66 results on '"Toshiya Yamada"'
Search Results
2. Visualization of Remote Touch Panel for Dialysis Patient on Prototype Bed.
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Yuki Takeda, Daichi Yokoyama, Noboru Nakamichi, Rieko Inaba, Keita Watanabe, and Toshiya Yamada
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- 2020
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3. Pointing-gestures' Angle Differences between a Standing posture and a Sitting posture.
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Daichi Yokoyama, Nobuhiko Hama, Noboru Nakamichi, Keiya Sugihara, Keita Watanabe, and Toshiya Yamada
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- 2018
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4. Differences of pointing gestures between a standing posture and a sitting posture.
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Keiya Sugihara, Kenta Amahaya, Keita Watanabe, Noboru Nakamichi, and Toshiya Yamada
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- 2016
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5. Spotlighting for guiding to articles on display.
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Kenta Amahaya, Ryuuji Kittaka, Keita Watanabe, Noboru Nakamichi, and Toshiya Yamada
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- 2015
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6. Remote Touch Pointing for Smart TV Interaction.
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Keita Watanabe, Yuta Miyake, Noboru Nakamichi, Toshiya Yamada, and Takashi Ozeki
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- 2014
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7. Extraction of User Interaction Patterns for Low-Usability Web Pages.
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Toshiya Yamada, Noboru Nakamichi, and Tomoko Matsui
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- 2011
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8. Who cares?: reflecting who is reading what on distributed community bulletin boards.
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Toshiya Yamada, Jun Shingu, Elizabeth F. Churchill, Les Nelson, Jonathan Helfman, and Paul Murphy 0002
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- 2004
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- View/download PDF
9. Visualization of Remote Touch Panel for Dialysis Patient on Prototype Bed
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Daichi Yokoyama, Yuki Takeda, Keita Watanabe, Toshiya Yamada, Noboru Nakamichi, and Rieko Inaba
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Remote touch ,business.industry ,Computer science ,Position (vector) ,Line (geometry) ,Touch panel ,Projection mapping ,Computer vision ,Artificial intelligence ,Ceiling (cloud) ,business ,White line ,Visualization - Abstract
Work environment is required for patients in artificial dialysis. We have developed a prototype bed with a ceiling display and non-contact operation function. Virtual touch panel of non-contact operation function using Remote Touch Panel is not visualized. We propose the virtual touch panel visualized by shapes and colors of projection mapping. From the experimental results, the most selected shape pattern is "White Line and Blue Space" with "Back" decision. It is considered that the "Line" has a role as a decision position. And the "Space" has a role to feedback that it has approached the decision position.
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- 2020
10. Serial sampling bridges a gap between ecological and genetical definitions of immigrant: an empirical test in a grey-sided vole population
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Takashi Saitoh and Toshiya Yamada
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education.field_of_study ,biology ,Ecology ,Population ,biology.organism_classification ,Test (assessment) ,Geography ,Empirical research ,Animal ecology ,Sampling design ,Biological dispersal ,Animal Science and Zoology ,Vole ,education ,Allele frequency ,Ecology, Evolution, Behavior and Systematics - Abstract
The assignment test is believed to have the potential to estimate the contemporary rate of immigration and is considered as an alternative to ecological methods (e.g., mark-recapture and radio/GPS tracking). However, the conventional assignment test provides different results from those of the mark-recapture method, when it is applied to populations with low genetic differentiation from one another. The difference derives from a difference in the definition of “immigrant”; immigrants in the mark-recapture method are individuals coming from outside a predefined population, whereas immigrants in the assignment test are individuals coming from other genetically differentiated populations. We propose a sampling design of the assignment test bridging a gap between the ecological and genetical definition of immigrant. The assignment test application based on this design identifies immigrants referring to the allele frequency of a focal population before dispersal occurs. We tested the efficiency of the proposed sampling design by comparing immigration rates estimated by the assignment test with those from mark-recapture records of a grey-sided vole (Myodes rufocanus) population, which was not significantly genetically differentiated from the surrounding populations. The proposed design provided 7–30% closer results to those from the mark-recapture in accuracy, in comparison with results from the conventional assignment test, and in the detection power 23–54% improvement was observed. The serial sampling for the assignment test could bridge the differences between ecological methods and the assignment test.
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- 2018
11. Pointing-gestures' Angle Differences between a Standing posture and a Sitting posture
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Keita Watanabe, Nobuhiko Hama, Keiya Sugihara, Daichi Yokoyama, Noboru Nakamichi, and Toshiya Yamada
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Computer science ,business.industry ,Natural user interface ,Sitting posture ,Computer vision ,Artificial intelligence ,Sitting ,business ,Gesture - Abstract
We analyze differences of pointing-gestures between standing and sitting postures. We focused the gestures' angle from a relation between the pointing location on the screen and pointing-gestures. Pointing-gestures of a standing posture and a sitting posture were recorded. As an experimental result, angular difference between standing posture and sitting posture is about 7.3 degree. From the result, the relative difference is considered to be influenced by topand-bottom angle of gesture in pointing tiles on the screen. However, gestures' angle differences are not only posture but also other factors. Firstly, we discuss about combination of a base point and an operating point as one of other factors. Secondly, we discuss about selected gesture between upward gestures' angle and downward gestures' angle. As the analysis result, the relative difference is considered to be influenced by top-and-bottom angle of gesture in pointing tiles on the screen.
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- 2018
12. Temporal change in the spatial genetic structure of a sika deer population with an expanding distribution range over a 15-year period
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Chisato Terada, Koichi Kaji, Satomi Takekawa, Hiroyuki Uno, Takashi Saitoh, Toshiya Yamada, Ryuichi Masuda, Wei Ou, and Junco Nagata
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Mitochondrial DNA ,education.field_of_study ,Cervus ,Range (biology) ,Ecology ,Population ,Biology ,biology.organism_classification ,Gene flow ,Evolutionary biology ,Genetic structure ,Microsatellite ,Biological dispersal ,education ,Ecology, Evolution, Behavior and Systematics - Abstract
Since the 1980s, the sika deer (Cervus nippon Temminck, 1838) population of Hokkaido, Japan, has grown, resulting in range expansion. To assess the effects of this range expansion on the spatial genetic structure of the population, we compared subpopulation structures during 2 different periods (168 samples for 1991–1996, and 169 samples for 2008–2010), using mitochondrial DNA (mtDNA; D-loop) and microsatellites (9 loci). The number of gene-based subpopulations decreased across the 15-year period; specifically from four to three subpopulations based on mtDNA, and from two to one subpopulation based on microsatellite DNA. The fusion of the two northern subpopulations caused the change to the mtDNA-based structure, which might be explained by the dispersal of females from higher to lower density subpopulations. In comparison, the reason for the change in the microsatellite DNA-based structure was unclear, because no significant genetic differentiation was observed between the two study periods. A stable mtDNA-based structure was maintained in the north and central population separated by a west-to-east boundary, while a north-to-south boundary in eastern Hokkaido maintained stability in the eastern subpopulation versus all other subpopulations. The findings of this study demonstrate the importance of understanding gene flow within a structured population to implement effective management efforts; for instance, the culling of one subpopulation might not affect an adjacent subpopulation, because deer movement is limited between the subpopulations.
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- 2013
13. New mtDNA Haplotypes of the Sika Deer (Cervus nippon) Found in Hokkaido, Japan Suggest Human-Mediated Immigration
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Toshiya Yamada, Hiroyuki Uno, Chisato Terada, and Takashi Saitoh
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education.field_of_study ,Cervus ,biology ,Range (biology) ,Population ,Genetic pollution ,Zoology ,Introduced species ,biology.organism_classification ,Population decline ,Geography ,Local extinction ,Animal Science and Zoology ,Conservation biology ,education - Abstract
The sika deer (Cervus nippon Temminck, 1838) is widely distributed throughout eastern and northeastern Asia, from the Ussuri region of Siberia to northern Vietnam, Taiwan, and Japan (Ohtaishi 1986; Whitehead 1993), with the range extending from subarctic to tropical zones. Because of their high hunting value (e.g., beauty and taste), they have been introduced into at least 18 countries: Australia, Austria, the Czech Republic, Denmark, England, Estonia, France, Germany, Hungary, Ireland, Lithuania, Moldova, Morocco, New Zealand, the Philippines, Poland, Switzerland, and the United States (Pitra et al. 2005; Bartos 2009; Ohdachi et al. 2009). Although they have been highly valued as hunting animals, sika deer have also caused ecological problems in some introduced regions, including serious damage to the forests of British islands (Bartos 2009; Swanson and Putman 2009) and hybridization with native red deer (Cervus elaphus Linnaeus, 1758) in Europe (Whitehead 1972; Bartos 2009; Senn and Pemberton 2009). Such hybridization that introduces genetic pollution of native species poses a serious concern for conservation biology. Phylogenetic studies on Japanese sika deer show two distinct phylogroups: Northern and Southern lineages (Tamate et al. 1998; Nagata et al. 1999; Nagata 2009), which are thought to have diverged approximately 350,000 years ago. The genetic difference between these two groups is larger than the differences between sika deer in the Asian Continent and each lineage in Japan (Nagata 2009). Although hybridization within species may not be of serious concern, hybridization between deeply diverged lineages may ultimately reduce genetic diversity and cause genetic pollution. Relocation of the sika deer between the lineages should therefore be avoided. The Oshima region, the southernmost peninsula in Hokkaido, was the native habitat of sika deer until the 1870s. Drastic population decline due to overharvesting and heavy snow, however, brought on a local extinction of sika deer in the Oshima region. In order to restore the population for game hunting, administrative reintroductions were conducted (Kaji et al. 2000, 2010), in which six females and two males, and six females and three males from the eastern part of Hokkaido were released into the Oshima region in 1980 and in 1981, respectively. The most common mtDNA haplotype in the eastern part of Hokkaido was observed in individuals that were sampled in the 1990s and 2000s from the Oshima region (Nabata et al. 2007). Moreover, another unofficial introduction of sika deer of unknown origin has been suspected in the Oshima region; a hunter’s community has suggested that some deer might escape from captive bred sites which were privately managed. Therefore, we may find individuals that have different lineages from native one. In this study, we examined the mitochondrial DNA (mtDNA) haplotype composition of the sika deer population in the Oshima region to resolve the origin of sika deer in the region.
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- 2013
14. Differences of pointing gestures between a standing posture and a sitting posture
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Toshiya Yamada, Kenta Amahaya, Keiya Sugihara, Keita Watanabe, and Noboru Nakamichi
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Point (typography) ,business.industry ,Computer science ,Sitting posture ,Computer vision ,Artificial intelligence ,business ,Gesture - Abstract
Pointing gestures are an area of active research. Pointing methods were proposed in a standing posture or a sitting posture. Proposed methods in each posture have a potential to apply in different posture. However, it wasn't cleared that a gesture can apply in a different posture. We analyze difference of pointing gestures between a standing posture and a sitting posture. In the experiment, we used a pointing gesture which sets on a base point and an operating point as a part of a body. It points out objective area using the extended line of them. From experimental result, the difference in the gestures by postures were analyzed, 38% of participants were a different gesture. We consider personalization is necessary by the applied location and posture. However, we discovered individual difference of THUMB RIGHT position from pictures of participant's behavior. The 2nd gesture selected by participants were HEAD x HAND TIP RIGHT. The gesture is not varied much from person to person and suited for common setting.
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- 2016
15. Mo1172 Multicenter Retrospective Study of Photodynamic Therapy for Gastric Cancer
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Tetsuo Nakayama, Yoshiro Nishiwaki, Hiroto Tanaka, Masafumi Mizuide, Motoyasu Kusano, Hiroko Hosaka, Osamu Kawamura, Taku Tomizawa, Satoru Kakizaki, Yasumori Fukai, Yasuyuki Shimoyama, Shiko Kuribayashi, Koki Hoshi, and Toshiya Yamada
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Oncology ,medicine.medical_specialty ,business.industry ,medicine.medical_treatment ,Internal medicine ,Gastroenterology ,Medicine ,Cancer ,Radiology, Nuclear Medicine and imaging ,Retrospective cohort study ,Photodynamic therapy ,business ,medicine.disease - Published
- 2017
16. Combination Assessment of Esophago-Gastric Junction Morphology and Gastroesophageal Flap Valve for Evaluating the Occurrence of Transient Lower Esophageal Sphincter Relaxation and Patient Symptoms
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Toshiya Yamada, Hiroko Hosaka, Satoru Kakizaki, Hirohito Tanaka, Tetsuo Nakayama, Koki Hoshi, Yasumori Fukai, Taku Tomizawa, Fumihiko Nakamura, Junichi Akiyama, Shiko Kuribayashi, Osamu Kawamura, Masafumi Mizuide, Akiyo Kawada, and Motoyasu Kusano
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Flap valve ,medicine.medical_specialty ,Hepatology ,business.industry ,Gastroenterology ,Esophageal sphincter ,Medicine ,Relaxation (physics) ,Transient (oscillation) ,Esophago gastric junction ,business ,Surgery - Published
- 2017
17. A case of small-intestine bleeding during sunitinib administration
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Shiko Kuribayashi, Koki Hoshi, Emi Irie, Motoyasu Kusano, Satoru Kakizaki, Hirohito Tanaka, Masahumi Mizuide, Toshiya Yamada, Tetsuo Nakayama, Osamu Kawamura, Yasuyuki Shimoyama, Yasumori Fukai, and Taku Tomizawa
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0301 basic medicine ,medicine.medical_specialty ,business.industry ,Sunitinib ,Mechanical Engineering ,Energy Engineering and Power Technology ,Management Science and Operations Research ,Gastroenterology ,Small intestine ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Internal medicine ,Medicine ,business ,Administration (government) ,medicine.drug - Published
- 2017
18. Sa1238 RETOSPECTIVE MULTICENTER STUDY OF PHOTODYNAMIC THERAPY FOR GASTRIC CANCER
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Hiroto Tanaka, Hiroko Hosaka, Yasuyuki Shimoyama, Toshiya Yamada, Shiko Kuribayashi, Osamu Kawamura, Taku Tomizawa, Koki Hoshi, Tetsuo Nakayama, Motoyasu Kusano, and Yoshiro Nishiwaki
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Oncology ,medicine.medical_specialty ,Multicenter study ,business.industry ,medicine.medical_treatment ,Internal medicine ,Gastroenterology ,Medicine ,Cancer ,Radiology, Nuclear Medicine and imaging ,Photodynamic therapy ,business ,medicine.disease - Published
- 2018
19. Present situation of emergent ERCP in our hospital and Analysis of the five items to diagnose medium acute cholangitis
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Jun Masuda, Satoru Kakizaki, Motoyasu Kusano, Masashi Ijima, Masafumi Mizuide, Hideki Maruyama, Toshiya Yamada, Tsutomu Kobatake, Hiroyuki Tsuchida, and Yoshiki Tanaka
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medicine.medical_specialty ,Pediatrics ,business.industry ,Mechanical Engineering ,General surgery ,Energy Engineering and Power Technology ,Medicine ,Management Science and Operations Research ,business - Published
- 2008
20. Spotlighting for guiding to articles on display
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Keita Watanabe, Toshiya Yamada, Noboru Nakamichi, Ryuuji Kittaka, and Kenta Amahaya
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Point (typography) ,business.industry ,Computer science ,Movement (music) ,Interface (computing) ,Control (management) ,Spotlighting ,Feature (machine learning) ,Computer vision ,Artificial intelligence ,Object (computer science) ,business ,Gesture - Abstract
Pointing gestures are used for sharing recognition to an object. Users would like to point out an object intuitively. We propose spotlighting system named Spotlighting for displaying a focus area. It consists of a pointing system by pointing gesture and an operation interface of focus area. A user can control movement of focus area position by moving your one hand with holding it and you can fix focus area on pointing position by opening up your hand. A user can point out in whole or in part of an object by using the proposal system. Therefore Users can share cognitive object with other people easily by using it. We experimented at an actual museum to confirm the effect of the spotlighting. We had a questionnaire about the feature compared with other methods. All the visitors answered "easy to understand" and "Relatively easy to understand" by using spotlighting.
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- 2015
21. PlexinA4 is necessary as a downstream target of Islet2 to mediate Slit signaling for promotion of sensory axon branching
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Melissa H. Little, Hiroshi Segawa, Yoshikazu Hirate, Naoki Takahashi, Toshiya Yamada, Hitoshi Okamoto, Toshio Miyashita, Sang-Yeob Yeo, and Hironori Wada
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animal structures ,Morpholino ,Recombinant Fusion Proteins ,LIM-Homeodomain Proteins ,Molecular Sequence Data ,Nerve Tissue Proteins ,Receptors, Cell Surface ,Sensory system ,Biology ,Animals, Genetically Modified ,Semaphorin ,SLIT2 ,Animals ,Neurons, Afferent ,Growth cone ,Molecular Biology ,Zebrafish ,In Situ Hybridization ,Phylogeny ,Homeodomain Proteins ,Brain ,Oligonucleotides, Antisense ,Zebrafish Proteins ,biology.organism_classification ,Slit ,Axons ,Cell biology ,nervous system ,embryonic structures ,Intercellular Signaling Peptides and Proteins ,Signal transduction ,Signal Transduction ,Transcription Factors ,Developmental Biology - Abstract
Slit is a secreted protein known to repulse the growth cones of commissural neurons. By contrast, Slit also promotes elongation and branching of axons of sensory neurons. The reason why different neurons respond to Slit in different ways is largely unknown. Islet2 is a LIM/homeodomain-type transcription factor that specifically regulates elongation and branching of the peripheral axons of the primary sensory neurons in zebrafish embryos. We found that PlexinA4, a transmembrane protein known to be a co-receptor for class III semaphorins,acts downstream of Islet2 to promote branching of the peripheral axons of the primary sensory neurons. Intriguingly, repression of PlexinA4 function by injection of the antisense morpholino oligonucleotide specific to PlexinA4 or by overexpression of the dominant-negative variant of PlexinA4 counteracted the effects of overexpression of Slit2 to induce branching of the peripheral axons of the primary sensory neurons in zebrafish embryos, suggesting involvement of PlexinA4 in the Slit signaling cascades for promotion of axonal branching of the sensory neurons. Colocalized expression of Robo, a receptor for Slit2, and PlexinA4 is observed not only in the primary sensory neurons of zebrafish embryos but also in the dendrites of the pyramidal neurons of the cortex of the mammals, and may be important for promoting the branching of either axons or dendrites in response to Slit, as opposed to the growth cone collapse.
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- 2004
22. Involvement of Islet-2 in the Slit signaling for axonal branching and defasciculation of the sensory neurons in embryonic zebrafish
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Hitoshi Okamoto, Toshiya Yamada, Sang-Yeob Yeo, Cornelia Fricke, Toshio Miyashita, Melissa H. Little, Tae Lin Huh, John Y. Kuwada, and Chi Bin Chien
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Nervous system ,Embryology ,Recombinant Fusion Proteins ,LIM-Homeodomain Proteins ,Nerve Tissue Proteins ,Animals, Genetically Modified ,Mauthner cell ,Genes, Reporter ,SLIT2 ,medicine ,Animals ,Neurons, Afferent ,RNA, Messenger ,Receptors, Immunologic ,Growth cone ,Zebrafish ,Glycoproteins ,Homeodomain Proteins ,biology ,Anatomy ,Zebrafish Proteins ,biology.organism_classification ,Slit ,Axons ,Cell biology ,medicine.anatomical_structure ,Trigeminal Ganglion ,nervous system ,Sensory Ganglion ,Axon guidance ,sense organs ,Signal Transduction ,Transcription Factors ,Developmental Biology - Abstract
In Drosophila melanogaster, Slit acts as a repulsive cue for the growth cones of the commissural axons which express a receptor for Slit, Roundabout (Robo), thus preventing the commissural axons from crossing the midline multiple times. Experiments using explant culture have shown that vertebrate Slit homologues also act repulsively for growth cone navigation and neural migration, and promote branching and elongation of sensory axons. Here, we demonstrate that overexpression of Slit2 in vivo in transgenic zebrafish embryos severely affected the behavior of the commissural reticulospinal neurons (Mauthner neurons), promoted branching of the peripheral axons of the trigeminal sensory ganglion neurons, and induced defasciculation of the medial longitudinal fascicles. In addition, Slit2 overexpression caused defasciculation and deflection of the central axons of the trigeminal sensory ganglion neurons from the hindbrain entry point. The central projection was restored by either functional repression or mutation of Robo2, supporting its role as a receptor mediating the Slit signaling in vertebrate neurons. Furthermore, we demonstrated that Islet-2, a LIM/homeodomain-type transcription factor, is essential for Slit2 to induce axonal branching of the trigeminal sensory ganglion neurons, suggesting that factors functioning downstream of Islet-2 are essential for mediating the Slit signaling for promotion of axonal branching.
- Published
- 2004
- Full Text
- View/download PDF
23. In ovo electroporation ofCrim1 in the developing chick spinal cord
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Melissa H. Little, Toshiya Yamada, Gabriel Kolle, and Annemieke Jansen
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Central Nervous System ,Nervous system ,animal structures ,Chick Embryo ,Biology ,Mice ,Notochord ,medicine ,Animals ,Humans ,Cloning, Molecular ,Sonic hedgehog ,Caenorhabditis elegans ,Floor plate ,Motor Neurons ,Neurons ,Neural tube ,Membrane Proteins ,Nuclear Proteins ,Proteins ,Bone Morphogenetic Protein Receptors ,Immunohistochemistry ,Molecular biology ,Protein Structure, Tertiary ,Electroporation ,medicine.anatomical_structure ,Spinal Cord ,Ectodomain ,Bone morphogenetic protein 4 ,Neural Crest ,embryonic structures ,biology.protein ,Chordin ,Developmental Biology - Abstract
The novel mammalian gene Crim1 encodes a transmembrane bound protein with similarity to the secreted bone morphogenetic protein (BMP) antagonists, vertebrate Chordin, and its Drosophila homologue short gastrulation. Crim1 is expressed in the neural tube in mouse in a restricted pattern, but its function in central nervous system development is largely unknown. We isolated the chicken Crim1 orthologue and analyzed its expression in the developing neural tube. Chicken CRIM1 shares strong homology to human/mouse CRIM1 and C. elegans CRIM1-like proteins. Crim1 is expressed in a similar but not identical pattern to that in the developing spinal cord of mouse, including the notochord, floor plate, motor neurons, and the roof plate. Unlike follistatin, a secreted inhibitor of BMPs, in ovo electroporation of CRIM1, as a full-length transmembrane bound or secreted ectodomain was not sufficient to disrupt early patterning of the neural tube. However, ectodomain CRIM1 overexpression leads to an approximate 50% decrease in populations of specific ventral neuronal populations, including ISL-1(+) motor neurons, CHX-10(+) V1, and EN-1(+) V2 interneurons.
- Published
- 2002
24. Coexpression of SCL and GATA3 in the V2 interneurons of the developing mouse spinal cord
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Toshiya Yamada, Melissa H. Little, C. Glenn Begley, Emma Smith, and Murray Hargrave
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Time Factors ,Population ,Fluorescent Antibody Technique ,GATA3 Transcription Factor ,Biology ,Mice ,Proto-Oncogene Proteins ,Basic Helix-Loop-Helix Transcription Factors ,medicine ,Animals ,education ,Transcription factor ,In Situ Hybridization ,T-Cell Acute Lymphocytic Leukemia Protein 1 ,Neurons ,education.field_of_study ,fungi ,Neural tube ,Days post coitum ,GATA3 ,Molecular biology ,Protein Structure, Tertiary ,Cell biology ,DNA-Binding Proteins ,medicine.anatomical_structure ,Microscopy, Fluorescence ,Spinal Cord ,GDF7 ,Trans-Activators ,RNA ,Transcription Factor Gene ,Developmental biology ,Transcription Factors ,Developmental Biology - Abstract
The differentiation of neural progenitors into the many classes of neurons that exist in the mature spinal cord is a process that relies heavily on the activation of precise combinations of transcription factors. Defining these transcription factor combinations is an important aspect of research in developmental neurobiology that promises to provide incredible insights into the structure, function, and pathology of the central nervous system. The present study aimed to investigate a possible role for the Stem Cell Leukemia (SCL) gene, a basic helix-loop-helix (bHLH) transcription factor gene, in the specification of a population of neural cells in the ventral neural tube. Section RNA in situ hybridisation revealed that SCL is transiently expressed within the V2 postmitotic domain of the developing mouse spinal cord between 10.5 and 13.5 days post coitum. Double-immunofluorescence experiments were subsequently carried out to directly compare the expression of SCL with other V2-specific markers at the cellular level. These experiments revealed that SCL is expressed in a medially restricted subpopulation of GATA-3 producing cells, suggesting a possible role for this factor in the differentiation of the GATA population of V2 interneurons. (C) 2002 Wiley-Liss, Inc.
- Published
- 2002
25. Remote Touch Pointing for Smart TV Interaction
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Toshiya Yamada, Takashi Ozeki, Noboru Nakamichi, Keita Watanabe, and Yuta Miyake
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Multimedia ,Point (typography) ,business.industry ,Computer science ,computer.software_genre ,law.invention ,Remote touch ,law ,The Internet ,Line (text file) ,Set (psychology) ,business ,computer ,Remote control - Abstract
Increasing in the size of TV, Smart TV in connected to internet is spreading. Remote-control of TV is complicate by increase of contents. In this research, we propose a Remote Touch TV that is able to operate at a large screen intuitively. Remote Touch TV is a new remote-control method for smart TV using Remote Touch Pointing. Remote Touch Pointing set on the base point and the operating point as part of the body. It points out objective area using the extended line of them. It is start up by a user stands in front of TV. And it power down by moving away from the TV. Menu for selecting the contents is displayed by raising user's hand. The user is able to select an objective content by Pointing and Tap. The operation procedures in remote control and in the Remote Touch TV were compared using the sequence diagrams. As a result, we clarified that the actor element and recognition target are less than the remote-control in the proposal method. Also we clarified to reduce the operational procedure by proposal method.
- Published
- 2014
26. Characterisation ofCrim1 expression in the developing mouse urogenital tract reveals a sexually dimorphic gonadal expression pattern
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Toshiya Yamada, Josephine Bowles, Melissa H. Little, Peter Koopman, and Kylie Georgas
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Male ,animal structures ,Mesenchyme ,Urogenital System ,Kidney development ,Biology ,Kidney ,Proto-Oncogene Proteins c-myc ,Mice ,Pregnancy ,Testis ,medicine ,Animals ,In Situ Hybridization ,Oligonucleotide Array Sequence Analysis ,Genetics ,Sex Characteristics ,Reverse Transcriptase Polymerase Chain Reaction ,Gene Expression Profiling ,Nuclear Proteins ,Proteins ,Sertoli cell ,Immunohistochemistry ,Transmembrane protein ,Cell biology ,Gene expression profiling ,Germ Cells ,medicine.anatomical_structure ,Testis determining factor ,embryonic structures ,Female ,Chordin ,Developmental Biology - Abstract
The Crim1 gene encodes a putative transmembrane protein with an IGF-binding protein motif and multiple chordin-like cysteine-rich repeats. In chordin, such repeats are responsible for its dorsalising activity and for binding to bone morphogenic proteins (BMPs), Crim1 displays a dynamic expression pattern in a variety of developing organs, including the CNS and the lens. We have undertaken a detailed expression pattern analysis of Crim1 in the developing mouse urogenital system. During metanephric development, Crim1 showed expression both in the ureteric tree, the early condensing mesenchyme and distal comma-shaped bodies. As the nephron elongates, Crim1 becomes expressed in the proximal end of the S-shaped bodies. Crim1 also displays a striking male-specific expression pattern in the fetal gonads, its expression strongest in the Sertoli cells of the developing testis. (C) 2000 Wiley-Liss, Inc.
- Published
- 2000
27. Molecular Control Of Cell Type Diversity In The Developing Spinal Cord
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Asanka Karunaratne, Toshiya Yamada, and Murray Hargrave
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Pharmacology ,Nervous system ,medicine.medical_specialty ,Cell type ,Physiology ,Pax genes ,Biology ,Motor neuron ,Spinal cord ,Cell biology ,medicine.anatomical_structure ,Endocrinology ,Physiology (medical) ,GDF7 ,Internal medicine ,Precursor cell ,medicine ,biology.protein ,Sonic hedgehog - Abstract
1, During embryonic development, a diverse array of neurons and glia are generated at specific positions along the dorsoventral and rostro-caudal axes of the spinal cord from a common pool of precursor cells. 2. This cell type diversity can be distinguished by the spatially and temporally coordinated expression of several transcription factors that are also linked to cell type specification at a very early stage of spinal cord development. 3, Recent studies have started to uncover that the generation of cell type diversity in the developing spinal cord. Moreover, distinct cell types in the spinal cord appear to be determined by the spatially and temporally coordinated expression of transcription factors. 4. The expression of these factors also appears to be controlled by gradients of factors expressed by ventral and dorsal midline cells, namely Sonic hedgehog and members of the transforming growth factor-beta family. 5, Changes in the competence of precursor cells and local cell interactions may also play important roles in cell type specification within the developing spinal cord.
- Published
- 1999
28. Sonic Hedgehog Promotes Neuronal Differentiation of Murine Spinal Cord Precursors and Collaborates with Neurotrophin 3 to Induce Islet-1
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Perry F. Bartlett, Mark Murphy, Toshiya Yamada, Renée Dutton, and Ann M. Turnley
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Nervous system ,animal structures ,Spinal neuron ,LIM-Homeodomain Proteins ,Nerve Tissue Proteins ,Chick Embryo ,Nervous System ,Article ,Mice ,Neurotrophin 3 ,medicine ,Sonic Hedgehog Protein ,Animals ,Nerve Growth Factors ,Sonic hedgehog ,Cells, Cultured ,Floor plate ,Homeodomain Proteins ,Neurons ,biology ,Stem Cells ,General Neuroscience ,Neural tube ,Cell Differentiation ,Spinal cord ,medicine.anatomical_structure ,Spinal Cord ,nervous system ,embryonic structures ,Mice, Inbred CBA ,biology.protein ,Neuroscience ,Neural plate ,Transcription Factors - Abstract
Sonic hedgehog (Shh) is strongly implicated in the development of ventral structures in the nervous system. Addition of Sonic hedgehog protein to chick spinal cord explants induces floor plate and motoneuron development. Whether Shh acts directly to induce these cell types or whether their induction is mediated by additional factors is unknown. To further investigate the role of Shh in spinal neuron development, we have used low-density cultures of murine spinal cord precursor cells. Shh stimulated neuronal differentiation; however, it did not increase the proportion of neurons expressing the first postmitotic motoneuron marker Islet-1. Moreover, Shh did induce Islet-1 expression in neural tube explants, suggesting that it acts in combination with neural tube factors to induce motoneurons. Another factor implicated in motoneuron development is neurotrophin 3 (NT3), and when assayed in isolated precursor cultures, it had no effect on Islet-1 expression. However, the combination of N-terminal Shh and NT3 induced Islet-1 expression in the majority of neurons in low-density cultures of caudal intermediate neural plate. Furthermore, in explant cultures, Shh-mediated Islet-1 expression was blocked by an anti-NT3 antibody. Previous studies have shown expression of NT3 in the region of motoneuron differentiation and that spinal fusimotor neurons are lost in NT3 knock-out animals. Taken together, these findings suggest that Shh can act directly on spinal cord precursors to promote neuronal differentiation, but induction of Islet-1 expression is regulated by factors additional to Shh, including NT3.
- Published
- 1999
29. Model for Estimating Annual 98th Percentiles of Daily Mean Nitrogen Dioxide Concentrations from Annual Mean Concentrations near Highways
- Author
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Nodoka Oshiro, Hirofumi Ohnishi, Taisuke Mikami, Hiroyuki Oneyama, and Toshiya Yamada
- Subjects
Percentile ,chemistry.chemical_compound ,chemistry ,Climatology ,Air pollution ,medicine ,Environmental science ,Regression analysis ,Nitrogen dioxide ,medicine.disease_cause - Published
- 1999
30. A NOx conversion model for estimating NO2 concentration near highways
- Author
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Nodoka Oshiro, Seiichi Momose, Hiroyuki Oneyama, Hirofumi Ohnishi, and Toshiya Yamada
- Subjects
Variable (computer science) ,Environmental engineering ,Environmental science ,NOx - Abstract
When a NO2 concentration is estimated near highways, the first step is to estimate a NOx concentration and the second step is to convert the NOx concentration into the NO2 concentration by a NOx conversion model. It is an issue to consider regional characteristics in the model, because the model is prepared by a regressional analysis using data throughout Japan. Then we propose a model near the highways which includes the NOx concentration of regional background as a variable in order to consider the regional characteristics related to the NOx conversion. Details are described below.
- Published
- 1999
31. Distinct but overlapping expression patterns of two vertebrate slit homologs implies functional roles in CNS development and organogenesis
- Author
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Toshiya Yamada, Elizabeth M. Algar, Sunil Raman, Linda M. Burridge, Greg P. Holmes, Kylie Negus, and Melissa H. Little
- Subjects
Central Nervous System ,Male ,Embryology ,Embryo, Nonmammalian ,Molecular Sequence Data ,Urogenital System ,Nerve Tissue Proteins ,Biology ,Cell Line ,SLIT3 ,Mice ,SLIT1 ,Notochord ,SLIT2 ,medicine ,Animals ,Drosophila Proteins ,Humans ,Amino Acid Sequence ,Cloning, Molecular ,In Situ Hybridization ,Floor plate ,Regulation of gene expression ,Genetics ,Expressed Sequence Tags ,Sequence Homology, Amino Acid ,Infant, Newborn ,Brain ,Gene Expression Regulation, Developmental ,Extremities ,Embryo, Mammalian ,Slit ,medicine.anatomical_structure ,Spinal Cord ,Vertebrates ,Intercellular Signaling Peptides and Proteins ,Female ,Neural development ,Sequence Analysis ,Developmental Biology - Abstract
The Drosophila slit gene (sli) encodes a secreted leucine-rich repeat-containing protein (slit) expressed by the midline glial cells and required for normal neural development. A putative human sli homolog, SLIT1, has previously been identified by EST database scanning. We have isolated a second human sli homolog, SLIT2, and its murine homolog Slit2. Both SLIT1 and SLIT2 proteins show approximately 40% amino acid identity to slit and 60% identity to each other. In mice, both genes are expressed during CNS development in the floor plate, roof plate and developing motor neurons. As floor plate represents the vertebrate equivalent to the midline glial cells, we predict a conservation of function for these vertebrate homologs. Each gene shows additional but distinct sites of expression outside the CNS suggesting a variety of functions for these proteins.
- Published
- 1998
- Full Text
- View/download PDF
32. Cloning and expression analysis of a novel mouse gene with sequence similarity to the Drosophila fat facets gene
- Author
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Wendy S. Pascoe, Toshiya Yamada, John S. Mattick, Stephen A. Wood, Rolf Kemler, Jens Hirchenhain, and Kelin Ru
- Subjects
Embryology ,Proteases ,Embryo, Nonmammalian ,X Chromosome ,Transcription, Genetic ,Recombinant Fusion Proteins ,Molecular Sequence Data ,Cell fate determination ,Mouse Protein ,Biology ,Embryonic and Fetal Development ,Mice ,Endopeptidases ,Animals ,Amino Acid Sequence ,Cloning, Molecular ,Gene ,Conserved Sequence ,Crosses, Genetic ,Genetics ,Cloning ,Sequence Homology, Amino Acid ,Stem Cells ,Chromosome Mapping ,Gene Expression Regulation, Developmental ,Embryo, Mammalian ,Embryonic stem cell ,Recombinant Proteins ,USP9X ,Drosophila ,Sequence Alignment ,Ubiquitin Thiolesterase ,Drosophila Protein ,Developmental Biology - Abstract
The Drosophila fat facets (faf) gene is a ubiquitin-specific protease necessary for the normal development of the eye and of the syncytial stage embryo in the fly. Using a gene trap approach in embryonic stem cells we have isolated a murine gene with extensive sequence similarity to the Drosophila faf gene and called it Fam (fat facets in mouse). The putative mouse protein shows colinearity and a high degree of sequence identity to the Drosophila protein over almost its entire length of 2554 amino acids. The two enzymatic sites characteristic of ubiquitin-specific proteases are very highly conserved between mice and Drosophila and this conservation extends to yeast. Fam is expressed in a complex pattern during postimplantation development. In situ hybridisation detected Fam transcripts in the rapidly expanding cell populations of gastrulating and neurulating embryos, in post-mitotic cells of the CNS as well as in the apoptotic regions between the digits, indicating that it is not associated with a single developmental or cellular event. The strong sequence similarity to faf and the developmentally regulated expression pattern suggest that Fam and the ubiquitin pathway may play a role in determining cell fate in mammals, as has been established for Drosophila.
- Published
- 1997
33. Usefulness of EUS-FNA for the diagnosis in metastatic pancreatic tumor
- Author
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Masafumi Mizuide, Ayako Matsui, Yoshiki Tanaka, Hiroko Sato, Takehiro Shimizu, Toshiya Yamada, and Koki Hoshi
- Subjects
medicine.medical_specialty ,Hepatology ,Pancreatic tumor ,business.industry ,Endocrinology, Diabetes and Metabolism ,Gastroenterology ,medicine ,CA19-9 ,Radiology ,medicine.disease ,business - Published
- 2016
34. Control of cell pattern in the neural tube: Motor neuron induction by diffusible factors from notochord and floor plate
- Author
-
Samuel L. Pfaff, Toshiya Yamada, Thomas M. Jessell, and Thomas Edlund
- Subjects
Motor Neurons ,Neural fold ,Base Sequence ,Neural tube patterning ,Molecular Sequence Data ,Notochord ,Neural tube ,Cell Differentiation ,Cell Communication ,Chick Embryo ,Anatomy ,Biology ,Nervous System ,Quail ,General Biochemistry, Genetics and Molecular Biology ,Neurulation ,medicine.anatomical_structure ,embryonic structures ,medicine ,Animals ,Neuroscience ,Neural plate ,Neural cell ,Floor plate - Abstract
The identity of cell types generated along the dorsoventral axis of the neural tube depends on inductive signals that derive from both mesodermal and neural cells. To define the nature of these signals, we have analyzed the differentiation of cells in neural plate explants. Motor neurons and neural crest cells differentiate in vitro from appropriate regions of the neural plate, indicating that the specification of cell fate along the dorsoventral axis of the neural tube begins at the neural plate stage. Motor neuron differentiation can be induced by a diffusible factor that derives initially from the notochord and later from floor plate cells. By contrast, floor plate induction requires contact with the notochord. Thus, the identity and patterning of neural cell types appear to involve distinct contact-mediated and diffusible signals from the notochord and floor plate.
- Published
- 1993
35. Control of cell pattern in the neural tube: Regulation of cell differentiation by dorsalin-1, a novel TGFβ family member
- Author
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Thomas Edlund, Konrad Basler, Thomas M. Jessell, and Toshiya Yamada
- Subjects
Models, Neurological ,Molecular Sequence Data ,Notochord ,Organogenesis ,Chick Embryo ,Biology ,Nervous System ,General Biochemistry, Genetics and Molecular Biology ,Cell Line ,medicine ,Animals ,Amino Acid Sequence ,RNA, Messenger ,Floor plate ,Motor Neurons ,Genetics ,Neural fold ,Base Sequence ,Sequence Homology, Amino Acid ,Neural tube ,Proteins ,Neural crest ,Cell Differentiation ,Cell biology ,medicine.anatomical_structure ,Neurulation ,Neural Crest ,Transforming Growth Factors ,Bone Morphogenetic Proteins ,Neural plate - Abstract
Distinct cell types differentiate along the dorsoventral axis of the neural tube. We have cloned and characterized a novel member of the TGF beta gene family, dorsalin-1 (dsl-1), that appears to regulate cell differentiation within the neural tube. dsl-1 is expressed selectively in the dorsal neural tube, and its pattern of expression appears to be restricted by early signals from the notochord. Exposure of neural plate cells to dsl-1 promotes the differentiation of cells with neural crest-like properties and inhibits the induction of motor neurons by signals from the notochord and floor plate. These findings suggest that dsl-1 regulates the differentiation of cell types along the dorsoventral axis of the neural tube, acting in conjunction with distinct ventralizing signals from the notochord and floor plate.
- Published
- 1993
36. A case of superficial widely spreading carcinoma of the bile duct associated with Gardner’s syndrome
- Author
-
Daisuke Kaburagi, Toshiya Yamada, Yuichi Machiki, Hideki Maruyama, and Kensuke Furuya
- Subjects
medicine.medical_specialty ,Pathology ,business.industry ,Bile duct ,Mechanical Engineering ,General surgery ,Energy Engineering and Power Technology ,Management Science and Operations Research ,medicine.disease ,Gardner's syndrome ,medicine.anatomical_structure ,medicine ,Carcinoma ,business - Published
- 2014
37. Discriminant analysis for detection of low usability web pages
- Author
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Toshiya Yamada, Tomoko Matsui, and Noboru Nakamichi
- Subjects
World Wide Web ,Information retrieval ,Computer science ,business.industry ,Web page ,Usability ,Linear discriminant analysis ,business - Published
- 2010
38. Control of dorsoventral pattern in vertebrate neural development: induction and polarizing properties of the floor plate
- Author
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Marysia Placzek, Thomas M. Jessell, Jane Dodd, Marc Tessier-Lavigne, and Toshiya Yamada
- Subjects
Embryonic Induction ,Motor Neurons ,Nervous system ,Embryogenesis ,Notochord ,Neural tube ,Cell Differentiation ,Chick Embryo ,Biology ,Nervous System ,Cell biology ,Rhombencephalon ,Neuroepithelial cell ,medicine.anatomical_structure ,Neural Crest ,medicine ,Animals ,Molecular Biology ,Neural development ,Developmental Biology ,Floor plate - Abstract
Distinct classes of neural cells differentiate at specific locations within the embryonic vertebrate nervous system. To define the cellular mechanisms that control the identity and pattern of neural cells we have used a combination of functional assays and antigenic markers to examine the differentiation of cells in the developing spinal cord and hindbrain in vivo and in vitro. Our results suggest that a critical step in the dorsoventral patterning of the embryonic CNS is the differentiation of a specialized group of midline neural cells, termed the floor plate, in response to local inductive signals from the underlying notochord. The floor plate and notochord appear to control the pattern of cell types that appear along the dorsoventral axis of the neural tube. The fate of neuroepithelial cells in the ventral neural tube may be defined by cell position with respect to the ventral midline and controlled by polarizing signals that originate from the floor plate and notochord.
- Published
- 1991
39. Control of cell pattern in the developing nervous system: Polarizing activity of the floor plate and notochord
- Author
-
Thomas M. Jessell, Jane Dodd, H. Tanaka, Toshiya Yamada, and Marysia Placzek
- Subjects
Serotonin ,animal structures ,Basal plate (neural tube) ,Notochord ,Chick Embryo ,Coturnix ,Biology ,Nervous System ,General Biochemistry, Genetics and Molecular Biology ,Morphogenesis ,medicine ,Animals ,Neural cell ,Floor plate ,Embryonic Induction ,Motor Neurons ,Neural fold ,Neural tube ,Antibodies, Monoclonal ,Cell Differentiation ,Anatomy ,Cell biology ,Neurulation ,medicine.anatomical_structure ,Spinal Cord ,embryonic structures ,Immunologic Techniques ,Neural plate - Abstract
Individual classes of neural cells differentiate at distinct locations in the developing vertebrate nervous system. We provide evidence that the pattern of cell differentiation along the dorsoventral axis of the chick neural tube is regulated by signals derived from two ventral midline cell groups, the notochord and floor plate. Grafting an additional notochord or floor plate to ectopic positions, or deleting both cell groups, resulted in changes in the fate and position of neural cell types, defined by expression of specific antigens. These results suggest that the differentiation of neural cells is controlled, in part, by their position with respect to the notochord and floor plate.
- Published
- 1991
40. Regulation Of Spinal Motoneuron Differentiation By The Combined Action Of Sonic Hedgehog And Neurotrophin 3
- Author
-
Ann M. Turnley, Mark Murphy, Renée Dutton, Perry F. Bartlett, and Toshiya Yamada
- Subjects
Pharmacology ,animal structures ,Physiology ,Cellular differentiation ,Growth factor ,medicine.medical_treatment ,Neural tube ,Neurotrophin-3 ,Biology ,Spinal cord ,Cell biology ,medicine.anatomical_structure ,nervous system ,Physiology (medical) ,Precursor cell ,embryonic structures ,Immunology ,biology.protein ,medicine ,Sonic hedgehog ,Floor plate - Abstract
1. The development of ventral cell types in the spinal cord, including motor neurons, requires the growth factor Sonic hedgehog (Shh). However, it is still unknown whether Shh acts directly on precursors to induce these cell types and whether additional factors are required for induction. 2. To further investigate the precise role of Shh in spinal motoneuron development, we used low-density cultures of murine spinal cord precursor cells. 3. Although purified Shh stimulated neuronal differentiation, it did not increase the proportion of neurons expressing the motoneuron marker Islet-1 (Isl-1). In contrast, purified Shh induced Isl-1 expression in neural tube explants, suggesting that additional neural tube-derived factors are required to induce motoneuron differentiation. 4. A factor implicated in motoneuron development, neurotrophin 3 (NT3), had no effect on Isl-1 expression; however, in combination with Shh, it induced Isl-1 expression in the majority of neurons in the low-density cultures. Furthermore, in explant cultures, Shh-induced Isl-1 expression was blocked by an anti-NT3 antibody. 5. In addition, previous studies have shown expression of NT3 in the region of motoneuron differentiation and the loss of spinal fusimotor neurons in NT3-knockout animals. 6. Taken together, these findings suggest that Shh can act directly on spinal cord precursors to promote neuronal differentiation, but induction of Isl-1 expression and motor differentiation requires additional factors, including NT3.
- Published
- 1999
41. Mesodermal Control of Neural Cell Identity: Floor Plate Induction by the Notochord
- Author
-
Thomas M. Jessell, Marc Tessier-Lavigne, Marysia Placzek, Toshiya Yamada, and Jane Dodd
- Subjects
Central Nervous System ,animal structures ,Basal plate (neural tube) ,Notochord ,Chick Embryo ,Biology ,Mesoderm ,medicine ,Animals ,Neural cell ,Floor plate ,Embryonic Induction ,Neurons ,Multidisciplinary ,fungi ,Neural tube ,Cell Differentiation ,Anatomy ,Cell biology ,Neuroepithelial cell ,medicine.anatomical_structure ,Neurulation ,Spinal Cord ,embryonic structures ,Neural plate - Abstract
The floor plate is a specialized group of midline neuroepithelial cells that appears to regulate cell differentiation and axonal growth in the developing vertebrate nervous system. A floor plate-specific chemoattractant was used as a marker to examine the role of the notochord in avian floor plate development. Expression of this chemoattractant in lateral cells of the neural plate and neural tube was induced by an ectopic notochord, and midline neural tube cells did not express the chemoattractant after removal of the notochord early in development. These results provide evidence that a local signal from the notochord induces the functional properties of the floor plate.
- Published
- 1990
42. Guidance of Developing Axons by Diffusible Chemoattractants
- Author
-
Marc Tessier-Lavigne, Jane Dodd, Marysia Placzek, Toshiya Yamada, and Thomas M. Jessell
- Subjects
Chemotactic Factors ,Chick Embryo ,Biology ,Nervous System ,Biochemistry ,Axons ,Rats ,Diffusion ,Spinal Cord ,Genetics ,Animals ,Nervous System Physiological Phenomena ,Nerve Growth Factors ,Molecular Biology - Published
- 1990
43. Who cares?
- Author
-
Les Nelson, Elizabeth F. Churchill, Toshiya Yamada, Jonathan Helfman, Jun Shingu, and Paul Murphy
- Subjects
Community building ,Multimedia ,Interface (Java) ,Computer science ,Video capture ,business.industry ,Information sharing ,media_common.quotation_subject ,Digital content ,computer.software_genre ,Metadata ,World Wide Web ,Reading (process) ,business ,computer ,media_common ,Content management - Abstract
In this paper, we describe the YeTi information sharing system that has been designed to foster community building through informal digital content sharing. The YeTi system is a general information parsing, hosting and distribution infrastructure, with interfaces designed for individual and public content reading. In this paper we describe the YeTi public display interface, with a particular focus on tools we have designed to provide lightweight awareness of others' interactions with posted content. Our tools augment content with metadata that reflect people's reading of content - captured video clips of who's reading and interacting with content, tools to allow people to leave explicit freehand annotations about content, and a visualization of the content access history to show when content is interacted with. Results from an initial evaluation are presented and discussed.
- Published
- 2004
44. Conserved modularity and potential for alternate splicing in mouse and human Slit genes
- Author
-
Melissa, Little, Bree, Rumballe, Kylie, Georgas, Toshiya, Yamada, and Rohan D, Teasdale
- Subjects
Expressed Sequence Tags ,DNA, Complementary ,Models, Genetic ,Sequence Homology, Amino Acid ,Molecular Sequence Data ,Chromosome Mapping ,Gene Expression Regulation, Developmental ,Membrane Proteins ,Nerve Tissue Proteins ,Exons ,Polymerase Chain Reaction ,Introns ,Alternative Splicing ,Mice ,Open Reading Frames ,Leucine ,Animals ,Chromosomes, Human, Pair 5 ,Humans ,Intercellular Signaling Peptides and Proteins ,Protein Isoforms ,Amino Acid Sequence ,3' Untranslated Regions ,Gene Library - Abstract
The vertebrate Slit gene family currently consists of three members; Slit1, Slit2 and Slit3. Each gene encodes a protein containing multiple epidermal growth factor and leucine rich repeat motifs, which are likely to have importance in cell-cell interactions. In this study, we sought to fully define and characterise the vertebrate Slit gene family. Using long distance PCR coupled with in silico mapping, we determined the genomic structure of all three Slit genes in mouse and man. Analysis of EST and genomic databases revealed no evidence of further Slit family members in either organism. All three Slit genes were encoded by 36 (Slit3) or 37 (Slit1 and Slit2) exons covering at least 143 kb or 183 kb of mouse or human genomic DNA respectively. Two additional potential leucine-rich repeat encoding exons were identified within intron 12 of Slit2. These could be inserted in frame, suggesting that alternate splicing may occur in Slit2. A search for STS sequences within human Slit3 anchored this gene to D5S2075 at the 5' end (exon 4) and SGC32449 within the 3' UTR, suggesting that Slit3 may cover greater than 693 kb. The genomic structure of all Slit genes demonstrated considerable modularity in the placement of exon-intron boundaries such that individual leucine-rich repeat motifs were encoded by individual 72 bp exons. This further implies the potential generation of multiple Slit protein isoforms varying in their number of repeat units. cDNA library screening and EST database searching verified that such alternate splicing does occur.
- Published
- 2002
45. Patterning of the vertebrate ventral spinal cord
- Author
-
Alisa, Poh, Asanka, Karunaratne, Gabriel, Kolle, Ning, Huang, Emma, Smith, Joanna, Starkey, Daying, Wen, Ian, Wilson, Toshiya, Yamada, and Murray, Hargrave
- Subjects
Neurons ,Time Factors ,Spinal Cord ,Transcription, Genetic ,Trans-Activators ,Animals ,Gene Expression Regulation, Developmental ,Hedgehog Proteins ,Chick Embryo ,Models, Biological ,Protein Structure, Tertiary ,Signal Transduction - Abstract
We review investigations that have lead to a model of how the ventral spinal cord of higher vertebrate embryos is patterned during development. Central to this model is the secreted morphogen protein, Sonic hedgehog. There is now considerable evidence that this molecule acts in a concentration-dependent manner to direct the development of the spinal cord. Recent studies have suggested that two classes of homeodomain proteins are induced by threshold concentrations of Sonic hedgehog. Reciprocal inhibition between the two classes acts to convert the continuous gradient of Sonic hedgehog into defined domains of transcription factor expression. However, a number of aspects of ventral spinal cord patterning remain to be elucidated. Some issues currently under investigation involve temporal aspects of Shh-signalling, the role of other signals in ventral patterning and the characterisation of ventral interneurons. In this review, we discuss the current state of knowledge of these issues and present some preliminary studies aimed at furthering understanding of these processes in spinal cord patterning.
- Published
- 2002
46. 608 Semi-passive Biped Robot using Motion Control Combining Energy and PD Controls
- Author
-
Shingo Okamoto, Toshiya Yamada, and Jae Hoon Lee
- Subjects
Control theory ,Computer science ,Control engineering ,Motion control ,Energy (signal processing) ,Biped robot - Published
- 2014
47. Expression of Crim1 during murine ocular development
- Author
-
Toshiya Yamada, Frank J. Lovicu, Gabriel Kolle, J.W. McAvoy, and Melissa H. Little
- Subjects
Regulation of gene expression ,Embryology ,medicine.medical_specialty ,Morphogenesis ,Gene Expression Regulation, Developmental ,Nuclear Proteins ,Proteins ,Biology ,Fibroblast growth factor ,Bone morphogenetic protein ,Eye ,Cell biology ,Proto-Oncogene Proteins c-myc ,Mice ,medicine.anatomical_structure ,Endocrinology ,Lens (anatomy) ,Internal medicine ,medicine ,Animals ,Lens placode ,Chordin ,Developmental Biology ,Corneal epithelium - Abstract
Crim1 (cysteine-rich motor neuron 1), a novel gene encoding a putative transmembrane protein, has recently been isolated and characterized (Kolle, G., Georgas, K., Holmes, G.P., Little, M.H., Yamada, T., 2000. CRIM1, a novel gene encoding a cysteine-rich repeat protein, is developmentally regulated and implicated in vertebrate CNS development and organogenesis. Mech. Dev. 90, 181-193). Crim1 contains an IGF-binding protein motif and multiple cysteine-rich repeats, analogous to those of chordin and short gastrulation (sog) proteins that associate with TGFbeta superfamily members, namely Bone Morphogenic Protein (BMP). High levels of Crim1 have been detected in the brain, spinal chord and lens. As members of the IGF and TGFbeta growth factor families have been shown to influence the behaviour of lens cells (Chamberlain, C.G., McAvoy, J. W., 1997. Fibre differentiation and polarity in the mammalian lens: a key role for FGF. Prog. Ret. Eye Res. 16, 443-478; de Iongh R.U., Lovicu, F.J., Overbeek, P.A., Schneider, M.D., McAvoy J.W., 1999. TGF-beta signalling is essential for terminal differentiation of lens fibre cells. Invest. Ophthalmol. Vis. Sci. 40, S561), to further understand the role of Crim1 in the lens, its expression during ocular morphogenesis and growth is investigated. Using in situ hybridisation, the expression patterns of Crim1 are determined in murine eyes from embryonic day 9.5 through to postnatal day 21. Low levels of transcripts for Crim1 are first detected in the lens placode. By the lens pit stage, Crim1 is markedly upregulated with high levels persisting throughout embryonic and foetal development. Crim1 is expressed in both lens epithelial and fibre cells. As lens fibres mature in the nucleus, Crim1 is downregulated but strong expression is maintained in the lens epithelium and in the young fibre cells of the lens cortex. Crim1 is also detected in other developing ocular tissues including corneal and conjunctival epithelia, corneal endothelium, retinal pigmented epithelium, ciliary and iridial retinae and ganglion cells. During postnatal development Crim1 expression is restricted to the lens, with strongest expression in the epithelium and in the early differentiating secondary fibres. Thus, strong expression of Crim1 is a distinctive feature of the lens during morphogenesis and postnatal growth.
- Published
- 2000
48. Expression of the vertebrate Slit gene family and their putative receptors, the Robo genes, in the developing murine kidney
- Author
-
Toshiya Yamada, Kylie Georgas, Melissa H. Little, and Michael Piper
- Subjects
Genetics ,Embryology ,Gene Expression Regulation, Developmental ,Nerve Tissue Proteins ,Biology ,Kidney ,Slit ,Cell biology ,SLIT3 ,Mesoderm ,Mice ,Chemorepulsion ,ROBO1 ,SLIT1 ,SLIT2 ,Animals ,Drosophila Proteins ,Intercellular Signaling Peptides and Proteins ,Axon guidance ,Receptors, Immunologic ,Neural development ,Developmental Biology - Abstract
The slit (sli) gene, encoding a secreted glycoprotein, has been demonstrated to play a vital role in axonal guidance in Drosophila melanogaster by acting as a signalling ligand for the robe receptor (Rothberg, J.M., Jacobs, J.R., Goodman, C.S., Artavanis-Tsakonas, S., 1990. slit: an extracellular protein necessary for development of midline glia and commissural axon pathways contains both EGF and LRR domains. Genes Dev. 4, 2169-2187; Kidd, T., Bland, K.S., Goodman, C.S., 1999. Slit is the midline repellent for the robo receptor in Drosophila. Cell 96, 785-794). Multiple homologs of both sli and robe have been identified in vertebrates and are thought to play similar roles to their fly counterparts in neural development (Brose, K., Bland, K.S., Wang, K.H., Arnott, D., Henzel, W., Goodman, C.S., Tessier-Lavigne, M., Kidd, T., 1999. Slit proteins bind Robe receptors and have an evolutionarily conserved role in repulsive axon guidance. Cell 96, 795-806). Slit2 has been shown to bind Robo1, mediating both neuronal and axonal guidance in the developing central nervous system (CNS), (Brose et al., 1999; Hu, H., 1999. Chemorepulsion of neuronal migration by Slit2 in the developing mammalian forebrain. Neuron 23, 703-711). Importantly, both gene families display distinct expression patterns outside the CNS (Holmes, G.P., Negus, K., Burridge, L., Raman, S., Algar, E., Yamada, T., Little, M.H., 1998. Distinct but overlapping expression patterns of two vertebrate slit homologs implies functional roles in CNS development and organogenesis. Mech. Dev. 79, 57-72; Yuan, W., Zhou, L., Chen, J.H., Wu, J.Y., Rao, Y., Ornitz, D.M., 1999. The mouse SLIT family: secreted ligands for ROBO expressed in patterns that suggest a role in morphogenesis and axon guidance. Dev. Biol. 212, 290-306). Using in situ hybridization on metanephric explant cultures and urogenital tract sections, the expression patterns of Slit1, 2, 3 and Robo1 and 2 were investigated during murine metanephric development. Slit1 was expressed in the metanephric mesenchyme (MM) surrounding the invading ureteric tree (UT). Slit2 was expressed at the tips of the UT and both Slit2 and Slid were expressed at the far proximal end of the comma shaped and S-shaped bodies. Expression of Robo1 was initially diffuse throughout the MM, then upregulated in the pretubular aggregates, and maintained at the distal end of the comma and S-shaped bodies. Robo2 was detected in the induced MM surrounding the arborizing UT tips and later in the proximal end of the S-shaped bodies. Coincident expression of Robo1 with Slit1 in the metanephric mesenchyme and Robo2, Slit2 and Slid in the far proximal end of the S-shaped bodies was observed during metanephric development. (C) 2000 Elsevier Science Ireland Ltd. All rights reserved.
- Published
- 2000
49. Sox14 maps to mouse chromosome 9 and shows no mutations in the neurological mouse mutants ducky and tippy
- Author
-
Peter Koopman, Murray Hargrave, Toshiya Yamada, and Kristy M. James
- Subjects
Genetics ,Male ,SOX14 ,Mutant ,High Mobility Group Proteins ,Brain ,Chromosome Mapping ,Gene Expression Regulation, Developmental ,Chromosome 9 ,Biology ,Molecular biology ,Human genetics ,Chromosomes ,Muridae ,Mice ,Mice, Neurologic Mutants ,Gene mapping ,Mutation ,SOXB2 Transcription Factors ,Animals ,Female ,Gene ,Crosses, Genetic ,In Situ Hybridization - Published
- 2000
50. CRIM1, a novel gene encoding a cysteine-rich repeat protein, is developmentally regulated and implicated in vertebrate CNS development and organogenesis
- Author
-
Toshiya Yamada, G. P. Holmes, Kylie Georgas, Gabriel Kolle, and Melissa H. Little
- Subjects
Adult ,Embryology ,Molecular Sequence Data ,Restriction Mapping ,Organogenesis ,Conserved sequence ,Evolution, Molecular ,Proto-Oncogene Proteins c-myc ,Mice ,Notochord ,medicine ,Animals ,Humans ,Tissue Distribution ,Amino Acid Sequence ,RNA, Messenger ,Sonic hedgehog ,Conserved Sequence ,In Situ Hybridization ,Floor plate ,Genetics ,Regulation of gene expression ,biology ,Sequence Homology, Amino Acid ,Brain ,Gene Expression Regulation, Developmental ,Membrane Proteins ,Nuclear Proteins ,Proteins ,Bone Morphogenetic Protein Receptors ,Blotting, Northern ,Invertebrates ,Transmembrane protein ,medicine.anatomical_structure ,Spinal Cord ,Chromosomes, Human, Pair 2 ,Vertebrates ,biology.protein ,Female ,Chordin ,Developmental Biology - Abstract
Development of the vertebrate central nervous system is thought to be controlled by intricate cell-cell interactions and spatio-temporally regulated gene expressions. The details of these processes are still not fully understood. We have isolated a novel vertebrate gene, CRIM1/Crim1, in human and mouse. Human CRIM1 maps to chromosome 2p21 close to the Spastic Paraplegia 4 locus. Crim1 is expressed in the notochord, somites, floor plate, early motor neurons and interneuron subpopulations within the developing spinal cord. CRIM1 appears to be evolutionarily conserved and encodes a putative transmembrane protein containing an IGF-binding protein motif and multiple cysteine-rich repeats similar to those in the BMP-associating chordin and sog proteins. Our results suggest a role for CRIM1/Crim1 in CNS development possibly via growth factor binding.
- Published
- 2000
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