.geo-ph] ,Coral reef ,15. Life on land ,Biology ,010603 evolutionary biology ,01 natural sciences ,Macrophyte ,Taxon ,14. Life underwater ,Species richness ,Reef ,ComputingMilieux_MISCELLANEOUS ,Ecology, Evolution, Behavior and Systematics - Abstract
Aim Various coral reef organisms display distinct gradients in taxonomic turnover throughout the tropical Pacific Ocean. Marine macrophytes are one of the most dominant and ecologically important benthic components of tropical reefs, yet little is known about the ecological biogeography of the macrophyte assemblages throughout this biodiverse region. This study assessed: (1) the geographical clustering of macrophyte assemblages in the tropical Pacific; (2) the environmental/geographical factors that best explain the observed patterns in taxon richness and taxon composition; and (3) the validity of large-scale biogeographical hypotheses with respect to the distribution of macrophyte assemblages. Location Coral reefs of 39 US Pacific islands. Methods Surveys of reef macrophytes for all 39 Pacific islands were conducted from 2004 to 2007. Rank-order data of quadrats were transformed to proportional abundance data in order to compute site averages for each of the 84 macrophyte categories. Further data analysis employed taxon accumulation curves, generalized additive models, and multivariate techniques. Results Pacific macrophyte assemblages displayed consistently higher within-archipelago similarities than between-archipelago similarities, which is reflected in pronounced differences in functional group composition between archipelagos. The maximum land elevation, maximum seasonal sea surface temperature, reef extent, and longitude of the investigated islands were the predictor variables that best described the similarities in macrophyte assemblage structure among islands. Maximum land elevation and reef extent, however, were the two predictor variables that best explained macrophyte richness per island. Main conclusions Macrophyte assemblages of the Pacific Islands cluster in geographical groups, indicative of the importance of evolutionary factors related to dispersal and speciation. Whereas macrophyte assemblage structure is governed by both local (habitat diversity and availability) and regional (geographical and environmental descriptors related to oceanic isolation and latitude) variables, the macrophyte richness of these islands is defined primarily by local habitat diversity and availability. Biogeographical patterns of marine macrophyte assemblages in the tropical Pacific deviate from those of other well-studied marine organisms.
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- 2013
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15. Local-scale projections of coral reef futures and implications of the Paris Agreement
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Gabby N. Ahmadia, Scott F. Heron, Ruben van Hooidonk, Laurie J. Raymundo, Gareth J. Williams, Jeffrey Maynard, Serge Planes, Jerker Tamelander, Jamison M. Gove, NOAA Atlantic Oceanographic and Meteorological Laboratory (AOML), National Oceanic and Atmospheric Administration (NOAA), Centre de recherches insulaires et observatoire de l'environnement (CRIOBE), Université de Perpignan Via Domitia (UPVD)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS), United Nations Environment Programme, Ecosystems and Oceanography Program, Pacific Islands Fisheries Science Center, World Wildlife Fund, Marine Laboratory, University of Guam, School of Ocean Sciences, Bangor University, Marine Geophysical Laboratory, James Cook University (JCU), Laboratoire d'Excellence CORAIL (LabEX CORAIL), Université des Antilles (UA)-Institut d'écologie et environnement-Université de la Nouvelle-Calédonie (UNC)-Université de la Polynésie Française (UPF)-Université de La Réunion (UR)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-École des hautes études en sciences sociales (EHESS)-Université des Antilles et de la Guyane (UAG)-Institut de Recherche pour le Développement (IRD), Université de Perpignan Via Domitia (UPVD)-École Pratique des Hautes Études (EPHE), Institut de Recherche pour le Développement (IRD)-Université des Antilles et de la Guyane (UAG)-École des hautes études en sciences sociales (EHESS)-École Pratique des Hautes Études (EPHE), and Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de La Réunion (UR)-Université de la Polynésie Française (UPF)-Université de la Nouvelle-Calédonie (UNC)-Institut d'écologie et environnement-Université des Antilles (UA)
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0106 biological sciences ,Conservation of Natural Resources ,010504 meteorology & atmospheric sciences ,Coral bleaching ,Oceans and Seas ,[SDE.MCG]Environmental Sciences/Global Changes ,Climate change ,Public Policy ,coral reefs conservation ,C0P21 ,010603 evolutionary biology ,01 natural sciences ,Article ,Anthozoa ,Animals ,Ecosystem ,14. Life underwater ,Reef ,0105 earth and related environmental sciences ,Air Pollutants ,Multidisciplinary ,geography.geographical_feature_category ,biology ,Coral Reefs ,Ecology ,Temperature ,Coral reef ,biology.organism_classification ,Fishery ,Geography ,13. Climate action ,Paris agreement ,Spatial variability ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,Futures contract ,Software ,Forecasting - Abstract
Increasingly frequent severe coral bleaching is among the greatest threats to coral reefs posed by climate change. Global climate models (GCMs) project great spatial variation in the timing of annual severe bleaching (ASB) conditions; a point at which reefs are certain to change and recovery will be limited. However, previous model-resolution projections (~1 × 1°) are too coarse to inform conservation planning. To meet the need for higher-resolution projections, we generated statistically downscaled projections (4-km resolution) for all coral reefs; these projections reveal high local-scale variation in ASB. Timing of ASB varies >10 years in 71 of the 87 countries and territories with >500 km2 of reef area. Emissions scenario RCP4.5 represents lower emissions mid-century than will eventuate if pledges made following the 2015 Paris Climate Change Conference (COP21) become reality. These pledges do little to provide reefs with more time to adapt and acclimate prior to severe bleaching conditions occurring annually. RCP4.5 adds 11 years to the global average ASB timing when compared to RCP8.5; however, >75% of reefs still experience ASB before 2070 under RCP4.5. Coral reef futures clearly vary greatly among and within countries, indicating the projections warrant consideration in most reef areas during conservation and management planning.
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- 2016
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16. Systematic Study of Azimuthal Anisotropy in Cu$+$Cu and Au$+$Au Collisions at $\sqrt{s_{_{NN}}} = 62.4$ and 200~GeV
- Author
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Adare, A., Afanasiev, S., Aidala, C., Ajitanand, N. N., Akiba, Y., Al-Bataineh, H., Al-Jamel, A., Alexander, J., Aoki, K., Aphecetche, L., Armendariz, R., Aronson, S. H., Asai, J., Atomssa, E. T., Averbeck, R., Awes, T. C., Azmoun, B., Babintsev, V., Baksay, G., Baksay, L., Baldisseri, A., Barish, K. N., Barnes, P. D., Bassalleck, B., Bathe, S., Batsouli, S., Baublis, V., Bauer, F., Bazilevsky, A., Belikov, S., Bennett, R., Berdnikov, Y., Bickley, A. A., Bjorndal, M. T., Boissevain, J. G., Borel, H., Boyle, K., Brooks, M. L., Brown, D. S., Bucher, D., Buesching, H., Bumazhnov, V., Bunce, G., Burward-Hoy, J. M., Butsyk, S., Campbell, S., Chai, J. -S., Chang, B. S., Charvet, J. -L., Chernichenko, S., Chi, C. Y., Chiba, J., Chiu, M., Choi, I. J., Chujo, T., Chung, P., Churyn, A., Cianciolo, V., Cleven, C. R., Cobigo, Y., Cole, B. A., Comets, M. P., Constantin, P., Csan��d, M., Cs��rg��, T., Dahms, T., Das, K., David, G., Deaton, M. B., Dehmelt, K., Delagrange, H., Denisov, A., d'Enterria, D., Deshpande, A., Desmond, E. J., Dietzsch, O., Dion, A., Donadelli, M., Drachenberg, J. L., Drapier, O., Drees, A., Dubey, A. K., Durum, A., Dzhordzhadze, V., Efremenko, Y. V., Egdemir, J., Ellinghaus, F., Emam, W. S., Enokizono, A., En'yo, H., Espagnon, B., Esumi, S., Eyser, K. O., Fields, D. E., Finger, M., Fleuret, F., Fokin, S. L., Forestier, B., Fraenkel, Z., Frantz, J. E., Franz, A., Frawley, A. D., Fujiwara, K., Fukao, Y., Fung, S. -Y., Fusayasu, T., Gadrat, S., Garishvili, I., Gastineau, F., Germain, M., Glenn, A., Gong, H., Gonin, M., Gosset, J., Goto, Y., de Cassagnac, R. Granier, Grau, N., Greene, S. V., Perdekamp, M. Grosse, Gunji, T., Gustafsson, H. -��., Hachiya, T., Henni, A. Hadj, Haegemann, C., Haggerty, J. S., Hagiwara, M. N., Hamagaki, H., Han, R., Harada, H., Hartouni, E. P., Haruna, K., Harvey, M., Haslum, E., Hasuko, K., Hayano, R., He, X., Heffner, M., Hemmick, T. K., Hester, T., Heuser, J. M., Hiejima, H., Hill, J. C., Hobbs, R., Hohlmann, M., Holmes, M., Holzmann, W., Homma, K., Hong, B., Horaguchi, T., Hornback, D., Huang, S., Hur, M. G., Ichihara, T., Iinuma, H., Imai, K., Inaba, M., Inoue, Y., Isenhower, D., Isenhower, L., Ishihara, M., Isobe, T., Issah, M., Isupov, A., Jacak, B. V., Jia, J., Jin, J., Jinnouchi, O., Johnson, B. M., Joo, K. S., Jouan, D., Kajihara, F., Kametani, S., Kamihara, N., Kamin, J., Kaneta, M., Kang, J. H., Kanou, H., Kawagishi, T., Kawall, D., Kazantsev, A. V., Kelly, S., Khanzadeev, A., Kikuchi, J., Kim, D. H., Kim, D. J., Kim, E., Kim, Y. -S., Kinney, E., Kiss, ��., Kistenev, E., Kiyomichi, A., Klay, J., Klein-Boesing, C., Kochenda, L., Kochetkov, V., Komkov, B., Konno, M., Kotchetkov, D., Kozlov, A., Kr��l, A., Kravitz, A., Kroon, P. J., Kubart, J., Kunde, G. J., Kurihara, N., Kurita, K., Kweon, M. J., Kwon, Y., Kyle, G. S., Lacey, R., Lai, Y. S., Lajoie, J. G., Lebedev, A., Bornec, Y. Le, Leckey, S., Lee, D. M., Lee, M. K., Lee, T., Leitch, M. J., Leite, M. A. L., Lenzi, B., Li, X., Li, X. H., Lim, H., Li��ka, T., Litvinenko, A., Liu, M. X., Love, B., Lynch, D., Maguire, C. F., Makdisi, Y. I., Malakhov, A., Malik, M. D., Manko, V. I., Mao, Y., Ma��ek, L., Masui, H., Matathias, F., McCain, M. C., McCumber, M., McGaughey, P. L., Miake, Y., Mike��, P., Miki, K., Miller, T. E., Milov, A., Mioduszewski, S., Mishra, G. C., Mishra, M., Mitchell, J. T., Mitrovski, M., Morreale, A., Morrison, D. P., Moss, J. M., Moukhanova, T. V., Mukhopadhyay, D., Murata, J., Nagamiya, S., Nagata, Y., Nagle, J. L., Naglis, M., Nakagawa, I., Nakamiya, Y., Nakamura, T., Nakano, K., Newby, J., Nguyen, M., Norman, B. E., Nouicer, R., Nyanin, A. S., Nystrand, J., O'Brien, E., Oda, S. X., Ogilvie, C. A., Ohnishi, H., Ojha, I. D., Oka, M., Okada, K., Omiwade, O. O., Oskarsson, A., Otterlund, I., Ouchida, M., Ozawa, K., Pak, R., Pal, D., Palounek, A. P. T., Pantuev, V., Papavassiliou, V., Park, J., Park, W. J., Pate, S. F., Pei, H., Peng, J. -C., Pereira, H., Peresedov, V., Peressounko, D. Yu., Pinkenburg, C., Pisani, R. P., Purschke, M. L., Purwar, A. K., Qu, H., Rak, J., Rakotozafindrabe, A., Ravinovich, I., Read, K. F., Rembeczki, S., Reuter, M., Reygers, K., Riabov, V., Riabov, Y., Roche, G., Romana, A., Rosati, M., Rosendahl, S. S. E., Rosnet, P., Rukoyatkin, P., Rykov, V. L., Ryu, S. S., Sahlmueller, B., Saito, N., Sakaguchi, T., Sakai, S., Sakata, H., Samsonov, V., Sato, H. D., Sato, S., Sawada, S., Seele, J., Seidl, R., Semenov, V., Seto, R., Sharma, D., Shea, T. K., Shein, I., Shevel, A., Shibata, T. -A., Shigaki, K., Shimomura, M., Shohjoh, T., Shoji, K., Sickles, A., Silva, C. L., Silvermyr, D., Silvestre, C., Sim, K. S., Singh, C. P., Singh, V., Skutnik, S., Slune��ka, M., Smith, W. C., Soldatov, A., Soltz, R. A., Sondheim, W. E., Sorensen, S. P., Sourikova, I. V., Staley, F., Stankus, P. W., Stenlund, E., Stepanov, M., Ster, A., Stoll, S. P., Sugitate, T., Suire, C., Sullivan, J. P., Sziklai, J., Tabaru, T., Takagi, S., Takagui, E. M., Taketani, A., Tanaka, K. H., Tanaka, Y., Tanida, K., Tannenbaum, M. J., Taranenko, A., Tarj��n, P., Thomas, T. L., Todoroki, T., Togawa, M., Toia, A., Tojo, J., Tom����ek, L., Torii, H., Towell, R. S., Tram, V-N., Tserruya, I., Tsuchimoto, Y., Tuli, S. K., Tydesj��, H., Tyurin, N., Vale, C., Valle, H., van Hecke, H. W., Velkovska, J., V��rtesi, R., Vinogradov, A. A., Virius, M., Vrba, V., Vznuzdaev, E., Wagner, M., Walker, D., Wang, X. R., Watanabe, Y., Wessels, J., White, S. N., Willis, N., Winter, D., Woody, C. L., Wysocki, M., Xie, W., Yamaguchi, Y. L., Yanovich, A., Yasin, Z., Ying, J., Yokkaichi, S., Young, G. R., Younus, I., Yushmanov, I. E., Zajc, W. A., Zaudtke, O., Zhang, C., Zhou, S., Zim��nyi, J., Zolin, L., Lancaster University, Laboratoire SUBATECH Nantes (SUBATECH), Mines Nantes (Mines Nantes)-Université de Nantes (UN)-Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Centre National de la Recherche Scientifique (CNRS), Laboratoire Leprince-Ringuet (LLR), Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-École polytechnique (X)-Centre National de la Recherche Scientifique (CNRS), Institut de Recherches sur les lois Fondamentales de l'Univers (IRFU), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay, Laboratoire de Physique Nucléaire et de Hautes Énergies (LPNHE), Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Université Paris Diderot - Paris 7 (UPD7)-Centre National de la Recherche Scientifique (CNRS), University of Chicago, Institut de Physique Nucléaire d'Orsay (IPNO), Université Paris-Sud - Paris 11 (UP11)-Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Centre National de la Recherche Scientifique (CNRS), Centre de Calcul de l'IN2P3 (CC-IN2P3), Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Centre National de la Recherche Scientifique (CNRS), Sygen International Plc, College of Natural and Applied Sciences, University of Guam, Foundations of Computer Science Laboratory (FCS), Hiroshima University, Department of Water Conservancy [Tianjin], Tianjin Agricultural University (TJAU), University of Kentucky (UK), Laboratoire d'analyse et modélisation de systèmes pour l'aide à la décision (LAMSADE), Université Paris Dauphine-PSL, Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS), Earthquake Research Institute [Tokyo], The University of Tokyo (UTokyo), Biological Disaster Analysis Group, Institut de Mathématiques de Jussieu - Paris Rive Gauche (IMJ-PRG), Université Pierre et Marie Curie - Paris 6 (UPMC)-Université Paris Diderot - Paris 7 (UPD7)-Centre National de la Recherche Scientifique (CNRS), National Institute for Environmental Studies (NIES), Department of Neurology, Yale University [New Haven], University of California Davis - Department of Plant Biology, University of California (UC), Massachusetts General Hospital [Boston], Computer Science and Artificial Intelligence Laboratory [Cambridge] (CSAIL), Massachusetts Institute of Technology (MIT), Laboratoire de Physique Corpusculaire - Clermont-Ferrand (LPC), Université Blaise Pascal - Clermont-Ferrand 2 (UBP)-Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Centre National de la Recherche Scientifique (CNRS), Smithsonian Institution, Department of Environmental Science, Toho University, Mathématiques, Image et Applications - EA 3165 (MIA), La Rochelle Université (ULR), University of York [York, UK], Laboratoire Informatique, Image et Interaction - EA 2118 (L3I), Faculty of Engineering [Nagano], Shinshu University [Nagano], Service d'Endocrinologie [CHRU Nancy], Centre Hospitalier Régional Universitaire de Nancy (CHRU Nancy), Laboratoire de Météorologie Dynamique (UMR 8539) (LMD), Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut national des sciences de l'Univers (INSU - CNRS)-École polytechnique (X)-École des Ponts ParisTech (ENPC)-Centre National de la Recherche Scientifique (CNRS)-Département des Géosciences - ENS Paris, École normale supérieure - Paris (ENS-PSL), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-École normale supérieure - Paris (ENS-PSL), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL), KEK (High energy accelerator research organization), Department of Geography and Environmental Studies, Wilfrid Laurier University (WLU), College of Computing (GATECH), Georgia Institute of Technology [Atlanta], PheniX, Centre National de la Recherche Scientifique (CNRS)-Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Université de Nantes (UN)-Mines Nantes (Mines Nantes), Centre National de la Recherche Scientifique (CNRS)-École polytechnique (X)-Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3), Centre National de la Recherche Scientifique (CNRS)-Université Paris Diderot - Paris 7 (UPD7)-Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Université Pierre et Marie Curie - Paris 6 (UPMC), Centre National de la Recherche Scientifique (CNRS)-Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Université Paris-Sud - Paris 11 (UP11), University of Kentucky, University of California, Université de La Rochelle (ULR), Département des Géosciences - ENS Paris, École normale supérieure - Paris (ENS Paris), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-École normale supérieure - Paris (ENS Paris), and Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)-École des Ponts ParisTech (ENPC)-École polytechnique (X)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)
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Quantitative Biology::Neurons and Cognition ,FOS: Physical sciences ,High Energy Physics::Experiment ,Nuclear Experiment (nucl-ex) ,[PHYS.NEXP]Physics [physics]/Nuclear Experiment [nucl-ex] ,Nuclear Experiment - Abstract
We have studied the dependence of azimuthal anisotropy $v_2$ for inclusive and identified charged hadrons in Au$+$Au and Cu$+$Cu collisions on collision energy, species, and centrality. The values of $v_2$ as a function of transverse momentum $p_T$ and centrality in Au$+$Au collisions at $\sqrt{s_{_{NN}}}$=200 GeV and 62.4 GeV are the same within uncertainties. However, in Cu$+$Cu collisions we observe a decrease in $v_2$ values as the collision energy is reduced from 200 to 62.4 GeV. The decrease is larger in the more peripheral collisions. By examining both Au$+$Au and Cu$+$Cu collisions we find that $v_2$ depends both on eccentricity and the number of participants, $N_{\rm part}$. We observe that $v_2$ divided by eccentricity ($\varepsilon$) monotonically increases with $N_{\rm part}$ and scales as ${N_{\rm part}^{1/3}}$. The Cu$+$Cu data at 62.4 GeV falls below the other scaled $v_{2}$ data. For identified hadrons, $v_2$ divided by the number of constituent quarks $n_q$ is independent of hadron species as a function of transverse kinetic energy $KE_T=m_T-m$ between $0.1, Comment: 424 authors, 22 pages, 22 figures, 6 tables. v2 is the version accepted for publication in Phys. Rev. C. Plain text data tables for the points plotted in figures for this and previous PHENIX publications are (or will be) publicly available at http://www.phenix.bnl.gov/papers.html
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- 2015
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17. Association of color and feeding deterrence by tropical reef fishes
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Francisca Gimenez-Casalduero, Valerie J. Paul, Robert W. Thacker, Universidad de Alicante. Departamento de Ciencias del Mar y Biología Aplicada, University of Guam. Marine Laboratory, and Biología Marina
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Fish feeding behavior ,Entomology ,geography ,education.field_of_study ,Nudibranch ,geography.geographical_feature_category ,biology ,Ecology ,Population ,Aposematism ,Ecología ,biology.organism_classification ,Biochemistry ,Predation ,Learned aversion ,Aposematic coloration ,Chemical defense ,Deterrence (legal) ,Zoología ,education ,Reef ,Ecology, Evolution, Behavior and Systematics - Abstract
While many marine molluscs have been suggested to use aposematic coloration to avoid predation, few studies have tested the ability of marine predators to learn to associate colors with distasteful prey. In field experiments, we tested the ability of two populations of reef fishes to discriminate among red, yellow, and black artificial nudibranch models when one color was paired with a feeding deterrent. We offered fishes (1) the models without any feeding deterrents, (2) the models with a feeding deterrent coated onto one color, and (3) the models without deterrents again. If reef fishes learn to associate colors with noxious prey, we expected the color paired with the feeding deterrent to be eaten less frequently in the final assay than the initial assay. In both populations, fishes formed clear associations between color and feeding deterrence. However, when the experiment was repeated in one population, changing the color paired with the feeding deterrent, fishes did not form an association between color and feeding deterrence. In this case, prior learning may have affected subsequent trials. Our study indicates that common colors of nudibranchs are recognizable by fishes and can be associated with noxious prey.
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- 1999
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18. A major SNP resource for dissection of phenotypic and genetic variation in Pacific white shrimp (Litopenaeus vannamei)
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N. Yu, J. Magrin, John W M Bastiaansen, H. Gong, Dominique Rocha, Alan J. Mileham, H.A.M. van der Steen, Graham Plastow, Daniel C. Ciobanu, J. L. Rocha, N. Deeb, D. H. Jiang, B. Geiger, Brian Kinghorn, Sygen International Plc, Department of Animal Science, University of Nebraska System, Animal Breeding and Genomics Centre, Wageningen University and Research Centre [Wageningen] (WUR), Genus Plc, Genearch Aquacultura Ldta, College of Natural and Applied Sciences, University of Guam, Unité de Génétique Moléculaire Animale (UGMA), Université de Limoges (UNILIM)-Institut National de la Recherche Agronomique (INRA), The Institute of Genetics and Bioinformatics, University of New England (UNE), Department of Agricultural, Food and Nutritional Science, University of Alberta, Abbotswood, StoneBridge Breeding Ltd, This work was supported by an ATP (Biosecure Zero-Exchange Shrimp Technology: BioZEST) of NIST, US Department of Commerce (Cooperative agreement 2001004547A)., Wageningen University and Research [Wageningen] (WUR), Unité de Génétique Moléculaire Animale (UMR GMA), and Institut National de la Recherche Agronomique (INRA)-Université de Limoges (UNILIM)
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Linkage disequilibrium ,growth ,[SDV]Life Sciences [q-bio] ,Litopenaeus ,markers ,selection ,taura-syndrome virus ,Single-nucleotide polymorphism ,association study ,Polymorphism, Single Nucleotide ,Linkage Disequilibrium ,resistance ,03 medical and health sciences ,Gene Frequency ,Penaeidae ,penaeus ,Genetic variation ,Genetics ,Animals ,SNP ,14. Life underwater ,Allele frequency ,030304 developmental biology ,Genetic association ,Expressed Sequence Tags ,0303 health sciences ,Genetic diversity ,pig skeletal-muscle ,biology ,Genetic Variation ,snp ,glycogen-content ,04 agricultural and veterinary sciences ,General Medicine ,biology.organism_classification ,linkage map ,Genetics, Population ,WIAS ,040102 fisheries ,0401 agriculture, forestry, and fisheries ,Animal Science and Zoology ,mutation ,shrimp ,discovery - Abstract
Chantier qualité GA; Bioinformatics and re-sequencing approaches were used for the discovery of sequence polymorphisms in Litopenaeus vannamei. A total of 1221 putative single nucleotide polymorphisms (SNPs) were identified in a pool of individuals from various commercial populations. A set of 211 SNPs were selected for further molecular validation and 88% showed variation in 637 samples representing three commercial breeding lines. An association analysis was performed between these markers and several traits of economic importance for shrimp producers including resistance to three major viral diseases. A small number of SNPs showed associations with test weekly gain, grow-out survival and resistance to Taura Syndrome Virus. Very low levels of linkage disequilibrium were revealed between most SNP pairs, with only 11% of SNPs showing an r2-value above 0.10 with at least one other SNP. Comparison of allele frequencies showed small changes over three generations of the breeding programme in one of the commercial breeding populations. This unique SNP resource has the potential to catalyse future studies of genetic dissection of complex traits, tracing relationships in breeding programmes, and monitoring genetic diversity in commercial and wild populations of L. vannamei.
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- 2010
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19. Mediation of host selection and oviposition behavior in the diamondback moth Plutella xylostella and its predator Chrysoperla carnea by chemical cues from cole crops
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E Tabone, Gadi V. P. Reddy, M.T Smith, University of Guam, Unité Expérimentale Forestière Méditerranéenne (UEFM), Institut National de la Recherche Agronomique (INRA), and University of Delaware [Newark]
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0106 biological sciences ,[SDV.SA]Life Sciences [q-bio]/Agricultural sciences ,plutella xylostella ,Brassica ,lutte biologique ,chrysoperla carnea ,expérience sous serre ,010603 evolutionary biology ,01 natural sciences ,Botany ,brassica oleracea var italica ,Chrysoperla carnea ,carpocapse ,Diamondback moth ,biology ,Host (biology) ,Green leaf volatiles ,interaction hôte pathogène ,Plutella ,biology.organism_classification ,Agricultural sciences ,010602 entomology ,brassica oleracea var gongylodes ,Insect Science ,Brassica oleracea ,lepidoptera ,oviposition ,agent de lutte biologique ,Agronomy and Crop Science ,Chrysopidae ,Sciences agricoles ,contrôle biologique ,brassica oleracea botrytis - Abstract
Host plant-mediated orientation and oviposition by diamondback moth (DBM) Plutella xylostella (L.) (Lepidoptera: Yponomeutidae) and its predator Chrysoperla carnea Stephens (Neuroptera: Chrysopidae) were studied in response to four different brassica host plants: cabbage, (Brassica oleracea L. subsp. capitata), cauliflower (B. oleracea L. subsp. botrytis), kohlrabi (B. oleracea L. subsp. gongylodes), and broccoli (B. oleracea L. subsp. italica). Results from laboratory wind tunnel studies indicated that orientation of female DBM and C. carnea females towards cabbage and cauliflower was significantly greater than towards either broccoli or kohlrabi plants. However, DBM and C. carnea males did not orient towards any of the host plants. In no-choice tests, oviposition by DBM did not differ significantly among the test plants, while C. carnea layed significantly more eggs on cabbage, cauliflower, and broccoli than on kohlrabi. However, in free-choice tests, oviposition by DBM was significantly greater on cabbage, followed by cauliflower, broccoli, and kohlrabi, while C. carnea preferred to oviposit on cabbage and cauliflower, followed by broccoli and kohlrabi. The predation rates of DBM by C. carnea on kohlrabi and broccoli were not significantly different from one another, but were significantly higher than that on cabbage and cauliflower. When two types of plant, intact and injured, were available to adult DBM, female oviposition was significantly greater on injured plant leaves than on intact plants leaves. Similarly, C. carnea oviposition was significantly greater on injured plant leaves than on intact leaves. Implications regarding the possible role of green leaf volatiles in host selection/preference, as well as in tritropic interactions, are discussed. 2003 Elsevier Inc. All rights reserved.
- Published
- 2004
20. Assessing relative resilience potential of coral reefs to inform management
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Serge Planes, Steven Johnson, Jeffrey Maynard, Steven C. McKagan, Elizabeth Mcleod, Peter Houk, Laurie J. Raymundo, Scott F. Heron, Matt Kendall, Dieter Tracey, Gabby N. Ahmadia, Ruben van Hooidonk, Gareth J. Williams, Lyza Johnston, Centre de recherches insulaires et observatoire de l'environnement (CRIOBE), Université de Perpignan Via Domitia (UPVD)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS), Laboratoire d'Excellence CORAIL (LabEX CORAIL), Institut de Recherche pour le Développement (IRD)-Université des Antilles et de la Guyane (UAG)-École des hautes études en sciences sociales (EHESS)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de La Réunion (UR)-Université de la Polynésie Française (UPF)-Université de la Nouvelle-Calédonie (UNC)-Institut d'écologie et environnement-Université des Antilles (UA), SymbioSeas, Southeast Fisheries Science Center (SEFC), NOAA National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric Administration (NOAA)-National Oceanic and Atmospheric Administration (NOAA), Marine Laboratory, University of Guam, Bureau of Environmental and Coastal Quality, Commonwealth of the Northern Mariana Islands (CNMI), WWF, Macaulay Institute, School of Ocean Sciences, Bangor University, National Centers for Coastal Ocean Science (NCCOS), National Ocean Service (NOS), Marine Geophysical Laboratory, James Cook University (JCU), NOAA Center for Satellite Applications and Research (STAR), NOAA National Environmental Satellite, Data, and Information Service (NESDIS), Coral Reef Watch, National Oceanic and Atmospheric Administration (NOAA)-National Oceanic and Atmospheric Administration (NOAA)-NOAA National Environmental Satellite, Data, and Information Service (NESDIS), NOAA Atlantic Oceanographic and Meteorological Laboratory (AOML), National Oceanic and Atmospheric Administration (NOAA), Cooperative Institute for Marine and Atmospheric Studies (CIMAS), Rosenstiel School of Marine and Atmospheric Science (RSMAS), University of Miami [Coral Gables]-University of Miami [Coral Gables], The Nature Conservancy, Inconnu, Université de Perpignan Via Domitia (UPVD)-École Pratique des Hautes Études (EPHE), and Institut de Recherche pour le Développement (IRD)-Université des Antilles et de la Guyane (UAG)-École des hautes études en sciences sociales (EHESS)-École Pratique des Hautes Études (EPHE)
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0106 biological sciences ,Coral reefs ,Environmental management ,010504 meteorology & atmospheric sciences ,Vulnerability ,01 natural sciences ,Ecological resilience ,Climate change ,Ecosystem ,14. Life underwater ,Resilience (network) ,Reef ,Ecology, Evolution, Behavior and Systematics ,Spatial planning ,0105 earth and related environmental sciences ,Nature and Landscape Conservation ,geography ,Connectivity ,geography.geographical_feature_category ,business.industry ,010604 marine biology & hydrobiology ,Environmental resource management ,Coral reef ,Fisheries management ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,business - Abstract
International audience; Ecological resilience assessments are an important part of resilience-based management (RBM) and can help prioritize and target management actions. Use of such assessments has been limited due to a lack of clear guidance on the assessment process. This study builds on the latest scientific advances in RBM to provide that guidance from a resilience assessment undertaken in the Commonwealth of the Northern Mariana Islands (CNMI). We assessed spatial variation in ecological resilience potential at 78 forereef sites near the populated islands of the CNMI: Saipan, Tinian/Aguijan, and Rota. The assessments are based on measuring indicators of resilience processes and are combined with information on anthropogenic stress and larval connectivity. We find great spatial variation in relative resilience potential with many high resilience sites near Saipan (5 of 7) and low resilience sites near Rota (7 of 9). Criteria were developed to identify priority sites for six types of management actions (e.g., conservation, land-based sources of pollution reduction, and fishery management and enforcement) and 51 of the 78 sites met at least one of the sets of criteria. The connectivity simulations developed indicate that Tinian and Aguijan are each roughly 10 × the larvae source that Rota is and twice as frequent a destination. These results may explain the lower relative resilience potential of Rota reefs and indicates that actions in Saipan and Tinian/Aguijan will be important to maintaining supply of larvae. The process we describe for undertaking resilience assessments can be tailored for use in coral reef areas globally and applied to other ecosystems.
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21. Evaluating health status and risks among Native Hawaiian and Pacific Islander communities in Hawai'i: a respondent-driven sampling approach.
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Willingham ML Jr, Teria RS, Dulana L, Badowski G, and Cassel KD
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Purpose: Respondent-driven sampling (RDS) is a sampling method that relies on social networks to recruit hard-to-reach populations, and reduces the bias from non-random selection. This study aimed to assess the efficacy of RDS in collecting health assessment data from underrepresented populations not captured by traditional sampling techniques., Methods: An RDS study was conducted in Hawai'i between 2017 and 2018 of Native Hawaiians, Chuukese, and Marshallese participants. 1006 cases consisting of 352 seeds and 654 recruits were analyzed in conjunction with data from the 2018 Behavioral Risk Factor Surveillance System (BRFSS), filtered to include Native Hawaiian/Other Pacific Islander participants (n = 1564). Missing network size data was imputed by RDSAnalyst and determined by the sample median network size. Weighted samples were compared for differences., Results: Chi-square testing revealed significant differences between the RDS and BRFSS weighted samples across sex, age, education, income, and colon/cervical cancer screening variables. Only BMI group and smoking status exhibited no significant differences. RDS methods recruited participants efficiently within one year., Conclusion: The findings indicate that RDS offers an effective sampling methodology when trying to reach hidden populations and provides more insight into the social networks of underserved communities as the transfer/utilization of health information may be linked to social connectedness., Competing Interests: Declarations. Conflict of interests: The authors declare no competing interests. Ethical approval: All procedures performed in studies involving human participants were in accordance with the ethical standards of the University of Hawaiʻi Office of Research Compliance Human Studies Program approved in January 2017 and with the 1964 Helsinki Declaration and its later amendments or comparable ethical standards. Consent to participate: Informed consent was obtained from all individual participants included in the study., (© 2025. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)
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- 2025
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22. Photosymbiosis shaped animal genome architecture and gene evolution as revealed in giant clams.
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Li R, Leiva C, Lemer S, Kirkendale L, and Li J
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- Animals, Dinoflagellida genetics, Dinoflagellida physiology, Phylogeny, Symbiosis genetics, Bivalvia genetics, Genome, Evolution, Molecular
- Abstract
Symbioses are major drivers of organismal diversification and phenotypic innovation. However, how long-term symbioses shape whole genome evolution in metazoans is still underexplored. Here, we use a giant clam (Tridacna maxima) genome to demonstrate how symbiosis has left complex signatures in an animal's genome. Giant clams thrive in oligotrophic waters by forming a remarkable association with photosymbiotic dinoflagellate algae. Genome-based demographic inferences uncover a tight correlation between T. maxima global population change and major paleoclimate and habitat shifts, revealing how abiotic and biotic factors may dictate T. maxima microevolution. Comparative analyses reveal genomic features that may be symbiosis-driven, including expansion and contraction of immunity-related gene families and a large proportion of lineage-specific genes. Strikingly, about 70% of the genome is composed of repetitive elements, especially transposable elements, most likely resulting from a symbiosis-adapted immune system. This work greatly enhances our understanding of genomic drivers of symbiosis that underlie metazoan evolution and diversification., Competing Interests: Competing interests: The authors declare no competing interests., (© 2025. The Author(s).)
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- 2025
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23. High diversity of crustose coralline algae microbiomes across species and islands, and implications for coral recruits.
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Hochart C, Rouzé H, Rivière B, Ruscheweyh HJ, Hédouin L, Pochon X, Steneck RS, Poulain J, Belser C, Nugues MM, and Galand PE
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Background: Crustose Coralline Algae (CCA) play a crucial role in coral reef ecosystems, contributing significantly to reef formation and serving as substrates for coral recruitment. The microbiome associated with CCAs may promote coral recruitment, yet these microbial communities remain largely understudied. This study investigates the microbial communities associated with a large number of different CCA species across six different islands of French Polynesia, and assess their potential influence on the microbiome of coral recruits., Results: Our findings reveal that CCA harbor a large diversity of bacteria that had not been reported until now. The composition of these microbial communities was influenced by geographic location, and was also closely linked to the host species, identified at a fine taxonomic unit using the 16S rRNA gene of the CCA chloroplast. We demonstrate the usefulness of these ecologically meaningful units that we call CCA chlorotypes. Additionally, we observed a correlation between host phylogeny and microbiome composition (phylosymbiosis) in two CCA species. Contrary to expectations, the CCA microbiome did not act as a microbial reservoir for coral recruits. However, the microbial community of coral recruits varied according to the substrate on which they grew., Conclusions: The study significantly expands the number of characterized CCA microbiomes, and provides new insight into the extensive diversity of these microbial communities. We show distinct microbiomes between and within CCA species, characterized by specific chloroplast 16S rRNA gene sequences. We term these distinct groups "chlorotypes", and demonstrate their utility to differentiate CCA. We also show that only few bacterial taxa were shared between CCA and coral recruits growing in contact with them. Nevertheless, we observed that the microbial community of coral recruits varied depending on the substrate they grew on. We conclude that CCA and their associated bacteria influence the microbiome composition of the coral recruits., Competing Interests: Declarations. Ethics approval and consent to participate: Not applicable. Consent for publication: Not applicable. Competing interests: The authors declare no competing interests., (© 2024. The Author(s).)
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- 2024
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24. Assessment of bacterial communities of Coptotermes gestroi termite workers attacking Ironwood trees ( Casuarina equisetifolia ) in Guam for the presence of Ironwood tree decline-associated pathogens.
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Setia G, Chen J, Schlub R, and Husseneder C
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The Ironwood tree ( Casuarina equisetifolia ) holds a significant ecological role in Guam where a decline in Ironwood trees was first documented in 2002. Studies have linked the Ironwood tree decline (IWTD) to bacteria from the Ralstonia solanacearum complex and wetwood bacteria, specifically Klebsiella oxytoca and Klebsiella variicola . Presence of termites was first found to be associated with IWTD in 2010; however, the role of termites in IWTD is still not clear. The Asian subterranean termite, Coptotermes gestroi (Wasmann) (Blattodea: Rhinotermitidae) frequently attacks Ironwood trees. As workers of this soil-dwelling species of the lower termites harbor a diverse microbial community in their bodies, we examined whether C. gestroi workers carry IWTD-associated bacteria and could, therefore, act as vectors. We described the bacterial community in C. gestroi workers using 16S rRNA gene sequencing and tested the impact of factors related to the location and health of the Ironwood tree the termites were collected from on termite bacterial diversity. Feeding assays were performed to assess if workers show preference in consumption depending on the amount of Ralstonia and wetwood bacteria in the food source. Health of Ironwood trees and level of site management impacted the bacterial composition of C. gestroi termite workers attacking the trees. Although C. gestroi workers equally consumed food sources with high and low Ralstonia and wetwood bacteria load in lab experiments, Ralstonia and other IWTD-related bacteria were not detected in considerable amounts in termite workers collected from trees. Thus, C. gestroi workers are not a vector for bacteria associated with IWTD in Guam., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 Setia, Chen, Schlub and Husseneder.)
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- 2024
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25. Symbiodiniaceae phenotypic traits as bioindicators of acclimatization after coral transplantation.
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Anthony CJ, Lock C, Pérez-Rosales G, Rouzé H, Paulino L Jr, Raymundo LJ, and Bentlage B
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- Animals, Anthozoa physiology, Dinoflagellida physiology, Coral Reefs, Symbiosis, Acclimatization, Phenotype
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Coral-dinoflagellate symbiosis underpins coral reef resilience and influences conservation success, given the relationship's role in coral bleaching. Here, we transplanted Guam's dominant staghorn coral, Acropora pulchra, across four coral gardens and monitored their endosymbiotic dinoflagellates (family Symbiodiniaceae) for ∼15 months (May 2021-August 2022). Transplantation and predation resulted in temporary symbiotic destabilization, as signaled by increased cell roughness and decreased cell density. Eventually, the Symbiodiniaceae phenotypic profile mostly converged with the wild population, although cell density and red fluorescing photopigments remained modified. In March, corals paled, which allowed us to evaluate the Symbiodiniaceae assemblage's relationship with host color. Interestingly, cell density was not the most informative when predicting host color. Instead, fluorescence from antioxidant-associated pigments were most informative. We conclude that Symbiodiniaceae phenotypic traits respond differently depending on the condition, supporting their development as acclimatization bioindicators., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)
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- 2024
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26. Recent trends and biases in mesophotic ecosystem research.
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Radice VZ, Hernández-Agreda A, Pérez-Rosales G, Booker R, Bellworthy J, Broadribb M, Carpenter GE, Diaz C, Eckert RJ, Foster NL, Gijsbers JC, Gress E, Laverick JH, Micaroni V, Pierotti M, Rouzé H, Stevenson A, Sturm AB, and Bongaerts P
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- Animals, Oceans and Seas, Research trends, Anthozoa physiology, Bias, Databases, Factual, Ecosystem
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Mesophotic ecosystems (approx. 30-150 m) represent a significant proportion of the world's oceans yet have long remained understudied due to challenges in accessing these deeper depths. Owing to advances in underwater technologies and a growing scientific and management interest, there has been a major expansion in research of both (sub)tropical mesophotic coral ecosystems and temperate mesophotic ecosystems. Here, we characterize the recent global trends in mesophotic research through an updated release of the 'mesophotic.org' database (www.mesophotic.org) where we reviewed and catalogued 1500 scientific publications. In doing so, we shed light on four major research biases: a gross imbalance in (a) the geographical spread of research efforts, differences in (b) the focal depth range and (c) research fields associated with study organisms and research platforms, and (d) the lack of temporal studies. Overall, we are optimistic about the future of mesophotic research and hope that by highlighting current trends and imbalances, we can raise awareness and stimulate discussion on the future directions of this emerging field.
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- 2024
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27. First records of the roughskin dogfish Centroscymnus owstonii in the greater Antilles, central Caribbean Sea, Western Atlantic Ocean.
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Dixon OFL, Aldridge SE, Kohler JK, Veeder A, Chin P, Fernandes TF, Austin T, Ormond RF, Gore MA, Vaz DFB, and Gallagher AJ
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The roughskin dogfish Centroscymnus owstonii, a deep-sea shark, has a patchy global distribution, with most knowledge stemming from incidentally captured specimens. Using a deep-sea remote lander video system, we observed multiple C. owstonii individuals alive on the footage at 1054 m off Little Cayman, Cayman Islands, Western Atlantic Ocean, marking, to our knowledge, the first record of the species in the Greater Antilles, central Caribbean Sea, while also adding a new species locality record for the Cayman Islands. This study expands our knowledge of the distribution of the roughskin dogfish in the region, and highlights the utility of video lander systems for enhancing and expanding our understanding of the biology and diversity of deep-sea sharks., (© 2024 Fisheries Society of the British Isles.)
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- 2024
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28. Sounds as taxonomic indicators in Holocentrid fishes.
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Banse M, Bertimes E, Lecchini D, Donaldson TJ, Bertucci F, and Parmentier E
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The species-specific character of sounds in the animal kingdom has been extensively documented, yet research on fishes has predominantly focused on a limited number of species, overlooking the potential of acoustic signals to reflect broader taxonomic ranks. In this study, we analyzed acoustic data of hand-held sounds from 388 specimens spanning 5 genera and 33 species within the family Holocentridae, with the objective of evaluating the use of sound characteristics for taxonomic discrimination across various levels (subfamily, genus, species). Sounds could be indicative of grouping. Taxa discriminability depends on taxonomic level; the higher the taxonomic level, the better the discrimination of taxa based on sounds. Analogous to the role of morphological traits in taxonomic delineation, this research corroborates the utility of acoustic features in identifying fish taxa across multiple hierarchical levels. Remarkably, certain holocentrid species have evolved complex sound patterns characterized by unique temporal arrangements where pulses are not continuous but emitted in blocks, facilitating the exploitation of the acoustic space., (© 2024. The Author(s).)
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- 2024
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29. Development and Evaluation of Real-Time Quantitative PCR Assays for Detection of Phellinus noxius Causing Brown Root Rot Disease.
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Liu TY, Chen CH, Ko YC, Wu ZC, Liao TZ, Lee HH, Tsai IJ, Chang TT, Wu ML, Tsai JN, Klopfenstein NB, Kim MS, Stewart JE, Atibalentja N, Brooks FE, Cannon PG, Farid AM, Hattori T, Kwan HS, Ching Lam RY, Ota Y, Sahashi N, Schlub RL, Shuey LS, Tang AMC, and Chung CL
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- DNA, Fungal genetics, Sensitivity and Specificity, Plant Diseases microbiology, Real-Time Polymerase Chain Reaction methods, Basidiomycota genetics, Basidiomycota isolation & purification, Plant Roots microbiology, DNA Primers genetics
- Abstract
Brown root rot disease (BRRD) is a highly destructive tree disease. Early diagnosis of BRRD has been challenging because the first symptoms and signs are often observed after extensive tissue colonization. Existing molecular detection methods, all based on the internal transcribed spacer (ITS) region, were developed without testing against global Phellinus noxius isolates, other wood-decay fungi, or host plant tissues. This study aimed to develop SYBR Green real-time quantitative PCR (qPCR) assays for P. noxius . The primer pair Pn_ITS_F/Pn_ITS_R targets the ITS, and the primer pair Pn_NLR_F/Pn_NLR_R targets a P. noxius -unique group of homologous genes identified through a comparative genomics analysis. The homologous genes belong to the nucleotide-binding-oligomerization-domain-like receptor (NLR) superfamily. The new primer pairs and a previous primer pair G1F/G1R were optimized for qPCR conditions and tested for specificity using 61 global P. noxius isolates, 5 other Phellinus species, and 22 non- Phellinus wood-decay fungal species. Although all three primer pairs could detect as little as 100 fg (approximately 2.99 copies) of P. noxius genomic DNA, G1F/G1R had the highest specificity and Pn_NLR_F/Pn_NLR_R had the highest efficiency. To avoid false positives, the cutoff quantification cycle values were determined as 34 for G1F/G1R, 29 for Pn_ITS_F/Pn_ITS_R, and 32 for Pn_NLR_F/Pn_NLR_R. We further validated these qPCR assays using Ficus benjamina seedlings artificially inoculated with P. noxius , six tree species naturally infected by P. noxius , rhizosphere soil, and bulk soil. The newly developed qPCR assays provide sensitive detection and quantification of P. noxius , which is useful for long-term monitoring of BRRD status., Competing Interests: The author(s) declare no conflict of interest.
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- 2024
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30. Global burden of oral cancer in 2022 attributable to smokeless tobacco and areca nut consumption: a population attributable fraction analysis.
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Rumgay H, Nethan ST, Shah R, Vignat J, Ayo-Yusuf O, Chaturvedi P, Guerra ENS, Gupta PC, Gupta R, Liu S, Magnusson C, Parascandola M, Paulino YC, Rezaei N, Siddiqi K, Warnakulasuriya S, Lauby-Secretan B, and Soerjomataram I
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- Humans, Male, Female, Middle Aged, Adult, Global Health, Aged, Incidence, Prevalence, Risk Factors, Young Adult, Adolescent, Tobacco, Smokeless adverse effects, Mouth Neoplasms epidemiology, Mouth Neoplasms chemically induced, Mouth Neoplasms etiology, Areca adverse effects
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Background: Consuming products that contain smokeless tobacco or areca nut increases the risk of oral cancer. We aimed to estimate the burden of oral cancer attributable to smokeless tobacco or areca nut consumption globally and by type of smokeless tobacco or areca nut product in four major consuming countries., Methods: We calculated population attributable fractions (PAFs) using prevalence of current use of smokeless tobacco or areca nut products from national surveys and corresponding risks of oral cancer from the literature. We applied PAFs to national estimates of oral cancer incidence in 2022 from the Global Cancer Observatory's Cancer Today database to obtain cases attributable to smokeless tobacco or areca nut consumption. We modelled 95% uncertainty intervals (UIs) using Monte Carlo simulations., Findings: Globally, an estimated 120 200 (95% UI 115 300-124 300) cases of oral cancer diagnosed in 2022 were attributable to smokeless tobacco or areca nut consumption, accounting for 30·8% (95% UI 29·6-31·9) of all oral cancer cases (120 200 of 389 800). An estimated 77% of attributable cases were among male patients (92 600 cases, 95% UI 88 000-96 500) and 23% were among female patients (27 600 cases, 26 000-29 000). Regions with the highest PAFs were Melanesia, Micronesia, and Polynesia (78·6%, 95% UI 74·4-80·5), southcentral Asia (57·5%, 54·8-59·5), and southeastern Asia (19·8%, 19·0-20·6). Lower-middle-income countries represented 90·2% of the world total attributable cases (108 400 cases, 95% UI 103 400-112 200)., Interpretation: Our findings suggest that one in three cases of oral cancer globally are attributable to smokeless tobacco or areca nut consumption, and could be prevented through smokeless tobacco and areca nut control. Global cancer control efforts must incorporate further measures to reduce smokeless tobacco and areca nut consumption in populations with the largest attributable burden., Funding: French National Cancer Institute., Competing Interests: Declaration of interests PCG receives a monthly salary as Director of Healis Sekhsaria Institute for Public Health, Navi Mumbai, India. YCP has received funding from National Cancer Institute, National Institutes of Health and is Chairperson of the Guam Cancer Trust Fund. KS has received funding from the National Institute for Health & Social Care and Medical Research Council UK. All other authors declare no competing interests., (Copyright © 2024 World Health Organization. Published by Elsevier Ltd. All rights reserved, including those for text and data mining, AI training, and similar technologies.)
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- 2024
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31. An integrative phylogeography for inferring cryptic speciation in the Alpheus lottini species complex, an important coral mutualist.
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Rouzé H, Knowlton N, Anker A, Hurt C, Wirshing HH, Van Wormhoudt A, and Leray M
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We use molecular analyses, color patterns, and records of distribution of mating pairs to reconstruct the global phylogeography of Alpheus lottini , a complex of cryptic coral-associated snapping shrimp species. Molecular data support the delineation of ancestral clades A, B, and C, and suggest five additional subdivisions within clades A and B. Clades A, B1, B2, and C exhibit color pattern differences and/or evidence of assortative mating, and thus merit species-level recognition. There is no evidence for assortative mating within clades A and B1, with likely reproductive compatibility (i.e., fertile clutches) in areas of sympatry. The clade diversity peaks in the Mariana Islands and the early branching clade C is restricted to the northern periphery of the Central and Western Pacific suggesting a Pacific origin of this group outside of the Coral Triangle. These findings underscore the prevalence of allopatric processes with possible ecological or microallopatric speciation in areas where clades overlap., Competing Interests: All authors had no conflict of interest to declare.
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- 2024
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32. First report of Erwinia papayae associated with papaya mushy canker disease in Guam.
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Delorm JG and Dulla GFJ
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Carica papaya (papaya) in Guam, USA may experience soft rot symptoms, often referred to as mushy canker disease. Disease symptoms first appear as expanding water-soaked dark-green stem lesions or leaf spotting with chlorotic halos. Defoliation at petiole-stem junctions and crown necrosis leads to plant death. Papaya diseases caused by Erwinia spp. are documented in nearby tropic regions such as the Northern Mariana Islands (Trujillo and Schroth 1982), the Philippines (Dela Cueva et al. 2017), Japan (Hanagasaki et al. 2020), and Indonesia (Suharjo et al., 2021). The pathogen was isolated from symptomatic papaya stem sections (cv. Red Lady) from a nursery at the University of Guam Agriculture and Life Sciences building in April 2023. Approximately 20% of seedlings collapsed from stem soft rot, with nearly all plants showing varying degrees of water-soaked lesions on leaves or stems. Stem tissue from lesion margins was excised, surface sterilized with 70% EtOH, and macerated in sterile water. Macerate was plated onto nutrient agar (NA) and incubated at 28°C, yielding colonies that were clear to white in color, smooth, circular and mucoid on NA plates for five suspect isolates (JGD231-235). Strains produced blue diffusible pigment on King's B (KB) media, were Gram-negative rods, and exhibited swimming motility on semi-solid (0.5% agar) NA plates. Crown stab inoculation of ten papaya plants (cv. Red Lady) with isolates resulted in mushy canker symptoms within seven days, while negative control plants stabbed with a sterile probe remained asymptomatic. Koch's postulates were fulfilled by drench-inoculating spontaneous rifampicin-resistant (100µg/ml) mutants, JGD233r and JGD235r, onto ten papaya plants (cv. Solo Sunrise). Nine days post-inoculation, bacterial strains were recovered from symptomatic stem tissue macerate plated on rifampicin (100µg/ml) NA and incubated at 28°C. No symptoms or bacterial cells were recovered from the tissue of negative control plants. Cell morphology, culture phenotypes, and disease symptoms suggested the isolates were Erwinia spp., and blue pigment production on KB further suggested E. papayae (Gardan et al. 2004). Partial 16S rDNA sequences of Guam strains JGD231-235 (sequenced using PCR forward primer 5' - AGAGTTTGATCMTGGCTCAG - 3' and reverse primer 5' - GGTTACCTTGTTACGACTT - 3', GENEWIZ (South Plainfield, NJ)) were deposited into GenBank (OR577627- 631). Highest NCBI BLAST results for all strains showed a 16S rDNA sequence identity of 98.17-98.91% with those of Erwinia sp. I-leaf (LC590218) and E. mallotivora BT-MARDI (HQ456230). A maximum likelihood phylogenetic tree based on concatenated partial atpD , infB , and rpoB sequences of strains JGD232 (PP669340, PP669346, PP669343), JGD233 (PP669341, PP669347, PP669344), and JGD235 (PP669342, PP669348, PP669345) (Brady et al. 2008) constructed using MEGA11 (Tamura et al. 2021) showed all strains formed a monophyletic group with Erwinia sp. I-leaf (Hanagasaki et al. 2020) and E. papayae NCPPB 4294T (Gardan et al. 2004), supported with 98% bootstrap. This note documents the first occurrence of E. papayae as a papaya pathogen in Guam. Papaya cultivation supports sustainable food security for Guam (Bevacqua and Sayama 2023), and Erwinia spp. pathogens threaten papaya on other Pacific islands like Hawaii. These findings convey the need for effective quarantine practices, local disease management, and further research on this pathogen.
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- 2024
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33. Author Correction: Production of sounds by squirrelfish during symbiotic relationships with cleaner wrasses.
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Banse M, Lecchini D, Sabbe J, Hanssen N, Donaldson T, Iwankow G, Lagant A, and Parmentier E
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- 2024
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34. Whip black corals (Antipatharia: Antipathidae: Stichopathes) of the Mesophotic Coral Ecosystem of Mo'orea (French Polynesia), with the description of a new species.
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Terrana L, Rouzé H, Opresko DM, Consortium UTP, Eeckhaut I, Dubois P, Hédouin L, and Godefroid M
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- Animals, Polynesia, Phylogeny, Body Size, Animal Structures anatomy & histology, Animal Structures growth & development, Organ Size, Anthozoa, Ecosystem, Animal Distribution
- Abstract
Black corals are key species of marine ecosystems. They can be found in dense aggregations worldwide, but some parts of the world remain totally unexplored. This is the case of the Mesophotic Coral Ecosystem of Mo'orea where the Under the Pole scientific expedition explored mesophotic ecosystems between 60 and 120 m depth and focused on whip black corals. A total of 64 specimens were analyzed morphologically and genetically, and all belonged to the genus Stichopathes. Among them, we describe the new species Stichopathes desaturata sp. nov. It is characterized by an unbranched corallum, irregularly sinuous, with a basal diameter not exceeding 1 mm, reaching a dozen of cm in height. The polyps measure 0.50-1.0 mm in transverse diameter, the interpolypar space is well defined and up to 0.50 mm, with 6-8 polyps per cm. The polypar spines are taller than abpolypar spines, reaching 0.13 mm, perpendicular to the corallum, and conical with a pointed tip, with round and/or elongated papillae on two thirds of the spine. The abpolypar spines are conical to triangular, inclined upwards, with the same ornamentation as the polypar spines. We also identified specimens assigned as Stichopathes cf. contorta and four other putative species. Genetic analyses showed that Mo'orea specimens grouped in three different clades. Analyses of endosymbionts showed that the association with Symbiodiniaceae was likely not involved in the process of host species delineation.
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- 2024
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35. Genomic data reveals habitat partitioning in massive Porites on Guam, Micronesia.
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Primov KD, Burdick DR, Lemer S, Forsman ZH, and Combosch DJ
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- Animals, Guam, Genomics methods, Micronesia, Anthozoa genetics, Ecosystem, Coral Reefs, Phylogeny
- Abstract
Corals in marginal reef habitats generally exhibit less bleaching and associated mortality compared to nearby corals in more pristine reef environments. It is unclear, however, if these differences are due to environmental differences, including turbidity, or genomic differences between the coral hosts in these different environments. One particularly interesting case is in the coral genus Porites, which contains numerous morphologically similar massive Porites species inhabiting a wide range of reef habitats, from turbid river deltas and stagnant back reefs to high-energy fore reefs. Here, we generate ddRAD data for 172 Porites corals from river delta and adjacent (<0.5 km) fore reef populations on Guam to assess the extent of genetic differentiation among massive Porites corals in these two contrasting environments and throughout the island. Phylogenetic and population genomic analyses consistently identify seven different clades of massive Porites, with the two largest clades predominantly inhabiting either river deltas or fore reefs, respectively. No population structure was detected in the two largest clades, and Cladocopium was the dominant symbiont genus in all clades and environments. The perceived bleaching resilience of corals in marginal reefs may therefore be attributed to interspecific differences between morphologically similar species, in addition to potentially mediating environmental differences. Marginal reef environments may therefore not provide a suitable refuge for many reef corals in a heating world, but instead host additional cryptic coral diversity., (© 2024. The Author(s).)
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- 2024
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36. Global patterns and drivers of fish reproductive potential on coral reefs.
- Author
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Hadj-Hammou J, Cinner JE, Barneche DR, Caldwell IR, Mouillot D, Robinson JPW, Schiettekatte NMD, Siqueira AC, Taylor BM, and Graham NAJ
- Subjects
- Animals, Biomass, Conservation of Natural Resources, Female, Fisheries, Fertility physiology, Ecosystem, Coral Reefs, Fishes physiology, Reproduction physiology
- Abstract
Fish fecundity scales hyperallometrically with body mass, meaning larger females produce disproportionately more eggs than smaller ones. We explore this relationship beyond the species-level to estimate the "reproductive potential" of 1633 coral reef sites distributed globally. We find that, at the site-level, reproductive potential scales hyperallometrically with assemblage biomass, but with a smaller median exponent than at the species-level. Across all families, modelled reproductive potential is greater in fully protected sites versus fished sites. This difference is most pronounced for the important fisheries family, Serranidae. When comparing a scenario where 30% of sites are randomly fully protected to a current protection scenario, we estimate an increase in the reproductive potential of all families, and particularly for Serranidae. Such results point to the possible ecological benefits of the 30 × 30 global conservation target and showcase management options to promote the sustainability of population replenishment., (© 2024. The Author(s).)
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- 2024
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37. The genome sequence of the heart cockle, Fragum sueziense (Issel, 1869).
- Author
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Li R, Li J, Lemer S, Lopez JV, Oatley G, Sinclair E, Clayton-Lucey IA, Aunin E, Gettle N, Santos C, Paulini M, Niu H, McKenna V, and O'Brien R
- Abstract
We present a genome assembly from an individual Fragum sueziense (the heart cockle; Mollusca; Bivalvia; Cardiida; Cardiidae). The genome sequence is 1,206.1 megabases in span. Most of the assembly is scaffolded into 19 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 92.77 kilobases in length. Gene annotation of this assembly on Ensembl identified 70,309 protein-coding genes., Competing Interests: No competing interests were disclosed., (Copyright: © 2024 Li R et al.)
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- 2024
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38. Two new species and a new record of infaunal crabs (Decapoda: Brachyura: Pinnotheridae and Varunidae) from Oman and Saudi Arabia.
- Author
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Jr RML, Anker A, and Naruse T
- Subjects
- Animals, Male, Saudi Arabia, Oman, Female, Ecosystem, Organ Size, Animal Structures anatomy & histology, Animal Structures growth & development, Brachyura classification, Brachyura anatomy & histology, Animal Distribution, Body Size
- Abstract
Recent surveys of shallow subtidal soft-bottom habitats of Oman and the Red Sea coast of Saudi Arabia have uncovered several crabs new to science. Stemming from these efforts, two crab species are herein described as new to science. The first is a new pinnotherid crab, Indopinnixa arabica n. sp., from northern Oman. The other is a new species of varunid crab, Gopkittisak ngankeeae n. sp., from northern, eastern and southern Oman. Additionally, the first known males of another varunid crab, Brankocleistostoma fossulum (Barnard, 1955), are described and illustrated based on material from eastern Oman and southern Saudi Arabia, also representing a new record of the species for the Arabian region.
- Published
- 2024
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39. Transcriptomic signatures across a critical sedimentation threshold in a major reef-building coral.
- Author
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Lock C, Gabriel MM, and Bentlage B
- Abstract
Sedimentation is a major cause of global near-shore coral reef decline. Although the negative impacts of sedimentation on coral reef community composition have been well-documented, the effects of sedimentation on coral metabolism in situ have received comparatively little attention. Using transcriptomics, we identified gene expression patterns changing across a previously defined sedimentation threshold that was deemed critical due to changes in coral cover and community composition. We identified genes, pathways, and molecular processes associated with this transition that may allow corals, such as Porites lobata , to tolerate chronic, severe sedimentation and persist in turbid environments. Alternative energy generation pathways may help P. lobata maintain a persistent stress response to survive when the availability of light and oxygen is diminished. We found evidence for the expression of genes linked to increased environmental sensing and cellular communication that likely allow P. lobata to efficiently respond to sedimentation stress and associated pathogen challenges. Cell damage increases under stress; consequently, we found apoptosis pathways over-represented under severe sedimentation, a likely consequence of damaged cell removal to maintain colony integrity. The results presented here provide a framework for the response of P. lobata to sedimentation stress under field conditions. Testing this framework and its related hypotheses using multi-omics approaches can deepen our understanding of the metabolic plasticity and acclimation potential of corals to sedimentation and their resilience in turbid reef systems., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 Lock, Gabriel and Bentlage.)
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- 2024
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40. Invertebrate sounds from photic to mesophotic coral reefs reveal vertical stratification and diel diversity.
- Author
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Raick X, Parmentier É, Gervaise C, Lecchini D, Pérez-Rosales G, Rouzé H, Bertucci F, and Di Iorio L
- Subjects
- Animals, Polynesia, Acoustics, Anthozoa physiology, Coral Reefs, Invertebrates physiology, Sound, Biodiversity
- Abstract
Although mesophotic coral ecosystems account for approximately 80% of coral reefs, they remain largely unexplored due to their challenging accessibility. The acoustic richness within reefs has led scientists to consider passive acoustic monitoring as a reliable method for studying both altiphotic and mesophotic coral reefs. We investigated the relationship between benthic invertebrate sounds (1.5-22.5 kHz), depth, and benthic cover composition, key ecological factors that determine differences between altiphotic and mesophotic reefs. Diel patterns of snaps and peak frequencies were also explored at different depths to assess variations in biorhythms. Acoustic recorders were deployed at 20 m, 60 m, and 120 m depths across six islands in French Polynesia. The results indicated that depth is the primary driver of differences in broadband transient sound (BTS) soundscapes, with sound intensity decreasing as depth increases. At 20-60 m, sounds were louder at night. At 120 m depth, benthic activity rhythms exhibited low or highly variable levels of diel variation, likely a consequence of reduced solar irradiation. On three islands, a peculiar peak in the number of BTS was observed every day between 7 and 9 PM at 120 m, suggesting the presence of cyclic activities of a specific species. Our results support the existence of different invertebrate communities or distinct behaviors, particularly in deep mesophotic reefs. Overall, this study adds to the growing evidence supporting the use of passive acoustic monitoring to describe and understand ecological patterns in mesophotic reefs., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2024
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41. Latitudinal variation in thermal performance of the common coral Pocillopora spp.
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Edmunds PJ, Combosch DJ, Torrado H, Sakai K, Sinniger F, and Burgess SC
- Subjects
- Animals, Seasons, Seawater chemistry, Anthozoa physiology, Temperature, Photosynthesis physiology
- Abstract
Understanding how tropical corals respond to temperatures is important to evaluating their capacity to persist in a warmer future. We studied the common Pacific coral Pocillopora over 44° of latitude, and used populations at three islands with different thermal regimes to compare their responses to temperature using thermal performance curves (TPCs) for respiration and gross photosynthesis. Corals were sampled in the local autumn from Moorea, Guam and Okinawa, where mean±s.d. annual seawater temperature is 28.0±0.9°C, 28.9±0.7°C and 25.1±3.4°C, respectively. TPCs for respiration were similar among latitudes, the thermal optimum (Topt) was above the local maximum temperature at all three islands, and maximum respiration was lowest at Okinawa. TPCs for gross photosynthesis were wider, implying greater thermal eurytopy, with a higher Topt in Moorea versus Guam and Okinawa. Topt was above the maximum temperature in Moorea, but was similar to daily temperatures over 13% of the year in Okinawa and 53% of the year in Guam. There was greater annual variation in daily temperatures in Okinawa than Guam or Moorea, which translated to large variation in the supply of metabolic energy and photosynthetically fixed carbon at higher latitudes. Despite these trends, the differences in TPCs for Pocillopora spp. were not profoundly different across latitudes, reducing the likelihood that populations of these corals could better match their phenotypes to future more extreme temperatures through migration. Any such response would place a premium on high metabolic plasticity and tolerance of large seasonal variations in energy budgets., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2024. Published by The Company of Biologists Ltd.)
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- 2024
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42. Forms of Peer Victimization and School Adjustment Among Japanese Adolescents: A Multilevel Analysis.
- Author
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Kawabata Y
- Subjects
- Humans, Female, Male, Adolescent, Japan, Adolescent Behavior psychology, Interpersonal Relations, East Asian People, Peer Group, Crime Victims psychology, Crime Victims statistics & numerical data, Bullying statistics & numerical data, Bullying psychology, Schools, Students psychology, Students statistics & numerical data, Multilevel Analysis, Social Adjustment
- Abstract
The psychosocial correlates and consequences of peer victimization are well documented. However, there is limited knowledge about whether different forms of peer victimization (relational and physical) are predictive of school-based social and motivational factors among adolescents from non-Western cultures. The present study examined the relationship between individual and school-level forms of peer victimization and school adjustment among Japanese adolescents, and the mediating role that these factors may play. The Japanese sample (N = 6109 from 185 schools, M
age = 15.78, SD = 0.29, 51% girls and 49% boys) was drawn from a large international dataset, the Organization for Economic Cooperation and Development (OECD) Programme for International Student Assessment (PISA) 2018. Results showed that school-level relational victimization was associated with individual-level relational victimization, and school-level physical victimization was associated with individual-level physical victimization, after controlling for age, gender, and socioeconomic status. Individual-level relational victimization was also uniquely associated with indices of school adjustment (negative affect, positive affect, and fear of failure) over and above physical victimization. While controlling for relational victimization, individual-level physical victimization was associated with indices of school adjustment (positive affect and meaning in life). In further findings, school-level relational and physical victimization were indirectly, but not directly, related to some of students' school adjustment through individual-level relational and physical victimization. These parallel and differential associations suggest the importance of considering the role of relational and physical victimization in school adjustment among Japanese adolescents., (© 2024. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)- Published
- 2024
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43. Multi-Factor Coral Disease Risk: A new product for early warning and management.
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Caldwell JM, Liu G, Geiger E, Heron SF, Eakin CM, De La Cour J, Greene A, Raymundo L, Dryden J, Schlaff A, Stella JS, Kindinger TL, Couch CS, Fenner D, Hoot W, Manzello D, and Donahue MJ
- Subjects
- Animals, Risk Assessment methods, Forecasting, Conservation of Natural Resources methods, Australia, Environmental Monitoring methods, Models, Biological, Anthozoa, Coral Reefs
- Abstract
Ecological forecasts are becoming increasingly valuable tools for conservation and management. However, there are few examples of near-real-time forecasting systems that account for the wide range of ecological complexities. We developed a new coral disease ecological forecasting system that explores a suite of ecological relationships and their uncertainty and investigates how forecast skill changes with shorter lead times. The Multi-Factor Coral Disease Risk product introduced here uses a combination of ecological and marine environmental conditions to predict the risk of white syndromes and growth anomalies across reefs in the central and western Pacific and along the east coast of Australia and is available through the US National Oceanic and Atmospheric Administration Coral Reef Watch program. This product produces weekly forecasts for a moving window of 6 months at a resolution of ~5 km based on quantile regression forests. The forecasts show superior skill at predicting disease risk on withheld survey data from 2012 to 2020 compared with predecessor forecast systems, with the biggest improvements shown for predicting disease risk at mid- to high-disease levels. Most of the prediction uncertainty arises from model uncertainty, so prediction accuracy and precision do not improve substantially with shorter lead times. This result arises because many predictor variables cannot be accurately forecasted, which is a common challenge across ecosystems. Weekly forecasts and scenarios can be explored through an online decision support tool and data explorer, co-developed with end-user groups to improve use and understanding of ecological forecasts. The models provide near-real-time disease risk assessments and allow users to refine predictions and assess intervention scenarios. This work advances the field of ecological forecasting with real-world complexities and, in doing so, better supports near-term decision making for coral reef ecosystem managers and stakeholders. Secondarily, we identify clear needs and provide recommendations to further enhance our ability to forecast coral disease risk., (© 2024 The Authors. Ecological Applications published by Wiley Periodicals LLC on behalf of The Ecological Society of America.)
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- 2024
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44. A Longitudinal Study of Forms of Peer Victimization and Internalizing Problems in Adolescence.
- Author
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Kawabata Y, Kinoshita M, and Onishi A
- Subjects
- Humans, Female, Male, Adolescent, Longitudinal Studies, Child, Japan epidemiology, Adolescent Behavior psychology, Interpersonal Relations, Peer Group, Crime Victims psychology, Crime Victims statistics & numerical data, Bullying psychology, Bullying statistics & numerical data
- Abstract
The present study examined developmental changes in forms of peer victimization and longitudinal associations between forms of peer victimization and internalizing problems among Japanese adolescents. Participants were 271 students (Time 1 M age = 12.72, SD = 0.45, 50% girls) from 9 classrooms and 2 public middle schools in Japan. Data were collected at five time points from 7th to 9th grade. Growth curve modeling (GCM) of mean changes indicated that relational victimization and internalizing problems decreased over three school years. Overt victimization first decreased and then remained relatively constant toward the end of the assessment. In addition, the results of the Random Intercept Cross-Lagged Panel Model (RI-CLPM) indicated that the random intercept of relational victimization was positively and strongly correlated with that of internalizing problems. Although the random intercept of overt victimization was positively correlated with that of internalizing problems, the effect size was small to moderate. In general, there were no significant within-person changes between relational and overt victimization and internalizing problems. However, some exceptions were noted towards the end of middle school, such that higher relational victimization was associated with increases in internalizing problems, which in turn led to more relational victimization. There were no gender differences in the above trajectories or in the transactional models. The findings regarding at-risk youth who are vulnerable to relational and overt victimization are discussed from clinical, cultural, and developmental perspectives., (© 2024. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2024
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45. Publisher Correction: Invertebrate sounds from photic to mesophotic coral reefs reveal vertical stratification and diel diversity.
- Author
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Raick X, Parmentier É, Gervaise C, Lecchini D, Pérez-Rosales G, Rouzé H, Bertucci F, and Di Iorio L
- Published
- 2024
- Full Text
- View/download PDF
46. Seasonal dynamics and environmental drivers of tissue and mucus microbiomes in the staghorn coral Acropora pulchra .
- Author
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Miller TC and Bentlage B
- Subjects
- Animals, Mucus microbiology, Seawater microbiology, Bacteria classification, Bacteria genetics, Bacteria isolation & purification, Anthozoa microbiology, Microbiota physiology, Microbiota genetics, Seasons, Coral Reefs
- Abstract
Background: Rainfall-induced coastal runoff represents an important environmental impact in near-shore coral reefs that may affect coral-associated bacterial microbiomes. Shifts in microbiome community composition and function can stress corals and ultimately cause mortality and reef declines. Impacts of environmental stress may be site specific and differ between coral microbiome compartments ( e.g ., tissue versus mucus). Coastal runoff and associated water pollution represent a major stressor for near-shore reef-ecosystems in Guam, Micronesia., Methods: Acropora pulchra colonies growing on the West Hagåtña reef flat in Guam were sampled over a period of 8 months spanning the 2021 wet and dry seasons. To examine bacterial microbiome diversity and composition, samples of A. pulchra tissue and mucus were collected during late April, early July, late September, and at the end of December. Samples were collected from populations in two different habitat zones, near the reef crest (farshore) and close to shore (nearshore). Seawater samples were collected during the same time period to evaluate microbiome dynamics of the waters surrounding coral colonies. Tissue, mucus, and seawater microbiomes were characterized using 16S DNA metabarcoding in conjunction with Illumina sequencing. In addition, water samples were collected to determine fecal indicator bacteria (FIB) concentrations as an indicator of water pollution. Water temperatures were recorded using data loggers and precipitation data obtained from a nearby rain gauge. The correlation structure of environmental parameters (temperature and rainfall), FIB concentrations, and A. pulchra microbiome diversity was evaluated using a structural equation model. Beta diversity analyses were used to investigate spatio-temporal trends of microbiome composition., Results: Acropora pulchra microbiome diversity differed between tissues and mucus, with mucus microbiome diversity being similar to the surrounding seawater. Rainfall and associated fluctuations of FIB concentrations were correlated with changes in tissue and mucus microbiomes, indicating their role as drivers of A. pulchra microbiome diversity. A. pulchra tissue microbiome composition remained relatively stable throughout dry and wet seasons; tissues were dominated by Endozoicomonadaceae , coral endosymbionts and putative indicators of coral health. In nearshore A. pulchra tissue microbiomes, Simkaniaceae , putative obligate coral endosymbionts, were more abundant than in A. pulchra colonies growing near the reef crest (farshore). A. pulchra mucus microbiomes were more diverse during the wet season than the dry season, a distinction that was also associated with drastic shifts in microbiome composition. This study highlights the seasonal dynamics of coral microbiomes and demonstrates that microbiome diversity and composition may differ between coral tissues and the surface mucus layer., Competing Interests: The authors declare that they have no competing interests., (© 2024 Miller and Bentlage.)
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- 2024
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47. Ethnic disparities in early-onset colorectal cancer incidence, screening rates and risk factors prevalence in Guam.
- Author
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Badowski G, Teria R, Nagata M, Legaspi J, Dulana LJB, Bordallo R, and Hernandez BY
- Abstract
Objective: Colorectal cancer (CRC) is one of the four most common cancers and the third leading cause of cancer-related deaths in Guam. This study investigated CRC incidence, screening, and risk factors of early onset CRC across Guam's ethnic groups using data from the Guam Cancer Registry (1998-2020) and the Guam Behavioral Risk Factor Surveillance System (2018-2019)., Methods: Incidence rate ratios (IRRs) were calculated to compare incidence rates across different age groups stratified by sex, ethnicity, and stage. Incidence rate differences (IRDs) were used to test for significant differences across sex and ethnicity. The Pearson chi-square test was used to assess differences in CRC screening rates by age, sex, education, income, healthcare coverage, and ethnicity, and to examine ethnic group disparities in the prevalence of CRC risk factors., Results: The steepest increase in CRC incidence was observed between the 35-39 and 40-44 age groups (IRR = 2.01; 95 % CI: 1.14-3.53) and between the 40-44 and 45-49 age groups (IRR = 1.99; 95 % CI: 1.34-2.97). CHamorus exhibited rate increases at younger ages compared to Filipinos. CRC screening prevalence and associated risk factors showed considerable variation among ethnicities., Conclusions: Elevated early-onset CRC rates were observed for both CHamorus and the broader Guam population under 50. The findings support the new recommendation to begin screening at age 45 and efforts to increase screening in Guam., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Published by Elsevier Inc.)
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- 2024
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48. Proportion and Correlates of Children in the US-Affiliated Pacific Region Meeting Sleep, Screen Time, and Physical Activity Guidelines.
- Author
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Ryan ST, Okely AD, Chong KH, Stanley RM, Randle M, Waqa G, Yamanaka AB, Guerrero RL, Coleman P, Shallcross L, Wilkens LR, Deenik JL, and Novotny R
- Subjects
- Humans, Female, Male, Child, Cross-Sectional Studies, Child, Preschool, Sedentary Behavior, Guidelines as Topic, Pacific Islands, Socioeconomic Factors, Sociodemographic Factors, United States, Screen Time, Exercise, Sleep, Accelerometry
- Abstract
Introduction: Limited data on 24-hour movement behaviors of children aged 5-8 years exist globally. We describe the prevalence and sociodemographic associations of meeting physical activity (PA), sedentary recreational screen time (ST), and sleep guidelines among children from 11 jurisdictions in the US-Affiliated Pacific region., Methods: Cross-sectional representative data from 1192 children aged 5-8 years living in the US-Affiliated Pacific region were drawn from the baseline 2012-2014 Children's Healthy Living Program. Sleep and moderate- to vigorous-intensity PA were calculated from accelerometry. ST and sociodemographic data were collected from caregiver surveys. The percentage of children meeting the Asia-Pacific 24-hour movement guidelines for PA (≥60 min/d of moderate- to vigorous-intensity PA), sleep (≥9 and ≤ 11 h/d) and ST (≤2 h/d) were calculated. Generalized linear mixed models were used to examine associations with adiposity and sociodemographic variables., Results: Twenty-seven percent (95% confidence interval, 24.6-30.0) of children met integrated guidelines; 98% (96.2-98.0) met PA, 78% (75.4-80.0) met sleep, and 35% (32.6-38.0) met ST guidelines. Females (adjusted odds ratio = 1.40 [95% confidence interval, 1.03-1.91]) and those living in lower-middle-income jurisdictions (2.29 [1.49-3.54]) were more likely to meet ST guidelines. Overweight children (0.62 [0.40-0.96]), those aged 8 years (0.39 [0.22-0.69]), and children with caregivers of an education level of high school or beyond (0.44 [0.29-0.68]) were less likely to achieve ST guidelines. Children from midrange annual household incomes were less likely to meet combined guidelines (0.60 [0.39-0.92])., Conclusions: Three-quarters of children are not meeting integrated Asia-Pacific 24-hour movement guidelines. Future strategies for reducing ST and increasing integrated guidelines compliance are needed.
- Published
- 2024
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49. Production of sounds by squirrelfish during symbiotic relationships with cleaner wrasses.
- Author
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Banse M, Lecchini D, Sabbe J, Hanssen N, Donaldson T, Iwankow G, Lagant A, and Parmentier E
- Subjects
- Animals, Fishes physiology, Sound, Acoustics, Vocalization, Animal physiology, Animal Communication, Coral Reefs, Pacific Ocean, Polynesia, Perciformes physiology, Symbiosis physiology
- Abstract
Examples of symbiotic relationships often include cleaning mutualisms, typically involving interactions between cleaner fish and other fish, called the clients. While these cleaners can cooperate by removing ectoparasites from their clients, they can also deceive by feeding on client mucus, a behavior usually referred to as "cheating behavior" that often leads to a discernible jolt from the client fish. Despite extensive studies of these interactions, most research has focused on the visual aspects of the communication. In this study, we aimed to explore the role of acoustic communication in the mutualistic relationship between cleaner fishes and nine holocentrid client species across four regions of the Indo-Pacific Ocean: French Polynesia, Guam, Seychelles, and the Philippines. Video cameras coupled with hydrophones were positioned at various locations on reefs housing Holocentridae fish to observe their acoustic behaviors during interactions. Our results indicate that all nine species of holocentrids can use acoustic signals to communicate to cleaner fish their refusal of the symbiotic interaction or their desire to terminate the cooperation. These sounds were predominantly observed during agonistic behavior and seem to support visual cues from the client. This study provides a novel example of acoustic communication during a symbiotic relationship in teleosts. Interestingly, these vocalizations often lacked a distinct pattern or structure. This contrasts with numerous other interspecific communication systems where clear and distinguishable signals are essential. This absence of a clear acoustic pattern may be because they are used in interspecific interactions to support visual behavior with no selective pressure for developing specific calls required in conspecific recognition. The different sound types produced could also be correlated with the severity of the client response. There is a need for further research into the effects of acoustic behaviors on the quality and dynamics of these mutualistic interactions., (© 2024. The Author(s).)
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- 2024
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50. Validating Constructs of the Depression, Anxiety, and Stress Scale-21 and Exploring Health Indicators to Predict the Psychological Outcomes of Students Enrolled in the Pacific Islands Cohort of College Students.
- Author
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Kim RH, Paulino YC, and Kawabata Y
- Subjects
- Humans, Male, Universities, Female, Young Adult, Cohort Studies, Adolescent, Adult, Guam, Pacific Islands, Students psychology, Students statistics & numerical data, Anxiety epidemiology, Depression epidemiology, Depression psychology, Stress, Psychological
- Abstract
The Depression, Anxiety, and Stress Scale-21 (DASS-21) has been used in various countries to assess the mental states of individuals. The objectives of this study were to validate the DASS-21 for use in Guam, an island that endures a high burden of mental health challenges, such as suicide, and examine the predictive impact of selected health indicators on DASS-21 variables. Three years of data (2017-2019) were pooled from the Pacific Islands Cohort of College Students (PICCS) study conducted annually at the University of Guam. In total, 726 students were included in the secondary data analysis. MPlus statistical software was used to perform a confirmatory factor analysis (CFA) for the validation and structural equation modeling (SEM) for the predictive modeling. The results from the CFA suggested an acceptable model fit (RMSEA: 0.073, CFI: 0.901, TLI: 0.889, RMR: 0.044), while SEM suggested that sleep quality and physical activity were significant predictors of DASS-21 variables. Therefore, the DASS-21 is a valid instrument for measuring depression, anxiety, and stress among emerging adults in Guam., Competing Interests: The authors declare no conflicts of interest.
- Published
- 2024
- Full Text
- View/download PDF
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