1. Toward automated classification of pathological transcranial Doppler waveform morphology via spectral clustering.
- Author
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Thorpe SG, Thibeault CM, Canac N, Jalaleddini K, Dorn A, Wilk SJ, Devlin T, Scalzo F, and Hamilton RB
- Subjects
- Automation, Brain Ischemia diagnosis, Brain Ischemia physiopathology, Female, Humans, Machine Learning, Male, Middle Aged, Middle Cerebral Artery, Stroke diagnosis, Stroke physiopathology, Cerebrovascular Circulation physiology, Cluster Analysis, Ultrasonography, Doppler, Transcranial classification
- Abstract
Cerebral Blood Flow Velocity waveforms acquired via Transcranial Doppler (TCD) can provide evidence for cerebrovascular occlusion and stenosis. Thrombolysis in Brain Ischemia (TIBI) flow grades are widely used for this purpose, but require subjective assessment by expert evaluators to be reliable. In this work we seek to determine whether TCD morphology can be objectively assessed using an unsupervised machine learning approach to waveform categorization. TCD beat waveforms were recorded at multiple depths from the Middle Cerebral Arteries of 106 subjects; 33 with Large Vessel Occlusion (LVO). From each waveform, three morphological features were extracted, quantifying onset of maximal velocity, systolic canopy length, and the number/prominence of peaks/troughs. Spectral clustering identified groups implicit in the resultant three-dimensional feature space, with gap statistic criteria establishing the optimal cluster number. We found that gap statistic disparity was maximized at four clusters, referred to as flow types I, II, III, and IV. Types I and II were primarily composed of control subject waveforms, whereas types III and IV derived mainly from LVO patients. Cluster morphologies for types I and IV aligned clearly with Normal and Blunted TIBI flows, respectively. Types II and III represented commonly observed flow-types not delineated by TIBI, which nonetheless deviate from normal and blunted flows. We conclude that important morphological variability exists beyond that currently quantified by TIBI in populations experiencing or at-risk for acute ischemic stroke, and posit that the observed flow-types provide the foundation for objective methods of real-time automated flow type classification., Competing Interests: At the time this research was conducted, authors ST, CT, KJ, AD, NC, SW, and RH were salaried employees of Neural Analytics, Inc., and TD was a paid consultant. FS is also a former paid consultant. All authors either hold stock or stock options in the company. The funding institution, Neural Analytics, Inc., holds numerous patents related to transcranial doppler technology from which the authors do not directly stand to benefit. Our commercial affiliation does not alter our adherence to PLOS ONE policies on sharing data and materials. This research was also supported in part by NINDS-1R43NS105340.
- Published
- 2020
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