33 results on '"Tsuboi D"'
Search Results
2. Development of laser tsunami-meter
- Author
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Sakata, S., primary, Gubin, M.A., additional, Araya, A., additional, and Tsuboi, D., additional
- Published
- 2003
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3. Signal flow in the NMDA receptor-dependent phosphoproteome regulates postsynaptic plasticity for aversive learning.
- Author
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Funahashi Y, Ahammad RU, Zhang X, Hossen E, Kawatani M, Nakamuta S, Yoshimi A, Wu M, Wang H, Wu M, Li X, Faruk MO, Shohag MH, Lin YH, Tsuboi D, Nishioka T, Kuroda K, Amano M, Noda Y, Yamada K, Sakimura K, Nagai T, Yamashita T, Uchino S, and Kaibuchi K
- Subjects
- Animals, Mice, Phosphorylation, Male, Signal Transduction, rho-Associated Kinases metabolism, rho-Associated Kinases genetics, Mice, Inbred C57BL, Phosphoproteins metabolism, Phosphoproteins genetics, Learning physiology, Avoidance Learning physiology, Rho Guanine Nucleotide Exchange Factors metabolism, Rho Guanine Nucleotide Exchange Factors genetics, Calcium-Calmodulin-Dependent Protein Kinase Type 2 metabolism, Synapses metabolism, rhoA GTP-Binding Protein metabolism, Dendritic Spines metabolism, Receptors, N-Methyl-D-Aspartate metabolism, Neuronal Plasticity physiology, Proteome metabolism, Nerve Tissue Proteins metabolism, Nerve Tissue Proteins genetics
- Abstract
Structural plasticity of dendritic spines in the nucleus accumbens (NAc) is crucial for learning from aversive experiences. Activation of NMDA receptors (NMDARs) stimulates Ca
2+ -dependent signaling that leads to changes in the actin cytoskeleton, mediated by the Rho family of GTPases, resulting in postsynaptic remodeling essential for learning. We investigated how phosphorylation events downstream of NMDAR activation drive the changes in synaptic morphology that underlie aversive learning. Large-scale phosphoproteomic analyses of protein kinase targets in mouse striatal/accumbal slices revealed that NMDAR activation resulted in the phosphorylation of 194 proteins, including RhoA regulators such as ARHGEF2 and ARHGAP21. Phosphorylation of ARHGEF2 by the Ca2+ -dependent protein kinase CaMKII enhanced its RhoGEF activity, thereby activating RhoA and its downstream effector Rho-associated kinase (ROCK/Rho-kinase). Further phosphoproteomic analysis identified 221 ROCK targets, including the postsynaptic scaffolding protein SHANK3, which is crucial for its interaction with NMDARs and other postsynaptic scaffolding proteins. ROCK-mediated phosphorylation of SHANK3 in the NAc was essential for spine growth and aversive learning. These findings demonstrate that NMDAR activation initiates a phosphorylation cascade crucial for learning and memory.- Published
- 2024
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4. KANPHOS: Kinase-associated neural phospho-signaling database for data-driven research.
- Author
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Kannon T, Murashige S, Nishioka T, Amano M, Funahashi Y, Tsuboi D, Yamahashi Y, Nagai T, Kaibuchi K, and Yoshimoto J
- Abstract
Protein phosphorylation, a key regulator of cellular processes, plays a central role in brain function and is implicated in neurological disorders. Information on protein phosphorylation is expected to be a clue for understanding various neuropsychiatric disorders and developing therapeutic strategies. Nonetheless, existing databases lack a specific focus on phosphorylation events in the brain, which are crucial for investigating the downstream pathway regulated by neurotransmitters. To overcome the gap, we have developed a web-based database named "Kinase-Associated Neural PHOspho-Signaling (KANPHOS)." This paper presents the design concept, detailed features, and a series of improvements for KANPHOS. KANPHOS is designed to support data-driven research by fulfilling three key objectives: (1) enabling the search for protein kinases and their substrates related to extracellular signals or diseases; (2) facilitating a consolidated search for information encompassing phosphorylated substrate genes, proteins, mutant mice, diseases, and more; and (3) offering integrated functionalities to support pathway and network analysis. KANPHOS is also equipped with API functionality to interact with external databases and analysis tools, enhancing its utility in data-driven investigations. Those key features represent a critical step toward unraveling the complex landscape of protein phosphorylation in the brain, with implications for elucidating the molecular mechanisms underlying neurological disorders. KANPHOS is freely accessible to all researchers at https://kanphos.jp., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 Kannon, Murashige, Nishioka, Amano, Funahashi, Tsuboi, Yamahashi, Nagai, Kaibuchi and Yoshimoto.)
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- 2024
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5. Neuromodulator regulation and emotions: insights from the crosstalk of cell signaling.
- Author
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Tsuboi D, Nagai T, Yoshimoto J, and Kaibuchi K
- Abstract
The unraveling of the regulatory mechanisms that govern neuronal excitability is a major challenge for neuroscientists worldwide. Neurotransmitters play a critical role in maintaining the balance between excitatory and inhibitory activity in the brain. The balance controls cognitive functions and emotional responses. Glutamate and γ-aminobutyric acid (GABA) are the primary excitatory and inhibitory neurotransmitters of the brain, respectively. Disruptions in the balance between excitatory and inhibitory transmission are implicated in several psychiatric disorders, including anxiety disorders, depression, and schizophrenia. Neuromodulators such as dopamine and acetylcholine control cognition and emotion by regulating the excitatory/inhibitory balance initiated by glutamate and GABA. Dopamine is closely associated with reward-related behaviors, while acetylcholine plays a role in aversive and attentional behaviors. Although the physiological roles of neuromodulators have been extensively studied neuroanatomically and electrophysiologically, few researchers have explored the interplay between neuronal excitability and cell signaling and the resulting impact on emotion regulation. This review provides an in-depth understanding of "cell signaling crosstalk" in the context of neuronal excitability and emotion regulation. It also anticipates that the next generation of neurochemical analyses, facilitated by integrated phosphorylation studies, will shed more light on this topic., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 Tsuboi, Nagai, Yoshimoto and Kaibuchi.)
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- 2024
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6. Neuroproteomic mapping of kinases and their substrates downstream of acetylcholine: finding and implications.
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Yamahashi Y, Tsuboi D, Funahashi Y, and Kaibuchi K
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- Humans, Receptor, Muscarinic M1 metabolism, Donepezil pharmacology, Donepezil therapeutic use, Signal Transduction, Acetylcholine pharmacology, Acetylcholine therapeutic use, Alzheimer Disease drug therapy
- Abstract
Introduction: Since the emergence of the cholinergic hypothesis of Alzheimer's disease (AD), acetylcholine has been viewed as a mediator of learning and memory. Donepezil improves AD-associated learning deficits and memory loss by recovering brain acetylcholine levels. However, it is associated with side effects due to global activation of acetylcholine receptors. Muscarinic acetylcholine receptor M1 (M1R), a key mediator of learning and memory, has been an alternative target. The importance of targeting a specific pathway downstream of M1R has recently been recognized. Elucidating signaling pathways beyond M1R that lead to learning and memory holds important clues for AD therapeutic strategies., Areas Covered: This review first summarizes the role of acetylcholine in aversive learning, one of the outputs used for preliminary AD drug screening. It then describes the phosphoproteomic approach focused on identifying acetylcholine intracellular signaling pathways leading to aversive learning. Finally, the intracellular mechanism of donepezil and its effect on learning and memory is discussed., Expert Opinion: The elucidation of signaling pathways beyond M1R by phosphoproteomic approach offers a platform for understanding the intracellular mechanism of AD drugs and for developing AD therapeutic strategies. Clarifying the molecular mechanism that links the identified acetylcholine signaling to AD pathophysiology will advance the development of AD therapeutic strategies.
- Published
- 2023
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7. LIS1 RNA-binding orchestrates the mechanosensitive properties of embryonic stem cells in AGO2-dependent and independent ways.
- Author
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Kshirsagar A, Doroshev SM, Gorelik A, Olender T, Sapir T, Tsuboi D, Rosenhek-Goldian I, Malitsky S, Itkin M, Argoetti A, Mandel-Gutfreund Y, Cohen SR, Hanna JH, Ulitsky I, Kaibuchi K, and Reiner O
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- Animals, Mice, Blastocyst cytology, Blastocyst metabolism, Cell Survival, Embryo, Mammalian cytology, Embryo, Mammalian metabolism, Pluripotent Stem Cells, Protein Interaction Maps, 1-Alkyl-2-acetylglycerophosphocholine Esterase metabolism, Embryonic Stem Cells cytology, Embryonic Stem Cells metabolism, Microtubule-Associated Proteins metabolism, Argonaute Proteins metabolism
- Abstract
Lissencephaly-1 (LIS1) is associated with neurodevelopmental diseases and is known to regulate the molecular motor cytoplasmic dynein activity. Here we show that LIS1 is essential for the viability of mouse embryonic stem cells (mESCs), and it governs the physical properties of these cells. LIS1 dosage substantially affects gene expression, and we uncovered an unexpected interaction of LIS1 with RNA and RNA-binding proteins, most prominently the Argonaute complex. We demonstrate that LIS1 overexpression partially rescued the extracellular matrix (ECM) expression and mechanosensitive genes conferring stiffness to Argonaute null mESCs. Collectively, our data transforms the current perspective on the roles of LIS1 in post-transcriptional regulation underlying development and mechanosensitive processes., (© 2023. The Author(s).)
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- 2023
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8. Phosphorylation Signals Downstream of Dopamine Receptors in Emotional Behaviors: Association with Preference and Avoidance.
- Author
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Zhang X, Tsuboi D, Funahashi Y, Yamahashi Y, Kaibuchi K, and Nagai T
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- Dopaminergic Neurons metabolism, Neurotransmitter Agents metabolism, Nucleus Accumbens metabolism, Phosphorylation, Receptors, Dopamine metabolism, Transcription Factors metabolism, Dopamine metabolism, Ventral Tegmental Area metabolism
- Abstract
Dopamine regulates emotional behaviors, including rewarding and aversive behaviors, through the mesolimbic dopaminergic pathway, which projects dopamine neurons from the ventral tegmental area to the nucleus accumbens (NAc). Protein phosphorylation is critical for intracellular signaling pathways and physiological functions, which are regulated by neurotransmitters in the brain. Previous studies have demonstrated that dopamine stimulated the phosphorylation of intracellular substrates, such as receptors, ion channels, and transcription factors, to regulate neuronal excitability and synaptic plasticity through dopamine receptors. We also established a novel database called KANPHOS that provides information on phosphorylation signals downstream of monoamines identified by our kinase substrate screening methods, including dopamine, in addition to those reported in the literature. Recent advances in proteomics techniques have enabled us to clarify the mechanisms through which dopamine controls rewarding and aversive behaviors through signal pathways in the NAc. In this review, we discuss the intracellular phosphorylation signals regulated by dopamine in these two emotional behaviors.
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- 2022
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9. Dopamine drives neuronal excitability via KCNQ channel phosphorylation for reward behavior.
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Tsuboi D, Otsuka T, Shimomura T, Faruk MO, Yamahashi Y, Amano M, Funahashi Y, Kuroda K, Nishioka T, Kobayashi K, Sano H, Nagai T, Yamada K, Tzingounis AV, Nambu A, Kubo Y, Kawaguchi Y, and Kaibuchi K
- Subjects
- Animals, Mice, Mice, Inbred C57BL, Neurons metabolism, Phosphorylation, Receptors, Dopamine D1 metabolism, Reward, Dopamine metabolism, KCNQ2 Potassium Channel metabolism, Mental Disorders metabolism, Nerve Tissue Proteins metabolism
- Abstract
Dysfunctional dopamine signaling is implicated in various neuropsychological disorders. Previously, we reported that dopamine increases D1 receptor (D1R)-expressing medium spiny neuron (MSN) excitability and firing rates in the nucleus accumbens (NAc) via the PKA/Rap1/ERK pathway to promote reward behavior. Here, the results show that the D1R agonist, SKF81297, inhibits KCNQ-mediated currents and increases D1R-MSN firing rates in murine NAc slices, which is abolished by ERK inhibition. In vitro ERK phosphorylates KCNQ2 at Ser414 and Ser476; in vivo, KCNQ2 is phosphorylated downstream of dopamine signaling in NAc slices. Conditional deletion of Kcnq2 in D1R-MSNs reduces the inhibitory effect of SKF81297 on KCNQ channel activity, while enhancing neuronal excitability and cocaine-induced reward behavior. These effects are restored by wild-type, but not phospho-deficient KCNQ2. Hence, D1R-ERK signaling controls MSN excitability via KCNQ2 phosphorylation to regulate reward behavior, making KCNQ2 a potential therapeutical target for psychiatric diseases with a dysfunctional reward circuit., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2022 The Author(s). Published by Elsevier Inc. All rights reserved.)
- Published
- 2022
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10. Rho-Rho-Kinase Regulates Ras-ERK Signaling Through SynGAP1 for Dendritic Spine Morphology.
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Wu M, Funahashi Y, Takano T, Hossen E, Ahammad RU, Tsuboi D, Amano M, Yamada K, and Kaibuchi K
- Subjects
- 14-3-3 Proteins metabolism, Animals, HeLa Cells, Hippocampus metabolism, Humans, Mice, Mice, Inbred C57BL, Mice, Inbred ICR, N-Methylaspartate metabolism, rhoA GTP-Binding Protein, Dendritic Spines metabolism, Long-Term Potentiation physiology, ras GTPase-Activating Proteins metabolism
- Abstract
The structural plasticity of dendritic spines plays a critical role in NMDA-induced long-term potentiation (LTP) in the brain. The small GTPases RhoA and Ras are considered key regulators of spine morphology and enlargement. However, the regulatory interaction between RhoA and Ras underlying NMDA-induced spine enlargement is largely unknown. In this study, we found that Rho-kinase/ROCK, an effector of RhoA, phosphorylated SynGAP1 (a synaptic Ras-GTPase activating protein) at Ser842 and increased its interaction with 14-3-3ζ, thereby activating Ras-ERK signaling in a reconstitution system in HeLa cells. We also found that the stimulation of NMDA receptor by glycine treatment for LTP induction stimulated SynGAP1 phosphorylation, Ras-ERK activation, spine enlargement and SynGAP1 delocalization from the spines in striatal neurons, and these effects were prevented by Rho-kinase inhibition. Rho-kinase-mediated phosphorylation of SynGAP1 appeared to increase its dissociation from PSD95, a postsynaptic scaffolding protein located at postsynaptic density, by forming a complex with 14-3-3ζ. These results suggest that Rho-kinase phosphorylates SynGAP1 at Ser842, thereby activating the Ras-ERK pathway for NMDA-induced morphological changes in dendritic spines., (© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2022
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11. Phosphoproteomic of the acetylcholine pathway enables discovery of the PKC-β-PIX-Rac1-PAK cascade as a stimulatory signal for aversive learning.
- Author
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Yamahashi Y, Lin YH, Mouri A, Iwanaga S, Kawashima K, Tokumoto Y, Watanabe Y, Faruk MO, Zhang X, Tsuboi D, Nakano T, Saito N, Nagai T, Yamada K, and Kaibuchi K
- Subjects
- Animals, Mice, Protein Kinase C, Donepezil pharmacology, Brain, p21-Activated Kinases, Acetylcholine
- Abstract
Acetylcholine is a neuromodulator critical for learning and memory. The cholinesterase inhibitor donepezil increases brain acetylcholine levels and improves Alzheimer's disease (AD)-associated learning disabilities. Acetylcholine activates striatal/nucleus accumbens dopamine receptor D2-expressing medium spiny neurons (D2R-MSNs), which regulate aversive learning through muscarinic receptor M1 (M1R). However, how acetylcholine stimulates learning beyond M1Rs remains unresolved. Here, we found that acetylcholine stimulated protein kinase C (PKC) in mouse striatal/nucleus accumbens. Our original kinase-oriented phosphoproteomic analysis revealed 116 PKC substrate candidates, including Rac1 activator β-PIX. Acetylcholine induced β-PIX phosphorylation and activation, thereby stimulating Rac1 effector p21-activated kinase (PAK). Aversive stimulus activated the M1R-PKC-PAK pathway in mouse D2R-MSNs. D2R-MSN-specific expression of PAK mutants by the Cre-Flex system regulated dendritic spine structural plasticity and aversive learning. Donepezil induced PAK activation in both accumbal D2R-MSNs and in the CA1 region of the hippocampus and enhanced D2R-MSN-mediated aversive learning. These findings demonstrate that acetylcholine stimulates M1R-PKC-β-PIX-Rac1-PAK signaling in D2R-MSNs for aversive learning and imply the cascade's therapeutic potential for AD as aversive learning is used to preliminarily screen AD drugs., (© 2022. The Author(s).)
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- 2022
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12. Muscarinic signaling regulates voltage-gated potassium channel KCNQ2 phosphorylation in the nucleus accumbens via protein kinase C for aversive learning.
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Faruk MO, Tsuboi D, Yamahashi Y, Funahashi Y, Lin YH, Ahammad RU, Hossen E, Amano M, Nishioka T, Tzingounis AV, Yamada K, Nagai T, and Kaibuchi K
- Subjects
- Animals, Carbachol pharmacology, Cholinesterase Inhibitors pharmacology, Donepezil pharmacology, KCNQ2 Potassium Channel genetics, Male, Mice, Mice, Inbred C57BL, Mice, Knockout, Muscarinic Agonists pharmacology, Muscarinic Antagonists pharmacology, Nerve Tissue Proteins genetics, Phosphorylation, Receptor, Muscarinic M2 drug effects, Avoidance Learning physiology, KCNQ2 Potassium Channel metabolism, Nerve Tissue Proteins metabolism, Nucleus Accumbens metabolism, Parasympathetic Nervous System physiology, Protein Kinase C metabolism, Receptors, Muscarinic physiology
- Abstract
The nucleus accumbens (NAc) plays critical roles in emotional behaviors, including aversive learning. Aversive stimuli such as an electric foot shock increase acetylcholine (ACh) in the NAc, and muscarinic signaling appears to increase neuronal excitability and aversive learning. Muscarinic signaling inhibits the voltage-dependent potassium KCNQ current which regulates neuronal excitability, but the regulatory mechanism has not been fully elucidated. Phosphorylation of KCNQ2 at threonine 217 (T217) and its inhibitory effect on channel activity were predicted. However, whether and how muscarinic signaling phosphorylates KCNQ2 in vivo remains unclear. Here, we found that PKC directly phosphorylated KCNQ2 at T217 in vitro. Carbachol and a muscarinic M1 receptor (M1R) agonist facilitated KCNQ2 phosphorylation at T217 in NAc/striatum slices in a PKC-dependent manner. Systemic administration of the cholinesterase inhibitor donepezil, which is commonly used to treat dementia, and electric foot shock to mice induced the phosphorylation of KCNQ2 at T217 in the NAc, whereas phosphorylation was suppressed by an M1R antagonist. Conditional deletion of Kcnq2 in the NAc enhanced electric foot shock induced aversive learning. Our findings indicate that muscarinic signaling induces the phosphorylation of KCNQ2 at T217 via PKC activation for aversive learning., (© 2021 International Society for Neurochemistry.)
- Published
- 2022
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13. KANPHOS: A Database of Kinase-Associated Neural Protein Phosphorylation in the Brain.
- Author
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Ahammad RU, Nishioka T, Yoshimoto J, Kannon T, Amano M, Funahashi Y, Tsuboi D, Faruk MO, Yamahashi Y, Yamada K, Nagai T, and Kaibuchi K
- Subjects
- Animals, Calcium Channels metabolism, MAP Kinase Signaling System, Male, Mice, Inbred C57BL, Phosphoproteins metabolism, Phosphorylation, Receptor, Adenosine A2A metabolism, Substrate Specificity, Mice, Brain metabolism, Databases, Protein, Neurons metabolism, Protein Kinases metabolism
- Abstract
Protein phosphorylation plays critical roles in a variety of intracellular signaling pathways and physiological functions that are controlled by neurotransmitters and neuromodulators in the brain. Dysregulation of these signaling pathways has been implicated in neurodevelopmental disorders, including autism spectrum disorder, attention deficit hyperactivity disorder and schizophrenia. While recent advances in mass spectrometry-based proteomics have allowed us to identify approximately 280,000 phosphorylation sites, it remains largely unknown which sites are phosphorylated by which kinases. To overcome this issue, previously, we developed methods for comprehensive screening of the target substrates of given kinases, such as PKA and Rho-kinase, upon stimulation by extracellular signals and identified many candidate substrates for specific kinases and their phosphorylation sites. Here, we developed a novel online database to provide information about the phosphorylation signals identified by our methods, as well as those previously reported in the literature. The "KANPHOS" (Kinase-Associated Neural Phospho-Signaling) database and its web portal were built based on a next-generation XooNIps neuroinformatics tool. To explore the functionality of the KANPHOS database, we obtained phosphoproteomics data for adenosine-A2A-receptor signaling and its downstream MAPK-mediated signaling in the striatum/nucleus accumbens, registered them in KANPHOS, and analyzed the related pathways.
- Published
- 2021
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14. Preparation of Fine-Drugs Layered Spherical Particles with Good Micromeritic and Dissolution Properties through Ultra Cryo-Milling and Mechanical Powder Processing.
- Author
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Tsuboi D, Kondo K, and Niwa T
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- Chemistry, Pharmaceutical, Drug Compounding, Particle Size, Powders, Solubility, Anticonvulsants chemistry, Phenytoin chemistry
- Abstract
The particles of phenytoin (Phe), a poorly water-soluble model drug, were bead-milled alone or co-milled with a hydrophilic waxy additive using an ultra cryo-milling technique in liquid nitrogen (LN
2 ) to improve its dissolution properties. However, the micronized drug particles adhered and aggregated, resulting in poor handling in manufacturing processes such as blending or tableting. To improve the dissolution profile and powder properties of the drug simultaneously, the milled products were secondarily processed together with larger spherical particles by mechanical powder processing. These secondary products were composite particles with a core-shell structure, with fine drug particles adhered and deposited on the core, based on order mixing theory. As a core, three types/sizes of spherical pharmaceutical excipient particles were applied. The resultant composite particles produced much faster release profiles than just milled or co-milled mixtures. In addition, the composite particles showed good micromeritic properties depending on the size of the core particles. These results indicate that the ultra cryo-milling and subsequent dry composite mixing is a potential approach for developing drug particles with improved dissolution.- Published
- 2021
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15. Prickle2 and Igsf9b Coordinately Regulate the Cytoarchitecture of the Axon Initial Segment.
- Author
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Chowdhury MIH, Nishioka T, Mishima N, Ohtsuka T, Kaibuchi K, and Tsuboi D
- Subjects
- Animals, Ankyrins genetics, Ankyrins metabolism, Autism Spectrum Disorder genetics, Autism Spectrum Disorder metabolism, Epilepsy genetics, Epilepsy metabolism, LIM Domain Proteins genetics, Membrane Proteins genetics, Mice, Mice, Knockout, Nerve Tissue Proteins genetics, Axons metabolism, Hippocampus metabolism, LIM Domain Proteins metabolism, Membrane Proteins metabolism, Nerve Tissue Proteins metabolism
- Abstract
Prickle2 has been identified in genetic studies of subjects with autism spectrum disorder (ASD) and epilepsy, but the pathological mechanism of Prickle2 remains to be fully understood. Proteomic analysis of Prickle2 with mass spectrometry revealed twenty-eight Prickle2 interactors, including immunoglobulin superfamily member 9b (Igsf9b), in the brain. Here, because Igsf9 family proteins are associated with psychiatric diseases and seizures, we studied the physiological interaction between Prickle2 and Igsf9b. Prickle2 colocalized with Igsf9b in cultured hippocampal neurons. Knockdown of Prickle2 affected the subcellular localization of Igsf9b. Interestingly, Igsf9b localized along axonal processes in a pattern opposite to the ASD-related molecule ANK3/AnkG. AnkG is a major component of the axon initial segment (AIS), where a variety of ASD and epilepsy susceptibility proteins accumulate. Igsf9b-knockdown neurons displayed altered AnkG localization. Prickle2 depletion caused defects in AnkG and voltage-gated Na+ channel localization, resulting in altered network activity. These results support the idea that Prickle2 regulates AnkG distribution by controlling the proper localization of Igsf9b. The novel function of Prickle2 in AIS cytoarchitecture provides new insights into the shared pathology of ASD and epilepsy.Key words: Prickle2, Igsf9b, axon initial segment, neuronal excitability, ASD.
- Published
- 2020
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16. Pathological Progression Induced by the Frontotemporal Dementia-Associated R406W Tau Mutation in Patient-Derived iPSCs.
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Nakamura M, Shiozawa S, Tsuboi D, Amano M, Watanabe H, Maeda S, Kimura T, Yoshimatsu S, Kisa F, Karch CM, Miyasaka T, Takashima A, Sahara N, Hisanaga SI, Ikeuchi T, Kaibuchi K, and Okano H
- Subjects
- Calpain metabolism, Disease Progression, Disease Susceptibility, Frontotemporal Dementia metabolism, Frontotemporal Dementia physiopathology, Humans, Induced Pluripotent Stem Cells cytology, Mitochondria metabolism, Neurons metabolism, Phosphorylation, Phosphotransferases metabolism, tau Proteins metabolism, Alleles, Amino Acid Substitution, Frontotemporal Dementia etiology, Induced Pluripotent Stem Cells metabolism, Mutation, tau Proteins genetics
- Abstract
Mutations in the microtubule-associated protein tau (MAPT) gene are known to cause familial frontotemporal dementia (FTD). The R406W tau mutation is a unique missense mutation whose patients have been reported to exhibit Alzheimer's disease (AD)-like phenotypes rather than the more typical FTD phenotypes. In this study, we established patient-derived induced pluripotent stem cell (iPSC) models to investigate the disease pathology induced by the R406W mutation. We generated iPSCs from patients and established isogenic lines using CRISPR/Cas9. The iPSCs were induced into cerebral organoids, which were dissociated into cortical neurons with high purity. In this neuronal culture, the mutant tau protein exhibited reduced phosphorylation levels and was increasingly fragmented by calpain. Furthermore, the mutant tau protein was mislocalized and the axons of the patient-derived neurons displayed morphological and functional abnormalities, which were rescued by microtubule stabilization. The findings of our study provide mechanistic insight into tau pathology and a potential for therapeutic intervention., (Copyright © 2019 The Author(s). Published by Elsevier Inc. All rights reserved.)
- Published
- 2019
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17. Comprehensive analysis of kinase-oriented phospho-signalling pathways.
- Author
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Amano M, Nishioka T, Tsuboi D, Kuroda K, Funahashi Y, Yamahashi Y, and Kaibuchi K
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- Animals, Humans, Phosphoproteins genetics, Protein Kinases genetics, Phosphoproteins metabolism, Protein Kinases metabolism, Proteomics, Signal Transduction
- Abstract
Accumulating information on eukaryotic protein phosphorylation implies a large and complicated phospho-signalling network in various cellular processes. Although a large number of protein phosphorylation sites have been detected, their physiological consequences and the linkage between each phosphorylation site and the responsible protein kinase remain largely unexplored. To understand kinase-oriented phospho-signalling pathways, we have developed novel substrate screening technologies. In this review, we described the in vitro and in vivo screening methods named kinase-interacting substrate screening analysis and kinase-oriented substrate screening analysis, respectively., (© The Author(s) 2018. Published by Oxford University Press on behalf of the Japanese Biochemical Society. All rights reserved.)
- Published
- 2019
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18. In Vivo Identification of Protein Kinase Substrates by Kinase-Oriented Substrate Screening (KIOSS).
- Author
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Nishioka T, Amano M, Funahashi Y, Tsuboi D, Yamahashi Y, and Kaibuchi K
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- Animals, HeLa Cells, Humans, Mice, Phosphorylation, Tumor Cells, Cultured, Protein Kinases metabolism, Substrate Specificity
- Abstract
Protein phosphorylation plays a critical role in the regulation of cellular function. Information on protein phosphorylation and the responsible kinases is important for understanding intracellular signaling. A method for in vivo screening of kinase substrates named KIOSS (kinase-oriented substrate screening) has been developed. This protocol provides a method that utilizes phosphoprotein-binding modules such as 14-3-3 protein, the pin1-WW domain, and the chek2-FHA domain as biological filters to successfully enrich phosphorylated proteins related to intracellular signaling rather than housekeeping and/or structural proteins. More than 1000 substrate candidates for PKA, PKC, MAPK, and Rho-kinase in HeLa cells, as well as phosphorylation downstream of D1R, NMDAR, adenosine A2a receptor, PKA, PKC, MAPK, and Rho-kinase in mouse brain slice cultures have been identified by this method. An online database named KANPHOS (Kinase-Associated Neural Phospho-Signaling) provides the phosphorylation signals identified by these studies, as well as those previously reported in the literature. © 2019 by John Wiley & Sons, Inc., (© 2019 John Wiley & Sons, Inc.)
- Published
- 2019
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19. Phosphoproteomics of the Dopamine Pathway Enables Discovery of Rap1 Activation as a Reward Signal In Vivo.
- Author
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Nagai T, Nakamuta S, Kuroda K, Nakauchi S, Nishioka T, Takano T, Zhang X, Tsuboi D, Funahashi Y, Nakano T, Yoshimoto J, Kobayashi K, Uchigashima M, Watanabe M, Miura M, Nishi A, Kobayashi K, Yamada K, Amano M, and Kaibuchi K
- Subjects
- Action Potentials physiology, Animals, Benzazepines pharmacology, Cocaine pharmacology, Colforsin pharmacology, Corpus Striatum drug effects, Corpus Striatum metabolism, Cyclic AMP-Dependent Protein Kinases metabolism, Dopamine pharmacology, Enzyme Activation, Extracellular Signal-Regulated MAP Kinases metabolism, Extracellular Signal-Regulated MAP Kinases physiology, Guanine Nucleotide Exchange Factors metabolism, Mice, Mice, Knockout, Neurons metabolism, Neurons physiology, Nucleus Accumbens metabolism, Phosphorylation drug effects, rap1 GTP-Binding Proteins genetics, Dopamine metabolism, Phosphoproteins metabolism, Proteome metabolism, Proteomics, Receptors, Dopamine D1 metabolism, Reward, Signal Transduction drug effects, rap1 GTP-Binding Proteins metabolism
- Abstract
Dopamine (DA) type 1 receptor (D1R) signaling in the striatum presumably regulates neuronal excitability and reward-related behaviors through PKA. However, whether and how D1Rs and PKA regulate neuronal excitability and behavior remain largely unknown. Here, we developed a phosphoproteomic analysis method to identify known and novel PKA substrates downstream of the D1R and obtained more than 100 candidate substrates, including Rap1 GEF (Rasgrp2). We found that PKA phosphorylation of Rasgrp2 activated its guanine nucleotide-exchange activity on Rap1. Cocaine exposure activated Rap1 in the nucleus accumbens in mice. The expression of constitutively active PKA or Rap1 in accumbal D1R-expressing medium spiny neurons (D1R-MSNs) enhanced neuronal firing rates and behavioral responses to cocaine exposure through MAPK. Knockout of Rap1 in the accumbal D1R-MSNs was sufficient to decrease these phenotypes. These findings demonstrate a novel DA-PKA-Rap1-MAPK intracellular signaling mechanism in D1R-MSNs that increases neuronal excitability to enhance reward-related behaviors., (Copyright © 2016 Elsevier Inc. All rights reserved.)
- Published
- 2016
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20. Single-Cell Memory Regulates a Neural Circuit for Sensory Behavior.
- Author
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Kobayashi K, Nakano S, Amano M, Tsuboi D, Nishioka T, Ikeda S, Yokoyama G, Kaibuchi K, and Mori I
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- Animals, Caenorhabditis elegans genetics, Caenorhabditis elegans Proteins metabolism, Calcium-Calmodulin-Dependent Protein Kinase Type 1 metabolism, Calcium-Calmodulin-Dependent Protein Kinase Type 4 metabolism, raf Kinases metabolism, Caenorhabditis elegans metabolism, Memory physiology, Nerve Net physiology, Neuronal Plasticity physiology, Signal Transduction physiology
- Abstract
Unveiling the molecular and cellular mechanisms underlying memory has been a challenge for the past few decades. Although synaptic plasticity is proven to be essential for memory formation, the significance of "single-cell memory" still remains elusive. Here, we exploited a primary culture system for the analysis of C. elegans neurons and show that a single thermosensory neuron has an ability to form, retain, and reset a temperature memory. Genetic and proteomic analyses found that the expression of the single-cell memory exhibits inter-individual variability, which is controlled by the evolutionarily conserved CaMKI/IV and Raf pathway. The variable responses of a sensory neuron influenced the neural activity of downstream interneurons, suggesting that modulation of the sensory neurons ultimately determines the behavioral output in C. elegans. Our results provide proof of single-cell memory and suggest that the individual differences in neural responses at the single-cell level can confer individuality., (Copyright © 2016 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2016
- Full Text
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21. Disrupted-in-schizophrenia 1 regulates transport of ITPR1 mRNA for synaptic plasticity.
- Author
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Tsuboi D, Kuroda K, Tanaka M, Namba T, Iizuka Y, Taya S, Shinoda T, Hikita T, Muraoka S, Iizuka M, Nimura A, Mizoguchi A, Shiina N, Sokabe M, Okano H, Mikoshiba K, and Kaibuchi K
- Subjects
- 3' Untranslated Regions genetics, Animals, Biological Transport, Cytoplasmic Granules metabolism, Dendrites metabolism, Dendrites ultrastructure, Hippocampus cytology, Humans, Mice, Mice, Inbred C57BL, Nerve Tissue Proteins deficiency, Nerve Tissue Proteins genetics, Neuronal Plasticity genetics, Protein Binding, Protein Interaction Mapping, RNA Interference, RNA-Binding Proteins genetics, Recombinant Fusion Proteins metabolism, Hippocampus metabolism, Inositol 1,4,5-Trisphosphate Receptors genetics, Nerve Tissue Proteins physiology, Neuronal Plasticity physiology, Proteins physiology, RNA, Messenger metabolism, RNA-Binding Proteins physiology
- Abstract
Disrupted-in-schizophrenia 1 (DISC1) is a susceptibility gene for major psychiatric disorders, including schizophrenia. DISC1 has been implicated in neurodevelopment in relation to scaffolding signal complexes. Here we used proteomic analysis to screen for DISC1 interactors and identified several RNA-binding proteins, such as hematopoietic zinc finger (HZF), that act as components of RNA-transporting granules. HZF participates in the mRNA localization of inositol-1,4,5-trisphosphate receptor type 1 (ITPR1), which plays a key role in synaptic plasticity. DISC1 colocalizes with HZF and ITPR1 mRNA in hippocampal dendrites and directly associates with neuronal mRNAs, including ITPR1 mRNA. The binding potential of DISC1 for ITPR1 mRNA is facilitated by HZF. Studies of Disc1-knockout mice have revealed that DISC1 regulates the dendritic transport of Itpr1 mRNA by directly interacting with its mRNA. The DISC1-mediated mRNA regulation is involved in synaptic plasticity. We show that DISC1 binds ITPR1 mRNA with HZF, thereby regulating its dendritic transport for synaptic plasticity.
- Published
- 2015
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22. Identification of Rare, Single-Nucleotide Mutations in NDE1 and Their Contributions to Schizophrenia Susceptibility.
- Author
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Kimura H, Tsuboi D, Wang C, Kushima I, Koide T, Ikeda M, Iwayama Y, Toyota T, Yamamoto N, Kunimoto S, Nakamura Y, Yoshimi A, Banno M, Xing J, Takasaki Y, Yoshida M, Aleksic B, Uno Y, Okada T, Iidaka T, Inada T, Suzuki M, Ujike H, Kunugi H, Kato T, Yoshikawa T, Iwata N, Kaibuchi K, and Ozaki N
- Subjects
- Adult, Exons, Female, Genetic Predisposition to Disease, Humans, Male, Middle Aged, Polymorphism, Single Nucleotide, Bipolar Disorder genetics, Child Development Disorders, Pervasive genetics, Microtubule-Associated Proteins genetics, Schizophrenia genetics
- Abstract
Background: Nuclear distribution E homolog 1 (NDE1), located within chromosome 16p13.11, plays an essential role in microtubule organization, mitosis, and neuronal migration and has been suggested by several studies of rare copy number variants to be a promising schizophrenia (SCZ) candidate gene. Recently, increasing attention has been paid to rare single-nucleotide variants (SNVs) discovered by deep sequencing of candidate genes, because such SNVs may have large effect sizes and their functional analysis may clarify etiopathology., Methods and Results: We conducted mutation screening of NDE1 coding exons using 433 SCZ and 145 pervasive developmental disorders samples in order to identify rare single nucleotide variants with a minor allele frequency ≤5%. We then performed genetic association analysis using a large number of unrelated individuals (3554 SCZ, 1041 bipolar disorder [BD], and 4746 controls). Among the discovered novel rare variants, we detected significant associations between SCZ and S214F (P = .039), and between BD and R234C (P = .032). Furthermore, functional assays showed that S214F affected axonal outgrowth and the interaction between NDE1 and YWHAE (14-3-3 epsilon; a neurodevelopmental regulator)., Conclusions: This study strengthens the evidence for association between rare variants within NDE1 and SCZ, and may shed light into the molecular mechanisms underlying this severe psychiatric disorder., (© The Author 2014. Published by Oxford University Press on behalf of the Maryland Psychiatric Research Center. All rights reserved. For permissions, please email: journals.permissions@oup.com.)
- Published
- 2015
- Full Text
- View/download PDF
23. Astroglial IFITM3 mediates neuronal impairments following neonatal immune challenge in mice.
- Author
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Ibi D, Nagai T, Nakajima A, Mizoguchi H, Kawase T, Tsuboi D, Kano S, Sato Y, Hayakawa M, Lange UC, Adams DJ, Surani MA, Satoh T, Sawa A, Kaibuchi K, Nabeshima T, and Yamada K
- Subjects
- Animals, Animals, Newborn, Astrocytes immunology, COS Cells, Cells, Cultured, Chlorocebus aethiops, Cytokines biosynthesis, Cytokines genetics, Endocytosis drug effects, Endocytosis immunology, Female, Immunity, Innate drug effects, Male, Mice, Mice, Inbred C57BL, Mice, Inbred ICR, Mice, Knockout, Neurons immunology, Poly I-C pharmacology, RNA, Messenger biosynthesis, RNA, Messenger drug effects, Astrocytes pathology, Membrane Proteins physiology, Neurons pathology
- Abstract
Interferon-induced transmembrane protein 3 (IFITM3) ıplays a crucial role in the antiviral responses of Type I interferons (IFNs). The role of IFITM3 in the central nervous system (CNS) is, however, largely unknown, despite the fact that its expression is increased in the brains of patients with neurologic and neuropsychiatric diseases. Here, we show the role of IFITM3 in long-lasting neuronal impairments in mice following polyriboinosinic-polyribocytidylic acid (polyI:C, a synthetic double-stranded RNA)-induced immune challenge during the early stages of development. We found that the induction of IFITM3 expression in the brain of mice treated with polyI:C was observed only in astrocytes. Cultured astrocytes were activated by polyI:C treatment, leading to an increase in the mRNA levels of inflammatory cytokines as well as Ifitm3. When cultured neurons were treated with the conditioned medium of polyI:C-treated astrocytes (polyI:C-ACM), neurite development was impaired. These polyI:C-ACM-induced neurodevelopmental abnormalities were alleviated by ifitm3(-/-) astrocyte-conditioned medium. Furthermore, decreases of MAP2 expression, spine density, and dendrite complexity in the frontal cortex as well as memory impairment were evident in polyI:C-treated wild-type mice, but such neuronal impairments were not observed in ifitm3(-) (/) (-) mice. We also found that IFITM3 proteins were localized to the early endosomes of astrocytes following polyI:C treatment and reduced endocytic activity. These findings suggest that the induction of IFITM3 expression in astrocytes by the activation of the innate immune system during the early stages of development has non-cell autonomous effects that affect subsequent neurodevelopment, leading to neuropathological impairments and brain dysfunction, by impairing endocytosis in astrocytes., (Copyright © 2013 Wiley Periodicals, Inc.)
- Published
- 2013
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24. Behavioral alterations associated with targeted disruption of exons 2 and 3 of the Disc1 gene in the mouse.
- Author
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Kuroda K, Yamada S, Tanaka M, Iizuka M, Yano H, Mori D, Tsuboi D, Nishioka T, Namba T, Iizuka Y, Kubota S, Nagai T, Ibi D, Wang R, Enomoto A, Isotani-Sakakibara M, Asai N, Kimura K, Kiyonari H, Abe T, Mizoguchi A, Sokabe M, Takahashi M, Yamada K, and Kaibuchi K
- Subjects
- Aging drug effects, Aging pathology, Amines metabolism, Animals, Antibodies immunology, Astrocytes drug effects, Astrocytes metabolism, Astrocytes pathology, Clozapine pharmacology, Gene Expression Regulation, Developmental drug effects, Hippocampus growth & development, Hippocampus metabolism, Hippocampus pathology, Hippocampus ultrastructure, Immunohistochemistry, Maze Learning drug effects, Mice, Mice, Inbred Strains, Nerve Tissue Proteins immunology, Neuronal Plasticity drug effects, Neurons drug effects, Neurons metabolism, Neurons pathology, Phenotype, Synaptic Transmission drug effects, Time Factors, Behavior, Animal drug effects, Exons genetics, Gene Targeting, Nerve Tissue Proteins genetics
- Abstract
Disrupted-In-Schizophrenia 1 (DISC1) is a promising candidate gene for susceptibility to psychiatric disorders, including schizophrenia. DISC1 appears to be involved in neurogenesis, neuronal migration, axon/dendrite formation and synapse formation; during these processes, DISC1 acts as a scaffold protein by interacting with various partners. However, the lack of Disc1 knockout mice and a well-characterized antibody to DISC1 has made it difficult to determine the exact role of DISC1 in vivo. In this study, we generated mice lacking exons 2 and 3 of the Disc1 gene and prepared specific antibodies to the N- and C-termini of DISC1. The Disc1 mutant mice are viable and fertile, and no gross phenotypes, such as disorganization of the brain's cytoarchitecture, were observed. Western blot analysis revealed that the DISC1-specific antibodies recognize a protein with an apparent molecular mass of ~100 kDa in brain extracts from wild-type mice but not in brain extracts from DISC1 mutant mice. Immunochemical studies demonstrated that DISC1 is mainly localized to the vicinity of the Golgi apparatus in hippocampal neurons and astrocytes. A deficiency of full-length Disc1 induced a threshold shift in the induction of long-term potentiation in the dentate gyrus. The Disc1 mutant mice displayed abnormal emotional behavior as assessed by the elevated plus-maze and cliff-avoidance tests, thereby suggesting that a deficiency of full-length DISC1 may result in lower anxiety and/or higher impulsivity. Based on these results, we suggest that full-length Disc1-deficient mice and DISC1-specific antibodies are powerful tools for dissecting the pathophysiological functions of DISC1.
- Published
- 2011
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25. [Current perspective on the pathogenesis of schizophrenia from the viewpoint of risk factors such as DISC1 (corrected)].
- Author
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Kaibuchi K and Tsuboi D
- Subjects
- Animals, Humans, Kinesins physiology, Neurons physiology, Schizophrenia metabolism, Hippocampus physiology, Nerve Tissue Proteins physiology, Protein Biosynthesis physiology, RNA, Messenger physiology, Schizophrenia genetics
- Abstract
The onset of schizophrenia symptoms typically occurs in young adulthood. It most commonly manifests as hallucinations, paranoid or bizarre delusions, or disorganized speech and thinking. Schizophrenia is often accompanied by social or occupational dysfunction. Recent genetic studies revealed several probable susceptibility genes for schizophrenia such as Neuregulin1, Dysbindin and Disrupted-in-Schizophrenia-1 (DISC1). DISC1 was originally identified as the sole gene that associated with a high inheritance of schizophrenia and other psychiatric illnesses in a large Scottish family. We here review the recent advance in understanding of pathophysiological functions of DISC1. [corrected]
- Published
- 2010
26. Roles of disrupted-in-schizophrenia 1-interacting protein girdin in postnatal development of the dentate gyrus.
- Author
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Enomoto A, Asai N, Namba T, Wang Y, Kato T, Tanaka M, Tatsumi H, Taya S, Tsuboi D, Kuroda K, Kaneko N, Sawamoto K, Miyamoto R, Jijiwa M, Murakumo Y, Sokabe M, Seki T, Kaibuchi K, and Takahashi M
- Subjects
- Analysis of Variance, Animals, Animals, Newborn, Bromodeoxyuridine metabolism, Cell Differentiation genetics, Cell Movement genetics, Cells, Cultured, Chlorocebus aethiops, Dentate Gyrus cytology, Electric Stimulation methods, Embryo, Mammalian, Gene Expression Regulation, Developmental genetics, Growth Cones physiology, Humans, Immunoprecipitation methods, Membrane Potentials drug effects, Membrane Potentials genetics, Mice, Mice, Inbred C57BL, Mice, Knockout, Microfilament Proteins deficiency, Microfilament Proteins genetics, Nerve Tissue Proteins genetics, Nerve Tissue Proteins metabolism, Neurogenesis genetics, Neurons cytology, Neurons physiology, Patch-Clamp Techniques, Protein Binding, Protein Structure, Tertiary physiology, RNA Interference physiology, Rats, Transfection methods, Vesicular Transport Proteins deficiency, Vesicular Transport Proteins genetics, Dentate Gyrus embryology, Dentate Gyrus growth & development, Microfilament Proteins metabolism, Neurogenesis physiology, Vesicular Transport Proteins metabolism
- Abstract
Disrupted-In-Schizophrenia 1 (DISC1), a susceptibility gene for major psychiatric disorders, regulates neuronal migration and differentiation during mammalian brain development. Although roles for DISC1 in postnatal neurogenesis in the dentate gyrus (DG) have recently emerged, it is not known how DISC1 and its interacting proteins govern the migration, positioning, and differentiation of dentate granule cells (DGCs). Here, we report that DISC1 interacts with the actin-binding protein girdin to regulate axonal development. DGCs in girdin-deficient neonatal mice exhibit deficits in axonal sprouting in the cornu ammonis 3 region of the hippocampus. Girdin deficiency, RNA interference-mediated knockdown, and inhibition of the DISC1/girdin interaction lead to overextended migration and mispositioning of the DGCs resulting in profound cytoarchitectural disorganization of the DG. These findings identify girdin as an intrinsic factor in postnatal development of the DG and provide insights into the critical role of the DISC1/girdin interaction in postnatal neurogenesis in the DG.
- Published
- 2009
- Full Text
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27. Proteomic analysis reveals novel binding partners of dysbindin, a schizophrenia-related protein.
- Author
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Hikita T, Taya S, Fujino Y, Taneichi-Kuroda S, Ohta K, Tsuboi D, Shinoda T, Kuroda K, Funahashi Y, Uraguchi-Asaki J, Hashimoto R, and Kaibuchi K
- Subjects
- Animals, Carrier Proteins genetics, Dysbindin, Dystrophin-Associated Proteins, Exocytosis genetics, Hippocampus metabolism, Humans, Mice, Mice, Inbred C57BL, Munc18 Proteins genetics, Munc18 Proteins metabolism, Protein Binding genetics, Rats, Schizophrenia genetics, Carrier Proteins metabolism, Proteomics methods, Schizophrenia metabolism
- Abstract
Schizophrenia is a complex mental disorder with fairly high level of heritability. Dystrobrevin binding protein 1, a gene encoding dysbindin protein, is a susceptibility gene for schizophrenia that was identified by family-based association analysis. Recent studies revealed that dysbindin is involved in the exocytosis and/or formation of synaptic vesicles. However, the molecular function of dysbindin in synaptic transmission is largely unknown. To investigate the signaling pathway in which dysbindin is involved, we isolated dysbindin-interacting molecules from rat brain lysate by combining ammonium sulfate precipitation and dysbindin-affinity column chromatography, and identified dysbindin-interacting proteins by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry and liquid chromatography-tandem mass spectrometry. Proteins involved in protein localization process, including Munc18-1, were identified as dysbindin-interacting proteins. Munc18-1 was co-immunoprecipitated with dysbindin from rat brain lysate, and directly interacted with dysbindin in vitro. In primary cultured rat hippocampal neurons, a part of dysbindin was co-localized with Munc18-1 at pre-synaptic terminals. Our result suggests a role for dysbindin in synaptic vesicle exocytosis via interaction with Munc18-1.
- Published
- 2009
- Full Text
- View/download PDF
28. DISC1 regulates neurotrophin-induced axon elongation via interaction with Grb2.
- Author
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Shinoda T, Taya S, Tsuboi D, Hikita T, Matsuzawa R, Kuroda S, Iwamatsu A, and Kaibuchi K
- Subjects
- Animals, Axons drug effects, Biological Transport, Active drug effects, Brain cytology, Brain drug effects, Brain metabolism, COS Cells, Cell Enlargement, Cells, Cultured, Chlorocebus aethiops, Dose-Response Relationship, Drug, Homeostasis drug effects, Homeostasis physiology, Protein Interaction Mapping, Rats, Axons metabolism, Axons ultrastructure, GRB2 Adaptor Protein metabolism, Nerve Tissue Proteins metabolism, Neurotrophin 3 administration & dosage
- Abstract
Disrupted-in-Schizophrenia-1 (DISC1) is a candidate gene for susceptibility of schizophrenia. In the accompanying paper (Taya et al., 2006), we report that DISC1 acts as a linker between Kinesin-1 and DISC1-interacting molecules, such as NudE-like, lissencephaly-1, and 14-3-3epsilon. Here we identified growth factor receptor bound protein 2 (Grb2) as a novel DISC1-interacting molecule. Grb2 acts as an adaptor molecule that links receptor tyrosine kinases and the Ras-extracellular signal-regulated kinase (ERK) pathway. DISC1 formed a ternary complex with Grb2 and kinesin heavy chain KIF5A of Kinesin-1. In cultured rat hippocampal neurons, both DISC1 and Grb2 partially colocalized at the distal part of axons. Knockdown of DISC1 or kinesin light chains of Kinesin-1 by RNA interference inhibited the accumulation of Grb2 from the distal part of axons. Knockdown of DISC1 also inhibited the neurotrophin-3 (NT-3)-induced phosphorylation of ERK-1/2 at the distal part of axons and inhibited NT-3-induced axon elongation. These results suggest that DISC1 is required for NT-3-induced axon elongation and ERK activation at the distal part of axons by recruiting Grb2 to axonal tips.
- Published
- 2007
- Full Text
- View/download PDF
29. Regulatory machinery of UNC-33 Ce-CRMP localization in neurites during neuronal development in Caenorhabditis elegans.
- Author
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Tsuboi D, Hikita T, Qadota H, Amano M, and Kaibuchi K
- Subjects
- Amino Acid Sequence, Animals, Animals, Genetically Modified, Caenorhabditis elegans growth & development, Caenorhabditis elegans Proteins biosynthesis, Carrier Proteins genetics, Cell Cycle Proteins metabolism, Cytoskeletal Proteins, DNA, Complementary biosynthesis, DNA, Complementary genetics, Kinesins metabolism, Microinjections, Microtubule-Associated Proteins genetics, Molecular Sequence Data, Mutation genetics, Mutation, Missense genetics, Nerve Growth Factors biosynthesis, Neurites physiology, Neurons physiology, Caenorhabditis elegans metabolism, Caenorhabditis elegans Proteins genetics, Caenorhabditis elegans Proteins metabolism, Nerve Growth Factors genetics, Nerve Growth Factors metabolism, Neurites metabolism, Neurons metabolism
- Abstract
In Caenorhabditis elegans, unc-33 encodes an orthologue of the vertebrate collapsin response mediator protein (CRMP) family. We previously reported that CRMP-2 accumulated in the distal part of the growing axon of vertebrate neurons and played critical roles in axon elongation. unc-33 mutants show axonal outgrowth defects in several neurons. It has been reported that UNC-33 accumulates in neurites, whereas a missense mutation causes the mislocalization of UNC-33 from neurites to cell body, which suggests that the localization of UNC-33 in neurites is important for axonal outgrowth. However, it is unclear how UNC-33 accumulates in neurites and regulates neuronal development. In this study, to understand the regulatory mechanisms of localization of UNC-33 in neurites, we screened for the mutants that were involved in the localization of UNC-33, and identified three mutants: unc-14 (RUN domain protein), unc-51 (ULK kinase) and unc-116 (kinesin heavy chain). UNC-14 is known to associate with UNC-51. UNC-116 forms a complex with KLC-2 as Kinesin-1, a microtubule-dependent motor complex. We found that UNC-33 interacted with UNC-14 and KLC-2 in vivo. These results suggest that the UNC-14/UNC-51 complex and Kinesin-1 are involved in the localization of UNC-33 in neurites.
- Published
- 2005
- Full Text
- View/download PDF
30. CRMP-2 is involved in kinesin-1-dependent transport of the Sra-1/WAVE1 complex and axon formation.
- Author
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Kawano Y, Yoshimura T, Tsuboi D, Kawabata S, Kaneko-Kawano T, Shirataki H, Takenawa T, and Kaibuchi K
- Subjects
- Actins chemistry, Amino Acid Sequence, Animals, Caenorhabditis elegans, Cells, Cultured, Chromatography, Affinity, Cytoskeleton metabolism, DNA, Complementary metabolism, Dendrites metabolism, Glutathione Transferase metabolism, Hippocampus metabolism, Humans, Immunoprecipitation, Insecta, Intercellular Signaling Peptides and Proteins, Microscopy, Fluorescence, Molecular Sequence Data, Mutation, Neurons metabolism, Plasmids metabolism, Protein Binding, RNA Interference, RNA, Small Interfering metabolism, Rats, Swine, Transfection, Adaptor Proteins, Signal Transducing metabolism, Axons metabolism, Kinesins metabolism, Nerve Tissue Proteins physiology, Wiskott-Aldrich Syndrome Protein Family metabolism
- Abstract
A neuron has two types of highly polarized cell processes, the single axon and multiple dendrites. One of the fundamental questions of neurobiology is how neurons acquire such specific and polarized morphologies. During neuronal development, various actin-binding proteins regulate dynamics of actin cytoskeleton in the growth cones of developing axons. The regulation of actin cytoskeleton in the growth cones is thought to be involved in axon outgrowth and axon-dendrite specification. However, it is largely unknown which actin-binding proteins are involved in axon-dendrite specification and how they are transported into the developing axons. We have previously reported that collapsin response mediator protein 2 (CRMP-2) plays a critical role in axon outgrowth and axon-dendrite specification (N. Inagaki, K. Chihara, N. Arimura, C. Menager, Y. Kawano, N. Matsuo, T. Nishimura, M. Amano, and K. Kaibuchi, Nat. Neurosci. 4:781-782, 2001). Here, we found that CRMP-2 interacted with the specifically Rac1-associated protein 1 (Sra-1)/WASP family verprolin-homologous protein 1 (WAVE1) complex, which is a regulator of actin cytoskeleton. The knockdown of Sra-1 and WAVE1 by RNA interference canceled CRMP-2-induced axon outgrowth and multiple-axon formation in cultured hippocampal neurons. We also found that CRMP-2 interacted with the light chain of kinesin-1 and linked kinesin-1 to the Sra-1/WAVE1 complex. The knockdown of CRMP-2 and kinesin-1 delocalized Sra-1 and WAVE1 from the growth cones of axons. These results suggest that CRMP-2 transports the Sra-1/WAVE1 complex to axons in a kinesin-1-dependent manner and thereby regulates axon outgrowth and formation.
- Published
- 2005
- Full Text
- View/download PDF
31. Identification of a novel Cdc42 GEF that is localized to the PAT-3-mediated adhesive structure.
- Author
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Hikita T, Qadota H, Tsuboi D, Taya S, Moerman DG, and Kaibuchi K
- Subjects
- Animals, Caenorhabditis elegans cytology, Caenorhabditis elegans metabolism, Cell Adhesion Molecules metabolism, Cell Differentiation, Cell Line, Chlorocebus aethiops, Integrins metabolism, Mice, Muscles cytology, Muscles metabolism, Protein Binding, Pseudopodia metabolism, Signal Transduction, Tissue Adhesions, Caenorhabditis elegans Proteins metabolism, Guanine Nucleotide Exchange Factors metabolism, Integrin beta Chains metabolism, cdc42 GTP-Binding Protein metabolism
- Abstract
In the model organism Caenorhabditis elegans, UNC-112 is colocalized with PAT-3/beta-integrin and is a critical protein in the formation of PAT-3-mediated adhesive structure in body-wall muscle cells. However, the signaling pathway downstream of PAT-3/UNC-112 is largely unknown. To clarify the signaling pathway from PAT-3/UNC-112 to the actin cytoskeleton, we searched for and identified a novel Dbl homology/pleckstrin homology (DH/PH) domain containing protein, UIG-1 (UNC-112-interacting guanine nucleotide exchange factor-1). UIG-1 was colocalized with UNC-112 at dense bodies in body-wall muscle cells. UIG-1 showed CDC-42-specific GEF activity in vitro and induced filopodia formation in NIH 3T3 cells. Depletion of CDC-42 or PAT-3 in the developmental stage, by RNAi, prevented the formation of continuous actin filament in body-wall muscle cells. Taken together, these results suggest that UIG-1 links a PAT-3/UNC-112 complex to the CDC-42 signaling pathway during muscle formation.
- Published
- 2005
- Full Text
- View/download PDF
32. Isolation of the interacting molecules with GEX-3 by a novel functional screening.
- Author
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Tsuboi D, Qadota H, Kasuya K, Amano M, and Kaibuchi K
- Subjects
- Animals, Caenorhabditis elegans cytology, Caenorhabditis elegans embryology, Caenorhabditis elegans Proteins genetics, Humans, Microscopy, Fluorescence, RNA metabolism, Recombinant Fusion Proteins genetics, Recombinant Fusion Proteins metabolism, Caenorhabditis elegans genetics, Caenorhabditis elegans Proteins metabolism, Two-Hybrid System Techniques
- Abstract
To screen for important molecules that interact with a gene of interest in Caenorhabditis elegans (C. elegans), we established a novel functional screening system using the yeast two-hybrid system with the RNA interference technique. Our screening system makes it possible to identify the molecular machinery involved in the function of a gene of interest starting with the cDNA of this gene. As a model case, we examined the molecular machinery involved in the function of GEX-3, an essential factor of tissue morphogenesis. We identified many interacting molecules by yeast two-hybrid screening and could detect some functional interactions using this novel functional screening system.
- Published
- 2002
- Full Text
- View/download PDF
33. The GEX-2 and GEX-3 proteins are required for tissue morphogenesis and cell migrations in C. elegans.
- Author
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Soto MC, Qadota H, Kasuya K, Inoue M, Tsuboi D, Mello CC, and Kaibuchi K
- Subjects
- Amino Acid Sequence, Animals, Caenorhabditis elegans cytology, Caenorhabditis elegans Proteins genetics, Caenorhabditis elegans Proteins metabolism, Carrier Proteins genetics, Cell Compartmentation, Conserved Sequence, Genes, Helminth, Molecular Sequence Data, Morphogenesis, Oviposition genetics, Sequence Homology, Amino Acid, rac GTP-Binding Proteins genetics, Adaptor Proteins, Signal Transducing, Caenorhabditis elegans growth & development, Caenorhabditis elegans Proteins isolation & purification, Cell Movement, Drosophila Proteins
- Abstract
During body morphogenesis precisely coordinated cell movements and cell shape changes organize the newly differentiated cells of an embryo into functional tissues. Here we describe two genes, gex-2 and gex-3, whose activities are necessary for initial steps of body morphogenesis in Caenorhabditis elegans. In the absence of gex-2 and gex-3 activities, cells differentiate properly but fail to become organized. The external hypodermal cells fail to spread over and enclose the embryo and instead cluster on the dorsal side. Postembryonically gex-3 activity is required for egg laying and for proper morphogenesis of the gonad. GEX-2 and GEX-3 proteins colocalize to cell boundaries and appear to directly interact. GEX-2 and GEX-3 are highly conserved, with vertebrate homologs implicated in binding the small GTPase Rac and a GEX-3 Drosophila homolog, HEM2/NAP1/KETTE, that interacts genetically with Rac pathway mutants. Our findings suggest that GEX-2 and GEX-3 may function at cell boundaries to regulate cell migrations and cell shape changes required for proper morphogenesis and development.
- Published
- 2002
- Full Text
- View/download PDF
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