29 results on '"Trefaut Rodrigues, Miguel"'
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2. Diversification of the terrestrial frog genus Anomaloglossus (Anura, Aromobatidae) in the Guiana Shield proceeded from highlands to lowlands, with successive loss and reacquisition of endotrophy
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Vacher, Jean-Pierre, primary, Kok, Philippe J.R., additional, Trefaut Rodrigues, Miguel, additional, Lima, Albertina, additional, Hrbek, Tomas, additional, Werneck, Fernanda P., additional, Manzi, Sophie, additional, Thébaud, Christophe, additional, and Fouquet, Antoine, additional
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- 2024
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3. Relicts in the mist: Two new frog families, genera and species highlight the role of Pantepui as a biodiversity museum throughout the Cenozoic
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Fouquet, Antoine, primary, J. R. Kok, Philippe, additional, Sousa Recoder, Renato, additional, Prates, Ivan, additional, Camacho, Agustin, additional, Marques-Souza, Sergio, additional, Mario Ghellere, José, additional, McDiarmid, Roy W., additional, and Trefaut Rodrigues, Miguel, additional
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- 2023
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4. Phylogenomics, introgression, and demographic history of South American true toads (Rhinella)
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Rivera, Danielle, primary, Prates, Ivan, additional, Firneno, Thomas J., additional, Trefaut Rodrigues, Miguel, additional, Caldwell, Janalee P., additional, and Fujita, Matthew K., additional
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- 2021
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5. Geographic restriction, genetic divergence, and morphological disparity in the Brazilian Atlantic Forests: Insights from Leposoma lizards (Gymnophthalmidae, Squamata)
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Damasceno, Roberta P., primary, Carnaval, Ana Carolina, additional, Sass, Chodon, additional, Sousa Recoder, Renato, additional, Moritz, Craig, additional, and Trefaut Rodrigues, Miguel, additional
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- 2021
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6. The phylogeny of the Casque‐headed Treefrogs (Hylidae: Hylinae: Lophyohylini)
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Blotto, Boris L., primary, Lyra, Mariana L., additional, Cardoso, Monica C.S., additional, Trefaut Rodrigues, Miguel, additional, R. Dias, Iuri, additional, Marciano‐Jr, Euvaldo, additional, Dal Vechio, Francisco, additional, Orrico, Victor G.D., additional, Brandão, Reuber A., additional, Lopes de Assis, Clodoaldo, additional, Lantyer‐Silva, Amanda S.F., additional, Rutherford, Mike G., additional, Gagliardi‐Urrutia, Giussepe, additional, Solé, Mirco, additional, Baldo, Diego, additional, Nunes, Ivan, additional, Cajade, Rodrigo, additional, Torres, Ambrosio, additional, Grant, Taran, additional, Jungfer, Karl‐Heinz, additional, Silva, Helio R., additional, Haddad, Célio F.B., additional, and Faivovich, Julián, additional
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- 2020
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7. Phylogenomics, introgression, and demographic history of South American true toads (Rhinella).
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Rivera, Danielle, Prates, Ivan, Firneno, Thomas J., Trefaut Rodrigues, Miguel, Caldwell, Janalee P., and Fujita, Matthew K.
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BUFONIDAE ,INTROGRESSION (Genetics) ,UNITED States history ,NATURAL history ,GENE flow ,SPECIES hybridization ,CLUSTER analysis (Statistics) - Abstract
Copyright of Molecular Ecology is the property of Wiley-Blackwell and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2022
- Full Text
- View/download PDF
8. Chemosensory discrimination of male age by female Psammodromus algirus lizards based on femoral secretions and feces
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Fundação de Amparo à Pesquisa do Estado de São Paulo, Ministerio de Economía y Competitividad (España), Nisa Ramiro, Carolina, Rodríguez-Ruiz, Gonzalo, López Martínez, Pilar, Da Silva Junior, Pedro Ismael, Trefaut Rodrigues, Miguel, Martín Rueda, José, Fundação de Amparo à Pesquisa do Estado de São Paulo, Ministerio de Economía y Competitividad (España), Nisa Ramiro, Carolina, Rodríguez-Ruiz, Gonzalo, López Martínez, Pilar, Da Silva Junior, Pedro Ismael, Trefaut Rodrigues, Miguel, and Martín Rueda, José
- Abstract
Chemical communication plays an essential role in several social and reproductive behaviors of many animals. In lizards, the main sources of semiochemicals are femoral or pre-anal gland secretions and feces. In male lizards Psammodromus algirus, there are age-related differences in the chemical composition of femoral gland secretions and in the reproductive strategies, with older males defending territories and females, while younger males adopting sneak-mating strategies. Females flee more often from mating advances of young males than from those of old males, which are more successful in obtaining matings. This suggests that age discrimination of males may be important for females. We tested here whether females showed differential chemosensory responses to chemical cues (femoral gland secretion and feces) of males of two age classes, and whether females use information from substrate scent marks of males of different ages to select where to stay. We found that females elicited more tongue-flicks to the secretion and feces of old males than to control or secretion and feces of young males. Also, the time spent by females on a scented paper depended on the treatment, suggesting that females tended to spend more time on scent marks made with femoral secretions of old males. Adult females seemed capable to discriminate between young and old males based on chemical cues alone and showed more interest in scents of old males. However, substrate scent marks did not seem to entirely determine site selection by females, suggesting that females might need additional cues to perform the choice. These results can be explained by the different age-dependent reproductive strategies of males, which can affect differentially to females.
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- 2019
9. Chemosensory discrimination of male age by femalePsammodromus algiruslizards based on femoral secretions and feces
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Nisa Ramiro, Carolina, primary, Rodríguez‐Ruiz, Gonzalo, additional, López, Pílar, additional, da Silva Junior, Pedro Ismael, additional, Trefaut Rodrigues, Miguel, additional, and Martín, José, additional
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- 2019
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10. The phylogeny of the Casque‐headed Treefrogs (Hylidae: Hylinae: Lophyohylini).
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Blotto, Boris L., Lyra, Mariana L., Cardoso, Monica C.S., Trefaut Rodrigues, Miguel, R. Dias, Iuri, Marciano‐Jr, Euvaldo, Dal Vechio, Francisco, Orrico, Victor G.D., Brandão, Reuber A., Lopes de Assis, Clodoaldo, Lantyer‐Silva, Amanda S.F., Rutherford, Mike G., Gagliardi‐Urrutia, Giussepe, Solé, Mirco, Baldo, Diego, Nunes, Ivan, Cajade, Rodrigo, Torres, Ambrosio, Grant, Taran, and Jungfer, Karl‐Heinz
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MOLECULAR phylogeny ,HYLIDAE ,RAIN forests ,NUMBERS of species ,PHYLOGENY ,ANURA - Abstract
The South American and West Indian Casque‐headed Treefrogs (Hylidae: Hylinae: Lophyohylini) include 85 species. These are notably diverse in morphology (e.g. disparate levels of cranial hyperossification) and life history (e.g. different reproductive modes, chemical defences), have a wide distribution, and occupy habitats from the tropical rainforests to semiarid scrubland. In this paper, we present a phylogenetic analysis of this hylid tribe based on sequence fragments of up to five mitochondrial (12S, 16S, ND1, COI, Cytb) and six nuclear genes (POMC, RAG‐1, RHOD, SIAH, TNS3, TYR). We included most of its species (> 96%), in addition to a number of new species. Our results indicate: (i) the paraphyly of Trachycephalus with respect to Aparasphenodon venezolanus; (ii) the nonmonophyly of Aparasphenodon, with Argenteohyla siemersi, Corythomantis galeata and Nyctimantis rugiceps nested within it, and Ap. venezolanus nested within Trachycephalus; (iii) the polyphyly of Corythomantis; (iv) the nonmonophyly of the recognized species groups of Phyllodytes; and (v) a pervasive low support for the deep relationships among the major clades of Lophyohylini, including C. greeningi and the monotypic genera Itapotihyla and Phytotriades. To remedy the nonmonophyly of Aparasphenodon, Corythomantis, and Trachycephalus, we redefined Nyctimantis to include Aparasphenodon (with the exception of Ap. venezolanus, which we transferred to Trachycephalus), Argenteohyla, and C. galeata. Additionally, our results indicate the need for taxonomic work in the following clades: (i) Trachycephalus dibernardoi and Tr. imitatrix; (ii) Tr. atlas, Tr. mambaiensis and Tr. nigromaculatus; and (iii) Phyllodytes. On the basis of our phylogenetic results, we analyzed the evolution of skull hyperossification and reproductive biology, with emphasis on the multiple independent origins of phytotelm breeding, in the context of Anura. We also analyzed the inter‐related aspects of chemical defences, venom delivery, phragmotic behaviour, co‐ossification, and prevention of evaporative water loss. [ABSTRACT FROM AUTHOR]
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- 2021
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11. Cryptic diversity in the Hypsiboas semilineatus species group (Amphibia, Anura) with the description of a new species from the eastern Guiana Shield
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Fouquet, Antoine, Martinez, Quentin, Zeidler, Lauren, Courtois, Elodie, Gaucher, Philippe, Blanc, Michel, Dias Lima, Jucivaldo, Souza, Sergio Marques, Trefaut Rodrigues, Miguel, Kok, Philippe, Department of Bio-engineering Sciences, and Amphibian Evolution Lab
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taxonomy ,Guiana Shield ,endemism ,conservation ,Anura - Abstract
We used molecular and morphological data to investigate the hidden diversity within the Hypsiboas semilineatus species group, and more specifically within H. geographicus, an allegedly widespread species in northern South America. As a result, the identity of H. geographicus was clarified, several candidate species were detected and one of them, from the eastern Guiana Shield, is described herein as a preliminary step to resolve the taxonomy of the group. Hypsiboas diaboli- cus sp. nov. is mainly distinguished from closely-related species by an acuminate snout in lateral view, well-developed webbing between fingers and toes, and unspotted carmine/crimson colouration on the concealed surfaces of legs, feet and hands in life. The tadpole of the new species is described and is characterized by a large A-2 gap, a mostly single row of large marginal papillae, and a dark brown to black colouration. We also describe the advertisement call of the new species, which is defined as a soft call consisting of short clusters of 2–3 chuckles with a dominant frequency ranging between 1.11–1.19 kHz. Hypsiboas diabolicus sp. nov. is currently known only from the eastern Guiana Shield, and is probably endemic to that region. The new species’ range overlaps broadly with another candidate species referred to as H. aff. semi- lineatus 1. Our preliminary results stress out a high cryptic diversity in that species group and the need for a formal rede- scription of Hypsiboas geographicus based on more topotypic material than what is currently available to properly sort out the taxonomic status of several lineages in that clade.
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- 2016
12. Chemosensory discrimination of male age by female Psammodromus algirus lizards based on femoral secretions and feces.
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Nisa Ramiro, Carolina, Rodríguez‐Ruiz, Gonzalo, López, Pílar, da Silva Junior, Pedro Ismael, Trefaut Rodrigues, Miguel, and Martín, José
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AGE discrimination ,ODORS ,SECRETION ,TERRITORIAL marking (Animals) ,FECES ,ANIMAL sexual behavior - Abstract
Chemical communication plays an essential role in several social and reproductive behaviors of many animals. In lizards, the main sources of semiochemicals are femoral or pre‐anal gland secretions and feces. In male lizards Psammodromus algirus, there are age‐related differences in the chemical composition of femoral gland secretions and in the reproductive strategies, with older males defending territories and females, while younger males adopting sneak‐mating strategies. Females flee more often from mating advances of young males than from those of old males, which are more successful in obtaining matings. This suggests that age discrimination of males may be important for females. We tested here whether females showed differential chemosensory responses to chemical cues (femoral gland secretion and feces) of males of two age classes, and whether females use information from substrate scent marks of males of different ages to select where to stay. We found that females elicited more tongue‐flicks to the secretion and feces of old males than to control or secretion and feces of young males. Also, the time spent by females on a scented paper depended on the treatment, suggesting that females tended to spend more time on scent marks made with femoral secretions of old males. Adult females seemed capable to discriminate between young and old males based on chemical cues alone and showed more interest in scents of old males. However, substrate scent marks did not seem to entirely determine site selection by females, suggesting that females might need additional cues to perform the choice. These results can be explained by the different age‐dependent reproductive strategies of males, which can affect differentially to females. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
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13. Systematics of spiny–backed treefrogs (Hylidae: Osteocephalus): an Amazonian puzzle
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Jungfer, Karl-Heinz, Faivovich, Julian, Padial, José, Castroviejo-Fisher, Santiago, Lyra, Mariana, Berneck, Bianca, Iglesias, Patricia, Kok, Philippe, Macculloch, Ross, Trefaut Rodrigues, Miguel, Verdade, Vanessa, Torres Gastello, Claudia, Chaparro, Juan Carlos, Valdujo, Paula, Steffen, Reichle, Moravec, Jiri, Gvozdik, Vaclav, Gagliardi-Urrutia, Giussepe, Ernst, Raffael, De La Riva, Ignacio, Means, Bruce, Lima, Albertina, Senaris, J. Celsa, Wheeler, Ward, Biology, and Amphibian Evolution Lab
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Osteocephalus ,Tepuihyla ,systematics - Abstract
Spiny-backed tree frogs of the genus Osteocephalus are conspicuous components of the tropi- cal wet forests of the Amazon and the Guiana Shield. Here, we revise the phylogenetic rela- tionships of Osteocephalus and its sister group Tepuihyla, using up to 6134 bp of DNA sequences of nine mitochondrial and one nuclear gene for 338 specimens from eight coun- tries and 218 localities, representing 89% of the 28 currently recognized nominal species. Our phylogenetic analyses reveal (i) the paraphyly of Osteocephalus with respect to Tepuihyla, (ii) the placement of 'Hyla' warreni as sister to Tepuihyla, (iii) the non-monophyly of several currently recognized species within Osteocephalus and (iv) the presence of low (
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- 2013
14. Cryptic species in Iphisa elegans Gray, 1851 (Squamata: Gymnophthalmidae) revealed by hemipenial morphology and molecular data
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Sales Nunes, Pedro, Fouquet, Antoine, Curcio, Felipe, Kok, Philippe, Trefaut Rodrigues, Miguel, Amphibian Evolution Lab, Biology, and Ecology and Systematics
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Cryptic diversity ,Hemipenis ,CYTB ,C-MOS ,Prezygotic isolation - Abstract
Iphisa elegans Gray, 1851 is a ground-dwelling lizard widespread over Amazonia that displays a broadly conserved external morphology over its range. This wide geographical distribution and conservation of body form contrasts with the expected poor dispersal ability of the species, the tumultuous past of Amazonia, and the previously documented prevalence of cryptic species in widespread terrestrial organisms in this region. Here we investigate this homogeneity by examining hemipenial morphology and conducting phylogenetic analyses of mitochondrial (CYTB) and nuclear (C-MOS) DNA sequence data from 49 individuals sampled across Amazonia. We detected remarkable variation in hemipenial morphology within this species, with multiple cases of sympatric occurrence of distinct hemipenial morphotypes. Phylogenetic analyses revealed highly divergent lineages corroborating the patterns suggested by the hemipenial morphotypes, including co-occurrence of different lineages. The degrees of genetic and morphological distinctness, as well as instances of sympatry among mtDNA lineages/morphotypes without nuDNA allele sharing, suggest that I. elegans is a complex of cryptic species. An extensive and integrative taxonomic revision of the I. elegans complex throughout its wide geographical range is needed.
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- 2012
15. From Amazonia to the Atlantic forest: Molecular phylogeny of Phyzelaphryninae frogs reveals unexpected diversity and a striking biogeographic pattern emphasizing conservation challenges
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Fouquet, Antoine, Loebmann, Daniel, Castroviejo-Fisher, Santiago, Padial, José, Orrico, Victor, Lyra, Mariana, Joventino Roberto, Igor, Kok, Philippe, Haddad, Célio, Trefaut Rodrigues, Miguel, Amphibian Evolution Lab, Biology, and Ecology and Systematics
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cryptic species ,Amazonia ,Neotropical diversity ,Phyzelaphryne ,Atlantic forest ,Adelophryne - Abstract
Documenting the Neotropical amphibian diversity has become a major challenge facing the threat of glo- bal climate change and the pace of environmental alteration. Recent molecular phylogenetic studies have revealed that the actual number of species in South American tropical forests is largely underestimated, but also that many lineages are millions of years old. The genera Phyzelaphryne (1 sp.) and Adelophryne (6 spp.), which compose the subfamily Phyzelaphryninae, include poorly documented, secretive, and min- ute frogs with an unusual distribution pattern that encompasses the biotic disjunction between Amazo- nia and the Atlantic forest. We generated >5.8 kb sequence data from six markers for all seven nominal species of the subfamily as well as for newly discovered populations in order to (1) test the monophyly of Phyzelaphryninae, Adelophryne and Phyzelaphryne, (2) estimate species diversity within the subfamily, and (3) investigate their historical biogeography and diversification. Phylogenetic reconstruction confirmed the monophyly of each group and revealed deep subdivisions within Adelophryne and Phyzel- aphryne, with three major clades in Adelophryne located in northern Amazonia, northern Atlantic forest and southern Atlantic forest. Our results suggest that the actual number of species in Phyzelaphryninae is, at least, twice the currently recognized species diversity, with almost every geographically isolated population representing an anciently divergent candidate species. Such results highlight the challenges for conservation, especially in the northern Atlantic forest where it is still degraded at a fast pace. Molec- ular dating revealed that Phyzelaphryninae originated in Amazonia and dispersed during early Miocene to the Atlantic forest. The two Atlantic forest clades of Adelophryne started to diversify some 7 Ma minimum, while the northern Amazonian Adelophryne diversified much earlier, some 13 Ma minimum. This striking biogeographic pattern coincides with major events that have shaped the face of the South American continent, as we know it today.
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- 2012
16. Extreme operative temperatures are better descriptors of the thermal environment than mean temperatures
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Camacho, Agustín, primary, Trefaut Rodrigues, Miguel, additional, and Navas, Carlos, additional
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- 2015
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17. High levels of diversity uncovered in a widespread nominal taxon : continental phylogeography of the Neotropical tree frog Dendropsophus minutus
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Gehara, Marcelo, Crawford, Andrew J., Orrico, Victor G. D., Rodríguez, Ariel, Lötters, Stefan, Fouquet, Antoine, Barrientos, Lucas S., Brusquetti, Francisco, De la Riva, Ignacio, Ernst, Raffael, Gagliardi Urrutia, Giuseppe, Glaw, Frank, Guayasamin, Juan M., Hölting, Monique, Jansen, Martin, Kok, Philippe J. R., Kwet, Axel, Lingnau, Rodrigo, Lyra, Mariana, Moravec, Jiří, Pombal Jr, José P., J. M. Rojas-Runjaic, Fernando, Schulze, Arne, Señaris, J. Celsa, Solé, Mirco, Trefaut Rodrigues, Miguel, Twomey, Evan, Haddad, Celio F. B., Vences, Miguel, Köhler, Jörn, Gehara, Marcelo, Crawford, Andrew J., Orrico, Victor G. D., Rodríguez, Ariel, Lötters, Stefan, Fouquet, Antoine, Barrientos, Lucas S., Brusquetti, Francisco, De la Riva, Ignacio, Ernst, Raffael, Gagliardi Urrutia, Giuseppe, Glaw, Frank, Guayasamin, Juan M., Hölting, Monique, Jansen, Martin, Kok, Philippe J. R., Kwet, Axel, Lingnau, Rodrigo, Lyra, Mariana, Moravec, Jiří, Pombal Jr, José P., J. M. Rojas-Runjaic, Fernando, Schulze, Arne, Señaris, J. Celsa, Solé, Mirco, Trefaut Rodrigues, Miguel, Twomey, Evan, Haddad, Celio F. B., Vences, Miguel, and Köhler, Jörn
- Abstract
Species distributed across vast continental areas and across major biomes provide unique model systems for studies of biotic diversification, yet also constitute daunting financial, logistic and political challenges for data collection across such regions. The tree frog Dendropsophus minutus (Anura: Hylidae) is a nominal species, continentally distributed in South America, that may represent a complex of multiple species, each with a more limited distribution. To understand the spatial pattern of molecular diversity throughout the range of this species complex, we obtained DNA sequence data from two mitochondrial genes, cytochrome oxidase I (COI) and the 16S rhibosomal gene (16S) for 407 samples of D. minutus and closely related species distributed across eleven countries, effectively comprising the entire range of the group. We performed phylogenetic and spatially explicit phylogeographic analyses to assess the genetic structure of lineages and infer ancestral areas. We found 43 statistically supported, deep mitochondrial lineages, several of which may represent currently unrecognized distinct species. One major clade, containing 25 divergent lineages, includes samples from the type locality of D. minutus. We defined that clade as the D. minutus complex. The remaining lineages together with the D. minutus complex constitute the D. minutus species group. Historical analyses support an Amazonian origin for the D. minutus species group with a subsequent dispersal to eastern Brazil where the D. minutus complex originated. According to our dataset, a total of eight mtDNA lineages have ranges >100,000 km2. One of them occupies an area of almost one million km2 encompassing multiple biomes. Our results, at a spatial scale and resolution unprecedented for a Neotropical vertebrate, confirm that widespread amphibian species occur in lowland South America, yet at the same time a large proportion of cryptic diversity still remains to be discovered.
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- 2014
18. Species delimitation, patterns of diversification and historical biogeography of the Neotropical frog genusAdenomera(Anura, Leptodactylidae)
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Fouquet, Antoine, primary, Santana Cassini, Carla, additional, Fernando Baptista Haddad, Célio, additional, Pech, Nicolas, additional, and Trefaut Rodrigues, Miguel, additional
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- 2013
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19. Does counting species count as taxonomy? On misrepresenting systematics, yet again
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de Carvalho, Marcelo R., primary, Ebach, Malte C., additional, Williams, David M., additional, Nihei, Silvio S., additional, Trefaut Rodrigues, Miguel, additional, Grant, Taran, additional, Silveira, Luís F., additional, Zaher, Hussam, additional, Gill, Anthony C., additional, Schelly, Robert C., additional, Sparks, John S., additional, Bockmann, Flávio A., additional, Séret, Bernard, additional, Ho, Hsuan‐Ching, additional, Grande, Lance, additional, Rieppel, Olivier, additional, Dubois, Alain, additional, Ohler, Annemarie, additional, Faivovich, Julián, additional, Assis, Leandro C. S., additional, Wheeler, Quentin D., additional, Goldstein, Paul Z., additional, de Almeida, Eduardo A. B., additional, Valdecasas, Antonio G., additional, and Nelson, Gareth, additional
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- 2013
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20. The Amazonian toad Rhaebo guttatus is able to voluntarily squirt poison from the paratoid macroglands
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Felipe Toledo, Luís, primary, Trefaut Rodrigues, Miguel, additional, Jared, Carlos, additional, Kruth Verdade, Vanessa, additional, and Maria Antoniazzi, Marta, additional
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- 2011
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21. Does counting species count as taxonomy? On misrepresenting systematics, yet again.
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Carvalho, Marcelo R., Ebach, Malte C., Williams, David M., Nihei, Silvio S., Trefaut Rodrigues, Miguel, Grant, Taran, Silveira, Luís F., Zaher, Hussam, Gill, Anthony C., Schelly, Robert C., Sparks, John S., Bockmann, Flávio A., Séret, Bernard, Ho, Hsuan‐Ching, Grande, Lance, Rieppel, Olivier, Dubois, Alain, Ohler, Annemarie, Faivovich, Julián, and Assis, Leandro C. S.
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BIOLOGICAL classification ,CLADISTIC analysis ,HOMOLOGY (Biology) ,BIOLOGICAL extinction ,TAXONOMISTS - Abstract
Recent commentary by Costello and collaborators on the current state of the global taxonomic enterprise attempts to demonstrate that taxonomy is not in decline as feared by taxonomists, but rather is increasing by virtue of the rate at which new species are formally named. Having supported their views with data that clearly indicate as much, Costello et al. make recommendations to increase the rate of new species descriptions even more. However, their views appear to rely on the perception of species as static and numerically if not historically equivalent entities whose value lie in their roles as 'metrics'. As such, their one-dimensional portrayal of the discipline, as concerned solely with the creation of new species names, fails to take into account both the conceptual and epistemological foundations of systematics. We refute the end-user view that taxonomy is on the rise simply because more new species are being described compared with earlier decades, and that, by implication, taxonomic practice is a formality whose pace can be streamlined without considerable resources, intellectual or otherwise. Rather, we defend the opposite viewpoint that professional taxonomy is in decline relative to the immediacy of the extinction crisis, and that this decline threatens not just the empirical science of phylogenetic systematics, but also the foundations of comparative biology on which other fields rely. The allocation of space in top-ranked journals to propagate views such as those of Costello et al. lends superficial credence to the unsupportive mindset of many of those in charge of the institutional fate of taxonomy. We emphasize that taxonomy and the description of new species are dependent upon, and only make sense in light of, empirically based classifications that reflect evolutionary history; homology assessments are at the centre of these endeavours, such that the biological sciences cannot afford to have professional taxonomists sacrifice the comparative and historical depth of their hypotheses in order to accelerate new species descriptions. [ABSTRACT FROM AUTHOR]
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- 2014
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22. Species delimitation, patterns of diversification and historical biogeography of the Neotropical frog genus Adenomera ( Anura, Leptodactylidae).
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Fouquet, Antoine, Santana Cassini, Carla, Fernando Baptista Haddad, Célio, Pech, Nicolas, Trefaut Rodrigues, Miguel, and Emerson, Brent
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SPECIES diversity ,BIOGEOGRAPHY ,FORESTS & forestry ,ANURA ,FROGS ,PHYLOGENY - Abstract
Aim For many taxa, inaccuracy of species boundaries and distributions hampers inferences about diversity and evolution. This is particularly true in the Neotropics where prevalence of cryptic species has often been demonstrated. The frog genus Adenomera is suspected to harbour many more species than the 16 currently recognized. These small terrestrial species occur in Amazonia, Atlantic Forest ( AF), and in the open formations of the Dry Diagonal ( DD: Chaco, Cerrado and Caatinga). This widespread and taxonomically complex taxon provides a good opportunity to (1) test species boundaries, and (2) investigate historical connectivity between Amazonia and the AF and associated patterns of diversification. Location Tropical South America east of the Andes. Methods We used molecular data (four loci) to estimate phylogenetic relationships among 320 Adenomera samples. These results were integrated with other lines of evidence to propose a conservative species delineation. We subsequently used an extended dataset (seven loci) and investigated ancestral area distributions, dispersal-vicariance events, and the temporal pattern of diversification within Adenomera. Results Our conservative delineation identified 31 Confirmed Candidate Species (four remaining unconfirmed) representing a 94% increase in species richness. The biogeographical analysis suggested an Amazonian origin of Adenomera with as many as three dispersals to the DD and one to the AF during the Miocene. These dispersals were associated with habitat shifts from forest towards open habitats. Main conclusions The DD played a major role in the history of Adenomera in limiting dispersal and favouring diversification of open-habitat lineages. Moreover, a forest bridge during the Miocene Climatic Optimum may have permitted dispersal from Amazonia towards the AF and subsequent diversification. Uncovering species boundaries and distributions might drastically change inferences based on currently perceived distribution patterns. [ABSTRACT FROM AUTHOR]
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- 2014
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23. The Amazonian toad Rhaebo guttatus is able to voluntarily squirt poison from the paratoid macroglands.
- Author
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Jared, Carlos, Maria Antoniazzi, Marta, Kruth Verdade, Vanessa, Felipe Toledo, Luís, and Trefaut Rodrigues, Miguel
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BUFONIDAE ,SALIVARY glands ,AMPHIBIAN populations ,DERMATOTOXICOLOGY ,DENDROBATIDAE ,DEFENSE mechanisms (Psychology) - Abstract
Amphibian defence mechanisms commonly rely on cutaneous toxins produced in either isolated or clustered glands, such as toad parotoid macroglands. In contrast to the passive mechanism of poison liberation in other amphibians, we discovered that the Amazonian toad Rhaebo guttatus is unique because it can voluntarily squirt jets of poison from its parotoids. [ABSTRACT FROM AUTHOR]
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- 2011
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24. Répteis da Estação Ecológica Serra Geral do Tocantins, Brasil Central.
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Sousa Recoder, Renato, Teixeira Junior, Mauro, Camacho, Agustín, Sales Nunes, Pedro Murilo, Mott, Tamí, Valdujo, Paula Hanna, Ghellere, José Mario, Nogueira, Cristiano, and Trefaut Rodrigues, Miguel
- Abstract
Copyright of Biota Neotropica is the property of Biota Neotropica and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2011
- Full Text
- View/download PDF
25. Vertebrados da Estação Ecológica Serra Geral do Tocantins: faunística, biodiversidade e conservação no Cerrado brasileiro.
- Author
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de Campos Nogueira, Cristiano, Napolitano e. Ferreira, Mariana, Sousa Recoder, Renato, Carmignotto, Ana Paula, Valdujo, Paula Hanna, Thadeo de Lima, Flávio César, Gregorin, Renato, Fábio Silveira, Luís, and Trefaut Rodrigues, Miguel
- Abstract
Copyright of Biota Neotropica is the property of Biota Neotropica and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2011
- Full Text
- View/download PDF
26. Anfíbios da Estação Ecológica Serra Geral do Tocantins, região do Jalapão, Estados do Tocantins e Bahia.
- Author
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Valdujo, Paula Hanna, Camacho, Agustín, Recoder, Renato Sousa, Teixeira Junior, Mauro, Beloti Ghellere, José Mário, Mott, Tami, Sales Nunes, Pedro Murilo, Nogueira, Cristiano, and Trefaut Rodrigues, Miguel
- Abstract
Copyright of Biota Neotropica is the property of Biota Neotropica and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2011
- Full Text
- View/download PDF
27. Brazil’s government attacks biodiversity.
- Author
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Alicino Bockmann, Flávio, Trefaut Rodrigues, Miguel, Kohsldorf, Tiana, Cobra Straker, Lorian, Grant, Taran, Cardoso de Pinna, Mário César, Luis Medina Mantelatto, Fernando, Datovo, Aléssio, Perez Pombal, José Jr., Campbell McNamara, John, Botelho de Almeida, Eduardo Andrade, Klein, Wilfried, Schmaltz Hsiou, Annie, Groppo, Milton, Macedo Corrêae Castro, Ricardo, and de Souza Amorim, Dalton
- Subjects
- *
ENVIRONMENTAL policy , *ENVIRONMENTAL protection , *BIODIVERSITY policy - Published
- 2018
28. On the snake Siphlophis worontzowi (Prado, 1940): notes on its distribution, diet and morphological data.
- Author
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Dal Vechio, Francisco, Teixeira Junior, Mauro, Neto, Antonio Mollo, and Trefaut Rodrigues, Miguel
- Subjects
- *
SNAKES , *MORPHOMETRICS - Abstract
We provide geographic data for the poorly known dipsadid Siphlophis worontzowi including the first records to the Tocantins state and on the left bank of Madeira River at Rondônia State. Our data also extend its distribution on Mato Grosso State. We also provide new morphometric, meristic and ecological data to the knowledge of this species. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
29. Does counting species count as taxonomy? On misrepresenting systematics, yet again.
- Author
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de Carvalho MR, Ebach MC, Williams DM, Nihei SS, Trefaut Rodrigues M, Grant T, Silveira LF, Zaher H, Gill AC, Schelly RC, Sparks JS, Bockmann FA, Séret B, Ho HC, Grande L, Rieppel O, Dubois A, Ohler A, Faivovich J, Assis LCS, Wheeler QD, Goldstein PZ, de Almeida EAB, Valdecasas AG, and Nelson G
- Abstract
Recent commentary by Costello and collaborators on the current state of the global taxonomic enterprise attempts to demonstrate that taxonomy is not in decline as feared by taxonomists, but rather is increasing by virtue of the rate at which new species are formally named. Having supported their views with data that clearly indicate as much, Costello et al. make recommendations to increase the rate of new species descriptions even more. However, their views appear to rely on the perception of species as static and numerically if not historically equivalent entities whose value lie in their roles as "metrics". As such, their one-dimensional portrayal of the discipline, as concerned solely with the creation of new species names, fails to take into account both the conceptual and epistemological foundations of systematics. We refute the end-user view that taxonomy is on the rise simply because more new species are being described compared with earlier decades, and that, by implication, taxonomic practice is a formality whose pace can be streamlined without considerable resources, intellectual or otherwise. Rather, we defend the opposite viewpoint that professional taxonomy is in decline relative to the immediacy of the extinction crisis, and that this decline threatens not just the empirical science of phylogenetic systematics, but also the foundations of comparative biology on which other fields rely. The allocation of space in top-ranked journals to propagate views such as those of Costello et al. lends superficial credence to the unsupportive mindset of many of those in charge of the institutional fate of taxonomy. We emphasize that taxonomy and the description of new species are dependent upon, and only make sense in light of, empirically based classifications that reflect evolutionary history; homology assessments are at the centre of these endeavours, such that the biological sciences cannot afford to have professional taxonomists sacrifice the comparative and historical depth of their hypotheses in order to accelerate new species descriptions., (© The Willi Hennig Society 2013.)
- Published
- 2014
- Full Text
- View/download PDF
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