5,748 results on '"Tyler W"'
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2. Molecular hydrogen: a sustainable strategy for agricultural and food production challenges
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Duried Alwazeer, John T. Hancock, Grace Russell, Alexandros Ch. Stratakos, Longna Li, Ayhan Çiğdem, Tunahan Engin, and Tyler W. LeBaron
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crops ,foods ,food security ,green strategy ,hydrogen-rich water ,molecular hydrogen ,Food processing and manufacture ,TP368-456 - Abstract
The world is confronting numerous challenges, including global warming, health epidemics, and population growth, each presenting significant threats to the stability and sustainability of our planet’s ecosystems. Such issues have collectively contributed to a reduction in agricultural productivity, corresponding with an increase in demand and costs of essential commodities. This critical situation requires more sustainable environmental, social, and technological solutions. Molecular hydrogen (H2) has been suggested as a “green” solution for our energy needs and many health, agricultural, and food applications. H2 supplementation in agriculture may represent a novel and low-carbon biotechnological strategy applicable to the abundant production of crops, vegetables, and fruits in agri-food chains. H2 is a potential green alternative to conventional chemical fertilizers. The use of a hydrogen-rich water irrigation system may also provide other health-related advantages, i.e., decreasing the heavy metal accumulation in crops. By adopting a H2 strategy, crop producers, food processors, and decision-makers can contribute to sustainable solutions in the face of global challenges such as climate change, communicable disease epidemics, and a growing population. The versatile applications of H₂ in agriculture and the wider food industry position it as a uniquely suitable approach to address today’s significant challenges, potentially fostering better crop production and positively impacting the agri-food chain. The present review is timely in combining the latest knowledge about the potential applications of H2 in the agriculture and food industry, from farm to fork.
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- 2024
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3. The effect of hydrogen-rich water consumption on premenstrual symptoms and quality of life: a randomized controlled trial
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Menekşe Nazlı Aker, İlknur M. Gönenç, Dilan Çalişici, Menekşe Bulut, Duried Alwazeer, and Tyler W. LeBaron
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Premenstrual syndrome ,Quality of life ,Molecular hydrogen ,Hydrogen-rich water ,Questionnaires ,Gynecology and obstetrics ,RG1-991 ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Premenstrual syndrome (PMS) consists of psychiatric or somatic symptoms negatively affecting the daily life. PMS treatment can involve the use of complementary-alternative approaches. Hydrogen-rich water (HRW) has antioxidant and anti-inflammatory properties that may treat PMS. This study aimed to investigate the effect of drinking HRW on the severity of premenstrual symptoms and the quality of life of women who suffer from PMS. Methods This study is a randomized controlled trial. Participants were randomized into two groups (intervention group=33, control group=32) using the block randomization method. Participants were requested to consume 1500-2000 mL of HRW daily in the intervention group and drink water in the placebo group. Participants began drinking either HRW or placebo water from day 16 of their menstrual cycle until day 2 of the following cycle for three menstrual cycles. The research data were collected using a Demographic Information Form, Premenstrual Syndrome Scale (PMSS), and Short form of the World Health Organization Quality of Life Questionnaire (WHOQOL- BREF). Results The intervention group had significantly lower mean scores than the control group in both the first and second follow-ups on the PMSS (P0.05). Conclusions The consumption of HRW reduces the severity of premenstrual symptoms and improves individuals' quality of life in physical and psychological domains.
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- 2024
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4. The impact of six-week dihydrogen-pyrroloquinoline quinone supplementation on mitochondrial biomarkers, brain metabolism, and cognition in elderly individuals with mild cognitive impairment: a randomized controlled trial
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Sonja Baltic, David Nedeljkovic, Nikola Todorovic, Marijana Ranisavljev, Darinka Korovljev, Jelena Cvejic, Jelena Ostojic, Tyler W. LeBaron, Judi Timmcke, Valdemar Stajer, and Sergej M. Ostojic
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Dihydrogen ,Pyrroloquinoline quinone ,Brain metabolism ,Cognition ,Cerebral oxygenation ,Internal medicine ,RC31-1245 - Abstract
Objectives: To assess the impact of medium-term supplementation with dihydrogen and pyrroloquinoline quinone (PQQ) on mitochondrial biomarkers, brain metabolism, and cognition in elderly individuals diagnosed with mild cognitive impairment. Design: A parallel-group, randomized, placebo-controlled, double-blind experimental design, maintaining a 1:1 allocation ratio between the experimental group (receiving the dihydrogen-producing minerals and PQQ) and the control group (receiving the placebo) throughout the trial. Setting and participants: Thirty-four elderly individuals with mild cognitive impairment (mean age 71.9 ± 3.8 years; 28 females) voluntarily provided written consent to participate in this trial. Participants were assigned in a double-blind parallel-group design to receive either a dihydrogen-PQQ mixture (Alpha Hope®, CalerieLife, Irvine, CA) or placebo twice daily for a 6-week intervention period. Methods: The primary endpoint was the change in serum brain-derived neurotrophic factor (BDNF) from baseline to the 6-week follow-up; secondary outcomes included cognitive function indices, specific metabolites in brain tissue, brain oxygenation, and the prevalence and severity of side effects. Interaction effects (time vs. intervention) were evaluated using two-way ANOVA with repeated measures and Friedman’s 2-way ANOVA by ranks, for normally distributed data with homogeneous variances and non-homogeneous variances, respectively. Results: Dihydrogen-PQQ resulted in a significant elevation in serum BDNF levels at the six-week follow-up (P = 0.01); conversely, no changes in BDNF levels were observed in the placebo group throughout the study duration (P = 0.27). A non-significant trend in the impact of interventions on BDNF levels was observed (treatment vs. time interaction, P = 0.14), suggesting a tendency for dihydrogen-PQQ to upregulate BDNF levels compared to the placebo. A significant interaction effect was observed for the Alzheimer's Disease Assessment Scale-Cognitive subscale (ADAS-Cog) scores in the orientation domain (P = 0.03), indicating the superiority of dihydrogen-PQQ over placebo in enhancing this cognitive aspect. Cerebral oxygenation saturation exhibited a significant increase following the administration of the dihydrogen-PQQ mixture, from 48.4 ± 7.2% at baseline to 52.8 ± 6.6% at 6-week post-administration (P = 0.005). In addition, brain N-acetyl aspartate levels significantly increased at seven out of thirteen locations post-intervention in participants receiving the mixture (P ≤ 0.05). Conclusions: Despite the limited number of participants included in the study for interpreting clinical parameters, the dihydrogen-PQQ mixture blend shows promise as a potential dietary intervention for enhancing mental orientation and brain metabolism in individuals with age-related mild cognitive decline.
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- 2024
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5. A Potential Vorticity Diagnosis of Tropical Cyclone Track Forecast Errors
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Tyler W. Barbero, Michael M. Bell, Jan‐Huey Chen, and Philip J. Klotzbach
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tropical cyclones ,track forecast error ,piecewise potential vorticity inversion ,Physical geography ,GB3-5030 ,Oceanography ,GC1-1581 - Abstract
Abstract Tropical cyclone (TC) track forecasting provides essential guidance for coastal communities. However, track forecast errors still occur, highlighting the need for continued research into error sources. Piecewise potential vorticity (PV) inversion is used systematically to quantitatively diagnose errors in track forecasts in four models during the 2017 Atlantic hurricane season. The deep layer mean steering flow (DLMSF) provides a sufficient proxy for hurricane movement, and DLMSF errors are correlated with TC track errors. Analysis of track forecasts for Hurricanes Harvey, Irma, and Maria reveals that their track errors are attributed to steering errors caused by misrepresentations of specific pressure systems. Harvey's westward track error in the GFS resulted from zonal wind errors from the Continental High, while Irma's northward track error in the SHiELD gfsIC resulted from meridional wind errors in the Bermuda High and Continental High. Maria's southward track error in the IFS resulted from meridional wind errors in the Bermuda High and a misrepresentation of Jose to Maria's northwest. The mean absolute error of the DLMSF shows that the Bermuda High contributed the most to steering flow errors in the cases examined. Our results show that piecewise PV inversion can identify the sources of biases in TC track forecasts. The correction of these biases may lead to improved track forecasts. Quantitative diagnostics presented here provide useful information for future model development.
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- 2024
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6. Multiple stressors mediate the effects of warming on leaf decomposition in a large regulated river
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Eric A. Scholl, Kyle R. Hanus, Tyler W. Gardner, and Theodore A. Kennedy
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beetle ,Colorado River ,decomposition ,detritus ,Glen Canyon Dam ,invasive species ,Ecology ,QH540-549.5 - Abstract
Abstract Predicting how increasing temperatures interact with other global change drivers to influence the structure and dynamics of Earth's ecosystems is a primary challenge in ecology. Our study made use of multiple simultaneous “natural experiments” to examine how rapid warming, declining nutrients, invasive consumers, and riparian invasive species management interact to influence leaf decomposition in a large and regulated river. Specifically, we compared the breakdown of cottonwood (Populus fremontii), willow (Salix exigua), and saltcedar (Tamarix sp.) leaf litter in 2022 to a previous experiment from 1998 that occurred under much cooler water temperatures, and had higher water phosphorus concentrations, low numbers of invasive New Zealand mudsnails (Potamopyrgus antipodarum), and unaltered litter chemistry from the herbivory of saltcedar leaf beetles (Diorhabda carinulata). We found that the effects of up to 10°C warmer temperatures on leaf decomposition were mediated by the establishment and management of invasive species and declining water nutrient concentrations arising from upstream reservoir lowering. Such interactions led to accelerated breakdown of saltcedar, but relatively minor effects of warming on the rate of cottonwood and willow decomposition. Additionally, our results demonstrate the potential for favorable invasive species management outcomes in the terrestrial environment to produce unintended responses in adjacent freshwater ecosystems. As temperatures continue to rise, it is critical that future studies consider how warming interacts with multiple stressors and environmental factors to influence processes such as decomposition in freshwater ecosystems.
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- 2024
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7. Comparative Study of the Long-Term Impact of the COVID-19 Pandemic on Mental Health and Nutritional Practices Among International Elite and Sub-Elite Athletes: A Sample of 1420 Participants from 14 Countries
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Morteza Taheri, Helmi Ben Saad, Jad Adrian Washif, Luis Felipe Reynoso-Sánchez, Masoud Mirmoezzi, Leila Youzbashi, Khaled Trabelsi, Mozhgan Moshtagh, Hussein Muñoz-Helú, Leonardo Jose Mataruna-Dos-Santos, Ali Seghatoleslami, Farnaz Torabi, Yusuf Soylu, Cem Kurt, Rodrigo Luiz Vancini, Shabnam Delkash, Marjan Sadat Rezaei, Mahdi Ashouri, Shazia Tahira, Mansour Sayyah, Hamdi Chtourou, Ismail Dergaa, Jana Strahler, Andressa Fontes Guimarães-Mataruna, Tyler W. Lebaron, Ebrahim Shaabani Ezdini, Ardeshir Alizade, Hassane Zouhal, Alexander T. Tarnava, Cain Clark, Nooshin Bigdeli, Achraf Ammar, Özgür Eken, Karim Ben Ayed, Nicola Luigi Bragazzi, Hadi Nobari, Mabliny Thuany, Katja Weiss, Beat Knechtle, and Khadijeh Irandoust
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Performance ,Athlete ,Nutrition ,Infectious disease ,Health ,Sports medicine ,RC1200-1245 - Abstract
Abstract Background Although several studies have shown that the Coronavirus Disease 2019 (COVID-19) lockdown has had negative impacts on mental health and eating behaviors among the general population and athletes, few studies have examined the long-term effects on elite and sub-elite athletes. The present study aimed to investigate the long-term impact of COVID-19 lockdown on mental health and eating behaviors in elite versus sub-elite athletes two years into the pandemic. A cross-sectional comparative study was conducted between March and April 2022, involving athletes from 14 countries, using a convenient non-probabilistic and snowball sampling method. A total of 1420 athletes (24.5 ± 7.9 years old, 569 elites, 35% women, and 851 sub-elites, 45% women) completed an online survey-based questionnaire. The questionnaire included a sociodemographic survey, information about the COVID-19 pandemic, the Depression, Anxiety and Stress Scale—21 Items (DASS-21) for mental health assessment, and the Rapid Eating Assessment for Participants (REAP-S) for assessing eating behavior. Results The results showed that compared to sub-elite athletes, elite athletes had lower scores on the DASS-21 (p = .001) and its subscales of depression (p = .003), anxiety (p = .007), and stress (p
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- 2023
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8. Monte Carlo based dosimetry of extraoral photobiomodulation for prevention of oral mucositis
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Anna N. Yaroslavsky, Tyler W. Iorizzo, Amy F. Juliano, Ather Adnan, James D. Carroll, Stephen T. Sonis, Christine N. Duncan, Wendy B. London, and Nathaniel S. Treister
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Medicine ,Science - Abstract
Abstract Photobiomodulation therapy (PBMT) is recommended for prevention and treatment of oral mucositis, a painful condition that occurs in cancer patients. Intraoral PBMT is limited to treating distal oral mucosa and oropharynx. Extraoral PBMT may provide a more efficient intervention. The goal of this study was to develop a clinically viable protocol for extraoral PBMT. Monte Carlo modeling was used to predict the distribution of 850 nm light for four treatment sites, using anatomical data obtained from MRI and optical properties from the literature. Simulated incident light power density was limited to 399 mW/cm2 to ensure treatment safety and to prevent tissue temperature increase. The results reveal that total tissue thickness determines fluence rate at the oral mucosa, whereas the thickness of individual tissue layers and melanin content are of minor importance. Due to anatomical differences, the fluence rate varied greatly among patients. Despite these variations, a universal protocol was established using a median treatment time methodology. The determined median treatment times required to deliver efficacious dose between 1 and 6 J/cm2 were within 15 min. The developed PBMT protocol can be further refined using the combination of pretreatment imaging and the Monte Carlo simulation approach implemented in this study.
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- 2023
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9. Establishing the link between microbial communities in bovine liver abscesses and the gastrointestinal tract
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Lee J. Pinnell, J. Daniel Young, Tyler W. Thompson, Cory A. Wolfe, Tony C. Bryant, Mahesh N. Nair, John T. Richeson, and Paul S. Morley
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Liver abscesses ,Gut health ,Microbiome ,Gut-liver axis ,Veterinary medicine ,SF600-1100 ,Microbiology ,QR1-502 - Abstract
Abstract Background Liver abscesses (LAs) are one of the most common and important problems faced by the beef industry. The most efficacious method for the prevention of LAs in North America is through dietary inclusion of low doses of antimicrobial drugs such as tylosin, but the mechanisms by which this treatment prevents LAs are not fully understood. LAs are believed to result from mucosal barrier dysfunction in the gastrointestinal tract (GIT) allowing bacterial translocation to the liver via the portal vein, yet differences in the GIT microbiome of cattle with and without LAs have not been explored. Here, we characterized microbial communities from LAs, rumen, ileum, and colon from the same cattle for the first time. Results Results demonstrate that tylosin supplementation was associated with differences in microbial community structure in the rumen and small intestine, largely because of differences in the predominance of Clostridia. Importantly, we show for the first time that microbial communities from multiple LAs in one animal’s liver are highly similar, suggesting that abscesses found at different locations in the liver may originate from a localized source in the GIT (rather than disparate locations). A large portion of abscesses were dominated by microbial taxa that were most abundant in the hindgut. Further, we identified taxa throughout the GIT that were differentially abundant between animals with and without liver abscesses. Bifidobacterium spp.—a bacteria commonly associated with a healthy GIT in several species—were more abundant in the rumen and ileum of animals without LAs compared to those with LAs. Conclusions Together these results provide the first direct comparison of GIT and LA microbial communities within the same animal, add considerable evidence to the hypothesis that some LA microbial communities arise from the hindgut, and suggest that barrier dysfunction throughout the GIT may be the underlying cause of LA formation in cattle.
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- 2023
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10. The role of specific isoforms of CaV2 and the common C-terminal of CaV2 in calcium channel function in sensory neurons of Aplysia
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Tyler W. Dunn, Xiaotang Fan, Jiwon Lee, Petranea Smith, Rushali Gandhi, and Wayne S. Sossin
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Medicine ,Science - Abstract
Abstract The presynaptic release apparatus can be specialized to enable specific synaptic functions. Habituation is the diminishing of a physiological response to a frequently repeated stimulus and in Aplysia, habituation to touch is mediated by a decrease in transmitter release from the sensory neurons that respond to touch even after modest rates of action potential firing. This synaptic depression is not common among Aplysia synaptic connections suggesting the presence of a release apparatus specialized for this depression. We found that specific splice forms of ApCaV2, the calcium channel required for transmitter release, are preferentially used in sensory neurons, consistent with a specialized release apparatus. However, we were not able to find a specific ApCaV2 splice uniquely required for synaptic depression. The C-terminus of ApCaV2 alpha1 subunit retains conserved binding to Aplysia rab-3 interacting molecule (ApRIM) and ApRIM-binding protein (ApRBP) and the C-terminus is required for full synaptic expression of ApCaV2. We also identified a splice form of ApRIM that did not interact with the ApCav2 alpha 1 subunit, but it was not preferentially used in sensory neurons.
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- 2023
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11. Surveillance of Vermont wildlife in 2021–2022 reveals no detected SARS-CoV-2 viral RNA
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Hannah W. Despres, Margaret G. Mills, Madaline M. Schmidt, Jolene Gov, Yael Perez, Mars Jindrich, Allison M. L. Crawford, Warren T. Kohl, Elias Rosenblatt, Hannah C. Kubinski, Benjamin C. Simmons, Miles C. Nippes, Anne J. Goldenberg, Kristina E. Murtha, Samantha Nicoloro, Mia J. Harris, Avery C. Feeley, Taylor K. Gelinas, Maeve K. Cronin, Robert S. Frederick, Matthew Thomas, Meaghan E. Johnson, James Murphy, Elle B. Lenzini, Peter A. Carr, Danielle H. Berger, Soham P. Mehta, Christopher J. Floreani, Amelia C. Koval, Aleah L. Young, Jess H. Fish, Jack Wallace, Ella Chaney, Grace Ushay, Rebecca S. Ross, Erin M. Vostal, Maya C. Thisner, Kyliegh E. Gonet, Owen C. Deane, Kari R. Pelletiere, Vegas C. Rockafeller, Madeline Waterman, Tyler W. Barry, Catriona C. Goering, Sarah D. Shipman, Allie C. Shiers, Claire E. Reilly, Alanna M. Duff, Sarah L. Madruga, David J. Shirley, Keith R. Jerome, Ailyn C. Pérez-Osorio, Alexander L. Greninger, Nick Fortin, Brittany A. Mosher, and Emily A. Bruce
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Medicine ,Science - Abstract
Abstract Previous studies have documented natural infections of SARS-CoV-2 in various domestic and wild animals. More recently, studies have been published noting the susceptibility of members of the Cervidae family, and infections in both wild and captive cervid populations. In this study, we investigated the presence of SARS-CoV-2 in mammalian wildlife within the state of Vermont. 739 nasal or throat samples were collected from wildlife throughout the state during the 2021 and 2022 harvest season. Data was collected from red and gray foxes (Vulpes vulples and Urocyon cineroargentus, respectively), fishers (Martes pennati), river otters (Lutra canadensis), coyotes (Canis lantrans), bobcats (Lynx rufus rufus), black bears (Ursus americanus), and white-tailed deer (Odocoileus virginianus). Samples were tested for the presence of SARS-CoV-2 via quantitative RT-qPCR using the CDC N1/N2 primer set and/or the WHO-E gene primer set. Surprisingly, we initially detected a number of N1 and/or N2 positive samples with high cycle threshold values, though after conducting environmental swabbing of the laboratory and verifying with a second independent primer set (WHO-E) and PCR without reverse transcriptase, we showed that these were false positives due to plasmid contamination from a construct expressing the N gene in the general laboratory environment. Our final results indicate that no sampled wildlife were positive for SARS-CoV-2 RNA, and highlight the importance of physically separate locations for the processing of samples for surveillance and experiments that require the use of plasmid DNA containing the target RNA sequence. These negative findings are surprising, given that most published North America studies have found SARS-CoV-2 within their deer populations. The absence of SARS-CoV-2 RNA in populations sampled here may provide insights in to the various environmental and anthropogenic factors that reduce spillover and spread in North American’s wildlife populations.
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- 2023
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12. Comparison of the In Vitro Iron Bioavailability of Tempeh Made with Tenebrio molitor to Beef and Plant-Based Meat Alternatives
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John W. Wilson, Tyler W. Thompson, Yuren Wei, Jacqueline M. Chaparro, Valerie J. Stull, Mahesh N. Nair, and Tiffany L. Weir
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edible insects ,ferritin ,inductively coupled plasma-mass spectrometry ,iron bioavailability ,plant-based meat alternative ,mealworm ,Nutrition. Foods and food supply ,TX341-641 - Abstract
Iron is an essential mineral that supports biological functions like growth, oxygen transport, cellular function, and hormone synthesis. Insufficient dietary iron can lead to anemia and cause fatigue, cognitive impairment, and poor immune function. Animal-based foods provide heme iron, which is more bioavailable to humans, while plant-based foods typically contain less bioavailable non-heme iron. Edible insects vary in their iron content and may have heme or non-heme forms, depending on their diet. Edible insects have been proposed as a protein source that could address issues of food insecurity and malnutrition in low resource contexts; therefore, it is important to understand the bioavailability of iron from insect-based foods. In this study, we used Inductively Coupled Plasma and Mass Spectrometry (IPC-MS) and Caco-2 cell culture models to compare the soluble and bioavailable iron among five different lab-produced tempeh formulations featuring Tenebrio molitor (mealworm) with their non-fermented raw ingredient combinations. Finally, we compared the iron bioavailability of a mealworm tempeh with two sources of conventional beef (ground beef and sirloin steaks) and two commercially available plant-based meat alternatives. The results show that while plant-based meat alternatives had higher amounts of soluble iron, particularly in the Beyond Burger samples, the fermented mealworm-based tempeh had greater amounts of bioavailable iron than the other samples within the set. While all the samples presented varying degrees of iron bioavailability, all products within the sample set would be considered good sources of dietary iron.
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- 2024
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13. The metatranscriptome of resident microbiota in the gut of blue mussels, Mytilus edulis, under standard laboratory conditions
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Tyler W. Griffin, Lisa M. Nigro, Hannah I. Collins, Bridget A. Holohan, and J. Evan Ward
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Mussel ,Metatranscriptome ,Symbiosis ,Microbiome ,Biotechnology ,TP248.13-248.65 - Abstract
Metatranscriptomic methods involving RNA sequencing (RNA-seq) are powerful tools for evaluating the gene expression profiles of transcriptionally-active microbes that inhabit the tissues of animals. Bivalve molluscs, like all invertebrates, are holobionts and sites of interactions between host animals and both prokaryotic and eukaryotic symbionts. The present communication describes the metatranscriptomic profile of the resident microorganisms that inhabit the gut of blue mussels, Mytilus edulis, under standard laboratory conditions. Each of the eight mussels described herein were housed in isolated microcosms with routine husbandry for 14 days before their gut tissues were sampled and subjected to RNA-seq. Subsequent mRNA reads that aligned to the mussel genome were removed, and the non-host reads were annotated for function and pathway analyses. Under laboratory conditions, the resident gut microbiota expressed genes associated mostly with aerobic energy processes, with other notable contributions from metabolism and protein processing genes. At the pathway level, the most abundant complete pathways expressed in the resident gut microbial communities were related to aerobic cellular respiration, nucleotide biosynthesis, and catabolism. These data represent novel, baseline microbial gene expression information from the gut of mussels, which are crucial for future research examining the mussel holobiont and bivalve microbial ecology. Public retrieval and secondary analyses of these metatranscriptomic profiles are highly encouraged.
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- 2024
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14. Using peer-ethnography to explore the health and well-being of college students affected by COVID-19
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Michelle Teti, Tyler W. Myroniuk, Grace Kirksey, Mariah Pratt, and Enid Schatz
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adolescent health ,college students ,covid-19 ,interventions ,peer ethnography ,prevention ,qualitative methods ,Medicine (General) ,R5-920 - Abstract
Purpose COVID-19 continues to infect and affect college-aged youth. We lack information about how students experienced the pandemic day-to-day and what they need for recovery, from their own perspectives. This study employed peer ethnography to explore student’s insights for current and future prevention and care. Methods A team of eight students were trained as peer ethnographers to observe and record conversations with their peers in 15-minute increments during the COVID-19 pandemic. Transcripts of 200 conversations were collated and analysed via theme analysis to identify patterns. Results Student conversations revealed dichotomous perspectives about COVID-19. Some students prioritized safety, captured via three themes—caution, rethinking routines, and protecting others. Other students struggled to follow prevention guidelines and took risks, also captured by three themes—parties, denial, and misinformation. A third category of themes captured the results of this dichotomy—tense campus relationships and a health leadership vacuum. Conclusions Our findings identify specific locations for intervention (e.g., off campus parties) and needed community collaborations (e.g., bars and universities) for COVID-19 and future pandemics. Our findings suggest that overarching approaches, like harm reduction or affirmation (versus shame), are helpful intervention frameworks. Findings also celebrate the value of peer-ethnography, to learn about pandemics and solutions from the ground up.
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- 2023
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15. The On/Off History of Hydrogen in Medicine: Will the Interest Persist This Time Around?
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Tyler W. LeBaron, Kinji Ohno, and John T. Hancock
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antioxidants ,COVID-19 ,diving ,hydrogen-rich water ,hydroxyl radicals ,molecular hydrogen ,Analytical chemistry ,QD71-142 ,Inorganic chemistry ,QD146-197 - Abstract
Over 2000 publications including more than 100 human studies seem to indicate that humans have only recently benefited from or known about the medical effects of H2 within the past 15 years. However, we have unknowingly benefited from H2 since the dawn of time, from H2-producing bacteria to the use of naturally occurring hydrogen-rich waters. Moreover, the first writings on the therapeutic effects of H2 date to around 1793. Since then, papers appeared sporadically in the literature every few decades but never exploded until Ohsawa et al. again demonstrated hydrogen’s therapeutic effects in 2007. This landmark paper appears to have been the spark that ignited the medical interest in hydrogen. Although H2 was used in the 1880s to locate intestinal perforations, in the 1940s in deep sea diving, and in the 1960s to measure blood flow, H2 was largely viewed as biologically inert. This review highlights the history of hydrogen in the genesis/evolution of life and its medicinal and non-medicinal use in humans. Although hydrogen medicine has a long and erratic history, perhaps future history will show that, this time around, these 15 years of ignited interest resulted in a self-sustaining explosion of its unique medical effects.
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- 2023
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16. Evaluation and guide for embedding opioid use disorder education in health professions’ curricula
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Julie G. Salvador, Sindy L. Bolaños-Sacoman, Joanna G. Katzman, Ann E. Morrison, Lindsay E. Fox, Jennifer S. Schneider, Snehal R. Bhatt, Tyler W. Kincaid, and V. Ann Waldorf
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Buprenorphine training ,Opioid treatment ,Health professional training ,Special aspects of education ,LC8-6691 ,Medicine - Abstract
Abstract Background Morbidity and mortality from Opioid Use Disorder is a health crisis in the United States. During the COVID-19 pandemic, there was a devastating increase of 38.4% in overdose deaths from the 12-month period leading up to June 2019 compared with the 12-month period leading up to May 2020, primarily driven by synthetic opioids. Buprenorphine is an effective medication for opioid use disorder but uptake is slow due in part to lack of provider knowledge, confidence, and negative attitudes/stigma toward patients with OUD. Addressing these barriers in academic training is a promising approach to building workforce able to effectively treat opioid use disorder. Methods Our university developed a training for pre-licensure physicians, physician assistants and psychiatric nurse practitioners that included the DATA Waiver training and a shadowing experience. Expected outcomes included improved knowledge, skills and attitudes about persons with OUD and buprenorphine treatment, plans to provide this treatment post-graduation, for pre-licensure learners to have completed all requirements to prescribe buprenorphine post-graduation, and for the training to be embedded into school’s curricula. Results Results were positive overall including improved knowledge and attitudes toward persons with OUD, better understanding of the benefits of this treatment for patients, increased confidence and motivation to provide this treatment post-graduation. The training is now embedded in each program’s graduation requirements. Conclusion Developing a didactic and experiential training on buprenorphine treatment for opioid use disorder and embedding it into medical, physician assistant, and psychiatric nurse practitioner licensure programs can help prepare future providers to treat opioid use disorder in a range of settings. Key to replicating this program in other university settings is to engage faculty members who actively provide treatment to persons with OUD to ensure shadowing opportunities and serve as role models for learners.
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- 2023
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17. Mesenchymal Stem Cell Priming: Potential Benefits of Administration of Molecular Hydrogen
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Mikhail Yu. Artamonov, Tyler W. LeBaron, Felix A. Pyatakovich, and Inessa A. Minenko
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molecular hydrogen ,mesenchymal stem cells ,stem cell priming ,regenerative medicine ,tissue regeneration ,Medicine ,Pharmacy and materia medica ,RS1-441 - Abstract
Stem cell therapy has emerged as a promising avenue for regenerative medicine, offering the potential to treat a wide range of debilitating diseases and injuries. Among the various types of stem cells, mesenchymal stem cells (MSCs) have garnered significant attention due to their unique properties and therapeutic potential. In recent years, researchers have been exploring novel approaches to enhance the effectiveness of MSC-based therapies. One such approach that has gained traction is the priming of MSCs with molecular hydrogen (H2). This article delves into the fascinating world of mesenchymal stem cell priming with molecular hydrogen and the potential benefits it holds for regenerative medicine.
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- 2024
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18. BayFlux: A Bayesian method to quantify metabolic Fluxes and their uncertainty at the genome scale.
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Tyler W H Backman, Christina Schenk, Tijana Radivojevic, David Ando, Jahnavi Singh, Jeffrey J Czajka, Zak Costello, Jay D Keasling, Yinjie Tang, Elena Akhmatskaya, and Hector Garcia Martin
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Biology (General) ,QH301-705.5 - Abstract
Metabolic fluxes, the number of metabolites traversing each biochemical reaction in a cell per unit time, are crucial for assessing and understanding cell function. 13C Metabolic Flux Analysis (13C MFA) is considered to be the gold standard for measuring metabolic fluxes. 13C MFA typically works by leveraging extracellular exchange fluxes as well as data from 13C labeling experiments to calculate the flux profile which best fit the data for a small, central carbon, metabolic model. However, the nonlinear nature of the 13C MFA fitting procedure means that several flux profiles fit the experimental data within the experimental error, and traditional optimization methods offer only a partial or skewed picture, especially in "non-gaussian" situations where multiple very distinct flux regions fit the data equally well. Here, we present a method for flux space sampling through Bayesian inference (BayFlux), that identifies the full distribution of fluxes compatible with experimental data for a comprehensive genome-scale model. This Bayesian approach allows us to accurately quantify uncertainty in calculated fluxes. We also find that, surprisingly, the genome-scale model of metabolism produces narrower flux distributions (reduced uncertainty) than the small core metabolic models traditionally used in 13C MFA. The different results for some reactions when using genome-scale models vs core metabolic models advise caution in assuming strong inferences from 13C MFA since the results may depend significantly on the completeness of the model used. Based on BayFlux, we developed and evaluated novel methods (P-13C MOMA and P-13C ROOM) to predict the biological results of a gene knockout, that improve on the traditional MOMA and ROOM methods by quantifying prediction uncertainty.
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- 2023
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19. Biosignature preparation for ocean worlds (BioPOW) instrument prototype
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Korine A. Duval, Tessa B. Van Volkenburg, Kathleen L. Craft, Chanel M. Person, John S. Harshman, Diarny O. Fernandes, Jennifer S. Benzing, Emil G. McDowell, Tyler W. Nelson, Gautham S. Divakar, Owen M. Pochettino, Mark E. Perry, and Christopher E. Bradburne
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ocean world ,amino acids ,microfluidics ,design of experiments ,GC-MS ,Astronomy ,QB1-991 ,Geophysics. Cosmic physics ,QC801-809 - Abstract
In situ sampling missions to detect biosignatures on ocean worlds requires thorough sample preparation to manage the expected chemical complexity of such environments. Proposed instruments must be capable of automatic liquid sample handling to ensure sensitive and accurate detections of biosignatures, regardless of the initial chemical composition. Herein, we outline the design, build, and test of the integrated Biosignature Preparation for Ocean Worlds (BioPOW) system capable of purifying amino acids from icy samples. This four step modular instrument 1) melts ice samples, 2) purifies amino acids via cation exchange chromatography, 3) concentrates via vacuum drying, and 4) derivatizes amino acids to volatilize and enable detection with downstream analytical instruments. Initial experiments validated the thermal performance of the system by melting ice in the sample cup (1 mL sample, 3°C–28°C,
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- 2023
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20. Specificity in plant-mycorrhizal fungal relationships: prevalence, parameterization, and prospects
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Tyler W. d’Entremont and Stephanie N. Kivlin
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specialist ,generalist ,mutualism ,selectivity ,mycorrhizas ,Plant culture ,SB1-1110 - Abstract
Species interactions exhibit varying degrees of specialization, ranging from generalist to specialist interactions. For many interactions (e.g., plant-microbiome) we lack standardized metrics of specialization, hindering our ability to apply comparative frameworks of specificity across niche axes and organismal groups. Here, we discuss the concept of plant host specificity of arbuscular mycorrhizal (AM) fungi and ectomycorrhizal (EM) fungi, including the predominant theories for their interactions: Passenger, Driver, and Habitat Hypotheses. We focus on five major areas of interest in advancing the field of plant-mycorrhizal fungal host specificity: phylogenetic specificity, host physiology specificity, functional specificity, habitat specificity, and mycorrhizal fungal-mediated plant rarity. Considering the need to elucidate foundational concepts of specificity in this globally important symbiosis, we propose standardized metrics and comparative studies to enhance our understanding. We also emphasize the importance of analyzing global mycorrhizal data holistically to draw meaningful conclusions and suggest a shift toward single-species analyses to unravel the complexities underlying these associations.
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- 2023
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21. The Early History of Hydrogen and Other Gases in Respiration and Biological Systems: Revisiting Beddoes, Cavallo, and Davy
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John T. Hancock and Tyler W. LeBaron
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Beddoes ,Davy ,Cavallo ,hydrogen gas ,molecular hydrogen ,nitrous oxide ,Analytical chemistry ,QD71-142 ,Inorganic chemistry ,QD146-197 - Abstract
In 2007 a paper in Nature Medicine sparked a new wave of interest in the use of molecular hydrogen (H2) for medical treatments. Since then there has been a flurry of papers looking at a range of medical aspects, from neurodegenerative disease to sports injuries. Several methods of application have been developed, including breathing the gas, or making a hydrogen-rich solution that can be ingested, or administered as saline. H2 treatments are deemed to be safe and can be used in agricultural practice as well as in the biomedical arena. However, the first studies to investigate the use of H2 in medicine were carried out by those interested in the use of a range of gases and how this may affect respiration in humans. Beddoes was published in 1793 and Cavallo in 1798, with Davy following shortly after in 1800. With so many papers now appearing on H2 in biological systems, it seems timely, and interesting, to revisit the early papers, to humbly remind us of what these pioneers of respiratory research did.
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- 2023
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22. Intercomparing atmospheric reanalysis products for hydrodynamic and wave modeling of extreme events during the open-water Arctic season
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Felício Cassalho, Tyler W. Miesse, Arslaan Khalid, André de S. de Lima, Celso M. Ferreira, Martin Henke, and Thomas M. Ravens
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Numerical modeling ,wind and pressure forcing ,Bering Sea ,ADCIRC+SWAN ,ice-free Alaskan coast ,Environmental sciences ,GE1-350 ,Ecology ,QH540-549.5 - Abstract
The significant increase in the Arctic open-water extent along with the earlier sea-ice summer melt and later autumn freeze-up seasons observed in the last decades allow the formation of less fetch-limited waves and the further propagation of storm surges to new ice-free shores. Coupled hydrodynamic and wave models can be used to simulate these complex atmospheric–ocean interactions that often result in coastal flood hazards and extreme waves. However, the reliability of such simulations is intrinsically dependent on the quality of their main inputs, including wind and mean sea-level pressure products, which are usually extracted from reanalysis. This study evaluates the storm surge and significant wave height hindcasts from the coupled ADCIRC+SWAN numerical model forced by seven different reanalysis products during contrasting major storms. Model results show that the highest spatial resolution product CFSv2 led to the overall most accurate model simulations, performing particularly well at locations exposed to extreme surge and waves. Average root mean square error increases of up to 100 percent for storm surge and 157.55 percent for significant wave height were observed when using products other than CFSv2, thus highlighting the importance of selecting the proper wind and pressure reanalysis to be implemented as forcing in the hydrodynamic and wave numerical model.
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- 2022
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23. Berries as a case study for crop wild relative conservation, use, and public engagement in Canada
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Zoë Migicovsky, Beatrice Amyotte, Jens Ulrich, Tyler W. Smith, Nancy J. Turner, Joana Pico, Claudia Ciotir, Mehdi Sharifi, Gennifer Meldrum, Ben Stormes, and Tara Moreau
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berries ,biodiversity ,conservation ,crop diversity ,crop wild relatives ,health benefits ,Environmental sciences ,GE1-350 ,Botany ,QK1-989 - Abstract
Societal impact statement Plant biodiversity is fundamental to the future of food security and agriculture. Berries are the most economically important fruit crops in Canada. Within this article, we explore the nutritional, cultural, and botanical importance of berries, including crop wild relatives (plant species that are closely related to domesticated crops) and plants that are significant to Indigenous Peoples. Using berries as a case study, we explore opportunities for the conservation, use, and public engagement of crop wild relatives. Our objective is to lay the groundwork for future collaborative efforts across these diverse plants. Summary Conservation of plant biodiversity, in particular crop wild relatives including those tended and cultivated by Indigenous Peoples, is critical to food security and agriculture. Building on the 2019 road map for crop wild relatives, we examine berries as a case study for crop wild relative conservation, use, and public engagement. We focus on berries due not only to their economic, cultural, and nutritional importance but also because they are consumed fresh, providing a unique opportunity for individuals and communities to connect with plants. We outline health benefits, geographic distribution, and species at risk for Canadian berries. We describe practices, strategies, and approaches used by Indigenous Peoples to steward berries and emphasize the importance of traditional knowledge. We highlight opportunities for in situ and ex situ berry conservation and use of berries in plant breeding and Indigenous foodways. Our aim is to lay the groundwork for future collaborative efforts in these areas and to showcase berries as a useful case study for conservation of food plant biodiversity and public engagement.
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- 2022
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24. Global biodiversity data suggest allopolyploid plants do not occupy larger ranges or harsher conditions compared with their progenitors
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Julia K. Mata, Sara L. Martin, and Tyler W. Smith
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adaptation ,allo ,climatic range ,genome duplication ,geographic range ,polyploid ,Ecology ,QH540-549.5 - Abstract
Abstract Understanding the factors determining species' geographical and environmental range is a central question in evolution and ecology, and key for developing conservation and management practices. Shortly after the discovery of polyploidy, just over 100 years ago, it was suggested that polyploids generally have greater range sizes and occur in more extreme conditions than their diploid congeners. This suggestion is now widely accepted in the literature and is attributed to polyploids having an increased capacity for genetic diversity that increases their potential for adaptation and invasiveness. However, the data supporting this idea are mixed. Here, we compare the niche of allopolyploid plants to their progenitor species to determine whether allopolyploidization is associated with increased geographic range or extreme environmental tolerance. Our analysis includes 123 allopolyploid species that exist as only one known ploidy level, with at least one known progenitor species, and at least 50 records in the Global Biodiversity Information Facility (GBIF) database. We used GBIF occurrence data and range modeling tools to quantify the geographic and environmental distribution of these allopolyploids relative to their progenitors. We find no indication that allopolyploid plants occupy more extreme conditions or larger geographic ranges than their progenitors. Data evaluated here generally indicate no significant difference in range between allopolyploids and progenitors, and where significant differences do occur, the progenitors are more likely to exist in extreme conditions. We concluded that the evidence from these data indicate allopolyploidization does not result in larger or more extreme ranges. Thus, allopolyploidization does not have a consistent effect on species distribution, and we conclude it is more likely the content of an allopolyploid's genome rather than polyploidy per se that determines the potential for invasiveness.
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- 2023
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25. Incorporation of molecular hydrogen into solvents increases the extraction efficiency of phenolics, flavonoids, anthocyanins, and antioxidants: the case of lemon peels
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Duried Alwazeer, Muhammed Allam Elnasanelkasim, Ayhan Çiğdem, Tunahan Engin, and Tyler W. LeBaron
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phytochemicals ,molecular hydrogen ,temperature ,extraction ,solvents ,lemon peel ,Nutrition. Foods and food supply ,TX341-641 ,Food processing and manufacture ,TP368-456 - Abstract
The impact of hydrogen infusion into solvents on the extraction of phytochemicals was evaluated. Pure (water, ethanol, methanol) and hydrogen-rich solvents at temperatures (25°C and 35°C) were used for extracting phenolics, flavonoids, anthocyanins, and antioxidants from lemon peel. Incorporating hydrogen into all solvents increased the extraction of all phytochemicals. The hydrogen incorporation into solvents led to the highest increase in phenolics and flavonoid contents shown for hydrogen-rich methanol (HRM) followed by hydrogen-rich ethanol (HRE) at both 25°C and 35°C. The highest antioxidant extraction was shown for HRM. The hydrogen incorporation showed the highest phytochemical extraction in methanol and at 35°C. The increase in temperature increased the extraction efficiency, but less efficiently than the hydrogen incorporation. The HPLC phenolic profile confirmed the positive effect of both temperature and hydrogen incorporation on the extraction of flavonoids and non-flavonoids. The improvement of the phytochemical extraction by the proposed method can bring many economic and ecological advantages.
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- 2023
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26. How Midwestern College students protected their families in the first year of COVID-19
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Tyler W. Myroniuk, Michelle Teti, Ifeolu David, and Enid Schatz
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college students ,COVID-19 ,family ,infectious diseases ,public health ,qualitative methods ,Public aspects of medicine ,RA1-1270 - Abstract
IntroductionCollege students routinely visit their families due to geographic proximity and their financial dependence. Consequently, the potential of transmitting COVID-19 from campus to their families’ homes is consequential. Family members are key sources of support for one another in nearly all matters but there is little research uncovering the mechanisms by which families have protected each other in the pandemic.MethodsThrough an exploratory qualitative study, we examined the perspectives of a diverse, randomly sampled, group of students from a Midwestern University (pseudonym), in a college town, to identify COVID-19 prevention practices with their family members. We interviewed 33 students between the end of December 2020 and mid-April 2021 and conducted a thematic analysis through an iterative process.ResultsStudents navigated major differences in opinions and undertook significant actions in attempts to protect their family members from COVID-19 exposure. Students’ actions were rooted in the greater good of public health; prosocial behavior was on display.DiscussionLarger public health initiatives could target the broader population by involving students as messengers.
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- 2023
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27. Effects of home confinement on physical activity, nutrition, and sleep quality during the COVID-19 outbreak in amateur and elite athletes
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Morteza Taheri, Kadijeh Irandoust, Luis Felipe Reynoso-Sánchez, Hussein Muñoz-Helú, Karla Noelia Cruz-Morales, Raymundo Torres-Ramírez, Masoud Mirmoezzi, Leila Youzbashi, Fatemeh Mirakhori, Ismail Dergaa, Rodrigo Luiz Vancini, Leonardo Jose Mataruna-Dos-Santos, Diana Korinna Zazueta-Beltrán, Hassane Zouhal, Roxana Abril Morales-Beltrán, Yusuf Soylu, Amairani Molgado-Sifuentes, Juan González-Hernández, Germán Hernández-Cruz, Luis Bernardo Bojorquez Castro, Cem Kurt, Khaled Trabelsi, Hamdi Chtourou, Ali Seghatoleslami, Manuel Octavio López-Camacho, Ramón Ernesto Mendoza-Baldenebro, Farnaz Torabi, Helmi Ben Saad, Jad Adrian Washif, Jana Strahler, Andressa Fontes Guimarães-Mataruna, Tyler W. Lebaron, Ebrahim Shaabani Ezdini, Marjan Sadat Rezaei, Mozhgan Moshtagh, Fatma Hilal Yagin, Mehmet Gülü, Atefeh Esmaeili, Patrick Müller, Achraf Ammar, Egeria Scoditti, Sergio Garbarino, Luca Puce, Nicola Luigi Bragazzi, and Hadi Nobari
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physical activity ,eating behaviors ,lifestyle behaviors ,sleep quality ,COVID-19 ,Nutrition. Foods and food supply ,TX341-641 - Abstract
IntroductionDespite the progress in the management of the pandemic caused by COVID-19, it is necessary to continue exploring and explaining how this situation affected the athlete population around the world to improve their circumstances and reduce the negative impact of changes in their lifestyle conditions that were necessitated due to the pandemic. The aim of this study was to analyze the moderating influence of physical activity (PA) and dietary habits on the impact of the COVID-19 pandemic experience on sleep quality in elite and amateur athletes.Materials and methodsA total of 1,420 elite (40.1%) and amateur (59.9%) athletes (41% women; 59% men) from 14 different countries participated in a cross-sectional design study. Data were collected using a battery of questionnaires that identified sociodemographic data, sleep quality index, PA levels, dietary habits, and the athletes' perception of their experience during the COVID-19 pandemic. Means and standard deviations were calculated for each variable. The analysis of variances and the correlation between variables were carried out with non-parametric statistics. A simple moderation effect was calculated to analyze the interaction between PA or dietary habits on the perception of the COVID-19 experience effect on sleep quality in elite and amateur athletes.ResultsThe PA level of elite athletes was higher than amateur athletes during COVID-19 (p < 0.001). However, the PA level of both categories of athletes was lower during COVID-19 than pre-COVID-19 (p < 0.01). In addition, amateurs had a higher diet quality than elite athletes during the pandemic (p = 0.014). The perception of the COVID-19 experience as controllable was significantly higher (p = 0.020) among elite athletes. In addition, two moderating effects had significant interactions. For amateur athletes, the PA level moderated the effect of controllable COVID-19 experience on sleep quality [F(3,777) = 3.05; p = 0.028], while for elite athletes, the same effect was moderated by dietary habits [F(3,506) = 4.47, p = 0.004].ConclusionElite athletes had different lifestyle behaviors compared to amateurs during the COVID-19 lockdown. Furthermore, the relevance of maintaining high levels of PA for amateurs and good quality dietary habits by elite athletes was noted by the moderating effect that both variables had on the influence of the controllable experience during the COVID-19 pandemic on sleep quality.
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- 2023
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28. A topological kagome magnet in high entropy form
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Lujin Min, Milos Sretenovic, Thomas W. Heitmann, Tyler W. Valentine, Rui Zu, Venkatraman Gopalan, Christina M. Rost, Xianglin Ke, and Zhiqiang Mao
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Astrophysics ,QB460-466 ,Physics ,QC1-999 - Abstract
Kagome materials have recently attracted significant attention due to their ability to house both topological and magnetic phases. Here, the authors report a high-entropy Kagome magnet that exhibits an anomalous Hall effect, indicating the nontrivial topological properties for the high entropy phase remain.
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- 2022
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29. Hydrogen Inhalation Reduces Lung Inflammation and Blood Pressure in the Experimental Model of Pulmonary Hypertension in Rats
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Tatyana Kuropatkina, Dmitrii Atiakshin, Fedor Sychev, Marina Artemieva, Tatyana Samoilenko, Olga Gerasimova, Viktoriya Shishkina, Khaydar Gufranov, Natalia Medvedeva, Tyler W. LeBaron, and Oleg Medvedev
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molecular hydrogen ,selective antioxidant ,hydrogen inhalations ,ROS ,pulmonary hypertension ,inflammation ,Biology (General) ,QH301-705.5 - Abstract
Hydrogen has been shown to exhibit selective antioxidant properties against hydroxyl radicals, and exerts antioxidant and anti-inflammatory effects. The monocrotaline-induced model of pulmonary hypertension is suitable for studying substances with antioxidant activity because oxidative stress is induced by monocrotaline. On day 1, male Wistar rats were subcutaneously injected with a water–alcohol solution of monocrotaline or a control with an only water–alcohol solution. One group of monocrotaline-injected animals was placed in a plastic box that was constantly ventilated with atmospheric air containing 4% of molecular hydrogen, and the two groups of rats, injected with monocrotaline or vehicle, were placed in boxes ventilated with atmospheric air. After 21 days, hemodynamic parameters were measured under urethane narcosis. The results showed that, although hydrogen inhalation had no effect on the main markers of pulmonary hypertension induced by monocrotaline injection, there was a reduction in systemic blood pressure due to its systolic component, and a decrease in TGF-β expression, as well as a reduction in tryptase-containing mast cells.
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- 2023
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30. Therapeutic Potential of Hydrogen-Rich Water on Muscle Atrophy Caused by Immobilization in a Mouse Model
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Seyedeh Elnaz Nazari, Alex Tarnava, Nima Khalili-Tanha, Mahdieh Darroudi, Ghazaleh Khalili-Tanha, Amir Avan, Majid Khazaei, and Tyler W. LeBaron
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hydrogen-rich water ,muscle atrophy ,immobilization ,oxidative stress ,Medicine ,Pharmacy and materia medica ,RS1-441 - Abstract
Skeletal muscle atrophy is associated with poor quality of life and disability. Thus, finding a new strategy for the prevention and treatment of skeletal muscle atrophy is very crucial. This study aimed to investigate the therapeutic potential of hydrogen-rich water (HRW) on muscle atrophy in a unilateral hind limb immobilization model. Thirty-six male Balb/C mice were divided into control (without immobilization), atrophy, and atrophy + hydrogen-rich water (HRW). Unilateral hind limb immobilization was induced using a splint for 7 days (atrophy) and removed for 10 days (recovery). At the end of each phase, gastrocnemius and soleus muscle weight, limb grip strength, skeletal muscle histopathology, muscle fiber size, cross-section area (CSA), serum troponin I and skeletal muscle IL-6, TNF-α and Malondialdehyde (MDA), and mRNA expression of NF-κB, BAX and Beclin-1 were evaluated. Muscle weight and limb grip strength in the H2-treated group were significantly improved during the atrophy phase, and this improvement continued during the recovery period. Treatment by HRW increased CSA and muscle fiber size and reduced muscle fibrosis, serum troponin I, IL-6, TNF-α and MDA which was more prominent in the atrophy phase. These data suggest that HRW could improve muscle atrophy in an immobilized condition and could be considered a new strategy during rehabilitation.
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- 2023
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31. Can Hydrogen Water Enhance Oxygen Saturation in Patients with Chronic Lung Disease? A Non-Randomized, Observational Pilot Study
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Ram B. Singh, Alex Tarnava, Ghizal Fatima, Jan Fedacko, Viliam Mojto, and Tyler W. LeBaron
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antioxidant ,COVD-19 ,oxidative stress ,inflammation ,hydrogen-rich water ,hypoxia ,Medicine - Abstract
Background: Recently, chronic lung diseases have been found to be associated with marked inflammation and oxidative stress, which leads to fibrosis in the lungs and chronic respiratory failure. This study aims to determine if hydrogen-rich water (HRW) can enhance oxygen saturation among patients with chronic lung diseases. Methods: Ten patients with chronic lung diseases due to COPD (n = 7), bronchial asthma (n = 2), and tuberculosis of the lung (n = 1) with oxygen saturation of 90–95% were provided high-concentration (>5 mM) HRW using H2-producing tablets for 4 weeks. Oxygen saturation was measured via oximeter and blood pressure via digital automatic BP recorder. Results: HRW administration was associated with a significant increase in oxygen saturation (SpO2) and decrease in TBARS, MDA, and diene conjugates, with an increase in vitamin E and nitrite levels, compared to baseline levels. Physical training carried out after HRW therapy appeared to increase exercise tolerance and decrease hypoxia, as well as delay the need for oxygen therapy. Conclusion: Treatment with HRW in patients with hypoxia from chronic lung diseases may decrease oxidative stress and improve oxygen saturation in some patients. HRW therapy may also provide increased exercise tolerance in patients with chronic hypoxia, but further research is needed.
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- 2023
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32. Force oscillations underlying precision grip in humans with lesioned corticospinal tracts
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Charley W. Lafe, Fang Liu, Tyler W. Simpson, Chan Hong Moon, Jennifer L. Collinger, George F. Wittenberg, and Michael A. Urbin
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Precision grip ,Motor control ,Stroke ,Corticospinal tract ,White matter ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Stability of precision grip depends on the ability to regulate forces applied by the digits. Increased frequency composition and temporal irregularity of oscillations in the force signal are associated with enhanced force stability, which is thought to result from increased voluntary drive along the corticospinal tract (CST). There is limited knowledge of how these oscillations in force output are regulated in the context of dexterous hand movements like precision grip, which are often impaired by CST damage due to stroke. The extent of residual CST volume descending from primary motor cortex may help explain the ability to modulate force oscillations at higher frequencies. Here, stroke survivors with longstanding hand impairment (n = 17) and neurologically-intact controls (n = 14) performed a precision grip task requiring dynamic and isometric muscle contractions to scale and stabilize forces exerted on a sensor by the index finger and thumb. Diffusion spectrum imaging was used to quantify total white matter volume within the residual and intact CSTs of stroke survivors (n = 12) and CSTs of controls (n = 14). White matter volumes within the infarct region and an analogous portion of overlap with the CST, mirrored onto the intact side, were also quantified in stroke survivors. We found reduced ability to stabilize force and more restricted frequency ranges in force oscillations of stroke survivors relative to controls; though, more broadband, irregular output was strongly related to force-stabilizing ability in both groups. The frequency composition and temporal irregularity of force oscillations observed in stroke survivors did not correlate with maximal precision grip force, suggesting that it is not directly related to impaired force-generating capacity. The ratio of residual to intact CST volumes contained within infarct and mirrored compartments was associated with more broadband, irregular force oscillations in stroke survivors. Our findings provide insight into granular aspects of dexterity altered by corticospinal damage and supply preliminary evidence to support that the ability to modulate force oscillations at higher frequencies is explained, at least in part, by residual CST volume in stroke survivors.
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- 2023
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33. Post-migration emotional well-being among Black South Africans
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Tyler W. Myroniuk, Michael J. White, and Sangeetha Madhavan
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Depression ,Life satisfaction ,Mental health ,Migration ,South Africa ,Mental healing ,RZ400-408 ,Public aspects of medicine ,RA1-1270 - Abstract
Internal migration has been an institutionalized part of life for Black South Africans from the 1800s, when men left their rural homes to work in mines, through apartheid and into the present. Like other settings in the Global South, we know surprisingly little about the emotional well-being of migrants, especially in sub-Saharan African contexts. We investigate changes in the emotional well-being of 2281 working-age Black South Africans after migration, drawing on four waves of data, from 2008 to 2015, from the nationally representative National Income Dynamics Study. Fixed-effects regressions show that migrants exhibit changes in life satisfaction as well as proclivity towards depression but that these outcomes vary by distance of move and type of move—moving within or between provinces. As South Africa's health policies expand beyond addressing infectious diseases, it is important to consider mental health particularly of those who face the necessity of migration to sustain a livelihood.
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- 2022
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34. Investigation of silk as a phantom material for ultrasound and photoacoustic imaging
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Christopher D. Nguyen, Skye A. Edwards, Tyler W. Iorizzo, Brooke N. Longo, Anna N. Yaroslavsky, David L. Kaplan, and Srivalleesha Mallidi
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Silk ,Phantom material ,Speed of sound ,Acoustic attenuation ,Optical absorption ,Optical scattering ,Physics ,QC1-999 ,Acoustics. Sound ,QC221-246 ,Optics. Light ,QC350-467 - Abstract
Comprehensive characterization of biomedical imaging systems require phantoms that are easy to fabricate and can mimic human tissue. Additionally, with the arrival of engineered tissues, it is key to develop phantoms that can mimic bioengineered samples. In ultrasound and photoacoustic imaging, water-soluble phantom materials such as gelatin undergo rapid degradation while polymer-based materials such as polyvinyl alcohol are not conducive for generating bioengineered tissues that can incorporate cells. Here we propose silk protein-based hydrogels as an ultrasound and photoacoustic phantom material that has potential to provide a 3D environment for long-term sustainable cell growth. Common acoustic, optical, and biomechanical properties such as ultrasound attenuation, reduced scattering coefficient, and Young's modulus were measured. The results indicate that silk acoustically mimics many tissue types while exhibiting similar reduced optical scattering in the wavelength range of 400–1200 nm. Furthermore, silk-based materials can be stored long-term with no change in acoustic and optical properties, and hence can be utilized to assess the performance of ultrasound and photoacoustic systems.
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- 2022
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35. A single chromosome strain of S. cerevisiae exhibits diminished ethanol metabolism and tolerance
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Tyler W. Doughty, Rosemary Yu, Lucy Fang-I Chao, Zhongjun Qin, Verena Siewers, and Jens Nielsen
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Biotechnology ,TP248.13-248.65 ,Genetics ,QH426-470 - Abstract
Abstract Background Eukaryotic organisms, like the model yeast S. cerevisiae, have linear chromosomes that facilitate organization and protection of nuclear DNA. A recent work described a stepwise break/repair method that enabled fusion of the 16 chromosomes of S. cerevisiae into a single large chromosome. Construction of this strain resulted in the removal of 30 of 32 telomeres, over 300 kb of subtelomeric DNA, and 107 subtelomeric ORFs. Despite these changes, characterization of the single chromosome strain uncovered modest phenotypes compared to a reference strain. Results This study further characterized the single chromosome strain and found that it exhibited a longer lag phase, increased doubling time, and lower final biomass concentration compared with a reference strain when grown on YPD. These phenotypes were amplified when ethanol was added to the medium or used as the sole carbon source. RNAseq analysis showed poor induction of genes involved in diauxic shift, ethanol metabolism, and fatty-acid ß-oxidation during growth on ethanol compared to the reference strain. Enzyme-constrained metabolic modeling identified decreased flux through the enzymes that are encoded by these poorly induced genes as a likely cause of diminished biomass accumulation. The diminished growth on ethanol for the single chromosome strain was rescued by nicotinamide, an inhibitor of sirtuin family deacetylases, which have been shown to silence gene expression in heterochromatic regions. Conclusions Our results indicate that sirtuin-mediated silencing in the single chromosome strain interferes with growth on non-fermentable carbon sources. We propose that the removal of subtelomeric DNA that would otherwise be bound by sirtuins leads to silencing at other loci in the single chromosome strain. Further, we hypothesize that the poorly induced genes in the single chromosome strain during ethanol growth could be silenced by sirtuins in wildtype S. cerevisiae during growth on glucose.
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- 2021
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36. An H2-infused, nitric oxide-producing functional beverage as a neuroprotective agent for TBIs and concussions
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Tyler W. LeBaron, Jason Kharman, and Michael L. McCullough
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traumatic brain injury ,molecular hydrogen ,nitric oxide ,inflammation ,reactive oxygen specie ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Traumatic brain injuries (TBIs) are a leading cause of death and disability. Sports-related TBIs are estimated to be more than several million per year. The pathophysiology of TBIs involves high levels of inflammation, oxidative stress, dysregulation of ion homeostasis, mitochondrial dysfunction, and apoptosis. There is also a reduction in cerebral blood flow, leading to hypoxia and reduced removal of metabolic waste, which further exacerbates the injury. There is currently no recognized effective medical treatment or intervention for TBIs, which may in part be due to the difficulty of drug delivery through the blood-brain barrier. Molecular hydrogen has recently emerged as a neuroprotective medical gas against cerebral infarction and neurodegenerative diseases including TBIs. Its small molecular size and nonpolar nature allow it to easily diffuse through the blood-brain barrier, cell membranes and subcellular compartments. Hydrogen has been shown to exert selective anti-inflammatory, antioxidant, and anti-apoptotic effects by regulating various transcription factors and protein phosphorylation cascades. Nitric oxide is another well-recognized medical gas that plays divergent roles in protecting from and in the recovery of TBIs, as well as in contributing to their pathophysiology and injury. Excessive activation of inducible nitric oxide synthase leads to excess inflammation and oxidative/nitrosative damage as well as a paradoxical nitric oxide depletion in the locations it is needed. Hydrogen regulates nitric oxide production and metabolism, which enhances its benefits while reducing its harms. A novel H2-infused, nitric oxide producing beverage, Hydro Shot, may have important neuroprotective benefits for TBIs. We report preliminary indications that Hydro Shot may be a meaningful adjuvant treatment for TBIs.
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- 2021
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37. Addressing the Barriers to Clinical Trials Accrual in Community Cancer Centres Using a National Clinical Trials Navigator:A Cross-Sectional Analysis
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Caroline Hamm MD, Dora Cavallo-Medved PhD, Devinder Moudgil PhD, Lee McGrath, John Huang, Yueyang Li, Tyler W. Stratton, Tyler Robinson, Krista Naccarato, Stephen Sundquist, and Janet Dancey
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Introduction Clinical trials, although academically accepted as the most effective treatment available for cancer patients, poor accrual to clinical trials remains a significant problem. A clinical trials navigator (CTN) program was piloted where patients and/or their healthcare professionals could request a search and provide a list of potential cancer clinical trials in which a patient may be eligible based on their current status and disease. Objectives This study examined the outcomes of a pilot program to try to improve clinical trials accrual with a focus on patients at medium to small sized cancer programs. Outcomes examined included patient disposition (referral to and accrual to interventional trials), patient survival, sites of referral to the CTN program. Methods One 0.5 FTE navigator was retained. Stakeholders referred to the CTN through the Canadian Cancer Clinical Trials Network. Demographic and outcomes data were recorded. Results Between March 2019 and February 2020, 118 patients from across Canada used the program. Seven per cent of patients referred were enrolled onto treatment clinical trials. No available trial excluded 39% patients, and 28% had a decline in their health and died before they could be referred or enrolled onto a clinical trial. The median time from referral to death was 109 days in those that passed. Conclusion This novel navigator pilot has the potential to increase patient accrual to clinical trials. The CTN program services the gap in the clinical trials system, helping patients in medium and small sized cancer centres identify potential clinical trials at larger centres.
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- 2022
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38. Electrical stimulation of the external ear acutely activates noradrenergic mechanisms in humans
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Michael A. Urbin, Charles W. Lafe, Tyler W. Simpson, George F. Wittenberg, Bharath Chandrasekaran, and Douglas J. Weber
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Vagus nerve ,Vagus nerve stimulation ,Pupillometry ,Noradrenaline ,Norepinephrine ,Locus coeruleus ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Background: Transcutaneous stimulation of the external ear is thought to recruit afferents of the auricular vagus nerve, providing a means to activate noradrenergic pathways in the central nervous system. Findings from human studies examining the effects of auricular stimulation on noradrenergic biomarkers have been mixed, possibly relating to the limited and variable parameter space explored to date. Objective: We tested the extent to which brief pulse trains applied to locations of auricular innervation (canal and concha) elicit acute pupillary responses (PRs) compared to a sham location (lobe). Pulse amplitude and frequency were varied systematically to examine effects on PR features. Methods: Participants (n = 19) underwent testing in three separate experiments, each with stimulation applied to a different external ear location. Perceptual threshold (PT) was measured at the beginning of each experiment. Pulse trains (∼600 ms) consisting of different amplitude (0.0xPT, 0.8xPT, 1.0xPT, 1.5xPT, 2.0xPT) and frequency (25 Hz, 300 Hz) combinations were administered during eye tracking procedures. Results: Stimulation to all locations elicited PRs which began approximately halfway through the pulse train and peaked shortly after the final pulse (≤1 s). PR size and incidence increased with pulse amplitude and tended to be greatest with canal stimulation. Higher pulse frequency shortened the latency of PR onset and peak dilation. Changes in pupil diameter elicited by pulse trains were weakly associated with baseline pupil diameter. Conclusion: (s): Auricular stimulation elicits acute PRs, providing a basis to synchronize neuromodulator release with task-related neural spiking which preclinical studies show is a critical determinant of therapeutic effects. Further work is needed to dissociate contributions from vagal and non-vagal afferents mediating activation of the biomarker.
- Published
- 2021
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39. Association of Socioeconomic Status With Relapse After Ponseti Method Treatment of Idiopathic Clubfeet
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Lawrence A. Akinyoola MD, Zachary Gunderson BS, Seungyup Sun BS, Ryan Fitzgerald MD, Christine B. Caltoum MD, Tyler W. Christman DO, MS, Robert Bielski MD, and Randall T. Loder MD
- Subjects
Orthopedic surgery ,RD701-811 - Abstract
Background: The Ponseti method is today’s standard treatment of idiopathic talipes equinovarus (ITEV). Compliance with foot abduction bracing (FABO) and socioeconomic factors have been shown to impact treatment outcome. We wished to further study socioeconomic factors using the Area Deprivation Index (ADI), a more comprehensive way to evaluate socioeconomic status, which has not been done before. Methods: All TEV patients from 2010 through 2019 treated with the Ponseti method were reviewed. Standard demographic variables, as well as the number of casts to complete initial correction, FABO compliance, and occurrence of relapse were tabulated. Socioeconomic level was quantified with the 2018 ADI. Results: There were 168 children; 151 had typical and 17 complex TEV. Average follow-up was 4.3 ± 1.8 years; relapse occurred in 46%. There were no significant differences in the percentage of relapse by sex, race, or ADI. FABO noncompliance was present in 46%. Relapse increased with increasing time of follow-up and FABO noncompliance (76% vs 21%, P < 10 −6 ). Multivariate logistic regression analysis revealed that only FABO compliance and length of follow-up were associated with relapse. The OR of relapse for FABO noncompliance was 17.9 (7.6, 42.4, P < 10 –6 ) and for follow-up >4 years the OR was 4.97 (2.1, 11.70, P = .0003). Conclusion: The outcome of the Ponseti method for TEV treatment is dependent on local circumstances. In our state, socioeconomic status, as determined by the ADI, was not associated with the occurrence of relapse. Thus, each center needs to assess its results, and analyze its own reasons for relapse. There were no other demographic variables associated with relapse except FABO compliance and length of follow-up. Parents should be strongly advised that FABO compliance and follow-up appears paramount to achieving the best results, and that complex TEV are at greater risk for relapse. Level of Evidence: Level IV, case series
- Published
- 2022
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40. What We Talk About When We Talk About Troponin: A Descriptive Study of Troponin Terms
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William R. Lang, Kate E. Cahill, Tyler W. Wark, and Rebekah L. Gardner
- Subjects
Medicine - Abstract
**Objectives:** Elevated serum troponin values, regardless of cause, are associated with increased short-term and long-term mortality. The objective of this study was to describe and quantify use of troponin-related terms in hospital discharge summaries. **Study Design:** Retrospective chart review. **Methods:** We included patients admitted to the medical service of three Rhode Island hospitals in 2018. Patients had to have two or more troponin measurements, including at least one elevated value, as well as a rise-and-fall pattern. We reviewed text from three sections in the discharge summary—the problem list, hospital course, and attending attestation—to identify terms referring to troponin. We double-coded 10% of the sample to assess inter-rater reliability. Troponin terms were grouped by whether they referenced an abnormal level, as well as by the etiology of the elevation. Descriptive statistics were used. **Results:** 257 patients were included; 66% of their discharge summaries had a troponin descriptor. We identified 19 unique troponin terms: three of these terms implied a normal troponin level (e.g., “flat troponin”), seven described an abnormal elevation without specifically referencing myocardial injury as the etiology (e.g., “troponin bump”), and the rest referenced ischemia or infarction (e.g., “NSTEMI”). Over one-third (34%) of the records had no troponin terms in the discharge summary, despite those patients having at least one abnormal troponin level during their hospitalization. **Conclusions:** We found that clinicians used a wide variety of terms to describe troponin elevations in their discharge summaries, including minimizing language and potentially conflicting terms; a third of discharge summaries omitted any mention of the abnormal troponin value. More precise language may facilitate appropriate evaluation and management of these higher risk patients after hospital discharge.
- Published
- 2022
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41. Why Are Preschool Programs Becoming Less Effective? EdWorkingPaper No. 23-885
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Anamarie A. Whitaker, Margaret Burchinal, Jade M. Jenkins, Tyler W. Watts, Greg J. Duncan, Emma R. Hart, and Ellen Peisner-Feinberg
- Abstract
High-quality preschool programs are heralded as effective policy solutions to promote low-income children's development and life-long wellbeing. Yet evaluations of recent preschool programs produce puzzling findings, including negative impacts, and divergent, weaker results than demonstration programs implemented in the 1960s and 70s. We provide potential explanations for why modern preschool programs have become less effective, focusing on changes in instructional practices and counterfactual conditions. We also address popular theories that likely do not explain weakening program effectiveness, such as lower preschool quality and low-quality subsequent environments. The field must take seriously the smaller positive, null, and negative impacts from modern programs and strive to understand why effects differ and how to improve program effectiveness through rigorous, longitudinal research.
- Published
- 2023
42. Activity of immunoproteasome inhibitor ONX-0914 in acute lymphoblastic leukemia expressing MLL–AF4 fusion protein
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Tyler W. Jenkins, Sondra L. Downey-Kopyscinski, Jennifer L. Fields, Gilbert J. Rahme, William C. Colley, Mark A. Israel, Andrey V. Maksimenko, Steven N. Fiering, and Alexei F. Kisselev
- Subjects
Medicine ,Science - Abstract
Abstract Proteasome inhibitors bortezomib and carfilzomib are approved for the treatment of multiple myeloma and mantle cell lymphoma and have demonstrated clinical efficacy for the treatment of acute lymphoblastic leukemia (ALL). The t(4;11)(q21;q23) chromosomal translocation that leads to the expression of MLL–AF4 fusion protein and confers a poor prognosis, is the major cause of infant ALL. This translocation sensitizes tumor cells to proteasome inhibitors, but toxicities of bortezomib and carfilzomib may limit their use in pediatric patients. Many of these toxicities are caused by on-target inhibition of proteasomes in non-lymphoid tissues (e.g., heart muscle, gut, testicles). We found that MLL–AF4 cells express high levels of lymphoid tissue-specific immunoproteasomes and are sensitive to pharmacologically relevant concentrations of specific immunoproteasome inhibitor ONX-0914, even in the presence of stromal cells. Inhibition of multiple active sites of the immunoproteasomes was required to achieve cytotoxicity against ALL. ONX-0914, an inhibitor of LMP7 (ß5i) and LMP2 (ß1i) sites of the immunoproteasome, and LU-102, inhibitor of proteasome ß2 sites, exhibited synergistic cytotoxicity. Treatment with ONX-0914 significantly delayed the growth of orthotopic ALL xenograft tumors in mice. T-cell ALL lines were also sensitive to pharmacologically relevant concentrations of ONX-0914. This study provides a strong rationale for testing clinical stage immunoproteasome inhibitors KZ-616 and M3258 in ALL.
- Published
- 2021
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43. Protective Effect of Hydrogen-Rich Saline on Spinal Cord Damage in Rats
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Murat Kayabaş, Levent Şahin, Mustafa Makav, Duried Alwazeer, Levent Aras, Serdar Yiğit, and Tyler W. LeBaron
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apoptosis ,cytokines ,hydrogen-rich saline ,reactive oxygen species ,spinal cord injury ,Medicine ,Pharmacy and materia medica ,RS1-441 - Abstract
The anti-inflammatory and anti-apoptotic effects of molecular hydrogen, delivered as hydrogen-rich saline (HRS), on spinal cord injury was investigated. Four-month-old male Sprague Dawley rats (n = 24) were classified into four groups: (1) control—laminectomy only at T7-T10; (2) spinal injury—dura left intact, Tator and Rivlin clip compression model applied to the spinal cord for 1 min, no treatment given; (3) HRS group—applied intraperitoneally (i.p.) for seven days; and (4) spinal injury—HRS administered i.p. for seven days after laminectomy at T7–T10 level, leaving the dura intact and applying the Tator and Rivlin clip compression model to the spinal cord for 1 min. Levels of interleukin-6 (IL-6) and tumor necrosis factor-alpha (TNF-α) were measured in blood taken at day seven from all groups, and hematoxylin–eosin (H & E) and terminal deoxynucleotidyl transferase dUTP nick-end labeling (TUNEL) were used to stain the tissue samples. IL-6 and TNF-α levels were significantly lower in the group treated with HRS following the spinal cord injury compared to the group whose spinal cord was damaged. A decrease in apoptosis was also observed. The anti-inflammatory and anti-apoptotic effect of IL-6 may be a clinically useful adjuvant therapy after spinal cord injury.
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- 2023
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44. Molecular Hydrogen: From Molecular Effects to Stem Cells Management and Tissue Regeneration
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Mikhail Yu. Artamonov, Andrew K. Martusevich, Felix A. Pyatakovich, Inessa A. Minenko, Sergei V. Dlin, and Tyler W. LeBaron
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molecular hydrogen ,oxidative stress ,mechanisms ,mesenchymal stem cells ,regeneration ,Therapeutics. Pharmacology ,RM1-950 - Abstract
It is known that molecular hydrogen is a relatively stable, ubiquitous gas that is a minor component of the atmosphere. At the same time, in recent decades molecular hydrogen has been shown to have diverse biological effects. By the end of 2022, more than 2000 articles have been published in the field of hydrogen medicine, many of which are original studies. Despite the existence of several review articles on the biology of molecular hydrogen, many aspects of the research direction remain unsystematic. Therefore, the purpose of this review was to systematize ideas about the nature, characteristics, and mechanisms of the influence of molecular hydrogen on various types of cells, including stem cells. The historical aspects of the discovery of the biological activity of molecular hydrogen are presented. The ways of administering molecular hydrogen into the body are described. The molecular, cellular, tissue, and systemic effects of hydrogen are also reviewed. Specifically, the effect of hydrogen on various types of cells, including stem cells, is addressed. The existing literature indicates that the molecular and cellular effects of hydrogen qualify it to be a potentially effective agent in regenerative medicine.
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- 2023
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45. Inoculating rhizome-propagated Sporobolus pumilus with a native mycorrhizal fungus increases salt marsh plant growth and survival
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Tyler W. d’Entremont, Juan C. López-Gutiérrez, and Allison K. Walker
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mycorrhizal fungi ,rhizophere ,salt marsh restoration ,sediment ,spartina ,sporobolus ,Education ,Science - Abstract
Salt marshes are ecosystems of significant ecological importance for coastal stability and fundamental roles in marine ecosystems. Salt marshes are declining due to anthropogenic and natural causes including sea level rise. Coastal restoration efforts have increased worldwide, but many fail in long-term coastal stability. We used a naturally occurring arbuscular mycorrhizal fungus (AMF) to test whether survival and early growth of the salt marsh grass Sporobolus pumilus (formerly Spartina patens) improved under simulated salt marsh conditions. Using a tidal mesocosm bench, we grew inoculated plants with varying AMF treatments under simulated tidal regimes to determine if AMF could aid in establishment of healthy Sporobolus communities. Rhizome-derived S. pumilus had greater survival and grew faster than seed-derived plants. Plants inoculated with propagated AMF consistently outperformed both sterile and native sediment controls in terms of plant survival and growth. Use of rhizome-derived Sporobolus inoculated with propagated Funneliformis geosporum showed the most promise in producing successful plant populations for salt marsh restoration. This may be due to plant life stage and improved plant nutrient status, allowing rhizome-derived plants to grow more quickly than seed-derived plants. Using these plants in future large-scale restoration may increase re-establishment of salt marsh ecosystems.
- Published
- 2021
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46. Temperature induced changes in the optical properties of skin in vivo
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Tyler W. Iorizzo, Peter R. Jermain, Elena Salomatina, Alona Muzikansky, and Anna N. Yaroslavsky
- Subjects
Medicine ,Science - Abstract
Abstract Knowledge of temperature-induced changes of skin optical properties is required for accurate dosimetry of photothermal treatments. We determined and compared in vivo optical properties of mouse ear skin at different temperatures. The diffuse reflectance, total and diffuse transmittance were measured in the spectral range from 400 to 1650 nm using an integrating sphere spectrometer at the temperatures of 25 °C, 36 °C and 60 °C. Target temperatures were attained and maintained using an automated heater equipped with a sensor for feed-back and control. Temperature and temperature induced morphological changes of skin were monitored using an infrared thermal camera and reflectance confocal microscopy, respectively. An inverse Monte Carlo technique was utilized to determine absorption, scattering, and anisotropy factors from the measured quantities. Our results indicate significant differences between the optical properties of skin at different temperatures. Absorption and scattering coefficients increased, whereas anisotropy factors decreased with increasing temperature. Changes in absorption coefficients indicate deoxygenation of hemoglobin, and a blue shift of water absorption bands. Confocal imaging confirmed that our observations can be explained by temperature induced protein denaturation and blood coagulation. Monitoring spectral responses of treated tissue may become a valuable tool for accurate dosimetry of light treatments.
- Published
- 2021
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47. Shear-Induced Decaying Turbulence in Bose-Einstein Condensates
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Simjanovski, Simeon, Gauthier, Guillaume, Rubinsztein-Dunlop, Halina, Reeves, Matthew T., and Neely, Tyler W.
- Subjects
Condensed Matter - Quantum Gases - Abstract
We study the creation and breakdown of a quantized vortex shear layer forming between a stationary Bose-Einstein condensate and a stirred-in persistent current. Once turbulence is established, we characterize the progressive clustering of the vortices, showing that the cluster number follows a power law decay with time, similar to decaying turbulence in other two-dimensional systems. Numerical study of the system demonstrates good agreement of the experimental data with a point vortex model that includes damping and noise. With increasing vortex number in the computational model, we observe a convergence of the power-law exponent to a fixed value., Comment: 8 pages, 8 figures
- Published
- 2024
48. Managing sedation in the mechanically ventilated emergency department patient: a clinical review
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Clifford L. Freeman, Christopher S. Evans, and Tyler W. Barrett
- Subjects
emergency ,mechanical ventilation ,sedation ,Medical emergencies. Critical care. Intensive care. First aid ,RC86-88.9 - Abstract
Abstract Managing sedation in the ventilated emergency department (ED) patient is increasingly important as critical care unit admissions from EDs increase and hospital crowding results in intubated patients boarding for longer periods. The objectives of this review are 3‐fold; (1) describe the historical perspective of how sedation of the ventilated patient has changed, (2) summarize the most commonly used sedation and analgesic agents, and (3) provide a practical approach to sedation and analgesia in mechanically ventilated ED patients. We searched PubMed using keywords “emergency department post‐intubation sedation,” “emergency department critical care length of stay,” and “sedation in mechanically ventilated patient.” The search results were limited to English language and reviewed for relevance to the subject of interest. Our search resulted in 723 articles that met the criteria for managing sedation in the ventilated ED patient, of which 19 articles were selected and reviewed. Our review of the literature found that the level of sedation and practices of sedation and analgesia in the ED environment have downstream consequences on patient care including overall patient centered outcomes even after the patient has left the ED. It is reasonable to begin with analgesia in isolation, although sedating medications should be used when patients remain uncomfortable and agitated after initial interventions are performed.
- Published
- 2020
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49. Stress-induced expression is enriched for evolutionarily young genes in diverse budding yeasts
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Tyler W. Doughty, Iván Domenzain, Aaron Millan-Oropeza, Noemi Montini, Philip A. de Groot, Rui Pereira, Jens Nielsen, Céline Henry, Jean-Marc G. Daran, Verena Siewers, and John P. Morrissey
- Subjects
Science - Abstract
Fermentation parameters of industrial processes are often not the ideal growth conditions for industrial microbes. Here, the authors reveal that young genes are more responsive to environmental stress than ancient genes using a new gene age assignment method and provide targeted genes for metabolic engineering.
- Published
- 2020
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50. Understanding challenges of using routinely collected health data to address clinical care gaps: a case study in Alberta, Canada
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Denise Campbell-Scherer, Katelynn Crick, Taylor McGuckin, Tyler W Myroniuk, Brock Setchell, and Roseanne O Yeung
- Subjects
Medicine (General) ,R5-920 - Published
- 2022
- Full Text
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