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Physicians work at a very tight schedule and need decision-making support tools to help on improving and doing their work in a timely and dependable manner. Examining piles of sheets with test results and using systems with little visualization support to provide diagnostics is daunting, but that is still the usual way for the physicians' daily procedure, especially in developing countries. Electronic Health Records systems have been designed to keep the patients' history and reduce the time spent analyzing the patient's data. However, better tools to support decision-making are still needed. In this paper, we propose ClinicalPath, a visualization tool for users to track a patient's clinical path through a series of tests and data, which can aid in treatments and diagnoses. Our proposal is focused on patient's data analysis, presenting the test results and clinical history longitudinally. Both the visualization design and the system functionality were developed in close collaboration with experts in the medical domain to ensure a right fit of the technical solutions and the real needs of the professionals. We validated the proposed visualization based on case studies and user assessments through tasks based on the physician's daily activities. Our results show that our proposed system improves the physicians' experience in decision-making tasks, made with more confidence and better usage of the physicians' time, allowing them to take other needed care for the patients., Comment: 14 pages and 8 figures

Lack of data and data quality issues are among the main bottlenecks that prevent further artificial intelligence adoption within many organizations, pushing data scientists to spend most of their time cleaning data before being able to answer analytical questions. Hence, there is a need for more effective and efficient data cleaning solutions, which, not surprisingly, is rife with theoretical and engineering problems. This report addresses the problem of performing holistic data cleaning incrementally, given a fixed rule set and an evolving categorical relational dataset acquired in sequential batches. To the best of our knowledge, our contributions compose the first incremental framework that cleans data (i) independently of user interventions, (ii) without requiring knowledge about the incoming dataset, such as the number of classes per attribute, and (iii) holistically, enabling multiple error types to be repaired simultaneously, and thus avoiding conflicting repairs. Extensive experiments show that our approach outperforms the competitors with respect to repair quality, execution time, and memory consumption., Comment: 29 pages, 13 figures

Background. The image-based identification of distinct tissues within dermatological wounds enhances patients' care since it requires no intrusive evaluations. This manuscript presents an approach, we named QTDU, that combines deep learning models with superpixel-driven segmentation methods for assessing the quality of tissues from dermatological ulcers. Method. QTDU consists of a three-stage pipeline for the obtaining of ulcer segmentation, tissues' labeling, and wounded area quantification. We set up our approach by using a real and annotated set of dermatological ulcers for training several deep learning models to the identification of ulcered superpixels. Results. Empirical evaluations on 179,572 superpixels divided into four classes showed QTDU accurately spot wounded tissues (AUC = 0.986, sensitivity = 0.97, and specificity = 0.974) and outperformed machine-learning approaches in up to 8.2% regarding F1-Score through fine-tuning of a ResNet-based model. Last, but not least, experimental evaluations also showed QTDU correctly quantified wounded tissue areas within a 0.089 Mean Absolute Error ratio. Conclusions. Results indicate QTDU effectiveness for both tissue segmentation and wounded area quantification tasks. When compared to existing machine-learning approaches, the combination of superpixels and deep learning models outperformed the competitors within strong significant levels.

Segmentation of medical images is critical for making several processes of analysis and classification more reliable. With the growing number of people presenting back pain and related problems, the semi-automatic segmentation and 3D reconstruction of vertebral bodies became even more important to support decision making. A 3D reconstruction allows a fast and objective analysis of each vertebrae condition, which may play a major role in surgical planning and evaluation of suitable treatments. In this paper, we propose 3DBGrowth, which develops a 3D reconstruction over the efficient Balanced Growth method for 2D images. We also take advantage of the slope coefficient from the annotation time to reduce the total number of annotated slices, reducing the time spent on manual annotation. We show experimental results on a representative dataset with 17 MRI exams demonstrating that our approach significantly outperforms the competitors and, on average, only 37% of the total slices with vertebral body content must be annotated without losing performance/accuracy. Compared to the state-of-the-art methods, we have achieved a Dice Score gain of over 5% with comparable processing time. Moreover, 3DBGrowth works well with imprecise seed points, which reduces the time spent on manual annotation by the specialist., Comment: This is a pre-print of an article published in Computer-Based Medical Systems. The final authenticated version is available online at: https://doi.org/10.1109/CBMS.2019.00091

Complex networks are nowadays employed in several applications. Modeling urban street networks is one of them, and in particular to analyze criminal aspects of a city. Several research groups have focused on such application, but until now, there is a lack of a well-defined methodology for employing complex networks in a whole crime analysis process, i.e. from data preparation to a deep analysis of criminal communities. Furthermore, the "toolset" available for those works is not complete enough, also lacking techniques to maintain up-to-date, complete crime datasets and proper assessment measures. In this sense, we propose a threefold methodology for employing complex networks in the detection of highly criminal areas within a city. Our methodology comprises three tasks: (i) Mapping of Urban Crimes; (ii) Criminal Community Identification; and (iii) Crime Analysis. Moreover, it provides a proper set of assessment measures for analyzing intrinsic criminality of communities, especially when considering different crime types. We show our methodology by applying it to a real crime dataset from the city of San Francisco - CA, USA. The results confirm its effectiveness to identify and analyze high criminality areas within a city. Hence, our contributions provide a basis for further developments on complex networks applied to crime analysis., Comment: 7 pages, 2 figures, 14th International Conference on Information Technology : New Generations

Social media could provide valuable information to support decision making in crisis management, such as in accidents, explosions and fires. However, much of the data from social media are images, which are uploaded in a rate that makes it impossible for human beings to analyze them. Despite the many works on image analysis, there are no fire detection studies on social media. To fill this gap, we propose the use and evaluation of a broad set of content-based image retrieval and classification techniques for fire detection. Our main contributions are: (i) the development of the Fast-Fire Detection method (FFDnR), which combines feature extractor and evaluation functions to support instance-based learning, (ii) the construction of an annotated set of images with ground-truth depicting fire occurrences -- the FlickrFire dataset, and (iii) the evaluation of 36 efficient image descriptors for fire detection. Using real data from Flickr, our results showed that FFDnR was able to achieve a precision for fire detection comparable to that of human annotators. Therefore, our work shall provide a solid basis for further developments on monitoring images from social media., Comment: 12 pages, Proceedings of the International Conference on Enterprise Information Systems. Specifically: Marcos Bedo, Gustavo Blanco, Willian Oliveira, Mirela Cazzolato, Alceu Costa, Jose Rodrigues, Agma Traina, Caetano Traina, 2015, Techniques for effective and efficient fire detection from social media images, ICEIS, 34-45

This paper presents an analytical taxonomy that can suitably describe, rather than simply classify, techniques for data presentation. Unlike previous works, we do not consider particular aspects of visualization techniques, but their mechanisms and foundational vision perception. Instead of just adjusting visualization research to a classification system, our aim is to better understand its process. For doing so, we depart from elementary concepts to reach a model that can describe how visualization techniques work and how they convey meaning., Comment: Published in the Proceedings of the Information Visualization Conference as Jose Rodrigues, Agma Traina, Maria Oliveira, Caetano Traina, Reviewing Data Visualization: an Analytical Taxonomical Study In: 10th International Conference on Information Visualization, 2006, 713-720 IEEE Press

We revisit the design space of visualizations aiming at identifying and relating its components. In this sense, we establish a model to examine the process through which visualizations become expressive for users. This model has leaded us to a taxonomy oriented to the human visual perception, a conceptualization that provides natural criteria in order to delineate a novel understanding for the visualization design space. The new organization of concepts that we introduce is our main contribution: a grammar for the visualization design based on the review of former works and of classical and state-of-the-art techniques. Like so, the paper is presented as a survey whose structure introduces a new conceptualization for the space of techniques concerning visual analysis.

Current applications have produced graphs on the order of hundreds of thousands of nodes and millions of edges. To take advantage of such graphs, one must be able to find patterns, outliers and communities. These tasks are better performed in an interactive environment, where human expertise can guide the process. For large graphs, though, there are some challenges: the excessive processing requirements are prohibitive, and drawing hundred-thousand nodes results in cluttered images hard to comprehend. To cope with these problems, we propose an innovative framework suited for any kind of tree-like graph visual design. GMine integrates (a) a representation for graphs organized as hierarchies of partitions - the concepts of SuperGraph and Graph-Tree; and (b) a graph summarization methodology - CEPS. Our graph representation deals with the problem of tracing the connection aspects of a graph hierarchy with sub linear complexity, allowing one to grasp the neighborhood of a single node or of a group of nodes in a single click. As a proof of concept, the visual environment of GMine is instantiated as a system in which large graphs can be investigated globally and locally.