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This thesis was scanned from the print manuscript for digital preservation and is copyright the author. Researchers can access this thesis by asking their local university, institution or public library to make a request on their behalf. Monash staff and postgraduate students can use the link in the References field.

We provide a description of the Epidemics on Networks (EoN) python package designed for studying disease spread in static networks. The package consists of over $100$ methods available for users to perform stochastic simulation of a range of different processes including SIS and SIR disease, and generic simple or comlex contagions., Comment: This paper is available in a shorter form without examples at https://joss.theoj.org/papers/10.21105/joss.01731.pdf